From 4f8c3915dfde0a18e009aee5bec78b7577039f39 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Tue, 8 Apr 2025 16:39:36 -0400
Subject: [PATCH 01/37] Define the w-correlation matrix in the manual

---
 topics/ssa.rst | 132 ++++++++++++++++++++++++++++---------------------
 1 file changed, 75 insertions(+), 57 deletions(-)

diff --git a/topics/ssa.rst b/topics/ssa.rst
index 48796ac..e4cb85f 100644
--- a/topics/ssa.rst
+++ b/topics/ssa.rst
@@ -235,16 +235,30 @@ Thus, graphs of eigenvectors or discrete Fourier transforms can help
 identify like components.
 
 Very helpful information for separation is contained in the so-called
-:math:`\mathbf{W}`-correlation matrix. This is the matrix consisting of
-weighted correlations between the reconstructed time series
-components. The weights reflects the number of entries of the time
-series terms into its trajectory matrix. Well separated components
-have small correlation whereas badly separated components have large
-correlation. Therefore, looking at the :math:`\mathbf{W}`-correlation
-matrix one can find groups of correlated elementary reconstructed
-series and use this information for the consequent grouping. One of
-the rules is not to include into different groups the correlated
-components.
+weighted correlation matrix, w-correlation matrix for short. This is
+the matrix consisting of weighted correlations between the
+reconstructed time series components.  Let :math:`\mathbf{A},
+\mathbf{B}` be trajectory matrices constructed from series :math:`a_i,
+b_i, i=1,\ldots,N`.  Recall that the trajectory matrix has duplicated
+entries with respect to the original series.  The _weight_ reflects
+the number of entries of the time series terms into its trajectory
+matrix.  Define :math:`(\mathbf{A}, \mathbf{B}) := \sum_{ij} A_{ij}
+B_{ij})`. This defines a scalar product in a linear space of the
+original rank of the input series which is _weighted_.  Let
+:math:`\mathbf{A}^k` be the trajectory matrix reconstructed from PC
+:math:`k`.  We define the elements of the w-correlation matrix to be
+
+.. math::
+   \mbox{wCorr}_{\mu\nu} = \frac{(\mathbf{A}^\mu, \mathbf{B}^\nu)}
+   {\sqrt{(\mathbf{A}^\mu , \mathbf{A}^\mu)(\mathbf{B}^\nu, \mathbf{B}^\nu)}}.
+
+Well separated components have small correlation whereas badly
+separated components have large correlation. The diagonal values
+:math:\mbox`{wCorr}_{ii}=1` by construction. Therefore, looking at the
+off-diagonal contributions of w-correlation matrix, one can find
+groups of correlated elementary reconstructed series and use this
+information for the consequent grouping. One of the rules is not to
+include into different groups the correlated components.
 
 Multichannel SSA (M-SSA)
 ------------------------
@@ -358,9 +372,10 @@ Applications of mSSA
 
 .. index:: pair: singular spectrum analysis; applications
 
-- *Compression.* In many cases, a small number of
-    eigenpairs relative to the total number :math:`MK` have the lion's
-    share of the variance; that is:
+- **Compression**
+
+  In many cases, a small number of eigenpairs relative to the total
+  number :math:`MK` have the lion's share of the variance; that is:
 
     .. math::
        \frac{\sum_{k=1}^d\lambda_k}{\sum_{k=1}^{MK}\lambda_k} \approx 1
@@ -368,48 +383,51 @@ Applications of mSSA
     for :math:`d\ll MK`.  Therefore, we can reconstruct most of the
     dynamics with a small number of eigenpairs.
 
-- *Diagnostics.*  Similarly, we can use the
-      :math:`\tilde{a}_{m,i}^{I_j}` to reconstruct the underlying
-      potential or density fields in physical space using the standard
-      BFE series.
-
-- *Channel contributions.* One can use the reconstructions to an
-      estimate of the fraction of each coefficient in any particular
-      eigenpair or group.  Specifically, let us measure the
-      contribution of the :math:`k\mbox{th}` eigenpair to the
-      :math:`j\mbox{th}` coefficient by:
-
-      .. math::
-	 f^k_j \equiv \frac{||\tilde{\mathbf{a}}^k_j||_F}{||\mathbf{a}_j||_F},
-
-      where the Frobenius norm :math:`||\cdot||_F` is equivalent to
-      the Euclidean norm in this context: :math:`||\mathbf{x}||_F =
-      \sqrt{\mathbf{x}\cdot\mathbf{x}}`.  By definition
-      :math:`0<f^k_j<1` and :math:`\sum_k f^k_j=1`. Thus,
-      :math:`f^k_j` tells us the fraction of time series :math:`j`
-      that is in principal component :math:`k`.  Alternatively, we
-      compute measure:
-
-      .. math::
-	 g^k_j \equiv \frac{||\tilde{\mathbf{a}}^k_j||_F}{\sum_{j=1}^M||\mathbf{a}^k_j||_F},
-
-      which is the fraction of principal component in
-      series :math:`j`.  Thus, the histogram :math:`g^k_j` reflects
-      the partitioning of power in the principal component :math:`k`
-      into the input coefficient channels :math:`j`.
-
-      So, we can think of this representation as a single matrix,
-      normed on rows in the case of :math:`f` and normed on columns in the
-      case of :math:`g`.
-
-      In both cases, the norm over the time series may be restricted
-      to some window smaller than the total time series.
-
-- *Dynamical correlations.* This application is motivated by the
-      structure of the biorthogonal expansion described in
-      :ref:`theory <bfetheory>`.  For example, we have found
-      (Petersen et al. 2019c) that strong perturbations couple
-      harmonic subspaces that would be uncoupled at linear order.  By
-      selecting particular coefficients from various harmonics
-      (:math:`m=1, 2` in our case), we can look for the joint mode.
+- **Diagnostics**
+
+  Similarly, we can use the :math:`\tilde{a}_{m,i}^{I_j}` to
+  reconstruct the underlying potential or density fields in physical
+  space using the standard BFE series.
+
+- **Channel contributions**
+
+  One can use the reconstructions to an estimate of the fraction of
+  each coefficient in any particular eigenpair or group.
+  Specifically, let us measure the contribution of the
+  :math:`k\mbox{th}` eigenpair to the :math:`j\mbox{th}` coefficient
+  by:
+
+  .. math::
+     f^k_j \equiv \frac{||\tilde{\mathbf{a}}^k_j||_F}{||\mathbf{a}_j||_F},
+
+  where the Frobenius norm :math:`||\cdot||_F` is equivalent to the
+  Euclidean norm in this context: :math:`||\mathbf{x}||_F =
+  \sqrt{\mathbf{x}\cdot\mathbf{x}}`.  By definition :math:`0<f^k_j<1`
+  and :math:`\sum_k f^k_j=1`. Thus, :math:`f^k_j` tells us the
+  fraction of time series :math:`j` that is in principal component
+  :math:`k`.  Alternatively, we compute measure:
+
+  .. math::
+     g^k_j \equiv \frac{||\tilde{\mathbf{a}}^k_j||_F}{\sum_{j=1}^M||\mathbf{a}^k_j||_F},
+
+  which is the fraction of principal component in series :math:`j`.
+  Thus, the histogram :math:`g^k_j` reflects the partitioning of power
+  in the principal component :math:`k` into the input coefficient
+  channels :math:`j`.
+
+  So, we can think of this representation as a single matrix, normed
+  on rows in the case of :math:`f` and normed on columns in the case
+  of :math:`g`.
+
+  In both cases, the norm over the time series may be restricted to
+  some window smaller than the total time series.
+
+- **Dynamical correlations**
+
+  This application is motivated by the structure of the biorthogonal
+  expansion described in :ref:`theory <bfetheory>`.  For example, we
+  have found (Petersen et al. 2019c) that strong perturbations couple
+  harmonic subspaces that would be uncoupled at linear order.  By
+  selecting particular coefficients from various harmonics
+  (:math:`m=1, 2` in our case), we can look for the joint mode.
 

From 6c9c827c4d9724014a4d32c5ac8f2ebc39e24b51 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 18 Apr 2025 15:42:37 -0400
Subject: [PATCH 02/37] Fix typo in reconstruction summation

---
 topics/bfetheory.rst | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/topics/bfetheory.rst b/topics/bfetheory.rst
index 749ad10..7026792 100644
--- a/topics/bfetheory.rst
+++ b/topics/bfetheory.rst
@@ -53,9 +53,9 @@ Then, approximations for the density and potential fields are
 
 .. math::
    \text{density:}\qquad
-   \hat{\rho}(\mathbf{x}) &= \sum_{j=1}^n a_i d_j(\mathbf{x}), \\
+   \hat{\rho}(\mathbf{x}) &= \sum_{j=1}^n a_j d_j(\mathbf{x}), \\
    \text{potential:}\qquad
-   \hat{\Phi}(\mathbf{x}) &= \sum_{j=1}^n a_i p_j(\mathbf{x}),
+   \hat{\Phi}(\mathbf{x}) &= \sum_{j=1}^n a_j p_j(\mathbf{x}),
 
 where
 

From faaf91ae641a91d5a2d4402fdf13a469c9c0e197 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 18 Apr 2025 16:10:40 -0400
Subject: [PATCH 03/37] Add some clarifcation on EOF construction

---
 topics/bfetheory.rst | 11 +++++++----
 1 file changed, 7 insertions(+), 4 deletions(-)

diff --git a/topics/bfetheory.rst b/topics/bfetheory.rst
index 7026792..1b3ba4a 100644
--- a/topics/bfetheory.rst
+++ b/topics/bfetheory.rst
@@ -185,10 +185,13 @@ coordinates.  The second equation shows the approximation for
 
 
 The covariance of the coefficient given the density :math:`\rho(R,
-z)`, :math:`\mbox{cov}(\mathbf{a})`, is constructed similarly.  The
-covariance matrix describes which terms :math:`a_{lm}^j` contribute
-the most variance.  By diagonalizing :math:`\mbox{cov}(\mathbf{a}),`
-we may find a new basis, uncorrelated by the target density.  Because
+z)`, :math:`\mbox{cov}(\mathbf{a})`, is constructed similarly. For
+each azimuthal harmonic :math:`m`, all spherical terms :math:`l\ge m`
+and radial indices :math:`j` are covariant.  So the full matrix may be
+separated into blocks for each :math:`m`.  Each covariance matrix
+describes which terms :math:`a_{lm}^j` contribute the most variance.
+By diagonalizing :math:`\mbox{cov}(\mathbf{a}),` we may find a new
+basis, uncorrelated by the target density.  Because
 :math:`\mbox{cov}(\mathbf{a})` is symmetric and positive definite, all
 eigenvalues will be positive.  The term with the largest eigenvalue
 describes the majority of the correlated contribution, and so on for

From 6221e3a81f50118258b70127801e8ba8a023e89f Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 18 Apr 2025 16:15:11 -0400
Subject: [PATCH 04/37] More minor edits

---
 topics/bfetheory.rst | 23 ++++++++++++-----------
 1 file changed, 12 insertions(+), 11 deletions(-)

diff --git a/topics/bfetheory.rst b/topics/bfetheory.rst
index 1b3ba4a..bb02d25 100644
--- a/topics/bfetheory.rst
+++ b/topics/bfetheory.rst
@@ -188,17 +188,18 @@ The covariance of the coefficient given the density :math:`\rho(R,
 z)`, :math:`\mbox{cov}(\mathbf{a})`, is constructed similarly. For
 each azimuthal harmonic :math:`m`, all spherical terms :math:`l\ge m`
 and radial indices :math:`j` are covariant.  So the full matrix may be
-separated into blocks for each :math:`m`.  Each covariance matrix
-describes which terms :math:`a_{lm}^j` contribute the most variance.
-By diagonalizing :math:`\mbox{cov}(\mathbf{a}),` we may find a new
-basis, uncorrelated by the target density.  Because
-:math:`\mbox{cov}(\mathbf{a})` is symmetric and positive definite, all
-eigenvalues will be positive.  The term with the largest eigenvalue
-describes the majority of the correlated contribution, and so on for
-the second largest eigenvalue, etc.  EXP performs this diagonalization
-using the singular value decomposition (SVD) and the singular matrices
-(now mutual transposes owing to symmetry) describe a rotation of the
-original basis into the uncorrelated basis.
+separated into blocks for each :math:`m`.  Each block in the
+covariance matrix describes which terms :math:`a_{lm}^j` contribute
+the most variance for a particular :math:`m`. By diagonalizing
+:math:`\mbox{cov}(\mathbf{a}),` we may find a new basis, uncorrelated
+by the target density.  Because :math:`\mbox{cov}(\mathbf{a})` is
+symmetric and positive definite, all eigenvalues will be positive.
+The term with the largest eigenvalue describes the majority of the
+correlated contribution, and so on for the second largest eigenvalue,
+etc.  EXP performs this diagonalization using the singular value
+decomposition (SVD) and the singular matrices (now mutual transposes
+owing to symmetry) describe a rotation of the original basis into the
+uncorrelated basis.
 
 The new basis functions optimally approximate the true distribution
 from the spherical-harmonic expansion in the original basis in the

From aecfab8204f3fe2af52486ad4251cd64a3ed54ad Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Wed, 23 Jul 2025 17:38:15 -0400
Subject: [PATCH 05/37] Use git clone to generate doxygen xml tags

---
 conf.py                                       |   27 +-
 doxyxml/Doxyfile.xml                          |  361 -
 doxyxml/_add_disk_8_h.xml                     |  204 -
 doxyxml/_add_spheres_8_h.xml                  |  185 -
 doxyxml/_ascii_histo_8_h.xml                  |  224 -
 doxyxml/_axisymmetric_basis_8_h.xml           |  372 -
 doxyxml/_b_n_8_h.xml                          |  146 -
 doxyxml/_b_w_helper_8_h.xml                   |  102 -
 doxyxml/_barrier_wrapper_8_h.xml              |  508 --
 doxyxml/_basis_8_h.xml                        |  286 -
 doxyxml/_bess_8_h.xml                         |   87 -
 doxyxml/_bessel_8_h.xml                       |  293 -
 doxyxml/_biorth_cube_8_h.xml                  |  370 -
 doxyxml/_biorth_cyl_8_h.xml                   |  512 --
 doxyxml/_c_b_disk_8_h.xml                     |  472 -
 doxyxml/_cauchy_p_v_8_h.xml                   |  146 -
 doxyxml/_center_file_8_h.xml                  |  243 -
 doxyxml/_circular_8_h.xml                     |  369 -
 doxyxml/_coefs_8_h.xml                        |  113 -
 doxyxml/_color_gradient_8_h.xml               |  127 -
 doxyxml/_component_8_h.xml                    | 1298 ---
 doxyxml/_component_container_8_h.xml          |  610 --
 doxyxml/_cspline_8_h.xml                      |  177 -
 doxyxml/_cube_8_h.xml                         |  322 -
 doxyxml/_cyl_disk_8_h.xml                     |  424 -
 doxyxml/_cyl_e_x_p_8_h.xml                    |  749 --
 doxyxml/_cyl_two_d_8_h.xml                    |  980 --
 doxyxml/_cylinder_8_h.xml                     | 1017 ---
 doxyxml/_data_grid_8_h.xml                    |  176 -
 doxyxml/_direct_8_h.xml                       |  325 -
 doxyxml/_disk2d_8_h.xml                       |  434 -
 doxyxml/_disk2d_halo_8_h.xml                  |  836 --
 doxyxml/_disk_density_func_8_h.xml            |   87 -
 doxyxml/_disk_eval_8_h.xml                    |  524 --
 doxyxml/_disk_halo_8_h.xml                    |  712 --
 doxyxml/_disk_models_8_h.xml                  |  594 --
 doxyxml/_disk_with_halo_8_h.xml               |  551 --
 doxyxml/_e_jcom_8_h.xml                       |  803 --
 doxyxml/_e_x_p_exception_8_h.xml              |  466 -
 doxyxml/_e_x_pini_8_h.xml                     |  335 -
 doxyxml/_e_x_pmath_8_h.xml                    |  118 -
 doxyxml/_ellip_force_8_h.xml                  |  153 -
 doxyxml/_ellipsoid_force_8_h.xml              |  195 -
 doxyxml/_emp_cyl2d_8_h.xml                    |  663 --
 doxyxml/_emp_cyl_s_l_8_h.xml                  | 1267 ---
 doxyxml/_enum_bitset_8_h.xml                  |  105 -
 doxyxml/_external_collection_8_h.xml          |  552 --
 doxyxml/_external_force_8_h.xml               |  592 --
 doxyxml/_file_utils_8_h.xml                   |   74 -
 doxyxml/_find_orb_8_h.xml                     |   75 -
 doxyxml/_flat_disk_8_h.xml                    |  498 --
 doxyxml/_func1d_8_h.xml                       |   28 -
 doxyxml/_gen_poly_8_h.xml                     |  200 -
 doxyxml/_grav_kernel_8_h.xml                  |   96 -
 doxyxml/_grid2_d_8_h.xml                      |  161 -
 doxyxml/_halo_bulge_8_h.xml                   |  453 -
 doxyxml/_hankel_8_h.xml                       |  114 -
 doxyxml/_hunter_x_8_h.xml                     |  241 -
 doxyxml/_init_container_8_h.xml               |  165 -
 doxyxml/_iterable_8_h.xml                     |   66 -
 doxyxml/_k_dtree_8_h.xml                      |  407 -
 doxyxml/_make_model_8_h.xml                   |  191 -
 doxyxml/_mixture_basis_8_h.xml                |  824 --
 doxyxml/_monot_cubic_interpolator_8_h.xml     |  632 --
 doxyxml/_n_v_t_x_8_h.xml                      |  155 -
 doxyxml/_no_force_8_h.xml                     |  128 -
 doxyxml/_orb_trace_8_h.xml                    |   73 -
 doxyxml/_orient_8_h.xml                       |  443 -
 doxyxml/_ortho_function_8_h.xml               |  160 -
 doxyxml/_ortho_poly_8_h.xml                   |  250 -
 doxyxml/_out_ascii_8_h.xml                    |  440 -
 doxyxml/_out_c_h_k_p_t_8_h.xml                |   59 -
 doxyxml/_out_c_h_k_p_t_q_8_h.xml              |  101 -
 doxyxml/_out_calbr_8_h.xml                    |  450 -
 doxyxml/_out_coef_8_h.xml                     |   61 -
 doxyxml/_out_diag_8_h.xml                     |   65 -
 doxyxml/_out_frac_8_h.xml                     |  445 -
 doxyxml/_out_log_8_h.xml                      |   86 -
 doxyxml/_out_multi_8_h.xml                    |   59 -
 doxyxml/_out_p_s_8_h.xml                      |   59 -
 doxyxml/_out_p_s_n_8_h.xml                    |   59 -
 doxyxml/_out_p_s_p_8_h.xml                    |   60 -
 doxyxml/_out_p_s_q_8_h.xml                    |   59 -
 doxyxml/_out_p_s_r_8_h.xml                    |   61 -
 doxyxml/_out_relaxation_8_h.xml               |  103 -
 doxyxml/_out_vel_8_h.xml                      |  538 --
 doxyxml/_output_8_h.xml                       |  221 -
 doxyxml/_output_container_8_h.xml             |  117 -
 doxyxml/_p2_quantile_8_h.xml                  |  143 -
 doxyxml/_p_s_p2_8_h.xml                       |  516 --
 doxyxml/_p_s_p_8_h.xml                        |  529 --
 doxyxml/_particle_ferry_8_h.xml               |  313 -
 doxyxml/_particle_reader_8_h.xml              |  661 --
 doxyxml/_periodic_b_c_8_h.xml                 |  492 -
 doxyxml/_polar_basis_8_h.xml                  |  847 --
 doxyxml/_pot_accel_8_h.xml                    |  575 --
 doxyxml/_pot_r_z_8_h.xml                      |  212 -
 doxyxml/_progress_8_h.xml                     |  134 -
 doxyxml/_pseudo_accel_8_h.xml                 |  335 -
 doxyxml/_q_d_h_t_8_h.xml                      |  133 -
 doxyxml/_q_p_dist_f_8_h.xml                   |  586 --
 doxyxml/_quad_l_s_8_h.xml                     |  298 -
 doxyxml/_r_k4_8_h.xml                         |   66 -
 doxyxml/_running_time_8_h.xml                 |  128 -
 doxyxml/_s_l_grid_m_p2_8_h.xml                |  723 --
 doxyxml/_s_particle_8_h.xml                   |  126 -
 doxyxml/_scatter_m_f_p_8_h.xml                |  501 --
 doxyxml/_shells_8_h.xml                       |  675 --
 doxyxml/_sim_ann_8_h.xml                      |  193 -
 doxyxml/_slab_s_l_8_h.xml                     |  488 -
 doxyxml/_snap_batch_8_h.xml                   |  143 -
 doxyxml/_species_8_h.xml                      |  386 -
 doxyxml/_sph_s_l_8_h.xml                      |  362 -
 doxyxml/_sphere_8_h.xml                       |  471 -
 doxyxml/_spherical_basis_8_h.xml              |  523 --
 doxyxml/_spherical_s_l_8_h.xml                |  383 -
 doxyxml/_spline_8_h.xml                       |  455 -
 doxyxml/_stats_m_p_i_8_h.xml                  |  162 -
 doxyxml/_string_tok_8_h.xml                   |  396 -
 doxyxml/_sutils_8_h.xml                       |  311 -
 doxyxml/_swap_8_h.xml                         |   56 -
 doxyxml/_table_grid_8_h.xml                   |  122 -
 doxyxml/_temp_file_8_h.xml                    |  120 -
 doxyxml/_three_d_grid_8_h.xml                 |  186 -
 doxyxml/_timer_8_h.xml                        |  386 -
 doxyxml/_transform_f_f_t_8_h.xml              |   79 -
 doxyxml/_two_center_8_h.xml                   |  912 --
 doxyxml/_two_d_coefs_8_h.xml                  |  137 -
 doxyxml/_user_bar_8_h.xml                     |  486 -
 doxyxml/_user_disk_8_h.xml                    |  490 -
 doxyxml/_user_halo_8_h.xml                    |  481 -
 doxyxml/_user_log_pot_8_h.xml                 |  475 -
 doxyxml/_user_m_ndisk_8_h.xml                 |  480 -
 doxyxml/_user_m_w_8_h.xml                     |  586 --
 doxyxml/_user_test_8_h.xml                    |  443 -
 doxyxml/_user_test_cuda_8_h.xml               |  431 -
 doxyxml/_vtk_grid_8_h.xml                     |  205 -
 doxyxml/_vtk_p_c_a_8_h.xml                    |  239 -
 doxyxml/_yaml_check_8_h.xml                   |  352 -
 doxyxml/_yaml_config_8_h.xml                  |  228 -
 doxyxml/_z_brent_8_h.xml                      |  208 -
 doxyxml/atomic__constants_8_h.xml             |  302 -
 doxyxml/biorth1d_8_h.xml                      |  188 -
 doxyxml/biorth2d_8_h.xml                      |  195 -
 doxyxml/biorth_8_h.xml                        |  563 --
 doxyxml/biorth__wake_8_h.xml                  |  166 -
 doxyxml/chk_timer_8_h.xml                     |  290 -
 doxyxml/circular__buffer_8_h.xml              |  599 --
 doxyxml/class_add_disk.xml                    |  229 -
 doxyxml/class_add_spheres.xml                 |  229 -
 doxyxml/class_ascii_histo.xml                 |  279 -
 doxyxml/class_axi_sym_biorth.xml              |  568 --
 doxyxml/class_axi_sym_model.xml               | 1660 ----
 doxyxml/class_axi_sym_model_1_1_w_rgrid.xml   |   46 -
 doxyxml/class_axisymmetric_basis.xml          | 1474 ---
 doxyxml/class_b_s_disk.xml                    |  621 --
 doxyxml/class_b_s_sphere.xml                  |  628 --
 doxyxml/class_b_w_data.xml                    |  207 -
 doxyxml/class_bad_index_exception.xml         |  112 -
 doxyxml/class_barrier_wrapper.xml             |  747 --
 doxyxml/class_basis.xml                       |  527 --
 doxyxml/class_bess.xml                        |  258 -
 doxyxml/class_bessel.xml                      | 1105 ---
 doxyxml/class_bessel_1_1_r_grid.xml           |   61 -
 doxyxml/class_bessel_1_1_roots.xml            |  108 -
 doxyxml/class_biorth.xml                      |  286 -
 doxyxml/class_biorth_cube.xml                 |  392 -
 doxyxml/class_biorth_cyl.xml                  | 1617 ----
 doxyxml/class_biorth_grid.xml                 |  730 --
 doxyxml/class_biorth_wake.xml                 | 1032 ---
 doxyxml/class_c_b_disk.xml                    | 1742 ----
 doxyxml/class_c_b_sphere.xml                  |  494 -
 doxyxml/class_c_poly.xml                      |  490 -
 doxyxml/class_cache.xml                       |  131 -
 doxyxml/class_center_file.xml                 |   91 -
 doxyxml/class_cheb1.xml                       |  230 -
 doxyxml/class_cheb2.xml                       |  230 -
 doxyxml/class_cheby1d.xml                     |  722 --
 doxyxml/class_checkpoint_timer.xml            |  289 -
 doxyxml/class_color_gradient.xml              |  204 -
 doxyxml/class_component.xml                   | 4221 ---------
 doxyxml/class_component_container.xml         |  933 --
 doxyxml/class_component_header.xml            |  271 -
 doxyxml/class_cspline.xml                     |  206 -
 doxyxml/class_cspline_1_1_element.xml         |  225 -
 doxyxml/class_cube.xml                        |  875 --
 doxyxml/class_cube_1_1exe_timer.xml           |  263 -
 doxyxml/class_cubic___table.xml               |  395 -
 doxyxml/class_cyclic_iterator.xml             |  348 -
 doxyxml/class_cyl_disk.xml                    |  763 --
 doxyxml/class_cyl_e_x_p.xml                   |  754 --
 doxyxml/class_cylinder.xml                    | 4020 ---------
 doxyxml/class_data_grid.xml                   |  189 -
 doxyxml/class_direct.xml                      |  806 --
 doxyxml/class_disk2d.xml                      | 1055 ---
 doxyxml/class_disk2d_halo.xml                 | 2413 -----
 doxyxml/class_disk2d_halo_1_1_c_lin.xml       |   80 -
 doxyxml/class_disk2d_halo_1_1_c_log.xml       |   80 -
 doxyxml/class_disk2d_halo_1_1_c_map.xml       |   86 -
 doxyxml/class_disk2d_halo_1_1_c_rat.xml       |  139 -
 doxyxml/class_disk2d_halo_1_1_gen_phi.xml     |  265 -
 doxyxml/class_disk2d_halo_exception.xml       |   66 -
 doxyxml/class_disk_eval.xml                   |  583 --
 doxyxml/class_disk_halo.xml                   | 2485 ------
 doxyxml/class_disk_halo_1_1_c_lin.xml         |   80 -
 doxyxml/class_disk_halo_1_1_c_log.xml         |   80 -
 doxyxml/class_disk_halo_1_1_c_map.xml         |   86 -
 doxyxml/class_disk_halo_1_1_c_rat.xml         |  139 -
 doxyxml/class_disk_halo_exception.xml         |   66 -
 doxyxml/class_disk_with_halo.xml              |  625 --
 doxyxml/class_double_exponential.xml          |  252 -
 doxyxml/class_dynamic2d_array.xml             |  153 -
 doxyxml/class_dynamic3d_array.xml             |  159 -
 doxyxml/class_e_jcom.xml                      |  358 -
 doxyxml/class_e_l3.xml                        |  154 -
 doxyxml/class_e_x_p_exception.xml             |  487 -
 doxyxml/class_ellip_force.xml                 |  359 -
 doxyxml/class_ellipsoid_force.xml             |  976 --
 doxyxml/class_embedded_disk_model.xml         |  791 --
 doxyxml/class_emp_cyl2d.xml                   | 1152 ---
 doxyxml/class_emp_cyl2d_1_1_basis2d.xml       |  174 -
 doxyxml/class_emp_cyl2d_1_1_expon_cyl.xml     |  196 -
 doxyxml/class_emp_cyl2d_1_1_kuzmin_cyl.xml    |  171 -
 doxyxml/class_emp_cyl2d_1_1_mapping.xml       |  149 -
 doxyxml/class_emp_cyl2d_1_1_mestel_cyl.xml    |  201 -
 doxyxml/class_emp_cyl2d_1_1_model_cyl.xml     |  175 -
 doxyxml/class_emp_cyl2d_1_1_zang_cyl.xml      |  380 -
 doxyxml/class_emp_cyl_s_l.xml                 | 5594 ------------
 doxyxml/class_emp_cyl_s_l_1_1_axi_disk.xml    |  256 -
 doxyxml/class_emp_cyl_s_l_1_1_p_c_abasis.xml  |  122 -
 .../class_emp_cyl_s_l_1_1_p_c_aelement.xml    |  147 -
 doxyxml/class_ensemble.xml                    |  778 --
 doxyxml/class_enum_bitset.xml                 |  261 -
 doxyxml/class_exponential.xml                 |  149 -
 doxyxml/class_exponential_disk.xml            |  545 --
 doxyxml/class_external_collection.xml         |  205 -
 doxyxml/class_external_force.xml              |  473 -
 doxyxml/class_f_d_i_s_t.xml                   |  156 -
 doxyxml/class_f_d_i_s_t_c.xml                 |  175 -
 doxyxml/class_f_e_e_d.xml                     |  241 -
 doxyxml/class_ferrers.xml                     |  171 -
 doxyxml/class_file_create_error.xml           |  154 -
 doxyxml/class_file_open_error.xml             |  154 -
 doxyxml/class_find_orb.xml                    |  439 -
 doxyxml/class_flat_disk.xml                   | 1303 ---
 doxyxml/class_frame___rotation.xml            |  114 -
 doxyxml/class_func1d.xml                      |   49 -
 doxyxml/class_gauss_quad.xml                  |  328 -
 doxyxml/class_gen_lagu.xml                    |  258 -
 doxyxml/class_generalized_polytrope.xml       |  584 --
 doxyxml/class_generic_error.xml               |  108 -
 doxyxml/class_grid2_d.xml                     |  319 -
 doxyxml/class_h_q_sphere.xml                  |  494 -
 doxyxml/class_halo_bulge.xml                  |  453 -
 doxyxml/class_hankel_transform.xml            |  362 -
 doxyxml/class_herm_quad.xml                   |   81 -
 doxyxml/class_hermite.xml                     |  230 -
 doxyxml/class_hernquist.xml                   |  149 -
 doxyxml/class_hernquist_sphere.xml            |  559 --
 doxyxml/class_hunter_disk.xml                 | 1136 ---
 doxyxml/class_hunter_disk_x.xml               |  669 --
 doxyxml/class_icont.xml                       |   96 -
 doxyxml/class_info.xml                        |  294 -
 doxyxml/class_interaction.xml                 |  132 -
 doxyxml/class_internal_error.xml              |  145 -
 doxyxml/class_interp1d.xml                    |  142 -
 doxyxml/class_isothermal.xml                  |  128 -
 doxyxml/class_isothermal_sphere.xml           |  762 --
 doxyxml/class_iterable.xml                    |  179 -
 doxyxml/class_jaco_quad.xml                   |   93 -
 doxyxml/class_k_dtree_1_1_cache.xml           |  132 -
 doxyxml/class_k_dtree_1_1kdtree.xml           |  620 --
 doxyxml/class_k_dtree_1_1point.xml            |  429 -
 doxyxml/class_kalnajs_disk.xml                |  673 --
 doxyxml/class_key_convert.xml                 |  248 -
 doxyxml/class_king_sphere.xml                 |  407 -
 doxyxml/class_lagu_quad.xml                   |   81 -
 doxyxml/class_lege_quad.xml                   |   90 -
 doxyxml/class_legendre.xml                    |  237 -
 doxyxml/class_linear1d.xml                    |  252 -
 doxyxml/class_logarithmic.xml                 |  254 -
 doxyxml/class_low_iso.xml                     |  400 -
 doxyxml/class_low_sing_isothermal_sphere.xml  |  805 --
 doxyxml/class_m_ndisk.xml                     |  149 -
 doxyxml/class_make_model.xml                  |  272 -
 doxyxml/class_mass_model.xml                  |  469 -
 doxyxml/class_master_header.xml               |   92 -
 doxyxml/class_mestel_disk.xml                 |  586 --
 doxyxml/class_mixture_basis.xml               |  249 -
 doxyxml/class_miyamoto.xml                    |  297 -
 doxyxml/class_miyamoto___needle.xml           |  484 -
 doxyxml/class_modified___hubble.xml           |  255 -
 doxyxml/class_monot_cubic_interpolator.xml    | 1263 ---
 doxyxml/class_needle.xml                      |  400 -
 doxyxml/class_no_force.xml                    |  325 -
 doxyxml/class_o_d_e_1_1_r_k4.xml              |  119 -
 doxyxml/class_one_d_biorth.xml                |  424 -
 doxyxml/class_one_d_model.xml                 |  473 -
 doxyxml/class_one_d_model_table.xml           |  547 --
 doxyxml/class_one_d_trig.xml                  |  729 --
 doxyxml/class_orb_trace.xml                   |  527 --
 doxyxml/class_orient.xml                      | 1279 ---
 doxyxml/class_ortho_function.xml              |  543 --
 doxyxml/class_ortho_poly.xml                  |  438 -
 doxyxml/class_out_ascii.xml                   |  359 -
 doxyxml/class_out_c_h_k_p_t.xml               |  264 -
 doxyxml/class_out_c_h_k_p_t_q.xml             |  264 -
 doxyxml/class_out_calbr.xml                   |  540 --
 doxyxml/class_out_coef.xml                    |  312 -
 doxyxml/class_out_diag.xml                    |  324 -
 doxyxml/class_out_frac.xml                    |  327 -
 doxyxml/class_out_log.xml                     |  927 --
 doxyxml/class_out_multi.xml                   |  226 -
 doxyxml/class_out_p_s.xml                     |  241 -
 doxyxml/class_out_p_s_n.xml                   |  287 -
 doxyxml/class_out_p_s_p.xml                   |  295 -
 doxyxml/class_out_p_s_q.xml                   |  312 -
 doxyxml/class_out_p_s_r.xml                   |  345 -
 doxyxml/class_out_relaxation.xml              |  239 -
 doxyxml/class_out_vel.xml                     |  530 --
 doxyxml/class_output.xml                      |  432 -
 doxyxml/class_output_container.xml            |  147 -
 doxyxml/class_p2_quantile.xml                 |  285 -
 doxyxml/class_p_particle.xml                  |  240 -
 doxyxml/class_p_r_1_1_gadget_h_d_f5.xml       |  445 -
 doxyxml/class_p_r_1_1_gadget_native.xml       |  467 -
 doxyxml/class_p_r_1_1_p_particle.xml          |  139 -
 doxyxml/class_p_r_1_1_p_s_p.xml               |  737 --
 doxyxml/class_p_r_1_1_p_s_pout.xml            |  232 -
 doxyxml/class_p_r_1_1_p_s_pspl.xml            |  280 -
 doxyxml/class_p_r_1_1_p_s_pstanza.xml         |  204 -
 doxyxml/class_p_r_1_1_particle_reader.xml     |  407 -
 doxyxml/class_p_r_1_1_tipsy.xml               |  552 --
 doxyxml/class_p_s_p.xml                       | 1150 ---
 doxyxml/class_p_s_pout.xml                    |  308 -
 doxyxml/class_p_s_pspl.xml                    |  369 -
 doxyxml/class_p_s_pstanza.xml                 |  253 -
 doxyxml/class_p_v_quad.xml                    |  473 -
 doxyxml/class_particle.xml                    |  710 --
 doxyxml/class_particle_buffer.xml             |  254 -
 doxyxml/class_particle_ferry.xml              |  386 -
 doxyxml/class_perfect.xml                     |  445 -
 doxyxml/class_periodic_b_c.xml                |  516 --
 doxyxml/class_phase.xml                       | 1029 ---
 doxyxml/class_plummer.xml                     |  273 -
 doxyxml/class_plummer_soft.xml                |   68 -
 doxyxml/class_plummer_sphere.xml              |  585 --
 doxyxml/class_point___quadrupole.xml          |   90 -
 doxyxml/class_polar_basis.xml                 | 2712 ------
 doxyxml/class_poly.xml                        |  469 -
 doxyxml/class_pot_accel.xml                   | 1588 ----
 doxyxml/class_pot_r_z.xml                     |  327 -
 doxyxml/class_pot_r_z_1_1_sk.xml              |  137 -
 doxyxml/class_pseudo_accel.xml                |  239 -
 doxyxml/class_py_model.xml                    |  119 -
 doxyxml/class_q_d_h_t.xml                     |  387 -
 doxyxml/class_q_p_dist_f.xml                  | 1866 ----
 doxyxml/class_quad_l_s.xml                    |  141 -
 doxyxml/class_quadrupole___bar.xml            |  115 -
 doxyxml/class_r_u_n.xml                       |  128 -
 doxyxml/class_regular_orbit.xml               |  318 -
 doxyxml/class_ring_iterator.xml               |  469 -
 doxyxml/class_running_time.xml                |  352 -
 doxyxml/class_s_l_grid_slab.xml               | 1149 ---
 doxyxml/class_s_l_grid_slab_1_1_coord_map.xml |  192 -
 .../class_s_l_grid_slab_1_1_linear_map.xml    |  127 -
 doxyxml/class_s_l_grid_slab_1_1_sech_map.xml  |  127 -
 doxyxml/class_s_l_grid_slab_1_1_tanh_map.xml  |  127 -
 doxyxml/class_s_l_grid_sph.xml                | 1383 ---
 doxyxml/class_s_particle.xml                  |  774 --
 doxyxml/class_s_ptype.xml                     |   81 -
 doxyxml/class_scatter_m_f_p.xml               |  528 --
 doxyxml/class_sech2.xml                       |  591 --
 doxyxml/class_sech2_halo.xml                  |  784 --
 doxyxml/class_sech2mu.xml                     |  708 --
 doxyxml/class_shells.xml                      |  866 --
 doxyxml/class_sim_ann.xml                     |  859 --
 doxyxml/class_sing_isothermal_sphere.xml      |  549 --
 doxyxml/class_slab_model.xml                  |  135 -
 doxyxml/class_slab_s_l.xml                    |  946 --
 doxyxml/class_soft_kernel.xml                 |   99 -
 doxyxml/class_sph_s_l.xml                     | 1437 ---
 doxyxml/class_sphere.xml                      | 1376 ---
 doxyxml/class_sphere_s_l.xml                  |  685 --
 doxyxml/class_spherical_basis.xml             | 2336 -----
 doxyxml/class_spherical_model_multi.xml       |  793 --
 doxyxml/class_spherical_model_table.xml       | 1148 ---
 doxyxml/class_spherical_orbit.xml             | 1334 ---
 doxyxml/class_spherical_s_l.xml               | 1145 ---
 doxyxml/class_spline1d.xml                    |  317 -
 doxyxml/class_spline2d.xml                    |  216 -
 doxyxml/class_spline_soft.xml                 |  239 -
 doxyxml/class_stats_m_p_i.xml                 |  269 -
 doxyxml/class_string_tok.xml                  |   96 -
 doxyxml/class_swap.xml                        |  178 -
 doxyxml/class_table_cyl.xml                   |   76 -
 doxyxml/class_table_grid.xml                  |  245 -
 doxyxml/class_table_slab.xml                  |   76 -
 doxyxml/class_table_sph.xml                   |   61 -
 doxyxml/class_tapered_mestel_disk.xml         |  556 --
 doxyxml/class_three_d_grid.xml                |  309 -
 doxyxml/class_time.xml                        |  104 -
 doxyxml/class_timer.xml                       |  264 -
 doxyxml/class_tipsy_reader_1_1_tipsy_file.xml |  197 -
 .../class_tipsy_reader_1_1_tipsy_native.xml   |  282 -
 doxyxml/class_toomre_disk.xml                 |  575 --
 doxyxml/class_transform_f_f_t.xml             |  295 -
 doxyxml/class_truncated.xml                   |  182 -
 doxyxml/class_two_center.xml                  |  874 --
 doxyxml/class_two_d_coefs.xml                 |  273 -
 doxyxml/class_ultra.xml                       |  260 -
 doxyxml/class_user_bar.xml                    |  820 --
 doxyxml/class_user_disk.xml                   |  740 --
 doxyxml/class_user_halo.xml                   |  581 --
 doxyxml/class_user_log_pot.xml                |  391 -
 doxyxml/class_user_m_ndisk.xml                |  493 -
 doxyxml/class_user_m_w.xml                    |  924 --
 doxyxml/class_user_test.xml                   |  243 -
 doxyxml/class_user_test_cuda.xml              |  320 -
 doxyxml/class_vtk_grid.xml                    |  288 -
 doxyxml/class_vtk_p_c_a.xml                   |  385 -
 doxyxml/class_yaml_config_error.xml           |  116 -
 doxyxml/class_z_brent.xml                     |  145 -
 doxyxml/class_zang_disk.xml                   |  692 --
 doxyxml/classbw__struct.xml                   |  189 -
 doxyxml/classcircular__buffer.xml             |  722 --
 doxyxml/classcoulomb_select.xml               |  285 -
 doxyxml/classcxxopts_1_1_key_value.xml        |  128 -
 doxyxml/classcxxopts_1_1_option_adder.xml     |  119 -
 doxyxml/classcxxopts_1_1_option_details.xml   |  290 -
 doxyxml/classcxxopts_1_1_option_exception.xml |  174 -
 ...lasscxxopts_1_1_option_parse_exception.xml |  129 -
 doxyxml/classcxxopts_1_1_option_parser.xml    |  409 -
 ...classcxxopts_1_1_option_spec_exception.xml |   87 -
 doxyxml/classcxxopts_1_1_option_value.xml     |  243 -
 doxyxml/classcxxopts_1_1_options.xml          |  805 --
 doxyxml/classcxxopts_1_1_parse_result.xml     |  352 -
 ...scxxopts_1_1_parse_result_1_1_iterator.xml |  308 -
 doxyxml/classcxxopts_1_1_value.xml            |  296 -
 ...sscxxopts_1_1argument__incorrect__type.xml |   86 -
 ...opts_1_1invalid__option__format__error.xml |   86 -
 ...xxopts_1_1missing__argument__exception.xml |   86 -
 .../classcxxopts_1_1option__exists__error.xml |   86 -
 ...s_1_1option__has__no__value__exception.xml |   73 -
 ...opts_1_1option__not__exists__exception.xml |   86 -
 ...1option__not__has__argument__exception.xml |   90 -
 ...pts_1_1option__not__present__exception.xml |   86 -
 ...cxxopts_1_1option__required__exception.xml |   86 -
 ...1option__requires__argument__exception.xml |   86 -
 ...sscxxopts_1_1option__syntax__exception.xml |   86 -
 ...sscxxopts_1_1values_1_1abstract__value.xml |  518 --
 ...sscxxopts_1_1values_1_1standard__value.xml |  109 -
 ...alues_1_1standard__value_3_01bool_01_4.xml |  176 -
 doxyxml/classdiskbulge.xml                    |  229 -
 doxyxml/classexternal_shock.xml               |  368 -
 doxyxml/classfoarray.xml                      |  116 -
 doxyxml/classgenerate_relaxation.xml          |  259 -
 doxyxml/classkdtree.xml                       |  534 --
 doxyxml/classlargest_values.xml               |  133 -
 doxyxml/classnv_tracer.xml                    |   50 -
 doxyxml/classpermutation.xml                  |  163 -
 doxyxml/classpoint.xml                        |  427 -
 .../classprogress_1_1progress__display.xml    |  232 -
 doxyxml/classpsp__io_1_1_input.xml            |  285 -
 doxyxml/classpsp__io_1_1_o_u_t_input.xml      |  196 -
 doxyxml/classpsp__io_1_1_s_p_l_input.xml      |  241 -
 doxyxml/classtidal_field.xml                  |  296 -
 doxyxml/combine.xslt                          |   15 -
 doxyxml/compound.xsd                          | 1635 ----
 doxyxml/cpoly_8_h.xml                         |  146 -
 doxyxml/cubic_8_h.xml                         |   96 -
 doxyxml/cxxopts_8_h.xml                       | 2947 ------
 .../dir_0d884aca60d2865b420c5a3dea957f44.xml  |   18 -
 .../dir_68267d1309a1af8e8297ef4c3efbcdba.xml  |   76 -
 .../dir_8b0164eb0fb74115683f9812cb2f78f0.xml  |   19 -
 .../dir_bc1ea1dd34437456447120be9e7e4b32.xml  |   17 -
 .../dir_cbdb8362360e11eafe2fa3bc74cf0ffd.xml  |   14 -
 .../dir_d44c64559bbebec7f509842c48db8b23.xml  |  119 -
 .../dir_f0240bbd5db61298e31b1fa3201f487a.xml  |   24 -
 doxyxml/doxyfile.xsd                          |   45 -
 doxyxml/euler_8_h.xml                         |  283 -
 doxyxml/expand_8_h.xml                        | 1774 ----
 doxyxml/exponential_8_h.xml                   |  246 -
 doxyxml/exputils_8_h.xml                      |   90 -
 doxyxml/external_shock_8_h.xml                |  186 -
 doxyxml/foarray_8_h.xml                       |   84 -
 doxyxml/fpetrap_8h.xml                        |  190 -
 doxyxml/gadget_8_h.xml                        |   68 -
 doxyxml/gauss_q_8_h.xml                       |  530 --
 doxyxml/generate_relaxation_8_h.xml           |   35 -
 doxyxml/gknots_8h.xml                         |   79 -
 doxyxml/global_8_h.xml                        | 1874 ----
 doxyxml/global__key__set_8_h.xml              |   86 -
 doxyxml/header_8_h.xml                        |  367 -
 doxyxml/hernquist__model_8_h.xml              |  240 -
 doxyxml/hunter_8_h.xml                        |  271 -
 doxyxml/include_2_particle_8_h.xml            |  327 -
 doxyxml/include_2coef_8_h.xml                 |  113 -
 doxyxml/include_2exp__thread_8h.xml           |  113 -
 doxyxml/index.xml                             | 7920 -----------------
 doxyxml/index.xsd                             |   72 -
 doxyxml/interp_8_h.xml                        | 1002 ---
 doxyxml/isothermal_8_h.xml                    |  446 -
 doxyxml/kalnajs_8_h.xml                       |  133 -
 doxyxml/king_8_h.xml                          |  178 -
 doxyxml/largest_8_h.xml                       |   76 -
 doxyxml/libvars_8_h.xml                       |  357 -
 doxyxml/localmpi_8_h.xml                      |  644 --
 doxyxml/massmodel1d_8_h.xml                   |  605 --
 doxyxml/massmodel_8_h.xml                     |  981 --
 doxyxml/mestel_8_h.xml                        |  248 -
 doxyxml/model2d_8_h.xml                       |   93 -
 doxyxml/model3d_8_h.xml                       |  104 -
 doxyxml/models_8_h.xml                        |  304 -
 doxyxml/namespace_alt_math.xml                |  127 -
 doxyxml/namespace_eigen.xml                   |   11 -
 doxyxml/namespace_k_dtree.xml                 |   50 -
 doxyxml/namespace_o_d_e.xml                   |   12 -
 doxyxml/namespace_p_r.xml                     |   36 -
 doxyxml/namespace_tipsy_reader.xml            |   50 -
 doxyxml/namespacecxxopts.xml                  |  435 -
 doxyxml/namespacecxxopts_1_1_0d19.xml         |   11 -
 doxyxml/namespacecxxopts_1_1values.xml        |  289 -
 .../namespacecxxopts_1_1values_1_1detail.xml  |   51 -
 ...spacecxxopts_1_1values_1_1parser__tool.xml |  121 -
 ...pts_1_1values_1_1parser__tool_1_1_0d19.xml |   11 -
 doxyxml/namespaceprogress.xml                 |   12 -
 doxyxml/namespacepsp__io.xml                  |   21 -
 doxyxml/namespacestd.xml                      |   11 -
 doxyxml/needle_8_h.xml                        |   63 -
 doxyxml/norminv_8_h.xml                       |  384 -
 doxyxml/numerical_8_h.xml                     |  950 --
 doxyxml/orbit_8_h.xml                         |  599 --
 doxyxml/parse_version_string_8_h.xml          |   60 -
 doxyxml/permutation_8_h.xml                   |   87 -
 doxyxml/phase_8_h.xml                         |  520 --
 doxyxml/plummer_8_h.xml                       |  242 -
 doxyxml/poly_8_h.xml                          |  156 -
 doxyxml/psp__io_8py.xml                       |  581 --
 doxyxml/rotcurv_8_h.xml                       |  124 -
 doxyxml/sltable_m_p2_8_h.xml                  |  186 -
 doxyxml/sphere_s_l_8_h.xml                    |  338 -
 doxyxml/src_2coef_8_h.xml                     |  230 -
 doxyxml/src_2tipsydefs_8h.xml                 |  169 -
 doxyxml/staeckel_8_h.xml                      |   56 -
 doxyxml/struct_a_n_g_l_e___g_r_i_d.xml        |  121 -
 .../struct_color_gradient_1_1_color_point.xml |  114 -
 doxyxml/struct_cyl_coef_header.xml            |   65 -
 doxyxml/struct_cyl_coefs.xml                  |  132 -
 .../struct_emp_cyl_s_l_1_1_coef_matrix.xml    |   67 -
 .../struct_emp_cyl_s_l_1_1_coef_vector.xml    |   74 -
 .../struct_emp_cyl_s_l_1_1_mstep_array.xml    |   66 -
 doxyxml/struct_enum_traits.xml                |   19 -
 doxyxml/struct_g_a_u_s_s.xml                  |   61 -
 doxyxml/struct_iterator.xml                   |  109 -
 doxyxml/struct_k_dtree_1_1kdtree_1_1node.xml  |  155 -
 .../struct_k_dtree_1_1kdtree_1_1node__cmp.xml |   78 -
 doxyxml/struct_orb_values.xml                 |  181 -
 .../struct_polar_basis_1_1_coef_matrix.xml    |   66 -
 .../struct_polar_basis_1_1_coef_vector.xml    |   73 -
 doxyxml/struct_pot_accel_1_1_n_data.xml       |   62 -
 ...ruct_slab_s_l_1_1_slab_s_l_coef_header.xml |  136 -
 doxyxml/struct_sph_coef_header.xml            |   92 -
 doxyxml/struct_sph_coefs.xml                  |  116 -
 doxyxml/struct_tipsy_reader_1_1_header.xml    |  113 -
 .../struct_tipsy_reader_1_1dark__particle.xml |  112 -
 .../struct_tipsy_reader_1_1gas__particle.xml  |  157 -
 .../struct_tipsy_reader_1_1star__particle.xml |  142 -
 doxyxml/struct_two_d_coefs_1_1_coefs.xml      |  142 -
 ...ctcircular__buffer_1_1_buffer_iterator.xml |  528 --
 .../structcxxopts_1_1_help_group_details.xml  |   64 -
 .../structcxxopts_1_1_help_option_details.xml |  167 -
 doxyxml/structcxxopts_1_1_option.xml          |  111 -
 ...s_1_1values_1_1detail_1_1_signed_check.xml |   23 -
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diff --git a/conf.py b/conf.py
index fe22e7f..82c2ffc 100644
--- a/conf.py
+++ b/conf.py
@@ -3,6 +3,29 @@
 # For the full list of built-in configuration values, see the documentation:
 # https://www.sphinx-doc.org/en/master/usage/configuration.html
 
+# -- Generate doxygen xml prior to build --------------------------------------
+import os
+import subprocess
+
+# Define the repository URL and target directory
+repo_url  = "https://github.com/EXP-code/EXP.git"
+clone_dir = "exp_repo"
+branch    = "SLboundaries"
+doxyfile  = "exp.cfg.breathe"
+doxy_dir  = "doc"
+
+# Clone the repository if it doesn't exist
+if not os.path.exists(clone_dir):
+    subprocess.run(["git", "clone", repo_url, clone_dir], check=True)
+
+# Move to source and get the desired branch
+os.chdir(clone_dir)
+subprocess.run(["git", "checkout", branch])
+os.chdir(doxy_dir)
+
+# Ensure Doxygen is installed and its executable is in your PATH
+subprocess.run(["doxygen", doxyfile], check=True)
+
 # -- Project information -----------------------------------------------------
 # https://www.sphinx-doc.org/en/master/usage/configuration.html#project-information
 
@@ -36,7 +59,7 @@
 templates_path = ['_templates']
 exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store', 'README.rst']
 
-breathe_projects = {"EXP": "doxyxml/"}
+breathe_projects = {"EXP": "exp_repo/doc/xml/"}
 breathe_default_project = "EXP"
 
 # -- Options for HTML output -------------------------------------------------
@@ -53,7 +76,5 @@
 nbsphinx_execute = 'never'
 
 # -- Grab files from pyEXP-examples -----------------------------------------
-import os
-
 os.system("cd intro/Tutorials; rm *ipynb*; wget -L https://raw.githubusercontent.com/EXP-code/pyEXP-examples/refs/heads/main/Tutorials/Introduction/Part1-Coefficients.ipynb; wget -L https://raw.githubusercontent.com/EXP-code/pyEXP-examples/refs/heads/main/Tutorials/Introduction/Part2-Analysis.ipynb")
 
diff --git a/doxyxml/Doxyfile.xml b/doxyxml/Doxyfile.xml
deleted file mode 100644
index bef3475..0000000
--- a/doxyxml/Doxyfile.xml
+++ /dev/null
@@ -1,361 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxyfile xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="doxyfile.xsd" version="1.9.8" xml:lang="en-US">
-  <option  id='DOXYFILE_ENCODING' default='yes' type='string'><value><![CDATA[UTF-8]]></value></option>
-  <option  id='PROJECT_NAME' default='no' type='string'><value><![CDATA[EXP]]></value></option>
-  <option  id='PROJECT_NUMBER' default='no' type='string'><value><![CDATA[7.8.0]]></value></option>
-  <option  id='PROJECT_BRIEF' default='no' type='string'><value><![CDATA[Basis-function-EXP-ansionCode]]></value></option>
-  <option  id='PROJECT_LOGO' default='no' type='string'><value><![CDATA[exp_logo.png]]></value></option>
-  <option  id='OUTPUT_DIRECTORY' default='no' type='string'><value><![CDATA[.]]></value></option>
-  <option  id='CREATE_SUBDIRS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='CREATE_SUBDIRS_LEVEL' default='yes' type='int'><value>8</value></option>
-  <option  id='ALLOW_UNICODE_NAMES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='OUTPUT_LANGUAGE' default='yes' type='string'><value>English</value></option>
-  <option  id='BRIEF_MEMBER_DESC' default='yes' type='bool'><value>YES</value></option>
-  <option  id='REPEAT_BRIEF' default='yes' type='bool'><value>YES</value></option>
-  <option  id='ABBREVIATE_BRIEF' default='yes' type='stringlist'>
-    <value><![CDATA["The $name class"]]></value>
-    <value><![CDATA["The $name widget"]]></value>
-    <value><![CDATA["The $name file"]]></value>
-    <value><![CDATA[is]]></value>
-    <value><![CDATA[provides]]></value>
-    <value><![CDATA[specifies]]></value>
-    <value><![CDATA[contains]]></value>
-    <value><![CDATA[represents]]></value>
-    <value><![CDATA[a]]></value>
-    <value><![CDATA[an]]></value>
-    <value><![CDATA[the]]></value>
-  </option>
-  <option  id='ALWAYS_DETAILED_SEC' default='yes' type='bool'><value>NO</value></option>
-  <option  id='INLINE_INHERITED_MEMB' default='yes' type='bool'><value>NO</value></option>
-  <option  id='FULL_PATH_NAMES' default='yes' type='bool'><value>YES</value></option>
-  <option  id='STRIP_FROM_PATH' default='yes' type='stringlist'>
-  </option>
-  <option  id='STRIP_FROM_INC_PATH' default='yes' type='stringlist'>
-  </option>
-  <option  id='SHORT_NAMES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='JAVADOC_AUTOBRIEF' default='yes' type='bool'><value>NO</value></option>
-  <option  id='JAVADOC_BANNER' default='yes' type='bool'><value>NO</value></option>
-  <option  id='QT_AUTOBRIEF' default='yes' type='bool'><value>NO</value></option>
-  <option  id='MULTILINE_CPP_IS_BRIEF' default='yes' type='bool'><value>NO</value></option>
-  <option  id='PYTHON_DOCSTRING' default='yes' type='bool'><value>YES</value></option>
-  <option  id='INHERIT_DOCS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SEPARATE_MEMBER_PAGES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='TAB_SIZE' default='no' type='int'><value>8</value></option>
-  <option  id='ALIASES' default='yes' type='stringlist'>
-  </option>
-  <option  id='OPTIMIZE_OUTPUT_FOR_C' default='yes' type='bool'><value>NO</value></option>
-  <option  id='OPTIMIZE_OUTPUT_JAVA' default='yes' type='bool'><value>NO</value></option>
-  <option  id='OPTIMIZE_FOR_FORTRAN' default='yes' type='bool'><value>NO</value></option>
-  <option  id='OPTIMIZE_OUTPUT_VHDL' default='yes' type='bool'><value>NO</value></option>
-  <option  id='OPTIMIZE_OUTPUT_SLICE' default='yes' type='bool'><value>NO</value></option>
-  <option  id='EXTENSION_MAPPING' default='yes' type='stringlist'>
-  </option>
-  <option  id='MARKDOWN_SUPPORT' default='yes' type='bool'><value>YES</value></option>
-  <option  id='TOC_INCLUDE_HEADINGS' default='yes' type='int'><value>5</value></option>
-  <option  id='MARKDOWN_ID_STYLE' default='yes' type='string'><value>DOXYGEN</value></option>
-  <option  id='AUTOLINK_SUPPORT' default='yes' type='bool'><value>YES</value></option>
-  <option  id='BUILTIN_STL_SUPPORT' default='yes' type='bool'><value>NO</value></option>
-  <option  id='CPP_CLI_SUPPORT' default='yes' type='bool'><value>NO</value></option>
-  <option  id='SIP_SUPPORT' default='yes' type='bool'><value>NO</value></option>
-  <option  id='IDL_PROPERTY_SUPPORT' default='no' type='bool'><value>NO</value></option>
-  <option  id='DISTRIBUTE_GROUP_DOC' default='yes' type='bool'><value>NO</value></option>
-  <option  id='GROUP_NESTED_COMPOUNDS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='SUBGROUPING' default='yes' type='bool'><value>YES</value></option>
-  <option  id='INLINE_GROUPED_CLASSES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='INLINE_SIMPLE_STRUCTS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='TYPEDEF_HIDES_STRUCT' default='yes' type='bool'><value>NO</value></option>
-  <option  id='LOOKUP_CACHE_SIZE' default='yes' type='int'><value>0</value></option>
-  <option  id='NUM_PROC_THREADS' default='yes' type='int'><value>1</value></option>
-  <option  id='TIMESTAMP' default='no' type='string'><value>YES</value></option>
-  <option  id='EXTRACT_ALL' default='no' type='bool'><value>YES</value></option>
-  <option  id='EXTRACT_PRIVATE' default='no' type='bool'><value>YES</value></option>
-  <option  id='EXTRACT_PRIV_VIRTUAL' default='yes' type='bool'><value>NO</value></option>
-  <option  id='EXTRACT_PACKAGE' default='yes' type='bool'><value>NO</value></option>
-  <option  id='EXTRACT_STATIC' default='no' type='bool'><value>YES</value></option>
-  <option  id='EXTRACT_LOCAL_CLASSES' default='yes' type='bool'><value>YES</value></option>
-  <option  id='EXTRACT_LOCAL_METHODS' default='no' type='bool'><value>YES</value></option>
-  <option  id='EXTRACT_ANON_NSPACES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='RESOLVE_UNNAMED_PARAMS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='HIDE_UNDOC_MEMBERS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='HIDE_UNDOC_CLASSES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='HIDE_FRIEND_COMPOUNDS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='HIDE_IN_BODY_DOCS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='INTERNAL_DOCS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='CASE_SENSE_NAMES' default='no' type='string'><value>NO</value></option>
-  <option  id='HIDE_SCOPE_NAMES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='HIDE_COMPOUND_REFERENCE' default='yes' type='bool'><value>NO</value></option>
-  <option  id='SHOW_HEADERFILE' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SHOW_INCLUDE_FILES' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SHOW_GROUPED_MEMB_INC' default='yes' type='bool'><value>NO</value></option>
-  <option  id='FORCE_LOCAL_INCLUDES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='INLINE_INFO' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SORT_MEMBER_DOCS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SORT_BRIEF_DOCS' default='no' type='bool'><value>YES</value></option>
-  <option  id='SORT_MEMBERS_CTORS_1ST' default='yes' type='bool'><value>NO</value></option>
-  <option  id='SORT_GROUP_NAMES' default='no' type='bool'><value>YES</value></option>
-  <option  id='SORT_BY_SCOPE_NAME' default='yes' type='bool'><value>NO</value></option>
-  <option  id='STRICT_PROTO_MATCHING' default='yes' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_TODOLIST' default='no' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_TESTLIST' default='no' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_BUGLIST' default='no' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_DEPRECATEDLIST' default='yes' type='bool'><value>YES</value></option>
-  <option  id='ENABLED_SECTIONS' default='yes' type='stringlist'>
-  </option>
-  <option  id='MAX_INITIALIZER_LINES' default='yes' type='int'><value>30</value></option>
-  <option  id='SHOW_USED_FILES' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SHOW_FILES' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SHOW_NAMESPACES' default='yes' type='bool'><value>YES</value></option>
-  <option  id='FILE_VERSION_FILTER' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='LAYOUT_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='CITE_BIB_FILES' default='yes' type='stringlist'>
-  </option>
-  <option  id='QUIET' default='yes' type='bool'><value>NO</value></option>
-  <option  id='WARNINGS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='WARN_IF_UNDOCUMENTED' default='no' type='bool'><value>NO</value></option>
-  <option  id='WARN_IF_DOC_ERROR' default='no' type='bool'><value>NO</value></option>
-  <option  id='WARN_IF_INCOMPLETE_DOC' default='yes' type='bool'><value>YES</value></option>
-  <option  id='WARN_NO_PARAMDOC' default='yes' type='bool'><value>NO</value></option>
-  <option  id='WARN_IF_UNDOC_ENUM_VAL' default='yes' type='bool'><value>NO</value></option>
-  <option  id='WARN_AS_ERROR' default='yes' type='string'><value>NO</value></option>
-  <option  id='WARN_FORMAT' default='yes' type='string'><value><![CDATA["$file:$line: $text"]]></value></option>
-  <option  id='WARN_LINE_FORMAT' default='yes' type='string'><value><![CDATA["at line $line of file $file"]]></value></option>
-  <option  id='WARN_LOGFILE' default='no' type='string'><value><![CDATA[debug.txt]]></value></option>
-  <option  id='INPUT' default='no' type='stringlist'>
-    <value><![CDATA[../include]]></value>
-    <value><![CDATA[../src]]></value>
-    <value><![CDATA[../src/user]]></value>
-    <value><![CDATA[../utils/ICs]]></value>
-    <value><![CDATA[../utils/Analysis]]></value>
-    <value><![CDATA[../utils/PhaseSpace]]></value>
-  </option>
-  <option  id='INPUT_ENCODING' default='yes' type='string'><value><![CDATA[UTF-8]]></value></option>
-  <option  id='INPUT_FILE_ENCODING' default='yes' type='stringlist'>
-  </option>
-  <option  id='FILE_PATTERNS' default='no' type='stringlist'>
-    <value><![CDATA[*.py]]></value>
-    <value><![CDATA[*.h]]></value>
-    <value><![CDATA[*.H]]></value>
-  </option>
-  <option  id='RECURSIVE' default='no' type='bool'><value>YES</value></option>
-  <option  id='EXCLUDE' default='yes' type='stringlist'>
-  </option>
-  <option  id='EXCLUDE_SYMLINKS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='EXCLUDE_PATTERNS' default='no' type='stringlist'>
-    <value><![CDATA[_*]]></value>
-  </option>
-  <option  id='EXCLUDE_SYMBOLS' default='no' type='stringlist'>
-    <value><![CDATA[_*]]></value>
-  </option>
-  <option  id='EXAMPLE_PATH' default='no' type='stringlist'>
-    <value><![CDATA[./README]]></value>
-    <value><![CDATA[./LICENSE]]></value>
-  </option>
-  <option  id='EXAMPLE_PATTERNS' default='yes' type='stringlist'>
-    <value><![CDATA[*]]></value>
-  </option>
-  <option  id='EXAMPLE_RECURSIVE' default='yes' type='bool'><value>NO</value></option>
-  <option  id='IMAGE_PATH' default='no' type='stringlist'>
-    <value><![CDATA[.]]></value>
-  </option>
-  <option  id='INPUT_FILTER' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='FILTER_PATTERNS' default='yes' type='stringlist'>
-  </option>
-  <option  id='FILTER_SOURCE_FILES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='FILTER_SOURCE_PATTERNS' default='yes' type='stringlist'>
-  </option>
-  <option  id='USE_MDFILE_AS_MAINPAGE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='FORTRAN_COMMENT_AFTER' default='yes' type='int'><value>72</value></option>
-  <option  id='SOURCE_BROWSER' default='no' type='bool'><value>YES</value></option>
-  <option  id='INLINE_SOURCES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='STRIP_CODE_COMMENTS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='REFERENCED_BY_RELATION' default='yes' type='bool'><value>NO</value></option>
-  <option  id='REFERENCES_RELATION' default='yes' type='bool'><value>NO</value></option>
-  <option  id='REFERENCES_LINK_SOURCE' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SOURCE_TOOLTIPS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='USE_HTAGS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='VERBATIM_HEADERS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='CLANG_ASSISTED_PARSING' default='yes' type='bool'><value>NO</value></option>
-  <option  id='CLANG_ADD_INC_PATHS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='CLANG_OPTIONS' default='yes' type='stringlist'>
-  </option>
-  <option  id='CLANG_DATABASE_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='ALPHABETICAL_INDEX' default='yes' type='bool'><value>YES</value></option>
-  <option  id='IGNORE_PREFIX' default='yes' type='stringlist'>
-  </option>
-  <option  id='GENERATE_HTML' default='yes' type='bool'><value>YES</value></option>
-  <option  id='HTML_OUTPUT' default='yes' type='string'><value><![CDATA[html]]></value></option>
-  <option  id='HTML_FILE_EXTENSION' default='yes' type='string'><value><![CDATA[.html]]></value></option>
-  <option  id='HTML_HEADER' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='HTML_FOOTER' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='HTML_STYLESHEET' default='no' type='string'><value><![CDATA[./Tools/Documentation/doxygen.css]]></value></option>
-  <option  id='HTML_EXTRA_STYLESHEET' default='no' type='stringlist'>
-    <value><![CDATA[newcustom.css]]></value>
-    <value><![CDATA[custom.css]]></value>
-  </option>
-  <option  id='HTML_EXTRA_FILES' default='yes' type='stringlist'>
-  </option>
-  <option  id='HTML_COLORSTYLE' default='yes' type='string'><value>AUTO_LIGHT</value></option>
-  <option  id='HTML_COLORSTYLE_HUE' default='no' type='int'><value>209</value></option>
-  <option  id='HTML_COLORSTYLE_SAT' default='no' type='int'><value>255</value></option>
-  <option  id='HTML_COLORSTYLE_GAMMA' default='no' type='int'><value>113</value></option>
-  <option  id='HTML_DYNAMIC_MENUS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='HTML_DYNAMIC_SECTIONS' default='no' type='bool'><value>YES</value></option>
-  <option  id='HTML_CODE_FOLDING' default='yes' type='bool'><value>YES</value></option>
-  <option  id='HTML_INDEX_NUM_ENTRIES' default='yes' type='int'><value>100</value></option>
-  <option  id='GENERATE_DOCSET' default='yes' type='bool'><value>NO</value></option>
-  <option  id='DOCSET_FEEDNAME' default='yes' type='string'><value><![CDATA["Doxygen generated docs"]]></value></option>
-  <option  id='DOCSET_FEEDURL' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='DOCSET_BUNDLE_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
-  <option  id='DOCSET_PUBLISHER_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Publisher]]></value></option>
-  <option  id='DOCSET_PUBLISHER_NAME' default='yes' type='string'><value><![CDATA[Publisher]]></value></option>
-  <option  id='GENERATE_HTMLHELP' default='yes' type='bool'><value>NO</value></option>
-  <option  id='CHM_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='HHC_LOCATION' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='GENERATE_CHI' default='yes' type='bool'><value>NO</value></option>
-  <option  id='CHM_INDEX_ENCODING' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='BINARY_TOC' default='yes' type='bool'><value>NO</value></option>
-  <option  id='TOC_EXPAND' default='yes' type='bool'><value>NO</value></option>
-  <option  id='SITEMAP_URL' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='GENERATE_QHP' default='yes' type='bool'><value>NO</value></option>
-  <option  id='QCH_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='QHP_NAMESPACE' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
-  <option  id='QHP_VIRTUAL_FOLDER' default='yes' type='string'><value><![CDATA[doc]]></value></option>
-  <option  id='QHP_CUST_FILTER_NAME' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='QHP_CUST_FILTER_ATTRS' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='QHP_SECT_FILTER_ATTRS' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='QHG_LOCATION' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='GENERATE_ECLIPSEHELP' default='yes' type='bool'><value>NO</value></option>
-  <option  id='ECLIPSE_DOC_ID' default='yes' type='string'><value><![CDATA[org.doxygen.Project]]></value></option>
-  <option  id='DISABLE_INDEX' default='yes' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_TREEVIEW' default='no' type='bool'><value>YES</value></option>
-  <option  id='FULL_SIDEBAR' default='yes' type='bool'><value>NO</value></option>
-  <option  id='ENUM_VALUES_PER_LINE' default='yes' type='int'><value>4</value></option>
-  <option  id='TREEVIEW_WIDTH' default='yes' type='int'><value>250</value></option>
-  <option  id='EXT_LINKS_IN_WINDOW' default='yes' type='bool'><value>NO</value></option>
-  <option  id='OBFUSCATE_EMAILS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='HTML_FORMULA_FORMAT' default='yes' type='string'><value>png</value></option>
-  <option  id='FORMULA_FONTSIZE' default='yes' type='int'><value>10</value></option>
-  <option  id='FORMULA_MACROFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='USE_MATHJAX' default='yes' type='bool'><value>NO</value></option>
-  <option  id='MATHJAX_VERSION' default='yes' type='string'><value>MathJax_2</value></option>
-  <option  id='MATHJAX_FORMAT' default='yes' type='string'><value>HTML-CSS</value></option>
-  <option  id='MATHJAX_RELPATH' default='no' type='string'><value><![CDATA[http://cdn.mathjax.org/mathjax/latest]]></value></option>
-  <option  id='MATHJAX_EXTENSIONS' default='yes' type='stringlist'>
-  </option>
-  <option  id='MATHJAX_CODEFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='SEARCHENGINE' default='yes' type='bool'><value>YES</value></option>
-  <option  id='SERVER_BASED_SEARCH' default='yes' type='bool'><value>NO</value></option>
-  <option  id='EXTERNAL_SEARCH' default='yes' type='bool'><value>NO</value></option>
-  <option  id='SEARCHENGINE_URL' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='SEARCHDATA_FILE' default='yes' type='string'><value><![CDATA[searchdata.xml]]></value></option>
-  <option  id='EXTERNAL_SEARCH_ID' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='EXTRA_SEARCH_MAPPINGS' default='yes' type='stringlist'>
-  </option>
-  <option  id='GENERATE_LATEX' default='no' type='bool'><value>NO</value></option>
-  <option  id='LATEX_OUTPUT' default='yes' type='string'><value><![CDATA[latex]]></value></option>
-  <option  id='LATEX_CMD_NAME' default='no' type='string'><value><![CDATA[latex]]></value></option>
-  <option  id='MAKEINDEX_CMD_NAME' default='yes' type='string'><value><![CDATA[makeindex]]></value></option>
-  <option  id='LATEX_MAKEINDEX_CMD' default='yes' type='string'><value><![CDATA[makeindex]]></value></option>
-  <option  id='COMPACT_LATEX' default='yes' type='bool'><value>NO</value></option>
-  <option  id='PAPER_TYPE' default='no' type='string'><value>letter</value></option>
-  <option  id='EXTRA_PACKAGES' default='yes' type='stringlist'>
-  </option>
-  <option  id='LATEX_HEADER' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='LATEX_FOOTER' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='LATEX_EXTRA_STYLESHEET' default='yes' type='stringlist'>
-  </option>
-  <option  id='LATEX_EXTRA_FILES' default='yes' type='stringlist'>
-  </option>
-  <option  id='PDF_HYPERLINKS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='USE_PDFLATEX' default='yes' type='bool'><value>YES</value></option>
-  <option  id='LATEX_BATCHMODE' default='yes' type='string'><value>NO</value></option>
-  <option  id='LATEX_HIDE_INDICES' default='yes' type='bool'><value>NO</value></option>
-  <option  id='LATEX_BIB_STYLE' default='yes' type='string'><value><![CDATA[plain]]></value></option>
-  <option  id='LATEX_EMOJI_DIRECTORY' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='GENERATE_RTF' default='yes' type='bool'><value>NO</value></option>
-  <option  id='RTF_OUTPUT' default='yes' type='string'><value><![CDATA[rtf]]></value></option>
-  <option  id='COMPACT_RTF' default='yes' type='bool'><value>NO</value></option>
-  <option  id='RTF_HYPERLINKS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='RTF_STYLESHEET_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='RTF_EXTENSIONS_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='GENERATE_MAN' default='yes' type='bool'><value>NO</value></option>
-  <option  id='MAN_OUTPUT' default='yes' type='string'><value><![CDATA[man]]></value></option>
-  <option  id='MAN_EXTENSION' default='yes' type='string'><value><![CDATA[.3]]></value></option>
-  <option  id='MAN_SUBDIR' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='MAN_LINKS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_XML' default='no' type='bool'><value>YES</value></option>
-  <option  id='XML_OUTPUT' default='yes' type='string'><value><![CDATA[xml]]></value></option>
-  <option  id='XML_PROGRAMLISTING' default='yes' type='bool'><value>YES</value></option>
-  <option  id='XML_NS_MEMB_FILE_SCOPE' default='yes' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_DOCBOOK' default='yes' type='bool'><value>NO</value></option>
-  <option  id='DOCBOOK_OUTPUT' default='yes' type='string'><value><![CDATA[docbook]]></value></option>
-  <option  id='GENERATE_AUTOGEN_DEF' default='yes' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_SQLITE3' default='yes' type='bool'><value>NO</value></option>
-  <option  id='SQLITE3_OUTPUT' default='yes' type='string'><value><![CDATA[sqlite3]]></value></option>
-  <option  id='SQLITE3_RECREATE_DB' default='yes' type='bool'><value>YES</value></option>
-  <option  id='GENERATE_PERLMOD' default='yes' type='bool'><value>NO</value></option>
-  <option  id='PERLMOD_LATEX' default='yes' type='bool'><value>NO</value></option>
-  <option  id='PERLMOD_PRETTY' default='yes' type='bool'><value>YES</value></option>
-  <option  id='PERLMOD_MAKEVAR_PREFIX' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='ENABLE_PREPROCESSING' default='yes' type='bool'><value>YES</value></option>
-  <option  id='MACRO_EXPANSION' default='yes' type='bool'><value>NO</value></option>
-  <option  id='EXPAND_ONLY_PREDEF' default='yes' type='bool'><value>NO</value></option>
-  <option  id='SEARCH_INCLUDES' default='yes' type='bool'><value>YES</value></option>
-  <option  id='INCLUDE_PATH' default='yes' type='stringlist'>
-  </option>
-  <option  id='INCLUDE_FILE_PATTERNS' default='yes' type='stringlist'>
-  </option>
-  <option  id='PREDEFINED' default='yes' type='stringlist'>
-  </option>
-  <option  id='EXPAND_AS_DEFINED' default='yes' type='stringlist'>
-  </option>
-  <option  id='SKIP_FUNCTION_MACROS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='TAGFILES' default='yes' type='stringlist'>
-  </option>
-  <option  id='GENERATE_TAGFILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='ALLEXTERNALS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='EXTERNAL_GROUPS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='EXTERNAL_PAGES' default='yes' type='bool'><value>YES</value></option>
-  <option  id='HIDE_UNDOC_RELATIONS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='HAVE_DOT' default='yes' type='bool'><value>YES</value></option>
-  <option  id='DOT_NUM_THREADS' default='yes' type='int'><value>0</value></option>
-  <option  id='DOT_COMMON_ATTR' default='yes' type='string'><value><![CDATA["fontname=Helvetica,fontsize=10"]]></value></option>
-  <option  id='DOT_EDGE_ATTR' default='yes' type='string'><value><![CDATA["labelfontname=Helvetica,labelfontsize=10"]]></value></option>
-  <option  id='DOT_NODE_ATTR' default='yes' type='string'><value><![CDATA["shape=box,height=0.2,width=0.4"]]></value></option>
-  <option  id='DOT_FONTPATH' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='CLASS_GRAPH' default='yes' type='string'><value>YES</value></option>
-  <option  id='COLLABORATION_GRAPH' default='no' type='bool'><value>NO</value></option>
-  <option  id='GROUP_GRAPHS' default='yes' type='bool'><value>YES</value></option>
-  <option  id='UML_LOOK' default='yes' type='bool'><value>NO</value></option>
-  <option  id='UML_LIMIT_NUM_FIELDS' default='yes' type='int'><value>10</value></option>
-  <option  id='DOT_UML_DETAILS' default='yes' type='string'><value>NO</value></option>
-  <option  id='DOT_WRAP_THRESHOLD' default='yes' type='int'><value>17</value></option>
-  <option  id='TEMPLATE_RELATIONS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='INCLUDE_GRAPH' default='yes' type='bool'><value>YES</value></option>
-  <option  id='INCLUDED_BY_GRAPH' default='yes' type='bool'><value>YES</value></option>
-  <option  id='CALL_GRAPH' default='no' type='bool'><value>YES</value></option>
-  <option  id='CALLER_GRAPH' default='no' type='bool'><value>YES</value></option>
-  <option  id='GRAPHICAL_HIERARCHY' default='yes' type='bool'><value>YES</value></option>
-  <option  id='DIRECTORY_GRAPH' default='yes' type='bool'><value>YES</value></option>
-  <option  id='DIR_GRAPH_MAX_DEPTH' default='yes' type='int'><value>1</value></option>
-  <option  id='DOT_IMAGE_FORMAT' default='no' type='string'><value>gif</value></option>
-  <option  id='INTERACTIVE_SVG' default='yes' type='bool'><value>NO</value></option>
-  <option  id='DOT_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='DOTFILE_DIRS' default='yes' type='stringlist'>
-  </option>
-  <option  id='DIA_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='DIAFILE_DIRS' default='yes' type='stringlist'>
-  </option>
-  <option  id='PLANTUML_JAR_PATH' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='PLANTUML_CFG_FILE' default='yes' type='string'><value><![CDATA[]]></value></option>
-  <option  id='PLANTUML_INCLUDE_PATH' default='yes' type='stringlist'>
-  </option>
-  <option  id='DOT_GRAPH_MAX_NODES' default='yes' type='int'><value>50</value></option>
-  <option  id='MAX_DOT_GRAPH_DEPTH' default='yes' type='int'><value>0</value></option>
-  <option  id='DOT_MULTI_TARGETS' default='yes' type='bool'><value>NO</value></option>
-  <option  id='GENERATE_LEGEND' default='yes' type='bool'><value>YES</value></option>
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diff --git a/doxyxml/_add_disk_8_h.xml b/doxyxml/_add_disk_8_h.xml
deleted file mode 100644
index f482ced..0000000
--- a/doxyxml/_add_disk_8_h.xml
+++ /dev/null
@@ -1,204 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <includedby refid="_disk_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</includedby>
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</label>
-        <link refid="_disk2d_halo_8_h"/>
-      </node>
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</label>
-        <link refid="_disk_halo_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_add_disk" prot="public">AddDisk</innerclass>
-    <briefdescription>
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-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_AddDisk_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_AddDisk_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
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diff --git a/doxyxml/_add_spheres_8_h.xml b/doxyxml/_add_spheres_8_h.xml
deleted file mode 100644
index 58a2274..0000000
--- a/doxyxml/_add_spheres_8_h.xml
+++ /dev/null
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-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17" refid="class_add_spheres_1a6dece412a3047494f11d3fa009b7ccd2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_add_spheres_1a6dece412a3047494f11d3fa009b7ccd2" kindref="member">number</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>4000</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_add_spheres_1a621ade4cdab73c005a0d0525d1d60572" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_add_spheres_1a621ade4cdab73c005a0d0525d1d60572" kindref="member">Rmin</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>1.0e-3</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_add_spheres_1ae8f1711667f56246e8d361f0be99a76a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_add_spheres_1ae8f1711667f56246e8d361f0be99a76a" kindref="member">use_mpi</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>false</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_add_spheres_1ae2e8657f7c5f96217577711160474281" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_add_spheres_1ae2e8657f7c5f96217577711160474281" kindref="member">logarithmic</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>false</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_add_spheres_1a14936f882986f3637e99fc1e106a25ae" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_add_spheres_1a14936f882986f3637e99fc1e106a25ae" kindref="member">AddSpheres</ref>(std::shared_ptr&lt;AxiSymModel&gt;<sp/>halo,</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/>bulge,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_add_spheres_1a3752c393a87e30bbd5bde2e9f9ce9148" kindref="member">bmass</ref>);</highlight></codeline>
-<codeline lineno="24" refid="class_add_spheres_1a1cdbd6f1b653867756e486a1a07d6616" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_add_spheres_1a1cdbd6f1b653867756e486a1a07d6616" kindref="member">~AddSpheres</ref>();</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_add_spheres_1a8c643a0063ee1e86169ae4b6eda411a8" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SphericalModelTable&gt;<sp/><ref refid="class_add_spheres_1a8c643a0063ee1e86169ae4b6eda411a8" kindref="member">get_model</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_add_spheres_1a03a4dee83a71f5d3bd7e4c8f41b42681" kindref="member">mod</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/AddSpheres.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_ascii_histo_8_h.xml b/doxyxml/_ascii_histo_8_h.xml
deleted file mode 100644
index e88ce7e..0000000
--- a/doxyxml/_ascii_histo_8_h.xml
+++ /dev/null
@@ -1,224 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_ascii_histo_8_h" kind="file" language="C++">
-    <compoundname>AsciiHisto.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">memory</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/AsciiHisto.H</label>
-        <link refid="_ascii_histo_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>iomanip</label>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="5">
-        <label>memory</label>
-      </node>
-      <node id="4">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_ascii_histo" prot="public">AsciiHisto</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="_ascii_histo_8_h_1a089603d2f53c242ffa927b5c7dca85df" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_ascii_histo" kindref="compound">AsciiHisto</ref>&lt; double &gt; &gt;</type>
-        <definition>typedef std::shared_ptr&lt; AsciiHisto&lt;double &gt; &gt; ahistoDPtr</definition>
-        <argsstring></argsstring>
-        <name>ahistoDPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/AsciiHisto.H" line="142" column="25" bodyfile="/home/weinberg/Projects/EXP/include/AsciiHisto.H" bodystart="142" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="_ascii_histo_8_h_1a9a5321ff5c1106950441354b86e778ce" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_ascii_histo" kindref="compound">AsciiHisto</ref>&lt; int &gt; &gt;</type>
-        <definition>typedef std::shared_ptr&lt; AsciiHisto&lt;int &gt; &gt; ahistoIPtr</definition>
-        <argsstring></argsstring>
-        <name>ahistoIPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/AsciiHisto.H" line="143" column="25" bodyfile="/home/weinberg/Projects/EXP/include/AsciiHisto.H" bodystart="143" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="_ascii_histo_8_h_1abef8efd01b2f7ddf3d56e612829d8392" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_ascii_histo" kindref="compound">AsciiHisto</ref>&lt; unsigned &gt; &gt;</type>
-        <definition>typedef std::shared_ptr&lt; AsciiHisto&lt;unsigned&gt; &gt; ahistoUPtr</definition>
-        <argsstring></argsstring>
-        <name>ahistoUPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/AsciiHisto.H" line="141" column="25" bodyfile="/home/weinberg/Projects/EXP/include/AsciiHisto.H" bodystart="141" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_AsciiHisto_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_AsciiHisto_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T<sp/>=<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;</highlight></codeline>
-<codeline lineno="12" refid="class_ascii_histo" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_ascii_histo" kindref="compound">AsciiHisto</ref></highlight></codeline>
-<codeline lineno="13"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;unsigned&gt;<sp/><ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" refkind="member"><highlight class="normal"><sp/><sp/>T<sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref>,<sp/><ref refid="class_ascii_histo_1afe22d53db3542c836de31ea1eb533511" kindref="member">end</ref>,<sp/><ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref>;</highlight></codeline>
-<codeline lineno="18" refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_ascii_histo_1a627028cf3e16f0c952d97cbee143a53d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ascii_histo_1a627028cf3e16f0c952d97cbee143a53d" kindref="member">makeBins</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nbins)</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(d.size())<sp/>{</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref><sp/>=<sp/>*std::min_element(d.begin(),<sp/>d.end());</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1afe22d53db3542c836de31ea1eb533511" kindref="member">end</ref><sp/>=<sp/>*std::max_element(d.begin(),<sp/>d.end());</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref>&lt;=0.0)<sp/></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref><sp/>=<sp/>log(<ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref>);</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1afe22d53db3542c836de31ea1eb533511" kindref="member">end</ref><sp/>=<sp/>log(<ref refid="class_ascii_histo_1afe22d53db3542c836de31ea1eb533511" kindref="member">end</ref>);</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(nbins==0)<sp/>nbins<sp/>=<sp/>floor(sqrt(d.size()));</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref><sp/><sp/>=<sp/>(<ref refid="class_ascii_histo_1afe22d53db3542c836de31ea1eb533511" kindref="member">end</ref><sp/>-<sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref>)/nbins;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref>==0)<sp/>{</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>nbins<sp/>=<sp/><ref refid="class_ascii_histo_1afe22d53db3542c836de31ea1eb533511" kindref="member">end</ref><sp/>-<sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref><sp/>+<sp/>1;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref><sp/>=<sp/>1;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>.resize(nbins,<sp/>0);</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>v<sp/>:<sp/>d)<sp/>{</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(not<sp/>std::isnan(v)<sp/>and<sp/>not<sp/>std::isinf(v))<sp/>{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(v&lt;=0.0)<sp/></highlight><highlight class="keywordflow">continue</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>v<sp/>=<sp/>log(v);</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>indx<sp/>=<sp/>floor(<sp/>(v<sp/>-<sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref>)/<ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref><sp/>);</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(indx&gt;=0<sp/>and<sp/>indx<sp/>&lt;<sp/>nbins)<sp/><ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>[floor(<sp/>(v<sp/>-<sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref>)/<ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref><sp/>)]++;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_ascii_histo_1ab82f12138ede22ad250ec4c7a8675385" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ascii_histo_1ab82f12138ede22ad250ec4c7a8675385" kindref="member">AsciiHisto</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;&amp;<sp/>data,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nbins,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="_sutils_8_h_1a6ef734356291c638e5787a6c668192d4" kindref="member">trim</ref>,</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>logV=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/>:<sp/><ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref>(logV)</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="_sutils_8_h_1a6ef734356291c638e5787a6c668192d4" kindref="member">trim</ref>&gt;0.0)<sp/>{</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;T&gt;<sp/>d(data);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::sort(d.begin(),<sp/>d.end());</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>lower<sp/>=<sp/>floor(<ref refid="_sutils_8_h_1a6ef734356291c638e5787a6c668192d4" kindref="member">trim</ref>*d.size());</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>upper<sp/>=<sp/>floor((1.0-<ref refid="_sutils_8_h_1a6ef734356291c638e5787a6c668192d4" kindref="member">trim</ref>)*d.size());</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>d.erase(d.begin()+upper,<sp/>d.end());</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>d.erase(d.begin(),<sp/>d.begin()+lower);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a627028cf3e16f0c952d97cbee143a53d" kindref="member">makeBins</ref>(d,<sp/>nbins);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a627028cf3e16f0c952d97cbee143a53d" kindref="member">makeBins</ref>(data,<sp/>nbins);</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_ascii_histo_1aab7726dca5cfda84a824c94a99ac412c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ascii_histo_1aab7726dca5cfda84a824c94a99ac412c" kindref="member">AsciiHisto</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nbins=0,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>logV=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/>:<sp/><ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref>(logV)</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a627028cf3e16f0c952d97cbee143a53d" kindref="member">makeBins</ref>(d,<sp/>nbins);</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_ascii_histo_1ad835bd7dc4e56681ecf4408883f56bfb" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ascii_histo_1ad835bd7dc4e56681ecf4408883f56bfb" kindref="member">AsciiHisto</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;unsigned&gt;&amp;<sp/>inbins,</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T&amp;<sp/>inBeg,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T&amp;<sp/>inEnd,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>logV=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/>:<sp/><ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref>(logV)</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref><sp/>=<sp/>inbins;</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref><sp/><sp/>=<sp/>inBeg;</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1afe22d53db3542c836de31ea1eb533511" kindref="member">end</ref><sp/><sp/>=<sp/>inEnd;</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref><sp/><sp/><sp/>=<sp/>(<ref refid="class_ascii_histo_1afe22d53db3542c836de31ea1eb533511" kindref="member">end</ref><sp/>-<sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref>)/<ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>.size();</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_ascii_histo_1ae482bd51c52a4e335b85aeca75749ee8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ascii_histo_1ae482bd51c52a4e335b85aeca75749ee8" kindref="member">operator()</ref>(std::ostream<sp/>&amp;out,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>hwid=60)</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>.size()<sp/>==<sp/>0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>wid<sp/><sp/>=<sp/><ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref><sp/>?<sp/>16<sp/>:<sp/>12;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>maxb<sp/>=<sp/>*std::max_element(<ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>.begin(),<sp/><ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>.end());</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><sp/><sp/>hscl<sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(hwid)/maxb;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/>sep(</highlight><highlight class="stringliteral">&quot;<sp/>|<sp/>&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>(2*wid<sp/>+<sp/>4<sp/>+<sp/>2*sep.size()<sp/>+<sp/>hwid<sp/>+<sp/>10,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;[&quot;</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(wid)<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;bin<sp/>low&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;,<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(wid)<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;bin<sp/>high&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;]&quot;</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(2*sep.size()<sp/>+<sp/>hwid)<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::left</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(10)<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Counts&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/><ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;<ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>.size();<sp/>j++)<sp/>{</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>T<sp/>lower<sp/>=<sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref><sp/>+<sp/><ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref>*(j+0);</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>T<sp/>upper<sp/>=<sp/><ref refid="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" kindref="member">beg</ref><sp/>+<sp/><ref refid="class_ascii_histo_1a6f5388a2e71d21b017bd6acc86ebd24d" kindref="member">dx</ref>*(j+1);</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ascii_histo_1ae7d420d32a094780f7d327a30c6d648b" kindref="member">logH</ref>)<sp/>{<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Print<sp/>out<sp/>decimal<sp/>bin<sp/>edges<sp/>for<sp/>log</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>lower<sp/>=<sp/>exp(lower);<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>scaled<sp/>bins</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>upper<sp/>=<sp/>exp(upper);</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;[&quot;</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(wid)<sp/>&lt;&lt;<sp/>lower<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;,<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(wid)<sp/>&lt;&lt;<sp/>upper<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;]&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>sep;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>cnt<sp/>=<sp/>floor(hscl*<ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>[j]);</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/>sout.str()<sp/>&lt;&lt;<sp/>std::setw(hwid)<sp/>&lt;&lt;<sp/>std::string(cnt,<sp/></highlight><highlight class="charliteral">&apos;=&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>sep<sp/>&lt;&lt;<sp/>std::setw(10)<sp/>&lt;&lt;<sp/><ref refid="class_ascii_histo_1a7c8bbea752a7f0588fbfb5b9fc646c2a" kindref="member">bins</ref>[j]<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/><ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="139"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="_ascii_histo_8_h_1abef8efd01b2f7ddf3d56e612829d8392" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;<sp/>AsciiHisto&lt;unsigned&gt;<sp/>&gt;<sp/><ref refid="_ascii_histo_8_h_1abef8efd01b2f7ddf3d56e612829d8392" kindref="member">ahistoUPtr</ref>;</highlight></codeline>
-<codeline lineno="142" refid="_ascii_histo_8_h_1a089603d2f53c242ffa927b5c7dca85df" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;<sp/>AsciiHisto&lt;double<sp/><sp/>&gt;<sp/>&gt;<sp/><ref refid="_ascii_histo_8_h_1a089603d2f53c242ffa927b5c7dca85df" kindref="member">ahistoDPtr</ref>;</highlight></codeline>
-<codeline lineno="143" refid="_ascii_histo_8_h_1a9a5321ff5c1106950441354b86e778ce" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;<sp/>AsciiHisto&lt;int<sp/><sp/><sp/><sp/><sp/>&gt;<sp/>&gt;<sp/><ref refid="_ascii_histo_8_h_1a9a5321ff5c1106950441354b86e778ce" kindref="member">ahistoIPtr</ref>;</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/AsciiHisto.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_axisymmetric_basis_8_h.xml b/doxyxml/_axisymmetric_basis_8_h.xml
deleted file mode 100644
index 7454b17..0000000
--- a/doxyxml/_axisymmetric_basis_8_h.xml
+++ /dev/null
@@ -1,372 +0,0 @@
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-    <includes local="no">Eigen/Eigen</includes>
-    <includedby refid="_direct_8_h" local="no">/home/weinberg/Projects/EXP/src/Direct.H</includedby>
-    <includedby refid="_periodic_b_c_8_h" local="no">/home/weinberg/Projects/EXP/src/PeriodicBC.H</includedby>
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-    <includedby refid="_shells_8_h" local="no">/home/weinberg/Projects/EXP/src/Shells.H</includedby>
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-    <includedby refid="_user_disk_8_h" local="no">/home/weinberg/Projects/EXP/src/user/UserDisk.H</includedby>
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-    <innerclass refid="class_axisymmetric_basis" prot="public">AxisymmetricBasis</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
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-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="99"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(from.size()<sp/>!=<sp/>to.size())<sp/>{</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;swap_coefs:<sp/>size(from)=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>from.size()<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>!=<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/>from<sp/>=<sp/>to;</highlight></codeline>
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-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166" refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6" kindref="member">TKType</ref><sp/>{</highlight></codeline>
-<codeline lineno="167" refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a355c2a93725cd932da5408330dec2a6b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a355c2a93725cd932da5408330dec2a6b" kindref="member">Hall</ref>,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="168" refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a27bdb8b3a4040b794e7418581fda2615" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a27bdb8b3a4040b794e7418581fda2615" kindref="member">VarianceCut</ref>,<sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="169" refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a1dbf0ed28469f49a393a25a7b67753c3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a1dbf0ed28469f49a393a25a7b67753c3" kindref="member">CumulativeCut</ref>,<sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="170" refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a7381bdf9e2231e55827cf72d86f7f415" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a7381bdf9e2231e55827cf72d86f7f415" kindref="member">VarianceWeighted</ref>,<sp/></highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a85300903a059bd6e3a193bd92112a16f" kindref="member">None</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="172" refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a85300903a059bd6e3a193bd92112a16f" refkind="member"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight></codeline>
-<codeline lineno="175" refid="class_axisymmetric_basis_1ab965e325410d79d567903f51dd2c6dd0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_axisymmetric_basis_1ab965e325410d79d567903f51dd2c6dd0" kindref="member">AxisymmetricBasis</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>line);</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"></highlight></codeline>
-<codeline lineno="178" refid="class_axisymmetric_basis_1a98dbe87cedd6dc28d03bba5aba133dd4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1a98dbe87cedd6dc28d03bba5aba133dd4" kindref="member">~AxisymmetricBasis</ref>();</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="182" refid="class_axisymmetric_basis_1a408a19fff1093c88f6a9bcf9ad2601d4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1a408a19fff1093c88f6a9bcf9ad2601d4" kindref="member">pca_hall</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" kindref="member">compute</ref>);<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Choose<sp/>between<sp/>2d<sp/>and<sp/>3d</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="183" refid="class_axisymmetric_basis_1ae0353b5d1b82b19517ede95a862d7484" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1ae0353b5d1b82b19517ede95a862d7484" kindref="member">pca_hall_2d</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" kindref="member">compute</ref>);<sp/></highlight><highlight class="comment">//<sp/>2d-polar<sp/>implementation</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="184" refid="class_axisymmetric_basis_1ab971c10417b2e844c9251d6a667103d4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1ab971c10417b2e844c9251d6a667103d4" kindref="member">pca_hall_3d</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" kindref="member">compute</ref>);<sp/></highlight><highlight class="comment">//<sp/>3d<sp/>spherical<sp/>harmonic<sp/>implementation</highlight></codeline>
-<codeline lineno="186"></codeline>
-<codeline lineno="188" refid="class_axisymmetric_basis_1a93d8a3c0e104139477fec734a6baf8e6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1a93d8a3c0e104139477fec734a6baf8e6" kindref="member">multistep_reset</ref>()<sp/>{<sp/><ref refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" kindref="member">used</ref>=0;<sp/>}</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191" refid="class_axisymmetric_basis_1a6af1bcb2359adc5091625d457a953efa" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6" kindref="member">TKType</ref><sp/><ref refid="class_axisymmetric_basis_1a6af1bcb2359adc5091625d457a953efa" kindref="member">setTK</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>tk);</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194" refid="class_axisymmetric_basis_1a81196ff99fb4254c4e37866ca3d2c7de" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_axisymmetric_basis_1a90258bc4c31858abd74719a452f7f807" kindref="member">VectorP</ref><sp/><ref refid="class_axisymmetric_basis_1a81196ff99fb4254c4e37866ca3d2c7de" kindref="member">getCoefs</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1afae69589bd4f7341ab42b8c48c22b707" kindref="member">expcoef</ref>[l];<sp/>}</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198" refid="class_axisymmetric_basis_1a392660898c9be95471072adb3f0faa25" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1a392660898c9be95471072adb3f0faa25" kindref="member">getLmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1abed8db010c45ad27e769043c68ab3101" kindref="member">Lmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="199" refid="class_axisymmetric_basis_1ab09be7b0782949e27379ea930eb10171" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1ab09be7b0782949e27379ea930eb10171" kindref="member">getMmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1a2307130cf92a81e6cfb6f69fb2279585" kindref="member">Mmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="201"></codeline>
-<codeline lineno="203" refid="class_axisymmetric_basis_1a3026462dfa88e923d7673f3d56dc4de4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1a3026462dfa88e923d7673f3d56dc4de4" kindref="member">getNmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="207" refid="class_axisymmetric_basis_1a77c3332bf7286f04c94af7d068c7b2c4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axisymmetric_basis_1a570f3d24187073d3354933ace93a6bd6" kindref="member">Ldim</ref>,<sp/><ref refid="class_axisymmetric_basis_1a77c3332bf7286f04c94af7d068c7b2c4" kindref="member">L0</ref>;</highlight></codeline>
-<codeline lineno="208" refid="class_axisymmetric_basis_1ae6dd8f205982c2e3ef87f6f467976018" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1ae6dd8f205982c2e3ef87f6f467976018" kindref="member">fac02</ref>,<sp/><ref refid="class_axisymmetric_basis_1ad4dabce5bd04809a4644cb36705312f9" kindref="member">tksmooth</ref>,<sp/><ref refid="class_axisymmetric_basis_1a3a98442a6149253a6881c33cf6792e38" kindref="member">tkcum</ref>;</highlight></codeline>
-<codeline lineno="209" refid="class_axisymmetric_basis_1a3e85225ea1c3c408fe2bcf23ad09b555" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6" kindref="member">TKType</ref><sp/><ref refid="class_axisymmetric_basis_1a3e85225ea1c3c408fe2bcf23ad09b555" kindref="member">tk_type</ref>;</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211" refid="class_axisymmetric_basis_1a52873b88250c954ccca613fab178c5ee" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axisymmetric_basis_1a52873b88250c954ccca613fab178c5ee" kindref="member">smth</ref>;</highlight></codeline>
-<codeline lineno="212" refid="class_axisymmetric_basis_1a3708ccfcde62cc3e88dbde5994d08f26" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_axisymmetric_basis_1a3708ccfcde62cc3e88dbde5994d08f26" kindref="member">weight</ref>;</highlight></codeline>
-<codeline lineno="213" refid="class_axisymmetric_basis_1a5116daa842c0f604c2a312db8e0ce97e" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_axisymmetric_basis_1a5116daa842c0f604c2a312db8e0ce97e" kindref="member">s_Hall</ref>;</highlight></codeline>
-<codeline lineno="214" refid="class_axisymmetric_basis_1aa4fc18ccf44bdf56ac60b7caa68b1cfc" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_axisymmetric_basis_1aa4fc18ccf44bdf56ac60b7caa68b1cfc" kindref="member">b_Hall</ref>;</highlight></codeline>
-<codeline lineno="215" refid="class_axisymmetric_basis_1abe6cac911f0415ee15378c104bd3fd16" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axisymmetric_basis_1abe6cac911f0415ee15378c104bd3fd16" kindref="member">inv</ref>;</highlight></codeline>
-<codeline lineno="216" refid="class_axisymmetric_basis_1a45362e008f1389402494647b75931e1e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axisymmetric_basis_1a45362e008f1389402494647b75931e1e" kindref="member">eval</ref>;</highlight></codeline>
-<codeline lineno="217" refid="class_axisymmetric_basis_1a739cec07895fdd02850006d6a52639a8" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axisymmetric_basis_1a739cec07895fdd02850006d6a52639a8" kindref="member">cuml</ref>;</highlight></codeline>
-<codeline lineno="218" refid="class_axisymmetric_basis_1ae30dc4a6d54a9b90dbe31e2b03821382" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_axisymmetric_basis_1ae30dc4a6d54a9b90dbe31e2b03821382" kindref="member">evec</ref>;</highlight></codeline>
-<codeline lineno="219" refid="class_axisymmetric_basis_1a196db3f26a946c2dcbaabcbe31883b4a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_axisymmetric_basis_1a196db3f26a946c2dcbaabcbe31883b4a" kindref="member">Tevec</ref>;</highlight></codeline>
-<codeline lineno="220" refid="class_axisymmetric_basis_1a7bd4492f833f728f99891d38b7493631" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_axisymmetric_basis_1a7bd4492f833f728f99891d38b7493631" kindref="member">covar</ref>;</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"></highlight></codeline>
-<codeline lineno="222"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight></codeline>
-<codeline lineno="225"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>_AxisymmetricBasis_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_b_n_8_h.xml b/doxyxml/_b_n_8_h.xml
deleted file mode 100644
index 0b96070..0000000
--- a/doxyxml/_b_n_8_h.xml
+++ /dev/null
@@ -1,146 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_b_n_8_h" kind="file" language="C++">
-    <compoundname>BN.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">cmath</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/BN.H</label>
-        <link refid="_b_n_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>cmath</label>
-      </node>
-      <node id="3">
-        <label>iomanip</label>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="4">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="classcoulomb_select" prot="public">coulombSelect</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_BN_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_BN_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12" refid="classcoulomb_select" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcoulomb_select" kindref="compound">coulombSelect</ref></highlight></codeline>
-<codeline lineno="13"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="classcoulomb_select_1a25699c4ca601303413e487bcf9f1522c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classcoulomb_select_1a25699c4ca601303413e487bcf9f1522c" kindref="member">f</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/tanh(x)<sp/>-<sp/>1.0/x;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="classcoulomb_select_1a7e69b497d26413bb994b71e8104827bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classcoulomb_select_1a7e69b497d26413bb994b71e8104827bc" kindref="member">deriv</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x&gt;100.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/(x*x);</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z<sp/>=<sp/>sinh(x);</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/(x*x)<sp/>-<sp/>1.0/(z*z);</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="classcoulomb_select_1a873ee9ee22a9579fc5b13f7a7c4667fc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classcoulomb_select_1a873ee9ee22a9579fc5b13f7a7c4667fc" kindref="member">func</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>tau,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>tol<sp/>=<sp/>1.0e-12;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>itmax<sp/><sp/>=<sp/>1000;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fac<sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>exp(-2.0*tau),<sp/>corr;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;itmax;<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>corr<sp/><sp/>=<sp/>(<ref refid="classcoulomb_select_1a25699c4ca601303413e487bcf9f1522c" kindref="member">f</ref>(x)<sp/>-<sp/>fac)/<ref refid="classcoulomb_select_1a7e69b497d26413bb994b71e8104827bc" kindref="member">deriv</ref>(x);</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>x<sp/><sp/><sp/><sp/>-=<sp/>corr;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fabs(corr)&lt;tol)<sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>x;</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="classcoulomb_select_1a6a5af9d3c31a90830fe6c099603fcc8a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classcoulomb_select_1a252f9b0d6f53b944cc53cf761afeb9cc" kindref="member">tau_i</ref><sp/>=<sp/>0.0001,<sp/><ref refid="classcoulomb_select_1a7aa9114a8f06d85fe2ecbddd14d7de6c" kindref="member">tau_m</ref><sp/>=<sp/>1.0e-8,<sp/><ref refid="classcoulomb_select_1a6a5af9d3c31a90830fe6c099603fcc8a" kindref="member">tau_f</ref><sp/>=<sp/>4.0,<sp/><ref refid="classcoulomb_select_1ade93bccff7b5fbf98914a56b191703f7" kindref="member">tau_z</ref><sp/>=<sp/>40.0;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="classcoulomb_select_1aa84ee2e92783c66ee25abd0cd548827b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="classcoulomb_select_1aa84ee2e92783c66ee25abd0cd548827b" kindref="member">numT</ref><sp/>=<sp/>2000;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="classcoulomb_select_1aadead4c37b5f3df4688fee34e39012fe" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>,<sp/><ref refid="classcoulomb_select_1aadead4c37b5f3df4688fee34e39012fe" kindref="member">cA</ref>;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="56" refid="classcoulomb_select_1a68b1ba64d4220d9be986665d66875d84" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classcoulomb_select_1a68b1ba64d4220d9be986665d66875d84" kindref="member">coulombSelect</ref>()</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>.resize(<ref refid="classcoulomb_select_1aa84ee2e92783c66ee25abd0cd548827b" kindref="member">numT</ref>);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcoulomb_select_1aadead4c37b5f3df4688fee34e39012fe" kindref="member">cA</ref>.resize(<ref refid="classcoulomb_select_1aa84ee2e92783c66ee25abd0cd548827b" kindref="member">numT</ref>);</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>del<sp/>=<sp/>(log(<ref refid="classcoulomb_select_1a6a5af9d3c31a90830fe6c099603fcc8a" kindref="member">tau_f</ref>)<sp/>-<sp/>log(<ref refid="classcoulomb_select_1a252f9b0d6f53b944cc53cf761afeb9cc" kindref="member">tau_i</ref>))/(<ref refid="classcoulomb_select_1aa84ee2e92783c66ee25abd0cd548827b" kindref="member">numT</ref>-1);</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A<sp/><sp/><sp/>=<sp/>0.5/<ref refid="classcoulomb_select_1a252f9b0d6f53b944cc53cf761afeb9cc" kindref="member">tau_i</ref>;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;<ref refid="classcoulomb_select_1aa84ee2e92783c66ee25abd0cd548827b" kindref="member">numT</ref>;<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>[i]<sp/>=<sp/><ref refid="classcoulomb_select_1a252f9b0d6f53b944cc53cf761afeb9cc" kindref="member">tau_i</ref>*exp(del*i);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcoulomb_select_1aadead4c37b5f3df4688fee34e39012fe" kindref="member">cA</ref>[i]<sp/>=<sp/>A<sp/>=<sp/><ref refid="classcoulomb_select_1a873ee9ee22a9579fc5b13f7a7c4667fc" kindref="member">func</ref>(<ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>[i],<sp/>A);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="classcoulomb_select_1a9ad69d33e33506c4d9a4e9ad7163b0fb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classcoulomb_select_1a9ad69d33e33506c4d9a4e9ad7163b0fb" kindref="member">eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>tau)</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Elastic<sp/>limit</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>(tau<sp/>&gt;=<sp/><ref refid="classcoulomb_select_1ade93bccff7b5fbf98914a56b191703f7" kindref="member">tau_z</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Large<sp/>tau<sp/>asymptotic<sp/>behavior</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tau<sp/>&gt;=<sp/><ref refid="classcoulomb_select_1a6a5af9d3c31a90830fe6c099603fcc8a" kindref="member">tau_f</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>3.0*exp(-2.0*tau);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Limiting<sp/>value<sp/>tiny<sp/>tau</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tau<sp/>&lt;=<sp/><ref refid="classcoulomb_select_1a7aa9114a8f06d85fe2ecbddd14d7de6c" kindref="member">tau_m</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/(2.0*<ref refid="classcoulomb_select_1a7aa9114a8f06d85fe2ecbddd14d7de6c" kindref="member">tau_m</ref>);</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Small<sp/>tau<sp/>asumptotic<sp/>behavior</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tau<sp/>&lt;=<sp/><ref refid="classcoulomb_select_1a252f9b0d6f53b944cc53cf761afeb9cc" kindref="member">tau_i</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/(2.0*tau);</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>the<sp/>grid<sp/>for<sp/>intermediate<sp/>values</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>it<sp/><sp/><sp/><sp/>=<sp/>std::lower_bound(<ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>.begin(),<sp/><ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>.end(),<sp/>tau);</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>indx<sp/><sp/><sp/>=<sp/>std::distance(<ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>.begin(),<sp/>it);</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>lo<sp/><sp/>=<sp/><ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>[indx-1];</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>hi<sp/><sp/>=<sp/><ref refid="classcoulomb_select_1ab7721c9758ac3bca9ebced990c7ddc06" kindref="member">cT</ref>[indx];</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>del<sp/>=<sp/>hi<sp/>-<sp/>lo;</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A<sp/><sp/><sp/>=<sp/>(hi<sp/>-<sp/>tau)/del;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>B<sp/><sp/><sp/>=<sp/>(tau<sp/>-<sp/>lo)/del;</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>A*<ref refid="classcoulomb_select_1aadead4c37b5f3df4688fee34e39012fe" kindref="member">cA</ref>[indx-1]<sp/>+<sp/>B*<ref refid="classcoulomb_select_1aadead4c37b5f3df4688fee34e39012fe" kindref="member">cA</ref>[indx];</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="classcoulomb_select_1a04e3019374e0fb5b397ac7a7143610d9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classcoulomb_select_1a04e3019374e0fb5b397ac7a7143610d9" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>tau,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>U)</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A<sp/>=<sp/><ref refid="classcoulomb_select_1a9ad69d33e33506c4d9a4e9ad7163b0fb" kindref="member">eval</ref>(tau);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(U&lt;1.0e-14)</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-1.0;</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(A&lt;1.0e-10)</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*U<sp/>-<sp/>1.0;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(A&gt;40.0)</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0<sp/>+<sp/>log(U)/A;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>log(exp(-A)<sp/>+<sp/>2.0*U*sinh(A))/A;</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>_BN_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/BN.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_b_w_helper_8_h.xml b/doxyxml/_b_w_helper_8_h.xml
deleted file mode 100644
index b00b3d8..0000000
--- a/doxyxml/_b_w_helper_8_h.xml
+++ /dev/null
@@ -1,102 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_b_w_helper_8_h" kind="file" language="C++">
-    <compoundname>BWHelper.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">string</includes>
-    <includes local="no">limits</includes>
-    <includes local="no">set</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/BWHelper.H</label>
-        <link refid="_b_w_helper_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>iomanip</label>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="6">
-        <label>limits</label>
-      </node>
-      <node id="7">
-        <label>set</label>
-      </node>
-      <node id="5">
-        <label>string</label>
-      </node>
-      <node id="4">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="classbw__struct" prot="public">bw_struct</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>-*-<sp/>C++<sp/>-*-</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_BWHelper_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_BWHelper_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;limits&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;set&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">std;</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="classbw__struct" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classbw__struct" kindref="compound">bw_struct</ref><sp/></highlight></codeline>
-<codeline lineno="16"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="19" refid="classbw__struct_1a1431bc0cffe5a4d0b1b1a3b07f25cce7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="classbw__struct_1a1431bc0cffe5a4d0b1b1a3b07f25cce7" kindref="member">dt1</ref>;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="classbw__struct_1a59ad587205266e918655da76ee51837c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="classbw__struct_1a59ad587205266e918655da76ee51837c" kindref="member">dt2</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
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deleted file mode 100644
index 2d14d6c..0000000
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-<codeline lineno="23" refid="_barrier_wrapper_8_h_1a6ec85faa38de1a08236705734b4e2b26" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;MPI_Request&gt;<sp/><ref refid="_barrier_wrapper_8_h_1a6ec85faa38de1a08236705734b4e2b26" kindref="member">ReqPtr</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="class_info" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_info" kindref="compound">Info</ref><sp/></highlight></codeline>
-<codeline lineno="26"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_info_1a922d16ed2424941f901d2b3d8cb9b283" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;ReqPtr&gt;<sp/><ref refid="class_info_1a922d16ed2424941f901d2b3d8cb9b283" kindref="member">req</ref>;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_info_1a8d42af920c76114214bfb64ef2d79de0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_barrier_wrapper_8_h_1ae26886b3fffa4f2f48b62705e6f3af3c" kindref="member">CharPtr</ref><sp/><ref refid="class_info_1a8d42af920c76114214bfb64ef2d79de0" kindref="member">blob</ref>;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_info_1aed610960fd53086b4980108c4e55afde" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_info_1aed610960fd53086b4980108c4e55afde" kindref="member">pack</ref>();</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_info_1a0101cb4e81e7be204cd1b014c240b81e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="class_info_1a0101cb4e81e7be204cd1b014c240b81e" kindref="member">charsz</ref>;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_info_1a7694b537bb903cb465713894055b0d40" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="class_info_1a7694b537bb903cb465713894055b0d40" kindref="member">bufsz</ref><sp/>=<sp/>512;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_info_1a1424990335e09ca579fc999ac70bfd69" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_info_1a1424990335e09ca579fc999ac70bfd69" kindref="member">tag</ref><sp/>=<sp/>232395;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_info_1a29d7ba6e619944bb1f526f1dec716296" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_info_1a29d7ba6e619944bb1f526f1dec716296" kindref="member">own</ref>;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_info_1adc9a2e7d96d6e60c0bc2168b40f10393" refkind="member"><highlight class="normal"><sp/><sp/>time_t<sp/><ref refid="class_info_1adc9a2e7d96d6e60c0bc2168b40f10393" kindref="member">ctm</ref>;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_info_1ac93c661ae1e603848b08a17d8b3a8425" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_info_1ac93c661ae1e603848b08a17d8b3a8425" kindref="member">siz</ref>;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_info_1a0865142009d602af1879c5da53b9e06d" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_info_1a0865142009d602af1879c5da53b9e06d" kindref="member">s</ref>;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_info_1ac8c0c94aaf9a9a216fa3c2656b09f075" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_barrier_wrapper_8_h_1ae26886b3fffa4f2f48b62705e6f3af3c" kindref="member">CharPtr</ref><sp/><ref refid="class_info_1ac8c0c94aaf9a9a216fa3c2656b09f075" kindref="member">c</ref>;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_info_1a89823cdd427a9dfdf3d2e43d938222bd" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_info_1a89823cdd427a9dfdf3d2e43d938222bd" kindref="member">Info</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68" refid="class_info_1a070c079c7c2c7a737ed94a030510f695" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_info_1a070c079c7c2c7a737ed94a030510f695" kindref="member">Info</ref>(<ref refid="_barrier_wrapper_8_h_1ae26886b3fffa4f2f48b62705e6f3af3c" kindref="member">CharPtr</ref><sp/>p);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_info_1a7908d9cd4126d049c605fb578338b49d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_info_1a7908d9cd4126d049c605fb578338b49d" kindref="member">Info</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_info_1a29d7ba6e619944bb1f526f1dec716296" kindref="member">own</ref>,<sp/>time_t<sp/><ref refid="class_info_1adc9a2e7d96d6e60c0bc2168b40f10393" kindref="member">ctm</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="class_info_1a0865142009d602af1879c5da53b9e06d" kindref="member">s</ref>);</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_info_1ac60d7e4961259f8ff1a0be85ae7c4f6b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_info_1ac60d7e4961259f8ff1a0be85ae7c4f6b" kindref="member">sendInfo</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>,<sp/>MPI_Comm<sp/>comm,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>commsize);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="_barrier_wrapper_8_h_1a389903bdb1259585e65a834df5ef9dfc" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;Info&gt;<sp/><ref refid="_barrier_wrapper_8_h_1a389903bdb1259585e65a834df5ef9dfc" kindref="member">InfoPtr</ref>;</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81" refid="class_b_w_data" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_b_w_data" kindref="compound">BWData</ref><sp/></highlight></codeline>
-<codeline lineno="82"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="85" refid="class_b_w_data_1a5639d584c1f974831723d5e6126b1845" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_w_data_1a5639d584c1f974831723d5e6126b1845" kindref="member">dt1</ref>;</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_b_w_data_1a02e9ed51c8f35b62f99b2bc8a33e2cf6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_w_data_1a02e9ed51c8f35b62f99b2bc8a33e2cf6" kindref="member">dt2</ref>;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_b_w_data_1a4c5751ae28df283fd7d89ec6cd122df7" refkind="member"><highlight class="normal"><sp/><sp/>time_t<sp/><ref refid="class_b_w_data_1a4de1e9aea8379ae7cd9795a23c806a70" kindref="member">first</ref>,<sp/><ref refid="class_b_w_data_1a4c5751ae28df283fd7d89ec6cd122df7" kindref="member">expire</ref>;</highlight></codeline>
-<codeline lineno="94"></codeline>
-<codeline lineno="96" refid="class_b_w_data_1a1fa44f386c8eb0288e45dc619b39d09d" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;bool&gt;<sp/><ref refid="class_b_w_data_1a1fa44f386c8eb0288e45dc619b39d09d" kindref="member">nd</ref>;</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_b_w_data_1a3627f9db7360d51e67e687b7d10f2f55" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_b_w_data_1a3627f9db7360d51e67e687b7d10f2f55" kindref="member">nexpiry</ref>;</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_b_w_data_1a4675367000a64ca76df032e289646686" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_b_w_data_1a4675367000a64ca76df032e289646686" kindref="member">count</ref>;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_b_w_data_1a6d1c06f8df7a13f9533f7f0e0c21bd14" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;InfoPtr&gt;<sp/><ref refid="class_b_w_data_1a6d1c06f8df7a13f9533f7f0e0c21bd14" kindref="member">info</ref>;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_b_w_data_1a1b6cb9dd1ad85f70641ce6b44f932c05" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_b_w_data_1a1b6cb9dd1ad85f70641ce6b44f932c05" kindref="member">BWData</ref>(<ref refid="_barrier_wrapper_8_h_1a389903bdb1259585e65a834df5ef9dfc" kindref="member">InfoPtr</ref>&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>commsize);</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_b_w_data_1a6a719e9d4692633b72b918466e8cfc22" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_b_w_data_1a6a719e9d4692633b72b918466e8cfc22" kindref="member">Add</ref>(<ref refid="_barrier_wrapper_8_h_1a389903bdb1259585e65a834df5ef9dfc" kindref="member">InfoPtr</ref>&amp;<sp/>p);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_b_w_data_1a54dc7e71b841e5e48628b72fa60475fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_w_data_1a54dc7e71b841e5e48628b72fa60475fe" kindref="member">Owner</ref>();</highlight></codeline>
-<codeline lineno="115"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="_barrier_wrapper_8_h_1a593762cb19f616c1beb5486d07dbe458" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;BWData&gt;<sp/><ref refid="_barrier_wrapper_8_h_1a593762cb19f616c1beb5486d07dbe458" kindref="member">BWPtr</ref>;</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120" refid="class_barrier_wrapper" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_barrier_wrapper" kindref="compound">BarrierWrapper</ref></highlight></codeline>
-<codeline lineno="121"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="122" refid="class_barrier_wrapper_1a4838ff865b8d8625c61d208a420f8212" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_info" kindref="compound">Info</ref>;</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126" refid="class_barrier_wrapper_1a39928dc8d3ef7bc5aa6378fc6e28aa24" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::pair&lt;CharPtr,<sp/>ReqPtr&gt;<sp/><ref refid="class_barrier_wrapper_1a39928dc8d3ef7bc5aa6378fc6e28aa24" kindref="member">RecvElem</ref>;</highlight></codeline>
-<codeline lineno="127" refid="class_barrier_wrapper_1a181cd2663c55bdcaa89d2ac1fed8f83e" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;RecvElem&gt;<sp/><ref refid="class_barrier_wrapper_1a181cd2663c55bdcaa89d2ac1fed8f83e" kindref="member">req</ref>;</highlight></codeline>
-<codeline lineno="128" refid="class_barrier_wrapper_1a4baea7ae1daa15c18c30c047db6697f5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a4baea7ae1daa15c18c30c047db6697f5" kindref="member">queued</ref>;</highlight></codeline>
-<codeline lineno="129" refid="class_barrier_wrapper_1a904916ba24181cd01a77a1dd577aa57b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a904916ba24181cd01a77a1dd577aa57b" kindref="member">nrecv</ref>;</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"></highlight></codeline>
-<codeline lineno="131" refid="class_barrier_wrapper_1ae738138237618529147077d778dc9e55" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*<ref refid="class_barrier_wrapper_1ae738138237618529147077d778dc9e55" kindref="member">buffer</ref>,<sp/>*<ref refid="class_barrier_wrapper_1a3acf68552460aec4bec9be9e521db98a" kindref="member">bufferT</ref>;</highlight></codeline>
-<codeline lineno="132" refid="class_barrier_wrapper_1ad294be7c07634a25ec8938c62f996bad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1ad294be7c07634a25ec8938c62f996bad" kindref="member">commsize</ref>,<sp/><ref refid="class_barrier_wrapper_1a8274f2be4307090574f2cc82cbefd383" kindref="member">localid</ref>;</highlight></codeline>
-<codeline lineno="133" refid="class_barrier_wrapper_1aec4570a9b5a6579178f91c88d54b3d32" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1aec4570a9b5a6579178f91c88d54b3d32" kindref="member">check_label</ref>;</highlight></codeline>
-<codeline lineno="134" refid="class_barrier_wrapper_1ab99ca69ccd7d7919c0348c78a0ec7712" refkind="member"><highlight class="normal"><sp/><sp/>MPI_Comm<sp/><ref refid="class_barrier_wrapper_1ab99ca69ccd7d7919c0348c78a0ec7712" kindref="member">comm</ref>;</highlight></codeline>
-<codeline lineno="135" refid="class_barrier_wrapper_1a976b752d9985eeaca2aecff08d3e525e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_timer" kindref="compound">Timer</ref><sp/><ref refid="class_barrier_wrapper_1a976b752d9985eeaca2aecff08d3e525e" kindref="member">timer</ref>;</highlight></codeline>
-<codeline lineno="136" refid="class_barrier_wrapper_1aae1c8330ae2dd9755d090d53b98c6965" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1aae1c8330ae2dd9755d090d53b98c6965" kindref="member">onoff</ref>;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"></highlight></codeline>
-<codeline lineno="138" refid="class_barrier_wrapper_1a77884c06ab7fd62675c3cfd6120c10d0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a77884c06ab7fd62675c3cfd6120c10d0" kindref="member">light_operator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>&amp;label,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>line);</highlight></codeline>
-<codeline lineno="139" refid="class_barrier_wrapper_1a502821e5fc06a438a54b8782a5dda179" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a502821e5fc06a438a54b8782a5dda179" kindref="member">heavy_operator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>&amp;label,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>line);</highlight></codeline>
-<codeline lineno="140" refid="class_barrier_wrapper_1a3fc02666f88ab13bbaf9eb0b8453caca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a3fc02666f88ab13bbaf9eb0b8453caca" kindref="member">light</ref>;</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142" refid="class_barrier_wrapper_1a3199d76495e5a8ea46f50e6b34c05ca4" refkind="member"><highlight class="normal"><sp/><sp/>std::map&lt;std::string,<sp/>BWPtr&gt;<sp/><ref refid="class_barrier_wrapper_1a3199d76495e5a8ea46f50e6b34c05ca4" kindref="member">pending</ref>;</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168" refid="class_barrier_wrapper_1acc2b0dc6b21c70708ed7a357cda5681d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_barrier_wrapper_1acc2b0dc6b21c70708ed7a357cda5681d" kindref="member">verbose</ref>;</highlight></codeline>
-<codeline lineno="169" refid="class_barrier_wrapper_1ac43a8640a84bf5a397fc1d64b30904a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_barrier_wrapper_1ac43a8640a84bf5a397fc1d64b30904a4" kindref="member">extra_verbose</ref>;</highlight></codeline>
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-<codeline lineno="172"></codeline>
-<codeline lineno="174" refid="class_barrier_wrapper_1a46ea8fa6e581cb577fdefbf9ebf3e2d5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_barrier_wrapper_1a46ea8fa6e581cb577fdefbf9ebf3e2d5" kindref="member">loop_delay</ref>;</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight></codeline>
-<codeline lineno="177" refid="class_barrier_wrapper_1a27c637a2e5b2df1f7245dde9d2d3e47c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_barrier_wrapper_1a27c637a2e5b2df1f7245dde9d2d3e47c" kindref="member">BarrierWrapper</ref>(MPI_Comm<sp/><ref refid="class_barrier_wrapper_1ab99ca69ccd7d7919c0348c78a0ec7712" kindref="member">comm</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>label=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"></highlight></codeline>
-<codeline lineno="180" refid="class_barrier_wrapper_1acc66013759b9cc8e593725a1b8821359" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_barrier_wrapper_1acc66013759b9cc8e593725a1b8821359" kindref="member">BarrierWrapper</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper" kindref="compound">BarrierWrapper</ref>&amp;<sp/>inst);</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="183" refid="class_barrier_wrapper_1a83df985ee82ab6075540690db9dbd3bc" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_barrier_wrapper_1a83df985ee82ab6075540690db9dbd3bc" kindref="member">~BarrierWrapper</ref>();</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"></highlight></codeline>
-<codeline lineno="185" refid="class_barrier_wrapper_1a0af37b8ad635de7861f6639cf94af687" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a0af37b8ad635de7861f6639cf94af687" kindref="member">operator()</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>&amp;label,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>line)</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_barrier_wrapper_1a3fc02666f88ab13bbaf9eb0b8453caca" kindref="member">light</ref>)<sp/><ref refid="class_barrier_wrapper_1a77884c06ab7fd62675c3cfd6120c10d0" kindref="member">light_operator</ref>(label,<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/>line);</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_barrier_wrapper_1a502821e5fc06a438a54b8782a5dda179" kindref="member">heavy_operator</ref>(label,<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/>line);</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191" refid="class_barrier_wrapper_1a3719970a072571082333d6c7559fadf8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a3719970a072571082333d6c7559fadf8" kindref="member">on</ref>()<sp/><sp/>{<sp/><ref refid="class_barrier_wrapper_1aae1c8330ae2dd9755d090d53b98c6965" kindref="member">onoff</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;<sp/><sp/>}</highlight></codeline>
-<codeline lineno="192" refid="class_barrier_wrapper_1ac2bd182822af8aa50a2342e5b9d0b431" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1ac2bd182822af8aa50a2342e5b9d0b431" kindref="member">off</ref>()<sp/>{<sp/><ref refid="class_barrier_wrapper_1aae1c8330ae2dd9755d090d53b98c6965" kindref="member">onoff</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194" refid="class_barrier_wrapper_1a542ca840a4c45fcac98ddd79107667db" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a542ca840a4c45fcac98ddd79107667db" kindref="member">setLightWeight</ref>()<sp/>{<sp/><ref refid="class_barrier_wrapper_1a3fc02666f88ab13bbaf9eb0b8453caca" kindref="member">light</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;<sp/><sp/>}</highlight></codeline>
-<codeline lineno="195" refid="class_barrier_wrapper_1a5262ee0a294d53ee9f8d9bb650dfa79c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a5262ee0a294d53ee9f8d9bb650dfa79c" kindref="member">setHeavyWeight</ref>()<sp/>{<sp/><ref refid="class_barrier_wrapper_1a3fc02666f88ab13bbaf9eb0b8453caca" kindref="member">light</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197" refid="class_barrier_wrapper_1a15980e3d63719a3cc5ec31318fca85ba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper_1a15980e3d63719a3cc5ec31318fca85ba" kindref="member">getTime</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>double<sp/>ret<sp/>=<sp/>timer.getTime().getRealTime()*1.0e-6;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/><ref refid="class_barrier_wrapper_1a976b752d9985eeaca2aecff08d3e525e" kindref="member">timer</ref>.<ref refid="class_timer_1a490604efc23a4ff9bef8d1f9f418ecb2" kindref="member">getTime</ref>();</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_barrier_wrapper_1a976b752d9985eeaca2aecff08d3e525e" kindref="member">timer</ref>.<ref refid="class_timer_1a9020542d73357a4eef512eefaf57524b" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
-<codeline lineno="204" refid="class_barrier_wrapper_1a31717b8ca6f158fc839608b194450f4b" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;int&gt;<sp/><ref refid="class_barrier_wrapper_1a31717b8ca6f158fc839608b194450f4b" kindref="member">getMissing</ref>(<ref refid="_barrier_wrapper_8_h_1a593762cb19f616c1beb5486d07dbe458" kindref="member">BWPtr</ref><sp/>p);</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"></highlight></codeline>
-<codeline lineno="208"><highlight class="normal"></highlight></codeline>
-<codeline lineno="209"><highlight class="normal"></highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>_BarrierWrapper_H</highlight><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_basis_8_h.xml b/doxyxml/_basis_8_h.xml
deleted file mode 100644
index bdf5280..0000000
--- a/doxyxml/_basis_8_h.xml
+++ /dev/null
@@ -1,286 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_basis_8_h" kind="file" language="C++">
-    <compoundname>Basis.H</compoundname>
-    <includes refid="_pot_accel_8_h" local="no">PotAccel.H</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includedby refid="_axisymmetric_basis_8_h" local="no">/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H</includedby>
-    <includedby refid="_cyl_two_d_8_h" local="no">/home/weinberg/Projects/EXP/src/CylTwoD.H</includedby>
-    <includedby refid="_cylinder_8_h" local="no">/home/weinberg/Projects/EXP/src/Cylinder.H</includedby>
-    <incdepgraph>
-      <node id="11">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="12">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="4" relation="include">
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-        <label>/home/weinberg/Projects/EXP/src/Basis.H</label>
-        <link refid="_basis_8_h"/>
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-        <childnode refid="15" relation="include">
-        </childnode>
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-      <node id="2">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="3" relation="include">
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-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="10">
-        <label>Particle.H</label>
-      </node>
-      <node id="5">
-        <label>chrono</label>
-      </node>
-      <node id="14">
-        <label>config_exp.h</label>
-      </node>
-      <node id="3">
-        <label>cstdlib</label>
-      </node>
-      <node id="6">
-        <label>list</label>
-      </node>
-      <node id="7">
-        <label>map</label>
-      </node>
-      <node id="8">
-        <label>memory</label>
-      </node>
-      <node id="13">
-        <label>set</label>
-      </node>
-      <node id="4">
-        <label>string</label>
-      </node>
-      <node id="9">
-        <label>yaml-cpp/yaml.h</label>
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-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H</label>
-        <link refid="_axisymmetric_basis_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
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-        <link refid="_c_b_disk_8_h"/>
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-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="22">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
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-        <label>/home/weinberg/Projects/EXP/src/Direct.H</label>
-        <link refid="_direct_8_h"/>
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-        <label>/home/weinberg/Projects/EXP/src/FlatDisk.H</label>
-        <link refid="_flat_disk_8_h"/>
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-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
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-        <label>/home/weinberg/Projects/EXP/src/PeriodicBC.H</label>
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-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/src/Shells.H</label>
-        <link refid="_shells_8_h"/>
-      </node>
-      <node id="14">
-        <label>/home/weinberg/Projects/EXP/src/Sphere.H</label>
-        <link refid="_sphere_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>/home/weinberg/Projects/EXP/src/SphericalBasis.H</label>
-        <link refid="_spherical_basis_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>/home/weinberg/Projects/EXP/src/TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>/home/weinberg/Projects/EXP/src/user/UserBar.H</label>
-        <link refid="_user_bar_8_h"/>
-      </node>
-      <node id="16">
-        <label>/home/weinberg/Projects/EXP/src/user/UserDisk.H</label>
-        <link refid="_user_disk_8_h"/>
-      </node>
-      <node id="17">
-        <label>/home/weinberg/Projects/EXP/src/user/UserHalo.H</label>
-        <link refid="_user_halo_8_h"/>
-      </node>
-      <node id="18">
-        <label>/home/weinberg/Projects/EXP/src/user/UserLogPot.H</label>
-        <link refid="_user_log_pot_8_h"/>
-      </node>
-      <node id="19">
-        <label>/home/weinberg/Projects/EXP/src/user/UserMNdisk.H</label>
-        <link refid="_user_m_ndisk_8_h"/>
-      </node>
-      <node id="20">
-        <label>/home/weinberg/Projects/EXP/src/user/UserMW.H</label>
-        <link refid="_user_m_w_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_basis" prot="public">Basis</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Basis_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Basis_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_pot_accel_8_h" kindref="compound">PotAccel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8" refid="class_basis" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_basis" kindref="compound">Basis</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel" kindref="compound">PotAccel</ref></highlight></codeline>
-<codeline lineno="9"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_basis_1a3deeb360a898d1c144f7f6ad44813b3e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_basis_1a3deeb360a898d1c144f7f6ad44813b3e" kindref="member">Basis</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_basis_1abb4dbfbe9c234f44b1719a4d89dc3951" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_basis_1abb4dbfbe9c234f44b1719a4d89dc3951" kindref="member">determine_acceleration_and_potential</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_basis_1a8d4bece8ddfe81223177e63d76779284" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_basis_1a8d4bece8ddfe81223177e63d76779284" kindref="member">determine_fields_at_point</ref></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpoty,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_basis_1a34f7d4340bcd0c5452f430cebf5c3665" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_basis_1a34f7d4340bcd0c5452f430cebf5c3665" kindref="member">determine_fields_at_point_sph</ref></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>theta,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*dpotl0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpott,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_basis_1a3bcc5e3250f82d0ce476b096eabf342a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_basis_1a3bcc5e3250f82d0ce476b096eabf342a" kindref="member">determine_fields_at_point_cyl</ref></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*dpotl0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>@{</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_basis_1a80975218d67cc019d69fefb7a207d344" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_basis_1a80975218d67cc019d69fefb7a207d344" kindref="member">legendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::MatrixXd&amp;<sp/>p);</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_basis_1ad9a9f2f2d18335ae482b1d4e12490d0b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_basis_1ad9a9f2f2d18335ae482b1d4e12490d0b" kindref="member">dlegendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::MatrixXd<sp/>&amp;p,<sp/>Eigen::MatrixXd<sp/>&amp;dp);</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_basis_1a0779c0b0f74361d7861bbc19a194b63c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_basis_1a0779c0b0f74361d7861bbc19a194b63c" kindref="member">sinecosine_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/>Eigen::VectorXd&amp;<sp/>c,<sp/>Eigen::VectorXd&amp;<sp/>s);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>@}</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>_Basis_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/Basis.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_bess_8_h.xml b/doxyxml/_bess_8_h.xml
deleted file mode 100644
index 94d5de2..0000000
--- a/doxyxml/_bess_8_h.xml
+++ /dev/null
@@ -1,87 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_bess_8_h" kind="file" language="C++">
-    <compoundname>Bess.H</compoundname>
-    <includes local="no">cmath</includes>
-    <includes refid="_e_x_pmath_8_h" local="no">EXPmath.H</includes>
-    <incdepgraph>
-      <node id="3">
-        <label>EXPmath.H</label>
-        <link refid="_e_x_pmath_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H</label>
-        <link refid="_bess_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>cmath</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_bess" prot="public">Bess</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Bess_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Bess_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_e_x_pmath_8_h" kindref="compound">EXPmath.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9" refid="class_bess" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_bess" kindref="compound">Bess</ref></highlight></codeline>
-<codeline lineno="10"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13" refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>;</highlight></codeline>
-<codeline lineno="14" refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" kindref="member">order</ref>;</highlight></codeline>
-<codeline lineno="15" refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" kindref="member">roots</ref>,<sp/><ref refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/>std::tuple&lt;double,<sp/>double&gt;</highlight></codeline>
-<codeline lineno="18" refid="class_bess_1a70302bae78a8213f6e3203c5ac7b6638" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_bess_1a70302bae78a8213f6e3203c5ac7b6638" kindref="member">bracket</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>B,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z0);</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;</highlight></codeline>
-<codeline lineno="21" refid="class_bess_1a1691ef9edcfa233355a7b5573b1279fd" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_bess_1a1691ef9edcfa233355a7b5573b1279fd" kindref="member">zeros</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Nu,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Nz,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>tol=1.0e-18);</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_bess_1ab70b1c27a0b2c54152d2c5dc90bdf8be" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_bess_1ab70b1c27a0b2c54152d2c5dc90bdf8be" kindref="member">Bess</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" kindref="member">order</ref>,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>)<sp/>:<sp/><ref refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" kindref="member">order</ref>(<ref refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" kindref="member">order</ref>),<sp/><ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>(<ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>)</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" kindref="member">roots</ref><sp/>=<sp/><ref refid="class_bess_1a1691ef9edcfa233355a7b5573b1279fd" kindref="member">zeros</ref>(<ref refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" kindref="member">order</ref>,<sp/><ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>);</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" kindref="member">norm</ref>.resize(<ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>);</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m=0;<sp/>m&lt;<ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>;<sp/>m++)<sp/>{</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val<sp/>=<sp/>EXPmath::cyl_bessel_j(<ref refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" kindref="member">order</ref>+1.0,<sp/><ref refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" kindref="member">roots</ref>[m]);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" kindref="member">norm</ref>[m]<sp/>=<sp/>sqrt(0.5*val*val);</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="37" refid="class_bess_1a651fe3afc9d8d03ddb6ee22bfbbb14fb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_bess_1a651fe3afc9d8d03ddb6ee22bfbbb14fb" kindref="member">getNorm</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m)</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m&gt;=<ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" kindref="member">norm</ref>[m];</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="44" refid="class_bess_1a6cc73d37d8f69916acbfc9877fbb0c95" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_bess_1a6cc73d37d8f69916acbfc9877fbb0c95" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal">&amp;<sp/>m)</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m&gt;=<ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>EXPmath::cyl_bessel_j(<ref refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" kindref="member">order</ref>,<sp/>x*<ref refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" kindref="member">roots</ref>[m])<sp/>/<sp/><ref refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" kindref="member">norm</ref>[m];</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/>}<sp/></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_bess_1a1aa42e1cfb0cd11686abc440602da558" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_bess_1a1aa42e1cfb0cd11686abc440602da558" kindref="member">eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal">&amp;<sp/>m)</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m&gt;=<ref refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" kindref="member">nroots</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>EXPmath::cyl_bessel_j(<ref refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" kindref="member">order</ref>,<sp/>x*<ref refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" kindref="member">roots</ref>[m])<sp/>/<sp/><ref refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" kindref="member">norm</ref>[m];</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/>}<sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal">};<sp/></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_bessel_8_h.xml b/doxyxml/_bessel_8_h.xml
deleted file mode 100644
index 889613b..0000000
--- a/doxyxml/_bessel_8_h.xml
+++ /dev/null
@@ -1,293 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_bessel_8_h" kind="file" language="C++">
-    <compoundname>Bessel.H</compoundname>
-    <includes local="no">assert.h</includes>
-    <includes refid="_spherical_basis_8_h" local="no">SphericalBasis.H</includes>
-    <includedby refid="_two_center_8_h" local="no">/home/weinberg/Projects/EXP/src/TwoCenter.H</includedby>
-    <incdepgraph>
-      <node id="18">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="19">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="16" relation="include">
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-      <node id="9">
-        <label>AxisymmetricBasis.H</label>
-        <link refid="_axisymmetric_basis_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
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-        </childnode>
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-        <label>Basis.H</label>
-        <link refid="_basis_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
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-        <label>/home/weinberg/Projects/EXP/src/Bessel.H</label>
-        <link refid="_bessel_8_h"/>
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-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="23">
-        <label>NVTX.H</label>
-        <link refid="_n_v_t_x_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
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-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>SphericalBasis.H</label>
-        <link refid="_spherical_basis_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
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-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-      </node>
-      <node id="24">
-        <label>CoefContainer.H</label>
-      </node>
-      <node id="22">
-        <label>Coefficients.H</label>
-      </node>
-      <node id="21">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="17">
-        <label>Particle.H</label>
-      </node>
-      <node id="2">
-        <label>assert.h</label>
-      </node>
-      <node id="13">
-        <label>chrono</label>
-      </node>
-      <node id="20">
-        <label>config_exp.h</label>
-      </node>
-      <node id="12">
-        <label>cstdlib</label>
-      </node>
-      <node id="14">
-        <label>list</label>
-      </node>
-      <node id="15">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="5">
-        <label>random</label>
-      </node>
-      <node id="8">
-        <label>set</label>
-      </node>
-      <node id="7">
-        <label>string</label>
-      </node>
-      <node id="6">
-        <label>vector</label>
-      </node>
-      <node id="16">
-        <label>yaml-cpp/yaml.h</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/Bessel.H</label>
-        <link refid="_bessel_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
-      </node>
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-        <label>/home/weinberg/Projects/EXP/src/TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_bessel" prot="public">Bessel</innerclass>
-    <innerclass refid="class_bessel_1_1_r_grid" prot="private">Bessel::RGrid</innerclass>
-    <innerclass refid="class_bessel_1_1_roots" prot="private">Bessel::Roots</innerclass>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="_bessel_8_h_1a3d4bb7cde7a057d3575dc6bbd8c1bd96" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd sbessjz</definition>
-        <argsstring>(int n, int m)</argsstring>
-        <name>sbessjz</name>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
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-          <type>int</type>
-          <declname>m</declname>
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-        <referencedby refid="class_bessel_1_1_roots_1ae1df7578c906f6021a157ab0cc6c01ca" compoundref="_bessel_8_h" startline="65" endline="67">Bessel::Roots::Roots</referencedby>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Bessel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Bessel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;assert.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_spherical_basis_8_h" kindref="compound">SphericalBasis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="_bessel_8_h_1a3d4bb7cde7a057d3575dc6bbd8c1bd96" refkind="member"><highlight class="normal">Eigen::VectorXd<sp/><ref refid="_bessel_8_h_1a3d4bb7cde7a057d3575dc6bbd8c1bd96" kindref="member">sbessjz</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m);</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref>;</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="16"><highlight class="normal">{</highlight></codeline>
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-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="93" refid="class_bessel_1a75ccbb379912afb3dafd8239ea615ddd" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_bessel_1a75ccbb379912afb3dafd8239ea615ddd" kindref="member">Bessel</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>,<sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref>*<sp/>m=0);</highlight></codeline>
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-<codeline lineno="97"><highlight class="normal">};</highlight></codeline>
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-<codeline lineno="99"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>Bessel.H</highlight><highlight class="normal"></highlight></codeline>
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-    <location file="/home/weinberg/Projects/EXP/src/Bessel.H"/>
-  </compounddef>
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diff --git a/doxyxml/_biorth_cube_8_h.xml b/doxyxml/_biorth_cube_8_h.xml
deleted file mode 100644
index d7493b4..0000000
--- a/doxyxml/_biorth_cube_8_h.xml
+++ /dev/null
@@ -1,370 +0,0 @@
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-    <includes local="no">highfive/H5DataSpace.hpp</includes>
-    <includes local="no">highfive/H5Attribute.hpp</includes>
-    <includes refid="_emp_cyl2d_8_h" local="no">EmpCyl2d.H</includes>
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-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_emp_cyl2d_8_h" kindref="compound">EmpCyl2d.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="47"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="57"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="81" refid="class_biorth_cube_1a9112d07edabc3d5fe2fd9aed9907bf59" refkind="member"><highlight class="normal"><sp/><sp/>std::complex&lt;double&gt;<sp/><ref refid="class_biorth_cube_1a9112d07edabc3d5fe2fd9aed9907bf59" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cube_1a068cf3cab9677dae5e9017496e008c18" kindref="member">coefType</ref>&amp;<sp/>c,<sp/>Eigen::Vector3d<sp/>x);</highlight></codeline>
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-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
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diff --git a/doxyxml/_biorth_cyl_8_h.xml b/doxyxml/_biorth_cyl_8_h.xml
deleted file mode 100644
index 970669a..0000000
--- a/doxyxml/_biorth_cyl_8_h.xml
+++ /dev/null
@@ -1,512 +0,0 @@
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-  <compounddef id="_biorth_cyl_8_h" kind="file" language="C++">
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-    <includes local="no">yaml-cpp/yaml.h</includes>
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-    <includes local="no">highfive/H5Attribute.hpp</includes>
-    <includes refid="_emp_cyl2d_8_h" local="no">EmpCyl2d.H</includes>
-    <includedby refid="_flat_disk_8_h" local="no">/home/weinberg/Projects/EXP/src/FlatDisk.H</includedby>
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-        <childnode refid="11" relation="include">
-        </childnode>
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-        <label>EXPmath.H</label>
-        <link refid="_e_x_pmath_8_h"/>
-      </node>
-      <node id="31">
-        <label>EmpCyl2d.H</label>
-        <link refid="_emp_cyl2d_8_h"/>
-        <childnode refid="32" relation="include">
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-      </node>
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-      </node>
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-      </node>
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-      </node>
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-        </childnode>
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H</label>
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-    <innerclass refid="class_biorth_cyl" prot="public">BiorthCyl</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_BiorthCyl_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_BiorthCyl_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;mpi.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="localmpi_8_h" kindref="compound">localmpi.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>EXP<sp/>configuration</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;yaml-cpp/yaml.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaUtil.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaMappingConstants.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="comment">//<sp/>For<sp/>reading<sp/>and<sp/>writing<sp/>cache<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;highfive/H5File.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;highfive/H5DataSet.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;highfive/H5DataSpace.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;highfive/H5Attribute.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaParticle.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaMappingConstants.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_emp_cyl2d_8_h" kindref="compound">EmpCyl2d.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_biorth_cyl" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_biorth_cyl" kindref="compound">BiorthCyl</ref></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_biorth_cyl_1ac089d2198fd1f9f4654a79096a26e014" refkind="member"><highlight class="normal"><sp/><sp/>YAML::Node<sp/><ref refid="class_biorth_cyl_1ac089d2198fd1f9f4654a79096a26e014" kindref="member">conf</ref>,<sp/><ref refid="class_biorth_cyl_1ae6234b708479df10d2a9dea9dc715a06" kindref="member">diskconf</ref>;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_biorth_cyl_1a34a5f2e7e3ffdfab547074adad9186b2" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_biorth_cyl_1ace09e742a4c210919faa7d54262c3523" kindref="member">geometry</ref>,<sp/><ref refid="class_biorth_cyl_1a34a5f2e7e3ffdfab547074adad9186b2" kindref="member">biorth</ref>,<sp/><ref refid="class_biorth_cyl_1aa05151376b05d0d7c003cea8997cd0e5" kindref="member">forceID</ref>;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_biorth_cyl_1a803516fe8cf864d5f6764356becb6903" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a803516fe8cf864d5f6764356becb6903" kindref="member">EVEN_M</ref>,<sp/><ref refid="class_biorth_cyl_1a60173b649bc6160cf18c2ed0a0efff57" kindref="member">verbose</ref>,<sp/><ref refid="class_biorth_cyl_1a0083c5414adbd9a40a1e4ec7bc6ba563" kindref="member">logr</ref>,<sp/><ref refid="class_biorth_cyl_1a5ed05b6ea3093320def209812da77b09" kindref="member">use_mpi</ref>;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_biorth_cyl_1a45d513ecded05872b3aea7967d10468e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a45d513ecded05872b3aea7967d10468e" kindref="member">cmapR</ref>,<sp/><ref refid="class_biorth_cyl_1a8bcd18faef1104133ca2f8f6268ea9cb" kindref="member">cmapZ</ref>,<sp/><ref refid="class_biorth_cyl_1a1da134719f15848a5368828ed2a4010b" kindref="member">numx</ref>,<sp/><ref refid="class_biorth_cyl_1a76a3b8463759ffe95e421163180e3b9e" kindref="member">numy</ref>;</highlight></codeline>
-<codeline lineno="56" refid="class_biorth_cyl_1a5a2acdd3c357549301a4101c59070c4c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a912af2c7010998e5fec0b11044e45e82" kindref="member">xmin</ref>,<sp/><ref refid="class_biorth_cyl_1a4aef543dcc8ee6b716699f7746456069" kindref="member">xmax</ref>,<sp/><ref refid="class_biorth_cyl_1a5a2acdd3c357549301a4101c59070c4c" kindref="member">dx</ref>;</highlight></codeline>
-<codeline lineno="57" refid="class_biorth_cyl_1a5ab6aafa721770cc9ed2523bcdb34b42" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a1a45f0f5b63582372621b73186e8eff3" kindref="member">ymin</ref>,<sp/><ref refid="class_biorth_cyl_1a1d9f07ce70266f53815eb84a2da08f4c" kindref="member">ymax</ref>,<sp/><ref refid="class_biorth_cyl_1a5ab6aafa721770cc9ed2523bcdb34b42" kindref="member">dy</ref>;</highlight></codeline>
-<codeline lineno="59"></codeline>
-<codeline lineno="61" refid="class_biorth_cyl_1a96cebab63fae2af6c6b73339b3a2125c" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt;&gt;<sp/><ref refid="class_biorth_cyl_1a96cebab63fae2af6c6b73339b3a2125c" kindref="member">dens</ref>,<sp/><ref refid="class_biorth_cyl_1abcd2f61a7ee380d466f89dde743b6f4e" kindref="member">pot</ref>,<sp/><ref refid="class_biorth_cyl_1a521bfa398f57797094b186629274fa29" kindref="member">rforce</ref>,<sp/><ref refid="class_biorth_cyl_1ad8a3d9aa128eee24615c9d5013d96492" kindref="member">zforce</ref>;</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_biorth_cyl_1aee255671efcbbad94d8738e1f0975f2f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref><sp/><ref refid="class_biorth_cyl_1aee255671efcbbad94d8738e1f0975f2f" kindref="member">emp</ref>;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_biorth_cyl_1a4363205dc4df6d6db58c0a9267727509" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a4363205dc4df6d6db58c0a9267727509" kindref="member">initialize</ref>();</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_biorth_cyl_1a4eb129617431c65667af5d9fe8c4b8f4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a4eb129617431c65667af5d9fe8c4b8f4" kindref="member">create_tables</ref>();</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73" refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt;&gt;&amp;<sp/>mat,</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>anti_symmetric=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="class_biorth_cyl_1a36cd64ed68b2fcd3ada36d8ff0e55dd2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a36cd64ed68b2fcd3ada36d8ff0e55dd2" kindref="member">interp</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt;&gt;&amp;<sp/>mat,</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>ret,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>anti_symmetric=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_biorth_cyl_1a9dcd1db3ae3046403e2b50adeb566a4c" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_biorth_cyl_1a9dcd1db3ae3046403e2b50adeb566a4c" kindref="member">disktype</ref>;</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_biorth_cyl_1a44baa6ae5cdba330102cdb7c86ae5bec" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_biorth_cyl_1a44baa6ae5cdba330102cdb7c86ae5bec" kindref="member">cachename</ref>;</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_biorth_cyl_1abb4073ab54ea5c1a5ea4a36974b3bf73" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1abb4073ab54ea5c1a5ea4a36974b3bf73" kindref="member">WriteH5Params</ref>(HighFive::File&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="92" refid="class_biorth_cyl_1ac127da093fd81a35b0c694516f30d2bd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1ac127da093fd81a35b0c694516f30d2bd" kindref="member">WriteH5Arrays</ref>(HighFive::Group&amp;<sp/>arrays);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_biorth_cyl_1acfee7fb9b005d053e925ccc46ffa8448" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1acfee7fb9b005d053e925ccc46ffa8448" kindref="member">ReadH5Arrays</ref>(HighFive::Group&amp;<sp/>arrays);</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_biorth_cyl_1a7ab179f5c9b8fd26fce5f2ba0f480b4b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a7ab179f5c9b8fd26fce5f2ba0f480b4b" kindref="member">WriteH5Cache</ref>();</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101" refid="class_biorth_cyl_1a5b4b7246e7da3f662dd5ece7fa43af2a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a5b4b7246e7da3f662dd5ece7fa43af2a" kindref="member">ReadH5Cache</ref>();</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104" refid="class_biorth_cyl_1ab9d5345a5e5892fb0ca42cdb8a04a99f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_biorth_cyl_1ab9d5345a5e5892fb0ca42cdb8a04a99f" kindref="member">Version</ref>;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109" refid="class_biorth_cyl_1a6bfa6a72e35b4d0a6e4c59e7154ba2eb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a6bfa6a72e35b4d0a6e4c59e7154ba2eb" kindref="member">mpi</ref>;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="class_biorth_cyl_1a42c9ce41838d5591b234b84f579c8d8d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_biorth_cyl_1a42c9ce41838d5591b234b84f579c8d8d" kindref="member">BiorthCyl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_biorth_cyl_1ac089d2198fd1f9f4654a79096a26e014" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115" refid="class_biorth_cyl_1a733a6da0740ab880873d662e9343d9ba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a733a6da0740ab880873d662e9343d9ba" kindref="member">~BiorthCyl</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_biorth_cyl_1a645908abab2d6a3d7e0b961c927e05ab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>YAML::Node<sp/><ref refid="class_biorth_cyl_1a645908abab2d6a3d7e0b961c927e05ab" kindref="member">getHeader</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>cachefile);</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121" refid="class_biorth_cyl_1afd8ebd9624523fe9a61aaed0aba1f75a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1afd8ebd9624523fe9a61aaed0aba1f75a" kindref="member">r_to_xi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124" refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79" kindref="member">xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127" refid="class_biorth_cyl_1aac560786d75e49db349fcaa37dc91aed" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1aac560786d75e49db349fcaa37dc91aed" kindref="member">d_xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="130" refid="class_biorth_cyl_1a55aea348e6abf15adda65efbebb3576d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a55aea348e6abf15adda65efbebb3576d" kindref="member">z_to_yi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133" refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf" kindref="member">yi_to_z</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y);</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136" refid="class_biorth_cyl_1a42a4fe2ff63ca2b13f6ca0acd19aa18f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a42a4fe2ff63ca2b13f6ca0acd19aa18f" kindref="member">d_yi_to_z</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y);</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="139" refid="class_biorth_cyl_1a35e796e6e3a1e357cd8a12b7947a83c7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a35e796e6e3a1e357cd8a12b7947a83c7" kindref="member">get_pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(m,<sp/>n,<sp/><ref refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79" kindref="member">xi_to_r</ref>(x),<sp/><ref refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf" kindref="member">yi_to_z</ref>(y),<sp/><ref refid="class_biorth_cyl_1abcd2f61a7ee380d466f89dde743b6f4e" kindref="member">pot</ref>);<sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="143" refid="class_biorth_cyl_1ade8874da65d774f577b573cc4355df5d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1ade8874da65d774f577b573cc4355df5d" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(m,<sp/>n,<sp/><ref refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79" kindref="member">xi_to_r</ref>(x),<sp/><ref refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf" kindref="member">yi_to_z</ref>(y),<sp/><ref refid="class_biorth_cyl_1a96cebab63fae2af6c6b73339b3a2125c" kindref="member">dens</ref>);<sp/>}</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147" refid="class_biorth_cyl_1a86b7c35fcf9dc21aacd0ed66cad726e8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a86b7c35fcf9dc21aacd0ed66cad726e8" kindref="member">get_rforce</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(m,<sp/>n,<sp/><ref refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79" kindref="member">xi_to_r</ref>(x),<sp/><ref refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf" kindref="member">yi_to_z</ref>(y),<sp/><ref refid="class_biorth_cyl_1a521bfa398f57797094b186629274fa29" kindref="member">rforce</ref>);<sp/>}</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151" refid="class_biorth_cyl_1ac6a19141a850ae659ad4d71f3ab12729" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1ac6a19141a850ae659ad4d71f3ab12729" kindref="member">get_zforce</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(m,<sp/>n,<sp/><ref refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79" kindref="member">xi_to_r</ref>(x),<sp/><ref refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf" kindref="member">yi_to_z</ref>(y),<sp/><ref refid="class_biorth_cyl_1ad8a3d9aa128eee24615c9d5013d96492" kindref="member">zforce</ref>,<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">);<sp/>}</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"></highlight></codeline>
-<codeline lineno="155" refid="class_biorth_cyl_1a14dfcfba83b0a0265a750c1e68706f64" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a14dfcfba83b0a0265a750c1e68706f64" kindref="member">get_pot</ref>(Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(r,<sp/>z,<sp/><ref refid="class_biorth_cyl_1abcd2f61a7ee380d466f89dde743b6f4e" kindref="member">pot</ref>,<sp/>p);<sp/>}</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_biorth_cyl_1a8ad5380a103ef84f2aa8486058a3c54e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a8ad5380a103ef84f2aa8486058a3c54e" kindref="member">get_dens</ref>(Eigen::MatrixXd&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(r,<sp/>z,<sp/><ref refid="class_biorth_cyl_1a96cebab63fae2af6c6b73339b3a2125c" kindref="member">dens</ref>,<sp/>d);<sp/>}</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="163" refid="class_biorth_cyl_1a95144f6d7dead6f0447ffd33657e4f24" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a95144f6d7dead6f0447ffd33657e4f24" kindref="member">get_rforce</ref>(Eigen::MatrixXd&amp;<sp/>f,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(r,<sp/>z,<sp/><ref refid="class_biorth_cyl_1a521bfa398f57797094b186629274fa29" kindref="member">rforce</ref>,<sp/>f);<sp/>}</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167" refid="class_biorth_cyl_1afc9af366fb5380fafa0eb079bcad86ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1afc9af366fb5380fafa0eb079bcad86ac" kindref="member">get_zforce</ref>(Eigen::MatrixXd&amp;<sp/>f,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7" kindref="member">interp</ref>(r,<sp/>z,<sp/><ref refid="class_biorth_cyl_1ad8a3d9aa128eee24615c9d5013d96492" kindref="member">zforce</ref>,<sp/>f,<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">);<sp/>}</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"></highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::map&lt;std::string,<sp/>std::string&gt;</highlight></codeline>
-<codeline lineno="173" refid="class_biorth_cyl_1abcbbb2fb9d65cc063654f62d5e87b1dd" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_biorth_cyl_1abcbbb2fb9d65cc063654f62d5e87b1dd" kindref="member">cacheInfo</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>cachefile,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a60173b649bc6160cf18c2ed0a0efff57" kindref="member">verbose</ref>=</highlight><highlight class="keyword">true</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>(std::shared_ptr&lt;EmpCyl2d::ModelCyl&gt;<sp/>disk,</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;cudaArray_t&gt;&amp;<sp/>cuArray,</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thrust::host_vector&lt;cudaTextureObject_t&gt;&amp;<sp/>tex);</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/>cudaMappingConstants<sp/>ret;</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"></highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.rscale<sp/>=<sp/><ref refid="class_biorth_cyl_1ae0146a1a977323d814acf4c8e68dad2a" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.hscale<sp/>=<sp/><ref refid="class_biorth_cyl_1ae0146a1a977323d814acf4c8e68dad2a" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmin<sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a912af2c7010998e5fec0b11044e45e82" kindref="member">xmin</ref>;</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmax<sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a4aef543dcc8ee6b716699f7746456069" kindref="member">xmax</ref>;</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymin<sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a1a45f0f5b63582372621b73186e8eff3" kindref="member">ymin</ref>;</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymax<sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a1d9f07ce70266f53815eb84a2da08f4c" kindref="member">ymax</ref>;</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numr<sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a6f6719a3eafd7e38f0f681c5fc69e889" kindref="member">numr</ref>;</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numx<sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a1da134719f15848a5368828ed2a4010b" kindref="member">numx</ref>;</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numy<sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a76a3b8463759ffe95e421163180e3b9e" kindref="member">numy</ref>;</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dxi<sp/><sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a5a2acdd3c357549301a4101c59070c4c" kindref="member">dx</ref>;</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dyi<sp/><sp/><sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a5ab6aafa721770cc9ed2523bcdb34b42" kindref="member">dy</ref>;</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.cmapR<sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a45d513ecded05872b3aea7967d10468e" kindref="member">cmapR</ref>;</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.cmapZ<sp/><sp/>=<sp/><ref refid="class_biorth_cyl_1a8bcd18faef1104133ca2f8f6268ea9cb" kindref="member">cmapZ</ref>;</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"></highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
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-<codeline lineno="202"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="208" refid="class_biorth_cyl_1a19617628abb7c6644fc1520de479a0ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a19617628abb7c6644fc1520de479a0ac" kindref="member">getRtable</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a38f6710abd8ec718f28424f51c375bb1" kindref="member">rcylmax</ref>*<ref refid="class_biorth_cyl_1ae0146a1a977323d814acf4c8e68dad2a" kindref="member">scale</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211" refid="class_biorth_cyl_1af7eeb15104ff56e7e4e12b0cc3e794d2" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_biorth_cyl_1af7eeb15104ff56e7e4e12b0cc3e794d2" kindref="member">orthoCheck</ref>();</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight></codeline>
-<codeline lineno="214" refid="class_biorth_cyl_1a004f2f86e8d04f9892eaad6e61f0f743" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a004f2f86e8d04f9892eaad6e61f0f743" kindref="member">getXmin</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a912af2c7010998e5fec0b11044e45e82" kindref="member">xmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="215" refid="class_biorth_cyl_1ab7cfbcbf80ac26ac410adce91379e0cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1ab7cfbcbf80ac26ac410adce91379e0cf" kindref="member">getXmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a4aef543dcc8ee6b716699f7746456069" kindref="member">xmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="216" refid="class_biorth_cyl_1a402566b4b625aa2148a175394f6995de" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a402566b4b625aa2148a175394f6995de" kindref="member">getYmin</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a1a45f0f5b63582372621b73186e8eff3" kindref="member">ymin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="217" refid="class_biorth_cyl_1aa1dd16cc8bc87f32247b779f5a0eefe5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1aa1dd16cc8bc87f32247b779f5a0eefe5" kindref="member">getYmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a1d9f07ce70266f53815eb84a2da08f4c" kindref="member">ymax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220" refid="class_biorth_cyl_1a4677b5f1217c54bdbe7c313da6aebfab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1a4677b5f1217c54bdbe7c313da6aebfab" kindref="member">dump_basis</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"></highlight></codeline>
-<codeline lineno="223" refid="class_biorth_cyl_1abd8af7a03b4d60241e0a50e6de166c3e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_biorth_cyl_1abd8af7a03b4d60241e0a50e6de166c3e" kindref="member">getModelName</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1aee255671efcbbad94d8738e1f0975f2f" kindref="member">emp</ref>.<ref refid="class_emp_cyl2d_1ab6732d5c1869669061e583214a93bb2a" kindref="member">getModelName</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight></codeline>
-<codeline lineno="226" refid="class_biorth_cyl_1a401d15299b43648f8792b6743b8f1435" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_biorth_cyl_1a401d15299b43648f8792b6743b8f1435" kindref="member">getBiorthName</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_cyl_1aee255671efcbbad94d8738e1f0975f2f" kindref="member">emp</ref>.<ref refid="class_emp_cyl2d_1ac3e08ffeb77e92616a2cfa1cf748f3e2" kindref="member">getBiorthName</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="227"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"></highlight></codeline>
-<codeline lineno="229"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_c_b_disk_8_h.xml b/doxyxml/_c_b_disk_8_h.xml
deleted file mode 100644
index 5c67765..0000000
--- a/doxyxml/_c_b_disk_8_h.xml
+++ /dev/null
@@ -1,472 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_c_b_disk_8_h" kind="file" language="C++">
-    <compoundname>CBDisk.H</compoundname>
-    <includes local="no">memory</includes>
-    <includes local="no">map</includes>
-    <includes refid="_polar_basis_8_h" local="no">PolarBasis.H</includes>
-    <incdepgraph>
-      <node id="24">
-        <label>BiorthCyl.H</label>
-        <link refid="_biorth_cyl_8_h"/>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
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-      <node id="40">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="31" relation="include">
-        </childnode>
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-        <label>EXPmath.H</label>
-        <link refid="_e_x_pmath_8_h"/>
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-        <label>EmpCyl2d.H</label>
-        <link refid="_emp_cyl2d_8_h"/>
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-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
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-        <label>YamlCheck.H</label>
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-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
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-      <node id="32">
-        <label>interp.H</label>
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-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="28" relation="include">
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-        <childnode refid="7" relation="include">
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-      </node>
-      <node id="31">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
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-      <node id="35">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
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-        </childnode>
-        <childnode refid="2" relation="include">
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-        <label>Basis.H</label>
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-        </childnode>
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-        <label>/home/weinberg/Projects/EXP/src/CBDisk.H</label>
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-        <childnode refid="4" relation="include">
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-        <label>NVTX.H</label>
-        <link refid="_n_v_t_x_8_h"/>
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-        </childnode>
-        <childnode refid="19" relation="include">
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-        <link refid="_polar_basis_8_h"/>
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-      <node id="20">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="49">
-        <label>Eigen/Eigenvalues</label>
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-        <label>Particle.H</label>
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-        <label>algorithm</label>
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-      <node id="47">
-        <label>array</label>
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-        <label>chrono</label>
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-      <node id="27">
-        <label>cmath</label>
-      </node>
-      <node id="19">
-        <label>config_exp.h</label>
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-        <label>cstdlib</label>
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-      <node id="33">
-        <label>deque</label>
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-        <label>functional</label>
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-      <node id="44">
-        <label>highfive/H5Attribute.hpp</label>
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-      <node id="42">
-        <label>highfive/H5DataSet.hpp</label>
-      </node>
-      <node id="43">
-        <label>highfive/H5DataSpace.hpp</label>
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-      <node id="41">
-        <label>highfive/H5File.hpp</label>
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-        <label>highfive/eigen.hpp</label>
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-        <label>iostream</label>
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-        <label>list</label>
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-        <label>map</label>
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-        <label>yaml-cpp/yaml.h</label>
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-    </incdepgraph>
-    <innerclass refid="class_c_b_disk" prot="public">CBDisk</innerclass>
-    <briefdescription>
-    </briefdescription>
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-    </detaileddescription>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_CBDisk_H</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_c_b_disk" kindref="compound">CBDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis" kindref="compound">PolarBasis</ref><sp/></highlight></codeline>
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-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_c_b_disk_1ae0ed415245ad56ca9857fc9f8f663eac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1ae0ed415245ad56ca9857fc9f8f663eac" kindref="member">phif</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="29" refid="class_c_b_disk_1a1c28a9b686f7bce1eb228dbbcc80ee82" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a1c28a9b686f7bce1eb228dbbcc80ee82" kindref="member">dphi</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="32" refid="class_c_b_disk_1a0dc111984ae02c521feaaba4ac098d17" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a0dc111984ae02c521feaaba4ac098d17" kindref="member">dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="33" refid="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_c_b_disk_1a20a66684834ce4eb9ecf61e3d2eebf28" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a20a66684834ce4eb9ecf61e3d2eebf28" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m);</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_c_b_disk_1a29764ab0d1b593b26a434acc8b4ec22d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a29764ab0d1b593b26a434acc8b4ec22d" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>a);</highlight></codeline>
-<codeline lineno="38" refid="class_c_b_disk_1a8ec5eef80339b61d0cb1920b1ed2a953" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a8ec5eef80339b61d0cb1920b1ed2a953" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>a);</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="42" refid="class_c_b_disk_1ada5af15d64a58e2ad1125b21b518704e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1ada5af15d64a58e2ad1125b21b518704e" kindref="member">getRtable</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::numeric_limits&lt;double&gt;::max();<sp/>}</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_c_b_disk_1a484cfcfb7e36a4e40f6431f82f804b91" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a484cfcfb7e36a4e40f6431f82f804b91" kindref="member">orthoCheck</ref>();</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_c_b_disk_1a5ad6907893c4b46cf8a74737a70e02fa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a5ad6907893c4b46cf8a74737a70e02fa" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_c_b_disk_1a38663aa86ab5a642b78a2ab929584181" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a38663aa86ab5a642b78a2ab929584181" kindref="member">get_dpotl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>dpr,<sp/>Eigen::MatrixXd&amp;<sp/>dpz,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_c_b_disk_1a8ac1e7c2a2efee6990cc31ca6c53f9a1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a8ac1e7c2a2efee6990cc31ca6c53f9a1" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_c_b_disk_1ad6fae3c7216a87ed78b3136f84a086df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_c_b_disk_1ad6fae3c7216a87ed78b3136f84a086df" kindref="member">Disk2d</ref><sp/>=<sp/>std::shared_ptr&lt;EmpCyl2d::ModelCyl&gt;;</highlight></codeline>
-<codeline lineno="56" refid="class_c_b_disk_1a97020694d9624829ad91cf26a9c27c10" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_b_disk_1ad6fae3c7216a87ed78b3136f84a086df" kindref="member">Disk2d</ref><sp/><ref refid="class_c_b_disk_1a97020694d9624829ad91cf26a9c27c10" kindref="member">disk</ref>;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_c_b_disk_1a7f73fae41c4d8333c30d49d78814f40f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a7f73fae41c4d8333c30d49d78814f40f" kindref="member">setBackground</ref>();</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::tuple&lt;double,<sp/>double,<sp/>double&gt;</highlight></codeline>
-<codeline lineno="63" refid="class_c_b_disk_1a82d0b59e367b9d8f65feea21bcc2b921" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_b_disk_1a82d0b59e367b9d8f65feea21bcc2b921" kindref="member">background</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_c_b_disk_1a97020694d9624829ad91cf26a9c27c10" kindref="member">disk</ref>-&gt;pot(r),<sp/>-<ref refid="class_c_b_disk_1a97020694d9624829ad91cf26a9c27c10" kindref="member">disk</ref>-&gt;dpot(r),<sp/>0.0};<sp/>}</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="66" refid="class_c_b_disk_1aee6e15ba0b5c67150d23e0dc720fa2b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1aee6e15ba0b5c67150d23e0dc720fa2b3" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68" refid="class_c_b_disk_1a1dd056d9fc6501b320a84ad51bf58771" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a1dd056d9fc6501b320a84ad51bf58771" kindref="member">get_potl_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73" refid="class_c_b_disk_1aef83f6932f0df78fc6b0d0cb8451ce34" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1aef83f6932f0df78fc6b0d0cb8451ce34" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="74" refid="class_c_b_disk_1aa8389927c542546ee53c7bfd3574358e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_c_b_disk_1aa8389927c542546ee53c7bfd3574358e" kindref="member">mmax</ref>;</highlight></codeline>
-<codeline lineno="75" refid="class_c_b_disk_1a6f6130e732af6f8f04f037410e40c7be" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a6f6130e732af6f8f04f037410e40c7be" kindref="member">model</ref>;</highlight></codeline>
-<codeline lineno="77"></codeline>
-<codeline lineno="79" refid="class_c_b_disk_1aadcf6024f36d833aafb2e686721838e4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1aadcf6024f36d833aafb2e686721838e4" kindref="member">fac1</ref>,<sp/><ref refid="class_c_b_disk_1a167b975c504a681ad42b1d22bc6afdea" kindref="member">fac2</ref>;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_c_b_disk_1a57cf9d7bca64b85f40646eb0801ccfb8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_c_b_disk_1a57cf9d7bca64b85f40646eb0801ccfb8" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_c_b_disk_1a14ea57104484741b6934b807e1505e3d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a14ea57104484741b6934b807e1505e3d" kindref="member">get_pot</ref>(Eigen::MatrixXd&amp;<sp/>Vc,<sp/>Eigen::MatrixXd&amp;<sp/>Vs,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_c_b_disk_1a8ac1e7c2a2efee6990cc31ca6c53f9a1" kindref="member">get_potl</ref>(r,<sp/>z,<sp/>Vc,<sp/>0);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/>Vs<sp/>=<sp/>Vc;</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Global<sp/>parameters</highlight></codeline>
-<codeline lineno="100" refid="class_c_b_disk_1a993c3b530847f8253621c92ee6f8b68a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_b_disk_1a993c3b530847f8253621c92ee6f8b68a" kindref="member">CBDisk</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>,<sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref>*<sp/>m=0);</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103" refid="class_c_b_disk_1a6c8abbcc105ac8051b77977b10d541e6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a6c8abbcc105ac8051b77977b10d541e6" kindref="member">~CBDisk</ref>();</highlight></codeline>
-<codeline lineno="104"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/CBDisk.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_cauchy_p_v_8_h.xml b/doxyxml/_cauchy_p_v_8_h.xml
deleted file mode 100644
index 005afea..0000000
--- a/doxyxml/_cauchy_p_v_8_h.xml
+++ /dev/null
@@ -1,146 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_cauchy_p_v_8_h" kind="file" language="C++">
-    <compoundname>CauchyPV.H</compoundname>
-    <includes local="no">vector</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/CauchyPV.H</label>
-        <link refid="_cauchy_p_v_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="2">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_p_v_quad" prot="public">PVQuad</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_CauchyPV_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_CauchyPV_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="comment">//<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="comment">//<sp/>&lt;summary&gt;<sp/>Header<sp/>for<sp/>Cauchy<sp/>Principal<sp/>Value<sp/>integration<sp/>using<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Legendre<sp/>polynomials<sp/>&lt;/summary&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>Could<sp/>be<sp/>generalized<sp/>(easily)<sp/>for<sp/>other<sp/>sets<sp/>of<sp/>polies.<sp/><sp/>E.g.<sp/>will<sp/>do</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>Jacobi<sp/>polies<sp/>as<sp/>soon<sp/>as<sp/>references<sp/>are<sp/>obtained<sp/>from<sp/>Interlibrary<sp/>Loan</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>Cauchy<sp/>principal<sp/>value<sp/>integrals<sp/>computed<sp/>using<sp/>quadrature<sp/>rules</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>following<sp/>Paget<sp/>and<sp/>Elliott<sp/>(Numer.<sp/>Math.<sp/>19,<sp/>373).</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>Integral<sp/>performed<sp/>is:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>&lt;srcblock&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>/<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>I(L)<sp/>=<sp/>|<sp/>dx<sp/>f(x)<sp/>-------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>/<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>L<sp/>-<sp/>x</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>&lt;/srcblock&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>To<sp/>evaluate<sp/>integral:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>&lt;srcblock&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>b</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>/<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>I(M)<sp/>=<sp/>|<sp/>dy<sp/>g(y)<sp/>-------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>/<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>M<sp/>-<sp/>y</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>a</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>&lt;/srcblock&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>use<sp/>the<sp/>transformation:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>&lt;srcblock&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>2<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>+<sp/>a</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/>L<sp/>=<sp/>-----<sp/><sp/>M<sp/>-<sp/><sp/>-----</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>-<sp/>a<sp/><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>-<sp/>a</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>&lt;/srcblock&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>with</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>&lt;srcblock&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>-<sp/>a<sp/><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>+<sp/>a</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/>f(x)<sp/>=<sp/>g(<sp/>-----<sp/>x<sp/><sp/>+<sp/><sp/>-----<sp/>)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>2<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>2</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>&lt;/srcblock&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_p_v_quad" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_v_quad" kindref="compound">PVQuad</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_legendre" kindref="compound">Legendre</ref></highlight></codeline>
-<codeline lineno="66"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="68" refid="class_p_v_quad_1a400c2aefe2bc62751650cdff09bfb504" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a400c2aefe2bc62751650cdff09bfb504" kindref="member">n</ref>;</highlight></codeline>
-<codeline lineno="69" refid="class_p_v_quad_1af114416681890f0f2c321be098baa271" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_p_v_quad_1af114416681890f0f2c321be098baa271" kindref="member">eign</ref>;</highlight></codeline>
-<codeline lineno="70" refid="class_p_v_quad_1a00be18f0e8dc3dd60ff1a7aadba2d0ed" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_p_v_quad_1a00be18f0e8dc3dd60ff1a7aadba2d0ed" kindref="member">poly</ref>;</highlight></codeline>
-<codeline lineno="71" refid="class_p_v_quad_1a0f214a3824f021e94b5c642422e19a83" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_p_v_quad_1a0f214a3824f021e94b5c642422e19a83" kindref="member">chrs</ref>;</highlight></codeline>
-<codeline lineno="72" refid="class_p_v_quad_1a0134752fa8881a1291c1c347c404d64c" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_p_v_quad_1a0134752fa8881a1291c1c347c404d64c" kindref="member">nrml</ref>;</highlight></codeline>
-<codeline lineno="73" refid="class_p_v_quad_1a478eeb65b6bf358ccabec8faf411961f" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_p_v_quad_1a478eeb65b6bf358ccabec8faf411961f" kindref="member">coefs</ref>;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_p_v_quad_1a1a48edd350ed644195f5ea4015ef0ae7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a1a48edd350ed644195f5ea4015ef0ae7" kindref="member">get_eigenvalues</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="76" refid="class_p_v_quad_1a0c6a944809ea9310efbc2fbaf12ef44b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a0c6a944809ea9310efbc2fbaf12ef44b" kindref="member">get_orthopolies</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="77" refid="class_p_v_quad_1a5aee1fed7db1ce84ff5326c19967c579" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_p_v_quad_1a5aee1fed7db1ce84ff5326c19967c579" kindref="member">get_coefs</ref>(Eigen::VectorXd&amp;);</highlight></codeline>
-<codeline lineno="78" refid="class_p_v_quad_1a49787972b3582fa7a7381f5950f9e1de" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a49787972b3582fa7a7381f5950f9e1de" kindref="member">get_integral</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_p_v_quad_1a07735c01d10110c3f960cc6af278f44a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a07735c01d10110c3f960cc6af278f44a" kindref="member">q0</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>log(<sp/>(1.0+x)/(1.0-x)<sp/>);}</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Create<sp/>quadrature<sp/>with<sp/>N<sp/>knots</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85" refid="class_p_v_quad_1a095fad8784772473c98761a1bd89298e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_p_v_quad_1a095fad8784772473c98761a1bd89298e" kindref="member">PVQuad</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N=10);</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>After<sp/>constructtion,<sp/>use<sp/>root()<sp/>to<sp/>access<sp/>knots<sp/>and</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_p_v_quad_1a90aa4b304efe79aea1ed458287b9001d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a90aa4b304efe79aea1ed458287b9001d" kindref="member">root</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1af114416681890f0f2c321be098baa271" kindref="member">eign</ref>[i];}</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>use<sp/>mu()<sp/>get<sp/>access<sp/>weights</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_p_v_quad_1a29dbb3c795e8c0b6fb5b6afbe7ad46a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a29dbb3c795e8c0b6fb5b6afbe7ad46a4" kindref="member">mu</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a0f214a3824f021e94b5c642422e19a83" kindref="member">chrs</ref>[i];}</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Scalar<sp/>product<sp/>norm</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_p_v_quad_1a52945b58504890fed1b46c12e27c98c1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a52945b58504890fed1b46c12e27c98c1" kindref="member">norm</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a0134752fa8881a1291c1c347c404d64c" kindref="member">nrml</ref>[i];}</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Orthogonal<sp/>polynomial</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_p_v_quad_1a2ee47a539244ee355f3de8b4525b1b57" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_p_v_quad_1a2ee47a539244ee355f3de8b4525b1b57" kindref="member">ovec</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a00be18f0e8dc3dd60ff1a7aadba2d0ed" kindref="member">poly</ref>[i];}</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Coefficients<sp/>for<sp/>input<sp/>function</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_p_v_quad_1adb9383db1036ef0b2f5e2b0aebd98a13" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_p_v_quad_1adb9383db1036ef0b2f5e2b0aebd98a13" kindref="member">return_coefs</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>func);</highlight></codeline>
-<codeline lineno="99" refid="class_p_v_quad_1ab6b4fd9174ec2b9b37a35a68b56d446f" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_p_v_quad_1ab6b4fd9174ec2b9b37a35a68b56d446f" kindref="member">return_coefs</ref>(Eigen::VectorXd&amp;<sp/>input)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a5aee1fed7db1ce84ff5326c19967c579" kindref="member">get_coefs</ref>(input);}</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Cauchy<sp/>Principal<sp/>Value<sp/>integral</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>for<sp/>given<sp/>pole</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104" refid="class_p_v_quad_1a02a1cab021a3c1cfef43e0fa1c9ee991" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a02a1cab021a3c1cfef43e0fa1c9ee991" kindref="member">return_pv</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>lambda,<sp/>std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>func)<sp/>{</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_v_quad_1adb9383db1036ef0b2f5e2b0aebd98a13" kindref="member">return_coefs</ref>(func);<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a49787972b3582fa7a7381f5950f9e1de" kindref="member">get_integral</ref>(lambda);}</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="107" refid="class_p_v_quad_1a2b5bf27c335cd9300a5971e9eb1a11b4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a2b5bf27c335cd9300a5971e9eb1a11b4" kindref="member">return_pv</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>lambda,<sp/>Eigen::VectorXd&amp;<sp/>input)<sp/>{</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_v_quad_1adb9383db1036ef0b2f5e2b0aebd98a13" kindref="member">return_coefs</ref>(input);<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a49787972b3582fa7a7381f5950f9e1de" kindref="member">get_integral</ref>(lambda);}</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="class_p_v_quad_1abc9fd5c6951826a64b5b37e69dd90326" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1abc9fd5c6951826a64b5b37e69dd90326" kindref="member">return_pv</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>lambda)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_v_quad_1a49787972b3582fa7a7381f5950f9e1de" kindref="member">get_integral</ref>(lambda);}</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112"><highlight class="normal">};</highlight></codeline>
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-<codeline lineno="12" refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/><sp/><sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>;</highlight></codeline>
-<codeline lineno="13" refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/><sp/><sp/><ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>;</highlight></codeline>
-<codeline lineno="14" refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/><sp/><sp/><ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_ring_iterator_1ac49a5e2521cbc023a3da64469b695381" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_ring_iterator_1ac49a5e2521cbc023a3da64469b695381" kindref="member">iterator_category</ref><sp/>=<sp/>std::bidirectional_iterator_tag;</highlight></codeline>
-<codeline lineno="20" refid="class_ring_iterator_1a93c857cfb2880488146cd6cb9a500813" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_ring_iterator_1a93c857cfb2880488146cd6cb9a500813" kindref="member">value_type</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>T;</highlight></codeline>
-<codeline lineno="21" refid="class_ring_iterator_1aa56768696f64d6226c4c04c8631bca67" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_ring_iterator_1aa56768696f64d6226c4c04c8631bca67" kindref="member">difference_type</ref><sp/><sp/><sp/>=<sp/>std::ptrdiff_t;</highlight></codeline>
-<codeline lineno="22" refid="class_ring_iterator_1ad378b21b5c3dcf41c9aaefd857d5327c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_ring_iterator_1ad378b21b5c3dcf41c9aaefd857d5327c" kindref="member">pointer</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>T*;</highlight></codeline>
-<codeline lineno="23" refid="class_ring_iterator_1a4c8c168322f82bda3bef534515d2e15b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_ring_iterator_1a4c8c168322f82bda3bef534515d2e15b" kindref="member">reference</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>T&amp;;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="29" refid="class_ring_iterator_1a8221f1f69f05955630d4168f0dae47fa" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator_1a8221f1f69f05955630d4168f0dae47fa" kindref="member">RingIterator</ref><sp/>(Container&amp;<sp/>v)<sp/>:</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ring_iterator_1adf02a88bf9d690e0966556ebff6ea3eb" kindref="member">data</ref>(v),<sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>(v.<ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>()),<sp/><ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>(v.<ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>()),<sp/><ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>(v.<ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>())<sp/>{}</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="33" refid="class_ring_iterator_1acc7c90da362983763e792a910e6e45d5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator_1acc7c90da362983763e792a910e6e45d5" kindref="member">RingIterator</ref><sp/>(Container&amp;<sp/>v,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref>&amp;<sp/>i)<sp/>:</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ring_iterator_1adf02a88bf9d690e0966556ebff6ea3eb" kindref="member">data</ref>(v),<sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>(i),<sp/><ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>(v.<ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>()),<sp/><ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>(v.<ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>())<sp/>{}</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_ring_iterator_1a8712aceaf5984862579f0a23c7b253bc" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator_1a8712aceaf5984862579f0a23c7b253bc" kindref="member">RingIterator</ref><sp/>(Container&amp;<sp/>v,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref>&amp;<sp/>i,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref>&amp;<sp/>j)<sp/>:</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ring_iterator_1adf02a88bf9d690e0966556ebff6ea3eb" kindref="member">data</ref>(v),<sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>(i),<sp/><ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>(i),<sp/><ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>(j)<sp/>{}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_ring_iterator_1ad537892d5b5d58ba26e0aca4d7ceb608" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator_1ad537892d5b5d58ba26e0aca4d7ceb608" kindref="member">RingIterator</ref><sp/>(Container&amp;<sp/>v,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>i)<sp/>:</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ring_iterator_1adf02a88bf9d690e0966556ebff6ea3eb" kindref="member">data</ref>(v),<sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>(v.<ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>()<sp/>+<sp/>i<sp/>%<sp/>v.size()),<sp/><ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>(v.<ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>()),<sp/><ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>(v.<ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>())<sp/>{}</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_ring_iterator_1a0ac243d97d7568233aa27f1b065de960" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_ring_iterator_1a0ac243d97d7568233aa27f1b065de960" kindref="member">operator == </ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref>&amp;<sp/>x)</highlight><highlight class="keyword"><sp/>const<sp/></highlight></codeline>
-<codeline lineno="46"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref><sp/>==<sp/>x.<ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>;<sp/></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="51" refid="class_ring_iterator_1a27a92b4feb984bcf9cdc6ad170d99448" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_ring_iterator_1a27a92b4feb984bcf9cdc6ad170d99448" kindref="member">operator != </ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref>&amp;<sp/>x)</highlight><highlight class="keyword"><sp/>const<sp/></highlight></codeline>
-<codeline lineno="52"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>!<sp/>(*</highlight><highlight class="keyword">this</highlight><highlight class="normal"><sp/>==<sp/>x);<sp/></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="57" refid="class_ring_iterator_1a1c0937fc0eba4a174a83f426d4d45339" refkind="member"><highlight class="normal"><sp/><sp/>T<sp/><ref refid="class_ring_iterator_1a1c0937fc0eba4a174a83f426d4d45339" kindref="member">operator*</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight></codeline>
-<codeline lineno="58"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*<ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>;<sp/></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="63" refid="class_ring_iterator_1a9452810131d236d9fd5be1aaa1542871" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/><ref refid="class_ring_iterator_1a9452810131d236d9fd5be1aaa1542871" kindref="member">operator-&gt;</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight></codeline>
-<codeline lineno="64"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>;<sp/></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="69" refid="class_ring_iterator_1a6f8f6f1863544e91fc6f9e99cbf0e5e1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref>&amp;<sp/><ref refid="class_ring_iterator_1a6f8f6f1863544e91fc6f9e99cbf0e5e1" kindref="member">operator++</ref>()<sp/></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/>++<ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>;</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref><sp/>==<sp/><ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>)<sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref><sp/>=<sp/><ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="77" refid="class_ring_iterator_1ae3deef3e4d5bdd5a69c70338f4084744" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref><sp/><ref refid="class_ring_iterator_1ae3deef3e4d5bdd5a69c70338f4084744" kindref="member">operator++</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref><sp/>ring<sp/>=<sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/>++*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ring;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85" refid="class_ring_iterator_1ac42ba90c6e63d42524fd0486258ee68e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref>&amp;<sp/><ref refid="class_ring_iterator_1ac42ba90c6e63d42524fd0486258ee68e" kindref="member">operator--</ref>()<sp/></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref><sp/>==<sp/><ref refid="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" kindref="member">begin</ref>)<sp/><ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref><sp/>=<sp/><ref refid="class_ring_iterator_1ae298e97dc73d45278bfdeceabf23c8db" kindref="member">end</ref>;</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/>--<ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_ring_iterator_1a539146f25b901da7cd60879593a6e298" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref><sp/><ref refid="class_ring_iterator_1a539146f25b901da7cd60879593a6e298" kindref="member">operator--</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref><sp/>ring<sp/>=<sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/>--*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;<sp/></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ring;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101" refid="class_ring_iterator_1a8accd267e289db7968db2d050987df4b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref><sp/><ref refid="class_ring_iterator_1a8accd267e289db7968db2d050987df4b" kindref="member">insert</ref><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T&amp;<sp/>x)</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref><sp/>(<ref refid="class_ring_iterator_1adf02a88bf9d690e0966556ebff6ea3eb" kindref="member">data</ref>,<sp/><ref refid="class_ring_iterator_1adf02a88bf9d690e0966556ebff6ea3eb" kindref="member">data</ref>.insert<sp/>(<ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>,<sp/>x));</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107" refid="class_ring_iterator_1a86fb027f699663c7fc14759010fecfea" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref><sp/><ref refid="class_ring_iterator_1a86fb027f699663c7fc14759010fecfea" kindref="member">erase</ref>()<sp/></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_ring_iterator" kindref="compound">RingIterator</ref><sp/>(<ref refid="class_ring_iterator_1adf02a88bf9d690e0966556ebff6ea3eb" kindref="member">data</ref>,<sp/><ref refid="class_ring_iterator_1adf02a88bf9d690e0966556ebff6ea3eb" kindref="member">data</ref>.erase<sp/>(<ref refid="class_ring_iterator_1a5540dbc176b644a8d2249a875e943f3d" kindref="member">cursor</ref>));</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="111"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>Iterator&gt;</highlight></codeline>
-<codeline lineno="114" refid="class_cyclic_iterator" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cyclic_iterator" kindref="compound">CyclicIterator</ref></highlight></codeline>
-<codeline lineno="115"><highlight class="normal">{</highlight></codeline>
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diff --git a/doxyxml/_coefs_8_h.xml b/doxyxml/_coefs_8_h.xml
deleted file mode 100644
index 7d376cd..0000000
--- a/doxyxml/_coefs_8_h.xml
+++ /dev/null
@@ -1,113 +0,0 @@
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-    <includes local="no">memory</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes local="no">yaml-cpp/yaml.h</includes>
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-    <innerclass refid="struct_cyl_coefs" prot="public">CylCoefs</innerclass>
-    <innerclass refid="struct_sph_coefs" prot="public">SphCoefs</innerclass>
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-        <definition>typedef std::shared_ptr&lt;SphCoefs&gt; SphCoefsPtr</definition>
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-        <name>SphCoefsPtr</name>
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-<codeline lineno="21" refid="_coefs_8_h_1a86347812a271b6cfe7ddecb149de17da" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;CylCoefs&gt;<sp/><ref refid="_coefs_8_h_1a86347812a271b6cfe7ddecb149de17da" kindref="member">CylCoefsPtr</ref>;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="struct_sph_coefs" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_sph_coefs" kindref="compound">SphCoefs</ref></highlight></codeline>
-<codeline lineno="24"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="25" refid="struct_sph_coefs_1a1af2fa2af96e30dae8746f9a348560c1" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;char[]&gt;<sp/><ref refid="struct_sph_coefs_1a1af2fa2af96e30dae8746f9a348560c1" kindref="member">buf</ref>;</highlight></codeline>
-<codeline lineno="26" refid="struct_sph_coefs_1acd556af43e937c6ca856a2adbd556249" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_sph_coef_header" kindref="compound">SphCoefHeader</ref><sp/><ref refid="struct_sph_coefs_1acd556af43e937c6ca856a2adbd556249" kindref="member">header</ref>;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/>Eigen::Matrix&lt;double,<sp/>Eigen::Dynamic,<sp/>Eigen::Dynamic,<sp/>Eigen::ColMajor&gt;</highlight></codeline>
-<codeline lineno="30" refid="struct_sph_coefs_1ad858843b8462b41cb636e3c5ef58f298" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_sph_coefs_1ad858843b8462b41cb636e3c5ef58f298" kindref="member">EigenColMajor</ref>;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="struct_sph_coefs_1a1f5bee5dd88b4f1d60c41af4a2748d84" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_sph_coefs_1ad858843b8462b41cb636e3c5ef58f298" kindref="member">EigenColMajor</ref><sp/><ref refid="struct_sph_coefs_1a1f5bee5dd88b4f1d60c41af4a2748d84" kindref="member">coefs</ref>;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="struct_sph_coefs_1ae810f4d1e433e00b98a4e6a2745615ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="struct_sph_coefs_1ae810f4d1e433e00b98a4e6a2745615ee" kindref="member">read</ref>(std::istream&amp;<sp/>in,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>exp_type);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="_coefs_8_h_1ae012d33ebd61a8a4a6b8637a17c7ccf8" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;SphCoefs&gt;<sp/><ref refid="_coefs_8_h_1ae012d33ebd61a8a4a6b8637a17c7ccf8" kindref="member">SphCoefsPtr</ref>;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/Coefs.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_color_gradient_8_h.xml b/doxyxml/_color_gradient_8_h.xml
deleted file mode 100644
index b32b4c5..0000000
--- a/doxyxml/_color_gradient_8_h.xml
+++ /dev/null
@@ -1,127 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_color_gradient_8_h" kind="file" language="C++">
-    <compoundname>ColorGradient.H</compoundname>
-    <includes local="no">png++/png.hpp</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/ColorGradient.H</label>
-        <link refid="_color_gradient_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>png++/png.hpp</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_color_gradient" prot="public">ColorGradient</innerclass>
-    <innerclass refid="struct_color_gradient_1_1_color_point" prot="private">ColorGradient::ColorPoint</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_ColorGradient_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_ColorGradient_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;png++/png.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="class_color_gradient" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_color_gradient" kindref="compound">ColorGradient</ref></highlight></codeline>
-<codeline lineno="8"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="10" refid="struct_color_gradient_1_1_color_point" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="13" refid="struct_color_gradient_1_1_color_point_1accc64344c40b5e53db0f0db6a5e1711d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="struct_color_gradient_1_1_color_point_1a49bba60a0dab6e93c7d1487a2c34d96d" kindref="member">r</ref>,<sp/><ref refid="struct_color_gradient_1_1_color_point_1ae319ced624675dc844843947bf76a2e0" kindref="member">g</ref>,<sp/><ref refid="struct_color_gradient_1_1_color_point_1accc64344c40b5e53db0f0db6a5e1711d" kindref="member">b</ref>;</highlight></codeline>
-<codeline lineno="15" refid="struct_color_gradient_1_1_color_point_1a0e4cf76fee334f31c96182f12c44cf09" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="struct_color_gradient_1_1_color_point_1a0e4cf76fee334f31c96182f12c44cf09" kindref="member">val</ref>;</highlight></codeline>
-<codeline lineno="16" refid="struct_color_gradient_1_1_color_point_1ad6a0b9d0b0320903b4b9f50cff976321" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="struct_color_gradient_1_1_color_point_1ad6a0b9d0b0320903b4b9f50cff976321" kindref="member">ColorPoint</ref>(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>red,<sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>green,<sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>blue,<sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>value)</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/><ref refid="struct_color_gradient_1_1_color_point_1a49bba60a0dab6e93c7d1487a2c34d96d" kindref="member">r</ref>(red),<sp/><ref refid="struct_color_gradient_1_1_color_point_1ae319ced624675dc844843947bf76a2e0" kindref="member">g</ref>(green),<sp/><ref refid="struct_color_gradient_1_1_color_point_1accc64344c40b5e53db0f0db6a5e1711d" kindref="member">b</ref>(blue),<sp/><ref refid="struct_color_gradient_1_1_color_point_1a0e4cf76fee334f31c96182f12c44cf09" kindref="member">val</ref>(value)<sp/>{}</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;ColorPoint&gt;<sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="25" refid="class_color_gradient_1a4acdb3ea165dfe1e1be1644e16622934" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_color_gradient_1a4acdb3ea165dfe1e1be1644e16622934" kindref="member">ColorGradient</ref>()<sp/><sp/>{<sp/><sp/><ref refid="class_color_gradient_1a4b1b3a7d16ad611f5cca323a2f37ddce" kindref="member">createDefaultGradient</ref>();<sp/><sp/>}</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="28" refid="class_color_gradient_1a611f25f238e0781f27d2821971f4ac27" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_color_gradient_1a611f25f238e0781f27d2821971f4ac27" kindref="member">addColorPoint</ref>(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>red,<sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>green,<sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>blue,<sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>value)</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;<ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.size();<sp/>i++)<sp/><sp/>{</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(value<sp/>&lt;<sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>[i].val)<sp/>{</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.insert(<ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.begin()+i,<sp/><ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(red,green,blue,<sp/>value));</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;<sp/><sp/>}}</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(red,green,blue,<sp/>value));</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="38" refid="class_color_gradient_1aeaa1447003e70159ab0bcd4197f80aa4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_color_gradient_1aeaa1447003e70159ab0bcd4197f80aa4" kindref="member">clearGradient</ref>()<sp/>{<sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.clear();<sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="41" refid="class_color_gradient_1a4b1b3a7d16ad611f5cca323a2f37ddce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_color_gradient_1a4b1b3a7d16ad611f5cca323a2f37ddce" kindref="member">createDefaultGradient</ref>()</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a55a6a3c5156681a13d03e5a8d73fe8e1" kindref="member">createGrayGradient</ref>();</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="47" refid="class_color_gradient_1a55a6a3c5156681a13d03e5a8d73fe8e1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_color_gradient_1a55a6a3c5156681a13d03e5a8d73fe8e1" kindref="member">createGrayGradient</ref>()</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.clear();</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(0,<sp/>0,<sp/>0,<sp/><sp/><sp/>0.0000f));<sp/></highlight><highlight class="comment">//<sp/>Black.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(1,<sp/>1,<sp/>1,<sp/><sp/><sp/>1.0000f));<sp/></highlight><highlight class="comment">//<sp/>White.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_color_gradient_1a2dc5d51e25fcdc13d2e3a6077a603ef2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_color_gradient_1a2dc5d51e25fcdc13d2e3a6077a603ef2" kindref="member">createSevenColorHeatMapGradient</ref>()</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.clear();</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(0,<sp/>0,<sp/>0,<sp/><sp/><sp/>0.0000f));<sp/></highlight><highlight class="comment">//<sp/>Black.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(0,<sp/>0,<sp/>1,<sp/><sp/><sp/>0.1667f));<sp/></highlight><highlight class="comment">//<sp/>Blue.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(0,<sp/>1,<sp/>1,<sp/><sp/><sp/>0.3333f));<sp/></highlight><highlight class="comment">//<sp/>Cyan.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(0,<sp/>1,<sp/>0,<sp/><sp/><sp/>0.5000f));<sp/></highlight><highlight class="comment">//<sp/>Green.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(1,<sp/>1,<sp/>0,<sp/><sp/><sp/>0.6667f));<sp/></highlight><highlight class="comment">//<sp/>Yellow.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(1,<sp/>0,<sp/>0,<sp/><sp/><sp/>0.8333f));<sp/></highlight><highlight class="comment">//<sp/>Red.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(1,<sp/>1,<sp/>1,<sp/><sp/><sp/>1.0000f));<sp/></highlight><highlight class="comment">//<sp/>White.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68" refid="class_color_gradient_1a4ad064ae84546225ac4ddcde3af23844" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_color_gradient_1a4ad064ae84546225ac4ddcde3af23844" kindref="member">createFiveColorHeatMapGradient</ref>()</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.clear();</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(0,<sp/>0,<sp/>1,<sp/><sp/><sp/>0.0f));<sp/><sp/></highlight><highlight class="comment">//<sp/>Blue.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(0,<sp/>1,<sp/>1,<sp/><sp/><sp/>0.25f));<sp/></highlight><highlight class="comment">//<sp/>Cyan.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(0,<sp/>1,<sp/>0,<sp/><sp/><sp/>0.5f));<sp/><sp/></highlight><highlight class="comment">//<sp/>Green.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(1,<sp/>1,<sp/>0,<sp/><sp/><sp/>0.75f));<sp/></highlight><highlight class="comment">//<sp/>Yellow.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.push_back(<ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref>(1,<sp/>0,<sp/>0,<sp/><sp/><sp/>1.0f));<sp/><sp/></highlight><highlight class="comment">//<sp/>Red.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/></highlight></codeline>
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-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.size()==0)</highlight></codeline>
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-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/>red,<sp/>green,<sp/>blue;</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;<ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.size();<sp/>i++)<sp/>{</highlight></codeline>
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-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref><sp/>&amp;currC<sp/>=<sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>[i];</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(value<sp/>&lt;<sp/>currC.<ref refid="struct_color_gradient_1_1_color_point_1a0e4cf76fee334f31c96182f12c44cf09" kindref="member">val</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="struct_color_gradient_1_1_color_point" kindref="compound">ColorPoint</ref><sp/>&amp;prevC<sp/><sp/>=<sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>[<sp/>std::max&lt;int&gt;(0,i-1)<sp/>];</highlight></codeline>
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-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>red<sp/><sp/><sp/>=<sp/>(prevC.<ref refid="struct_color_gradient_1_1_color_point_1a49bba60a0dab6e93c7d1487a2c34d96d" kindref="member">r</ref><sp/>-<sp/>currC.<ref refid="struct_color_gradient_1_1_color_point_1a49bba60a0dab6e93c7d1487a2c34d96d" kindref="member">r</ref>)*fractBetween<sp/>+<sp/>currC.<ref refid="struct_color_gradient_1_1_color_point_1a49bba60a0dab6e93c7d1487a2c34d96d" kindref="member">r</ref>;</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>green<sp/>=<sp/>(prevC.<ref refid="struct_color_gradient_1_1_color_point_1ae319ced624675dc844843947bf76a2e0" kindref="member">g</ref><sp/>-<sp/>currC.<ref refid="struct_color_gradient_1_1_color_point_1ae319ced624675dc844843947bf76a2e0" kindref="member">g</ref>)*fractBetween<sp/>+<sp/>currC.<ref refid="struct_color_gradient_1_1_color_point_1ae319ced624675dc844843947bf76a2e0" kindref="member">g</ref>;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>blue<sp/><sp/>=<sp/>(prevC.<ref refid="struct_color_gradient_1_1_color_point_1accc64344c40b5e53db0f0db6a5e1711d" kindref="member">b</ref><sp/>-<sp/>currC.<ref refid="struct_color_gradient_1_1_color_point_1accc64344c40b5e53db0f0db6a5e1711d" kindref="member">b</ref>)*fractBetween<sp/>+<sp/>currC.<ref refid="struct_color_gradient_1_1_color_point_1accc64344c40b5e53db0f0db6a5e1711d" kindref="member">b</ref>;</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>png::rgb_pixel(floor(red<sp/><sp/>*255.99),</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>floor(green*255.99),</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>floor(blue<sp/>*255.99));</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/>red<sp/><sp/><sp/>=<sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.back().r;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/>green<sp/>=<sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.back().g;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/>blue<sp/><sp/>=<sp/><ref refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" kindref="member">color</ref>.back().b;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>png::rgb_pixel(floor(red<sp/><sp/>*255.99),</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>floor(green*255.99),</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>floor(blue<sp/>*255.99));</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="111"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_component_8_h.xml b/doxyxml/_component_8_h.xml
deleted file mode 100644
index 53e91f6..0000000
--- a/doxyxml/_component_8_h.xml
+++ /dev/null
@@ -1,1298 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_component_8_h" kind="file" language="C++">
-    <compoundname>Component.H</compoundname>
-    <includes local="no">mpi.h</includes>
-    <includes local="no">utility</includes>
-    <includes local="no">yaml-cpp/yaml.h</includes>
-    <includes refid="_e_x_p_exception_8_h" local="no">EXPException.H</includes>
-    <includes refid="global_8_h" local="no">global.H</includes>
-    <includes refid="_orient_8_h" local="no">Orient.H</includes>
-    <includes refid="header_8_h" local="no">header.H</includes>
-    <includes refid="localmpi_8_h" local="no">localmpi.H</includes>
-    <includes refid="_particle_ferry_8_h" local="no">ParticleFerry.H</includes>
-    <includes refid="_center_file_8_h" local="no">CenterFile.H</includes>
-    <includes refid="_pot_accel_8_h" local="no">PotAccel.H</includes>
-    <includes refid="_circular_8_h" local="no">Circular.H</includes>
-    <includes refid="_timer_8_h" local="no">Timer.H</includes>
-    <includes local="no">config_exp.h</includes>
-    <includedby refid="_component_container_8_h" local="no">/home/weinberg/Projects/EXP/src/ComponentContainer.H</includedby>
-    <includedby refid="_external_force_8_h" local="no">/home/weinberg/Projects/EXP/src/ExternalForce.H</includedby>
-    <includedby refid="_out_ascii_8_h" local="no">/home/weinberg/Projects/EXP/src/OutAscii.H</includedby>
-    <includedby refid="_out_calbr_8_h" local="no">/home/weinberg/Projects/EXP/src/OutCalbr.H</includedby>
-    <includedby refid="_out_frac_8_h" local="no">/home/weinberg/Projects/EXP/src/OutFrac.H</includedby>
-    <includedby refid="_out_vel_8_h" local="no">/home/weinberg/Projects/EXP/src/OutVel.H</includedby>
-    <incdepgraph>
-      <node id="23">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="43">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="47">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="36">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-      </node>
-      <node id="38">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-      </node>
-      <node id="29">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="45">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="25">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-      </node>
-      <node id="46">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="33">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-      </node>
-      <node id="41">
-        <label>header.H</label>
-        <link refid="header_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
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-      </node>
-      <node id="10">
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-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="28">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
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-      </node>
-      <node id="30">
-        <label>Orient.H</label>
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-        <childnode refid="40" relation="include">
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-      <node id="42">
-        <label>ParticleFerry.H</label>
-        <link refid="_particle_ferry_8_h"/>
-        <childnode refid="7" relation="include">
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-        <childnode refid="14" relation="include">
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-        <childnode refid="35" relation="include">
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-      <node id="44">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
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-        </childnode>
-        <childnode refid="8" relation="include">
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-      <node id="16">
-        <label>coef.H</label>
-        <link refid="src_2coef_8_h"/>
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-      <node id="12">
-        <label>global.H</label>
-        <link refid="global_8_h"/>
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-      </node>
-      <node id="34">
-        <label>Eigen/Eigen</label>
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-      <node id="35">
-        <label>Particle.H</label>
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-        <label>algorithm</label>
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-      <node id="37">
-        <label>array</label>
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-        <label>chrono</label>
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-        <label>cmath</label>
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-      <node id="26">
-        <label>cstdlib</label>
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-      <node id="31">
-        <label>deque</label>
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-      <node id="21">
-        <label>fstream</label>
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-        <label>iomanip</label>
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-      <node id="20">
-        <label>iostream</label>
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-      <node id="15">
-        <label>list</label>
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-      <node id="24">
-        <label>map</label>
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-      <node id="14">
-        <label>memory</label>
-      </node>
-      <node id="2">
-        <label>mpi.h</label>
-      </node>
-      <node id="13">
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-    </briefdescription>
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-    </detaileddescription>
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-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="181"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="185" refid="class_component_1a5ebc7c7b2025ca9c5d5acc5fb7ac6573" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_component_container" kindref="compound">ComponentContainer</ref>;</highlight></codeline>
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-<codeline lineno="187"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="204" refid="class_component_1a5ae3e5a33172d0823e16f8ae39a58475" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_component_1a5ae3e5a33172d0823e16f8ae39a58475" kindref="member">nmask</ref><sp/>=<sp/>~mmask;</highlight></codeline>
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-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="207"><highlight class="normal"></highlight></codeline>
-<codeline lineno="209"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="213"></codeline>
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-<codeline lineno="216"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="219"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Used<sp/>in<sp/>computing<sp/>target<sp/>rates<sp/>for</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>load<sp/>balancing</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="222" refid="class_component_1a94c9c37dd58879cace98ae95f0f040e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_1a94c9c37dd58879cace98ae95f0f040e9" kindref="member">round_up</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dnumb);</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Particle<sp/>buffer</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="225" refid="class_component_1aca5c58f9c056a5d60d5692ce1ce71f4e" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;PartPtr&gt;<sp/><ref refid="class_component_1aca5c58f9c056a5d60d5692ce1ce71f4e" kindref="member">pbuf</ref>;</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Adiabatic<sp/>mass</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="228" refid="class_component_1a57396aa140e2721c51c58159d2255f8c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1a57396aa140e2721c51c58159d2255f8c" kindref="member">adiabatic</ref>;</highlight></codeline>
-<codeline lineno="229" refid="class_component_1a538b531d42111fa6d299d97936657f61" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_component_1a121955a595a394fe2b726fd503247d56" kindref="member">ton</ref>,<sp/><ref refid="class_component_1a538b531d42111fa6d299d97936657f61" kindref="member">toff</ref>,<sp/><ref refid="class_component_1a2b03543a52bf5e0333d180d87ba35084" kindref="member">twid</ref>;</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>load<sp/>balancing</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="232" refid="class_component_1a9ad99070adeeb7971901635aa2013e5a" refkind="member"><highlight class="normal"><sp/><sp/>vector<sp/>&lt;loadb_datum&gt;<sp/><ref refid="class_component_1a9ad99070adeeb7971901635aa2013e5a" kindref="member">loadb</ref>;</highlight></codeline>
-<codeline lineno="233" refid="class_component_1a23297897a049080fb87374ad255df787" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a23297897a049080fb87374ad255df787" kindref="member">add_particles</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>from,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>to,<sp/>std::vector&lt;PartPtr&gt;&amp;<sp/>plist);</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Compute<sp/>initial<sp/>com<sp/>position<sp/>and<sp/>velocity<sp/>from<sp/>phase<sp/>space</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="236" refid="class_component_1ae4712b7a15f9a0ea24c40acb1be23d38" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ae4712b7a15f9a0ea24c40acb1be23d38" kindref="member">initialize_com_system</ref>();</highlight></codeline>
-<codeline lineno="237" refid="class_component_1ae297c3e16925d6d3d3cb1dbdce473d1e" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_component_1a0d992dd39f7cf135b29416682e055db5" kindref="member">com_lev</ref>,<sp/><ref refid="class_component_1aab25bd3006e721baee2848017fbbf801" kindref="member">cov_lev</ref>,<sp/><ref refid="class_component_1a259d9e6868991bb5b707944a91c8d9b6" kindref="member">coa_lev</ref>,<sp/><ref refid="class_component_1aacc451ce3964d6b47346294e85ed7d29" kindref="member">com_mas</ref>,<sp/><ref refid="class_component_1ae297c3e16925d6d3d3cb1dbdce473d1e" kindref="member">angmom_lev</ref>;</highlight></codeline>
-<codeline lineno="238" refid="class_component_1a60dd8573759433f7a500cb9b0972b5e2" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_component_1a60dd8573759433f7a500cb9b0972b5e2" kindref="member">comE_lev</ref>,<sp/><ref refid="class_component_1a87a9b29fd44bab104fa2f1b7a75c0ea6" kindref="member">covE_lev</ref>,<sp/><ref refid="class_component_1a529507f8c85511c917e22f52a43c631a" kindref="member">comE_mas</ref>;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"></highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Momentum<sp/>tracking</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="241" refid="class_component_1ac5af2b621e67400e5ee7b54903e01e6f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1ac5af2b621e67400e5ee7b54903e01e6f" kindref="member">consp</ref>;</highlight></codeline>
-<codeline lineno="242" refid="class_component_1a8639cd64f886227fb3ee528fe9b6c8ec" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_1a8639cd64f886227fb3ee528fe9b6c8ec" kindref="member">tidal</ref>;</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>exchanging<sp/>particles</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="245" refid="class_component_1abcdcae11fcf83308c9c94b8c2f25955a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_particle_ferry_8_h_1aaccf181b89a271f9a3cf718cf1ef244b" kindref="member">ParticleFerryPtr</ref><sp/><ref refid="class_component_1abcdcae11fcf83308c9c94b8c2f25955a" kindref="member">pf</ref>;</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight></codeline>
-<codeline lineno="250" refid="class_component_1ac8c59643a14794718cbbfb1f2151a8aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ac8c59643a14794718cbbfb1f2151a8aa" kindref="member">configure</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"></highlight></codeline>
-<codeline lineno="254" refid="class_component_1a243d04fb4db9cec7663537d974bf1bcc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a243d04fb4db9cec7663537d974bf1bcc" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"></highlight></codeline>
-<codeline lineno="257" refid="class_component_1af208b85fa1e7cd46c354adf0ad7a42ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1af208b85fa1e7cd46c354adf0ad7a42ae" kindref="member">initialize_cuda</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"></highlight></codeline>
-<codeline lineno="260" refid="class_component_1a684ffe9b1de313ee18fe59d50dfa55d0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_component_1a684ffe9b1de313ee18fe59d50dfa55d0" kindref="member">azcm_slab</ref>;</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"></highlight></codeline>
-<codeline lineno="263" refid="class_component_1a22d7ed07f07cf4d97f74494b1f627584" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_1a22d7ed07f07cf4d97f74494b1f627584" kindref="member">nbodies</ref>;</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="266" refid="class_component_1a07d7d1f764009209504da8aae2665d44" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_1a07d7d1f764009209504da8aae2665d44" kindref="member">nbodies_tot</ref>;</highlight></codeline>
-<codeline lineno="267"><highlight class="normal"></highlight></codeline>
-<codeline lineno="270" refid="class_component_1acda7ae8cd19e98d614e3bb6d55ed7c36" refkind="member"><highlight class="normal"><sp/><sp/>MPI_Datatype<sp/><ref refid="class_component_1acda7ae8cd19e98d614e3bb6d55ed7c36" kindref="member">Particletype</ref>;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"></highlight></codeline>
-<codeline lineno="273" refid="class_component_1a22f363e3b62857066531d8d68d3a57ba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a22f363e3b62857066531d8d68d3a57ba" kindref="member">setup_distribution</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"></highlight></codeline>
-<codeline lineno="276"></codeline>
-<codeline lineno="277" refid="class_component_1ade102da59d56602ead4ca93da49f3839" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;unsigned<sp/>int&gt;<sp/><ref refid="class_component_1a5619168c2592d702ca00b9e95037509b" kindref="member">nbodies_table</ref>,<sp/><ref refid="class_component_1ade102da59d56602ead4ca93da49f3839" kindref="member">nbodies_index</ref>;</highlight></codeline>
-<codeline lineno="279"></codeline>
-<codeline lineno="281"></codeline>
-<codeline lineno="282" refid="class_component_1ab08c94e5114a3424b454b053476fea60" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_component_1ab08c94e5114a3424b454b053476fea60" kindref="member">orates</ref>,<sp/><ref refid="class_component_1a462779c6f8e80bca001cb92482908db8" kindref="member">trates</ref>;</highlight></codeline>
-<codeline lineno="284"></codeline>
-<codeline lineno="286" refid="class_component_1ac0366f30ceaa60b50deb79465d639428" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1ac0366f30ceaa60b50deb79465d639428" kindref="member">binary</ref>;</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"></highlight></codeline>
-<codeline lineno="289" refid="class_component_1a757e28e3a0d23aef562b657304cec8f8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_component_1a757e28e3a0d23aef562b657304cec8f8" kindref="member">comfile</ref>;</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"></highlight></codeline>
-<codeline lineno="292" refid="class_component_1a41a7edf2b6d52b74ddf132eea41f6616" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_1a41a7edf2b6d52b74ddf132eea41f6616" kindref="member">com_restart</ref>;</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"></highlight></codeline>
-<codeline lineno="295" refid="class_component_1aa13709cc364e1c76eb6dd212f14e28b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1aa13709cc364e1c76eb6dd212f14e28b6" kindref="member">restart_com_system</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"></highlight></codeline>
-<codeline lineno="298" refid="class_component_1a4e10056952a7204727522146c054c3ad" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="include_2_particle_8_h_1a101c54b6d6078eb4deaf9cf51db53c24" kindref="member">PartMap</ref><sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>;</highlight></codeline>
-<codeline lineno="299"><highlight class="normal"></highlight></codeline>
-<codeline lineno="301" refid="class_component_1a3d4b378ebaa143ae561a01a24399d788" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_1a3d4b378ebaa143ae561a01a24399d788" kindref="member">nlevel</ref>;</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"></highlight></codeline>
-<codeline lineno="304" refid="class_component_1a467d23bcf8b471818b5dc3dac2f94144" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component" kindref="compound">Component</ref><sp/>*<ref refid="class_component_1a467d23bcf8b471818b5dc3dac2f94144" kindref="member">c0</ref>;</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"></highlight></codeline>
-<codeline lineno="307" refid="class_component_1a76e39f1b07f6b5e5c5e4997f924855f9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a76e39f1b07f6b5e5c5e4997f924855f9" kindref="member">find_ctr_component</ref>();</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"></highlight></codeline>
-<codeline lineno="310" refid="class_component_1a2d69a7dd1b01ea8a3399bb073aebcb95" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_component_1a2d69a7dd1b01ea8a3399bb073aebcb95" kindref="member">ctr_name</ref>;</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"></highlight></codeline>
-<codeline lineno="313" refid="class_component_1a9946f9403f0b4cca7ebaf9f9f8f1d49e" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CenterFile&gt;<sp/><ref refid="class_component_1a9946f9403f0b4cca7ebaf9f9f8f1d49e" kindref="member">CF</ref>;</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"></highlight></codeline>
-<codeline lineno="316" refid="class_component_1ac8c634a2648824357f617ad1a0b46f47" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ac8c634a2648824357f617ad1a0b46f47" kindref="member">write_binary_mpi_b</ref>(MPI_File&amp;<sp/>out,<sp/>MPI_Offset&amp;<sp/>offset,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"></highlight></codeline>
-<codeline lineno="319" refid="class_component_1a92b1061a6c3400b5de4a8720543bcf55" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a92b1061a6c3400b5de4a8720543bcf55" kindref="member">write_binary_mpi_i</ref>(MPI_File&amp;<sp/>out,<sp/>MPI_Offset&amp;<sp/>offset,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="320"><highlight class="normal"></highlight></codeline>
-<codeline lineno="322" refid="class_component_1a3017cdca5c8002ba840027976b00c1a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a3017cdca5c8002ba840027976b00c1a4" kindref="member">set_default_values</ref>();</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="325" refid="class_component_1a3dda785132ebfbbd1712029ad93d1aa0" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;PartPtr&gt;<sp/><ref refid="class_component_1a3dda785132ebfbbd1712029ad93d1aa0" kindref="member">new_particles</ref>;</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"></highlight></codeline>
-<codeline lineno="328" refid="class_component_1a6d9de3bb5fc070af52147d6db767c826" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_component_1a6d9de3bb5fc070af52147d6db767c826" kindref="member">top_seq</ref>;</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"></highlight></codeline>
-<codeline lineno="331" refid="class_component_1af842f3f884c303ba4d63c3909abba4a6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1af842f3f884c303ba4d63c3909abba4a6" kindref="member">seq_new_particles</ref>();</highlight></codeline>
-<codeline lineno="332"><highlight class="normal"></highlight></codeline>
-<codeline lineno="334" refid="class_component_1a25a4a22b1d92953ca839da5b590501af" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_component_1a25a4a22b1d92953ca839da5b590501af" kindref="member">modified</ref>=0;</highlight></codeline>
-<codeline lineno="335"><highlight class="normal"></highlight></codeline>
-<codeline lineno="337" refid="class_component_1abbefa7e35be2da50fe3d0905791cc3fa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1abbefa7e35be2da50fe3d0905791cc3fa" kindref="member">noswitch</ref>;</highlight></codeline>
-<codeline lineno="338"><highlight class="normal"></highlight></codeline>
-<codeline lineno="340" refid="class_component_1a57f50109123aeb28f75cfcd246b4fc5d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1a57f50109123aeb28f75cfcd246b4fc5d" kindref="member">freezeLev</ref>;</highlight></codeline>
-<codeline lineno="341"><highlight class="normal"></highlight></codeline>
-<codeline lineno="343" refid="class_component_1a5b813abde55037d8602654e91de7a029" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1a5b813abde55037d8602654e91de7a029" kindref="member">dtreset</ref>;</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"></highlight></codeline>
-<codeline lineno="346"><highlight class="normal"></highlight></codeline>
-<codeline lineno="347" refid="class_component_1a0c34ad9d5e8fa206619ea0dbc63682a8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_component_1a0c34ad9d5e8fa206619ea0dbc63682a8" kindref="member">valid_keys_top</ref>;</highlight></codeline>
-<codeline lineno="348" refid="class_component_1a3bce97dc5d9e0251e5a4c6d21b919120" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_component_1a3bce97dc5d9e0251e5a4c6d21b919120" kindref="member">valid_keys_parm</ref>;</highlight></codeline>
-<codeline lineno="349" refid="class_component_1aa1914644c9c535d396fcd363068ed8ea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_component_1aa1914644c9c535d396fcd363068ed8ea" kindref="member">valid_keys_force</ref>;</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"></highlight></codeline>
-<codeline lineno="352"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="353"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="526"><highlight class="normal"></highlight></codeline>
-<codeline lineno="528"><highlight class="normal"></highlight></codeline>
-<codeline lineno="531" refid="class_component_1ae27549cd7c695f2fdeb4ff7ed74f26b5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component_1ae27549cd7c695f2fdeb4ff7ed74f26b5" kindref="member">Component</ref>(YAML::Node&amp;<sp/><ref refid="class_component_1ad869a2b42eef38614b13051c5c0ba2be" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="532"><highlight class="normal"></highlight></codeline>
-<codeline lineno="534" refid="class_component_1a40f7b33f079cfc26a60bc7de2db2318b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component_1a40f7b33f079cfc26a60bc7de2db2318b" kindref="member">Component</ref>(YAML::Node&amp;,<sp/>istream<sp/>*in,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>SPL);</highlight></codeline>
-<codeline lineno="535"><highlight class="normal"></highlight></codeline>
-<codeline lineno="537" refid="class_component_1ab8378fa275af98e568a7e91d33d867af" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component_1ab8378fa275af98e568a7e91d33d867af" kindref="member">~Component</ref>();</highlight></codeline>
-<codeline lineno="538"><highlight class="normal"></highlight></codeline>
-<codeline lineno="540" refid="class_component_1aaff1d638ac8c390460e34e3e90c6854c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/>*<sp/><ref refid="class_component_1aaff1d638ac8c390460e34e3e90c6854c" kindref="member">get_particles</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">*<sp/>number);</highlight></codeline>
-<codeline lineno="541"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="543" refid="class_component_1ab44cb89e5f32b9e3ef57ade7c9f0f2d2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_1ab44cb89e5f32b9e3ef57ade7c9f0f2d2" kindref="member">particle_count</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>node)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="544"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(node&lt;0<sp/>||<sp/>node&gt;=<ref refid="localmpi_8_h_1a31bfe068640b411bea3df0d69177ded5" kindref="member">numprocs</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="545"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_component_1a5619168c2592d702ca00b9e95037509b" kindref="member">nbodies_table</ref>[node];<sp/></highlight></codeline>
-<codeline lineno="546"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="547"><highlight class="normal"></highlight></codeline>
-<codeline lineno="549" refid="class_component_1a865d35697ed26ce03bb9108f8a50fff9" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;unsigned<sp/>int&gt;<sp/><ref refid="class_component_1a865d35697ed26ce03bb9108f8a50fff9" kindref="member">particle_count</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_component_1a5619168c2592d702ca00b9e95037509b" kindref="member">nbodies_table</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="550"><highlight class="normal"></highlight></codeline>
-<codeline lineno="552" refid="class_component_1a24fb4d39fad0820137ffc5126ae726f1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a24fb4d39fad0820137ffc5126ae726f1" kindref="member">write_binary</ref>(ostream<sp/>*out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="553"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="555" refid="class_component_1a788f17d8ee8ecf1ed5b7d7757af6e074" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a788f17d8ee8ecf1ed5b7d7757af6e074" kindref="member">write_binary_header</ref>(ostream*<sp/>out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4,<sp/>std::string<sp/>prefix,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nth=1);</highlight></codeline>
-<codeline lineno="556"><highlight class="normal"></highlight></codeline>
-<codeline lineno="558" refid="class_component_1aa62f2616350d14cb1d037501f36108ed" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1aa62f2616350d14cb1d037501f36108ed" kindref="member">write_binary_particles</ref>(std::ostream*<sp/>out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="559"><highlight class="normal"></highlight></codeline>
-<codeline lineno="561" refid="class_component_1ad9317249b40157d8ecedbb2556d0138e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ad9317249b40157d8ecedbb2556d0138e" kindref="member">write_binary_particles</ref>(std::vector&lt;std::shared_ptr&lt;std::ofstream&gt;&gt;&amp;<sp/>out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="562"><highlight class="normal"></highlight></codeline>
-<codeline lineno="564" refid="class_component_1a75178b05bbf9e5836856eb7c98d55283" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a75178b05bbf9e5836856eb7c98d55283" kindref="member">write_binary_particles</ref>(std::ostream*<sp/>out,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>threads,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="565"><highlight class="normal"></highlight></codeline>
-<codeline lineno="567" refid="class_component_1a3f7535f624689936b9230437ccf716f6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a3f7535f624689936b9230437ccf716f6" kindref="member">write_binary_mpi</ref>(MPI_File&amp;<sp/>out,<sp/>MPI_Offset&amp;<sp/>offset,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="568"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="569"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1ae1664414b3245d7ea268603bfa2cd7f9" kindref="member">blocking</ref>)</highlight></codeline>
-<codeline lineno="570"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_component_1ac8c634a2648824357f617ad1a0b46f47" kindref="member">write_binary_mpi_b</ref>(out,<sp/>offset,<sp/>real4);</highlight></codeline>
-<codeline lineno="571"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="572"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_component_1a92b1061a6c3400b5de4a8720543bcf55" kindref="member">write_binary_mpi_i</ref>(out,<sp/>offset,<sp/>real4);</highlight></codeline>
-<codeline lineno="573"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="574"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="576" refid="class_component_1a145596d9ee76f1486c93046a503fb7cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a145596d9ee76f1486c93046a503fb7cf" kindref="member">write_ascii</ref>(ostream<sp/>*out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1a53f0cec40309de5806d1c424c501b6c5" kindref="member">accel</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="577"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="579" refid="class_component_1aa1d26774d4bd305ea449af5c8ce9d165" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1aa1d26774d4bd305ea449af5c8ce9d165" kindref="member">redistribute_particles</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="580"><highlight class="normal"></highlight></codeline>
-<codeline lineno="582" refid="class_component_1a26769a833e39ac571ed6dacdd60bab72" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a26769a833e39ac571ed6dacdd60bab72" kindref="member">fix_positions_cpu</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>mlevel=0);</highlight></codeline>
-<codeline lineno="583"><highlight class="normal"></highlight></codeline>
-<codeline lineno="584"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight></codeline>
-<codeline lineno="586"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>fix_positions_cuda(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>mlevel=0);</highlight></codeline>
-<codeline lineno="587"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="588"><highlight class="normal"></highlight></codeline>
-<codeline lineno="590" refid="class_component_1a118ca15a00fb10267b9e784a1912ab15" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a118ca15a00fb10267b9e784a1912ab15" kindref="member">fix_positions</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>mlevel=0)</highlight></codeline>
-<codeline lineno="591"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="592"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="593"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="global_8_h_1a0ad8ed6e0196a9477f123c6bf569233b" kindref="member">use_cuda</ref>)<sp/>fix_positions_cuda(mlevel);</highlight></codeline>
-<codeline lineno="594"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="595"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="596"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_component_1a26769a833e39ac571ed6dacdd60bab72" kindref="member">fix_positions_cpu</ref>(mlevel);</highlight></codeline>
-<codeline lineno="597"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="598"><highlight class="normal"></highlight></codeline>
-<codeline lineno="616" refid="class_component_1aa777563cd8c36642e5edec71055fa726" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1aa777563cd8c36642e5edec71055fa726" kindref="member">redistributeByList</ref>(vector&lt;int&gt;&amp;<sp/>redist);</highlight></codeline>
-<codeline lineno="617"><highlight class="normal"></highlight></codeline>
-<codeline lineno="619" refid="class_component_1afbb4b82f97e24f031c1cb582d113cd4c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1afbb4b82f97e24f031c1cb582d113cd4c" kindref="member">update_accel</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="620"><highlight class="normal"></highlight></codeline>
-<codeline lineno="622" refid="class_component_1a828261eec70fd8163ecc47e917d7058a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a828261eec70fd8163ecc47e917d7058a" kindref="member">get_angmom</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>mlevel=0);</highlight></codeline>
-<codeline lineno="623"><highlight class="normal"></highlight></codeline>
-<codeline lineno="625" refid="class_component_1a1a4bd99db8fc0ba08fa1cf746014baa9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_component_1a1a4bd99db8fc0ba08fa1cf746014baa9" kindref="member">Adiabatic</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="626"><highlight class="normal"></highlight></codeline>
-<codeline lineno="628" refid="class_component_1ae85fc224ff8ce7373b09bfa060b7a1c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1ae85fc224ff8ce7373b09bfa060b7a1c8" kindref="member">freeze</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>indx);</highlight></codeline>
-<codeline lineno="629"><highlight class="normal"></highlight></codeline>
-<codeline lineno="631" refid="class_component_1a546ec0be90d0be6a3374afba4cf42357" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1a546ec0be90d0be6a3374afba4cf42357" kindref="member">escape_com</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>&amp;);</highlight></codeline>
-<codeline lineno="632"><highlight class="normal"></highlight></codeline>
-<codeline lineno="634" refid="class_component_1afd5cf6b640f7c479a12268931937b2a2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="include_2_particle_8_h_1a101c54b6d6078eb4deaf9cf51db53c24" kindref="member">PartMap</ref>&amp;<sp/><ref refid="class_component_1afd5cf6b640f7c479a12268931937b2a2" kindref="member">Particles</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="635"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>;</highlight></codeline>
-<codeline lineno="636"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="637"><highlight class="normal"></highlight></codeline>
-<codeline lineno="639" refid="class_component_1a31155d4ef55dce1ed32956b92927b9e1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle" kindref="compound">Particle</ref><sp/>*<ref refid="class_component_1a31155d4ef55dce1ed32956b92927b9e1" kindref="member">Part</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/>i)<sp/>{</highlight></codeline>
-<codeline lineno="640"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="641"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="642"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="643"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="644"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>tp-&gt;second.get();</highlight></codeline>
-<codeline lineno="645"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="646"><highlight class="normal"></highlight></codeline>
-<codeline lineno="648" refid="class_component_1a990da13695cb7ff7a271f1e52013a011" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/><ref refid="class_component_1a990da13695cb7ff7a271f1e52013a011" kindref="member">partPtr</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/>i)<sp/>{</highlight></codeline>
-<codeline lineno="649"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="650"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="651"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="652"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="653"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>tp-&gt;second;</highlight></codeline>
-<codeline lineno="654"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="655"><highlight class="normal"></highlight></codeline>
-<codeline lineno="657" refid="class_component_1af746a287bf9d9a2187fbd72e96f6b715" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_1af746a287bf9d9a2187fbd72e96f6b715" kindref="member">partExists</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/>i)<sp/>{</highlight></codeline>
-<codeline lineno="658"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="659"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="660"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="661"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="662"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="663"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="664"><highlight class="normal"></highlight></codeline>
-<codeline lineno="669" refid="class_component_1a4b11b2f976f09eef885414f2bb9ab214" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle" kindref="compound">Particle</ref><sp/>*<ref refid="class_component_1a4b11b2f976f09eef885414f2bb9ab214" kindref="member">GetNewPart</ref>();</highlight></codeline>
-<codeline lineno="670"><highlight class="normal"></highlight></codeline>
-<codeline lineno="672" refid="class_component_1a43d296319899e182ef716331ae5d08a6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a43d296319899e182ef716331ae5d08a6" kindref="member">AddPart</ref>(<ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/>p);</highlight></codeline>
-<codeline lineno="673"><highlight class="normal"></highlight></codeline>
-<codeline lineno="675" refid="class_component_1af429f6c5a793b0b7014557c0942e75f4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1af429f6c5a793b0b7014557c0942e75f4" kindref="member">DestroyPart</ref>(<ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/>p);</highlight></codeline>
-<codeline lineno="676"><highlight class="normal"></highlight></codeline>
-<codeline lineno="678" refid="class_component_1a24fdb356925bd304d6bbdf443317c89f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a24fdb356925bd304d6bbdf443317c89f" kindref="member">ErasePart</ref>(<ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/>p)</highlight></codeline>
-<codeline lineno="679"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="680"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.erase(p-&gt;indx);</highlight></codeline>
-<codeline lineno="681"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_component_1a22d7ed07f07cf4d97f74494b1f627584" kindref="member">nbodies</ref><sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size();</highlight></codeline>
-<codeline lineno="682"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="683"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="685" refid="class_component_1ae6619f5e2df2ad8816c4aae756ca66c9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_component_1ae6619f5e2df2ad8816c4aae756ca66c9" kindref="member">Number</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="686"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size();</highlight></codeline>
-<codeline lineno="687"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="688"><highlight class="normal"></highlight></codeline>
-<codeline lineno="690" refid="class_component_1a19a8ac34f26702235706c33b9161e31e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_component_1a19a8ac34f26702235706c33b9161e31e" kindref="member">CurTotal</ref>()</highlight></codeline>
-<codeline lineno="691"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="692"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_component_1a07d7d1f764009209504da8aae2665d44" kindref="member">nbodies_tot</ref>;</highlight></codeline>
-<codeline lineno="693"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="694"><highlight class="normal"></highlight></codeline>
-<codeline lineno="697" refid="class_component_1a23c92e334b677f3707fba31455fe05f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_component_1a23c92e334b677f3707fba31455fe05f2" kindref="member">NewTotal</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="698"><highlight class="normal"><sp/><sp/><sp/><sp/>MPI_Allreduce(MPI_IN_PLACE,<sp/>&amp;<ref refid="class_component_1a25a4a22b1d92953ca839da5b590501af" kindref="member">modified</ref>,<sp/>1,<sp/>MPI_UNSIGNED,<sp/>MPI_SUM,</highlight></codeline>
-<codeline lineno="699"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>MPI_COMM_WORLD);</highlight></codeline>
-<codeline lineno="700"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a25a4a22b1d92953ca839da5b590501af" kindref="member">modified</ref>)<sp/><ref refid="class_component_1af842f3f884c303ba4d63c3909abba4a6" kindref="member">seq_new_particles</ref>();</highlight></codeline>
-<codeline lineno="701"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_component_1a07d7d1f764009209504da8aae2665d44" kindref="member">nbodies_tot</ref>;</highlight></codeline>
-<codeline lineno="702"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="703"><highlight class="normal"></highlight></codeline>
-<codeline lineno="705" refid="class_component_1a5fd7c38d5553346bf9266f691263db1d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_component_1a5fd7c38d5553346bf9266f691263db1d" kindref="member">Mass</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{</highlight></codeline>
-<codeline lineno="706"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="707"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="708"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="709"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="710"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>tp-&gt;second-&gt;mass;</highlight></codeline>
-<codeline lineno="711"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="712"><highlight class="normal"></highlight></codeline>
-<codeline lineno="714" refid="class_component_1a994901da4204a29704874b1c1eb44f55" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_component_1a994901da4204a29704874b1c1eb44f55" kindref="member">Pos</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)</highlight></codeline>
-<codeline lineno="715"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="716"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="717"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="718"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="719"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="720"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val<sp/>=<sp/>tp-&gt;second-&gt;pos[j];</highlight></codeline>
-<codeline lineno="721"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>val<sp/>-=<sp/><ref refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" kindref="member">com0</ref>[j];</highlight></codeline>
-<codeline lineno="722"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>val<sp/>-=<sp/><ref refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" kindref="member">center</ref>[j];</highlight></codeline>
-<codeline lineno="723"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>val;</highlight></codeline>
-<codeline lineno="724"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="725"><highlight class="normal"></highlight></codeline>
-<codeline lineno="727" refid="class_component_1a816435a03232966d22ca427874e8dc4a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_component_1a816435a03232966d22ca427874e8dc4a" kindref="member">getCenter</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)</highlight></codeline>
-<codeline lineno="728"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="729"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/>ret(3,<sp/>0.0);</highlight></codeline>
-<codeline lineno="730"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;3;<sp/>j++)<sp/>{</highlight></codeline>
-<codeline lineno="731"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>ret[j]<sp/>+=<sp/><ref refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" kindref="member">com0</ref>[j];</highlight></codeline>
-<codeline lineno="732"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>ret[j]<sp/>+=<sp/><ref refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" kindref="member">center</ref>[j];</highlight></codeline>
-<codeline lineno="733"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="734"><highlight class="normal"></highlight></codeline>
-<codeline lineno="735"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="736"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="737"><highlight class="normal"></highlight></codeline>
-<codeline lineno="739" refid="class_component_1a73f9ed983dd632e1714a694a31303214" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_component_1a73f9ed983dd632e1714a694a31303214" kindref="member">Vel</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="740"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="741"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="742"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="743"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="744"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val<sp/>=<sp/>tp-&gt;second-&gt;vel[j];</highlight></codeline>
-<codeline lineno="745"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>val<sp/>-=<sp/><ref refid="class_component_1a986eae6a0994950d9401462e913dbc9e" kindref="member">cov0</ref>[j];</highlight></codeline>
-<codeline lineno="746"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>val;</highlight></codeline>
-<codeline lineno="747"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="748"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="750" refid="class_component_1a8d01b4883e90afac5c75019d7123200f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a8d01b4883e90afac5c75019d7123200f" kindref="member">Pos</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*pos,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="751"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="752"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="753"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="754"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="755"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>{</highlight></codeline>
-<codeline lineno="756"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>pos[k]<sp/>=<sp/>tp-&gt;second-&gt;pos[k];</highlight></codeline>
-<codeline lineno="757"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>pos[k]<sp/>-=<sp/><ref refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" kindref="member">com0</ref>[k];</highlight></codeline>
-<codeline lineno="758"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>pos[k]<sp/>-=<sp/><ref refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" kindref="member">center</ref>[k];</highlight></codeline>
-<codeline lineno="759"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="760"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="761"><highlight class="normal"></highlight></codeline>
-<codeline lineno="763" refid="class_component_1adf9d24409865914ebbd72e60a91eba07" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1adf9d24409865914ebbd72e60a91eba07" kindref="member">Vel</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*vel,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="764"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="765"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="766"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="767"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="768"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>{</highlight></codeline>
-<codeline lineno="769"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>vel[k]<sp/>=<sp/>tp-&gt;second-&gt;vel[k];</highlight></codeline>
-<codeline lineno="770"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>vel[k]<sp/>-=<sp/><ref refid="class_component_1a986eae6a0994950d9401462e913dbc9e" kindref="member">cov0</ref>[k];</highlight></codeline>
-<codeline lineno="771"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="772"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="773"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="775" refid="class_component_1a0d6d65427000e1777ef439d82ee84fac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a0d6d65427000e1777ef439d82ee84fac" kindref="member">ConvertPos</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>pos,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref><sp/>|<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="776"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="777"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>{</highlight></codeline>
-<codeline lineno="778"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>pos[k]<sp/>-=<sp/><ref refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" kindref="member">com0</ref>[k];<sp/></highlight></codeline>
-<codeline lineno="779"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>pos[k]<sp/>-=<sp/><ref refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" kindref="member">center</ref>[k];</highlight></codeline>
-<codeline lineno="780"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="781"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="782"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="784" refid="class_component_1a7ca665f88447d50ae31427cdebed4c1d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a7ca665f88447d50ae31427cdebed4c1d" kindref="member">ConvertVel</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>vel,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref><sp/>|<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="785"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="786"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>{</highlight></codeline>
-<codeline lineno="787"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>vel[k]<sp/>-=<sp/><ref refid="class_component_1a986eae6a0994950d9401462e913dbc9e" kindref="member">cov0</ref>[k];<sp/></highlight></codeline>
-<codeline lineno="788"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="789"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="791" refid="class_component_1a78c8d92520eceee58e5906ab3a9a47ec" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a78c8d92520eceee58e5906ab3a9a47ec" kindref="member">PosConvert</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>pos,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref><sp/>|<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="792"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="793"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>{</highlight></codeline>
-<codeline lineno="794"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>pos[k]<sp/>+=<sp/><ref refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" kindref="member">com0</ref>[k];<sp/></highlight></codeline>
-<codeline lineno="795"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>pos[k]<sp/>+=<sp/><ref refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" kindref="member">center</ref>[k];</highlight></codeline>
-<codeline lineno="796"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="797"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="798"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="800" refid="class_component_1af2c76f5a207878f124452b9e23a0c0d0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1af2c76f5a207878f124452b9e23a0c0d0" kindref="member">VelConvert</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>vel,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref><sp/>|<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="801"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="802"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>{</highlight></codeline>
-<codeline lineno="803"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>)<sp/>vel[k]<sp/>+=<sp/><ref refid="class_component_1a986eae6a0994950d9401462e913dbc9e" kindref="member">cov0</ref>[k];<sp/></highlight></codeline>
-<codeline lineno="804"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="805"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="806"><highlight class="normal"></highlight></codeline>
-<codeline lineno="808" refid="class_component_1ab070226049c137d9b084dec0e562118d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_component_1ab070226049c137d9b084dec0e562118d" kindref="member">Acc</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>flags=<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="809"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="810"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="811"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="812"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="813"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val<sp/>=<sp/>tp-&gt;second-&gt;acc[j];</highlight></codeline>
-<codeline lineno="814"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_component_1a7430627b74f8a440007f516840e36d36" kindref="member">com_system</ref><sp/>and<sp/>flags<sp/>&amp;<sp/><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref>)<sp/>val<sp/>+=<sp/><ref refid="class_component_1a10fb714b30dd698643eabd16a19bf7ae" kindref="member">acc0</ref>[j];</highlight></codeline>
-<codeline lineno="815"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>val;</highlight></codeline>
-<codeline lineno="816"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="817"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="819" refid="class_component_1acb0302368116715b8686e00477246572" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1acb0302368116715b8686e00477246572" kindref="member">AddPos</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="820"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="821"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="822"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="823"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="824"><highlight class="normal"><sp/><sp/><sp/><sp/>tp-&gt;second-&gt;pos[j]<sp/>+=<sp/>val;</highlight></codeline>
-<codeline lineno="825"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="826"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="828" refid="class_component_1ab83c7987fb5fb71833147dcc1e338e20" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ab83c7987fb5fb71833147dcc1e338e20" kindref="member">AddPos</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="829"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="830"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="831"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="832"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="833"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>tp-&gt;second-&gt;pos[k]<sp/>+=<sp/>val[k];</highlight></codeline>
-<codeline lineno="834"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="835"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="837" refid="class_component_1ada3a98e89d9e5ea07d192b472af747bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ada3a98e89d9e5ea07d192b472af747bb" kindref="member">AddPos</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/>vector&lt;double&gt;&amp;<sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="838"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="839"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="840"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="841"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="842"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>tp-&gt;second-&gt;pos[k]<sp/>+=<sp/>val[k];</highlight></codeline>
-<codeline lineno="843"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="844"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="846" refid="class_component_1a16fcb5b61a047393f49be86b59c22cbb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a16fcb5b61a047393f49be86b59c22cbb" kindref="member">AddVel</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="847"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="848"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="849"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="850"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="851"><highlight class="normal"><sp/><sp/><sp/><sp/>tp-&gt;second-&gt;vel[j]<sp/>+=<sp/>val;</highlight></codeline>
-<codeline lineno="852"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="853"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="855" refid="class_component_1aca9d253e487e775096e6d80e8d61274a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1aca9d253e487e775096e6d80e8d61274a" kindref="member">AddVel</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="856"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="857"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="858"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="859"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="860"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>tp-&gt;second-&gt;vel[k]<sp/>+=<sp/>val[k];</highlight></codeline>
-<codeline lineno="861"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="862"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="864" refid="class_component_1ac294b45998258f92ba52dd7b5783fdd9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ac294b45998258f92ba52dd7b5783fdd9" kindref="member">AddVel</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/>vector&lt;double&gt;&amp;<sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="865"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="866"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="867"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="868"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="869"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>tp-&gt;second-&gt;vel[k]<sp/>+=<sp/>val[k];</highlight></codeline>
-<codeline lineno="870"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="871"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="873" refid="class_component_1acd2f2abc50bff4863a8c5c094f53a9f4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1acd2f2abc50bff4863a8c5c094f53a9f4" kindref="member">AddAcc</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="874"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="875"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="876"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="877"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="878"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>acc<sp/>=<sp/><ref refid="class_component_1acd11e798032a8956ce32a68bebb3264b" kindref="member">getPseudoAccel</ref>(tp-&gt;second-&gt;pos,<sp/>tp-&gt;second-&gt;vel);</highlight></codeline>
-<codeline lineno="879"><highlight class="normal"><sp/><sp/><sp/><sp/>tp-&gt;second-&gt;acc[j]<sp/>+=<sp/>val<sp/>-<sp/>acc[j];</highlight></codeline>
-<codeline lineno="880"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="881"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="883" refid="class_component_1ae8bc67b6fa0754f4d7bab47d0e41e735" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ae8bc67b6fa0754f4d7bab47d0e41e735" kindref="member">AddAccExt</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="884"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="885"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="886"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="887"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="888"><highlight class="normal"><sp/><sp/><sp/><sp/>tp-&gt;second-&gt;acc[j]<sp/>+=<sp/>val;</highlight></codeline>
-<codeline lineno="889"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="890"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="892" refid="class_component_1a7b3e043e1326d33dc24e929b71256e10" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a7b3e043e1326d33dc24e929b71256e10" kindref="member">AddAcc</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*val)<sp/>{</highlight></codeline>
-<codeline lineno="893"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="894"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="895"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="896"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="897"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>acc<sp/>=<sp/><ref refid="class_component_1acd11e798032a8956ce32a68bebb3264b" kindref="member">getPseudoAccel</ref>(tp-&gt;second-&gt;pos,<sp/>tp-&gt;second-&gt;vel);</highlight></codeline>
-<codeline lineno="898"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)</highlight></codeline>
-<codeline lineno="899"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>tp-&gt;second-&gt;acc[k]<sp/>+=<sp/>val[k]<sp/>-<sp/>acc[k];</highlight></codeline>
-<codeline lineno="900"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="901"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="903" refid="class_component_1ace0f57229b9d45efdb5923ec220963ce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ace0f57229b9d45efdb5923ec220963ce" kindref="member">AddAccExt</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*val)<sp/>{</highlight></codeline>
-<codeline lineno="904"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="905"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="906"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="907"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="908"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>tp-&gt;second-&gt;acc[k]<sp/>+=<sp/>val[k];</highlight></codeline>
-<codeline lineno="909"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="910"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="912" refid="class_component_1a9ce743bf55de9d8279d9654b136cc771" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a9ce743bf55de9d8279d9654b136cc771" kindref="member">AddAcc</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/>vector&lt;double&gt;&amp;<sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="913"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="914"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="915"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="916"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="917"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>acc<sp/>=<sp/><ref refid="class_component_1acd11e798032a8956ce32a68bebb3264b" kindref="member">getPseudoAccel</ref>(tp-&gt;second-&gt;pos,<sp/>tp-&gt;second-&gt;vel);</highlight></codeline>
-<codeline lineno="918"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)</highlight></codeline>
-<codeline lineno="919"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>tp-&gt;second-&gt;acc[k]<sp/>+=<sp/>val[k]<sp/>-<sp/>acc[k];</highlight></codeline>
-<codeline lineno="920"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="921"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="923" refid="class_component_1aacab15006fb4c8059727eaf82b323d5d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1aacab15006fb4c8059727eaf82b323d5d" kindref="member">AddAccExt</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/>vector&lt;double&gt;&amp;<sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="924"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="925"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="926"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="927"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="928"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0;<sp/>k&lt;3;<sp/>k++)<sp/>tp-&gt;second-&gt;acc[k]<sp/>+=<sp/>val[k];</highlight></codeline>
-<codeline lineno="929"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="930"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="932" refid="class_component_1a22a979ed161bc9c09d764ee76a4f6061" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a22a979ed161bc9c09d764ee76a4f6061" kindref="member">AddPot</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="933"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="934"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="935"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="936"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="937"><highlight class="normal"><sp/><sp/><sp/><sp/>tp-&gt;second-&gt;pot<sp/>+=<sp/>val;</highlight></codeline>
-<codeline lineno="938"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="939"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="941" refid="class_component_1a378e8777cc0508f178aa4c19bef3c3bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a378e8777cc0508f178aa4c19bef3c3bb" kindref="member">AddPotExt</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>val)<sp/>{</highlight></codeline>
-<codeline lineno="942"><highlight class="normal"><sp/><sp/><sp/><sp/>PartMap::iterator<sp/>tp<sp/>=<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.find(i);</highlight></codeline>
-<codeline lineno="943"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tp<sp/>==<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end())<sp/>{</highlight></codeline>
-<codeline lineno="944"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref>(i,<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.size(),<sp/>__FILE__,<sp/>__LINE__);</highlight></codeline>
-<codeline lineno="945"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="946"><highlight class="normal"><sp/><sp/><sp/><sp/>tp-&gt;second-&gt;potext<sp/>+=<sp/>val;</highlight></codeline>
-<codeline lineno="947"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="948"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="950" refid="class_component_1ab2a0f57ab95ac8ac70cf79d5a3cfdce9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1ab2a0f57ab95ac8ac70cf79d5a3cfdce9" kindref="member">reset_level_lists</ref>();</highlight></codeline>
-<codeline lineno="951"><highlight class="normal"></highlight></codeline>
-<codeline lineno="953" refid="class_component_1a01580b9691dc104fa3f585a4fb9e2658" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_1a01580b9691dc104fa3f585a4fb9e2658" kindref="member">print_level_lists</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>T);</highlight></codeline>
-<codeline lineno="954"><highlight class="normal"></highlight></codeline>
-<codeline lineno="956" refid="class_component_1af25f0ad22c5ce951970bf544db45fa0e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_timer" kindref="compound">Timer</ref><sp/><ref refid="class_component_1af25f0ad22c5ce951970bf544db45fa0e" kindref="member">time_so_far</ref>;</highlight></codeline>
-<codeline lineno="957"><highlight class="normal"></highlight></codeline>
-<codeline lineno="959" refid="class_component_1a3d90d8e34006bd62686c42aaa031cf80" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_component_1a3d90d8e34006bd62686c42aaa031cf80" kindref="member">get_time_sofar</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_component_1af25f0ad22c5ce951970bf544db45fa0e" kindref="member">time_so_far</ref>.<ref refid="class_timer_1a490604efc23a4ff9bef8d1f9f418ecb2" kindref="member">getTime</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="960"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="975"><highlight class="normal"></highlight></codeline>
-<codeline lineno="976"><highlight class="normal"></highlight></codeline>
-<codeline lineno="978"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cudaDevice;</highlight></codeline>
-<codeline lineno="979"><highlight class="normal"></highlight></codeline>
-<codeline lineno="980"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>thrust::host_vector&lt;cudaParticle&gt;<sp/>hostPartType;</highlight></codeline>
-<codeline lineno="981"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>thrust::host_vector&lt;cudaParticle&gt;::iterator<sp/>hostPartItr;</highlight></codeline>
-<codeline lineno="982"><highlight class="normal"></highlight></codeline>
-<codeline lineno="984"><highlight class="normal"><sp/><sp/>hostPartType<sp/>host_particles;</highlight></codeline>
-<codeline lineno="985"><highlight class="normal"></highlight></codeline>
-<codeline lineno="987"></codeline>
-<codeline lineno="988"></codeline>
-<codeline lineno="990"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">cudaStreamData</highlight></codeline>
-<codeline lineno="991"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="992"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="993"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>totalInstances;</highlight></codeline>
-<codeline lineno="994"><highlight class="normal"></highlight></codeline>
-<codeline lineno="995"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="997"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>instance,<sp/>id;</highlight></codeline>
-<codeline lineno="998"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1000"><highlight class="normal"><sp/><sp/><sp/><sp/>hostPartItr<sp/>first,<sp/>last;</highlight></codeline>
-<codeline lineno="1001"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1003"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cudaParticle&gt;<sp/>cuda_particles;</highlight></codeline>
-<codeline lineno="1004"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1006"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;int&gt;<sp/>levList;</highlight></codeline>
-<codeline lineno="1007"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1009"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;thrust::pair&lt;int,<sp/>int&gt;&gt;<sp/>levPair;</highlight></codeline>
-<codeline lineno="1010"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1012"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;int&gt;<sp/>indx1,<sp/>indx2;</highlight></codeline>
-<codeline lineno="1013"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1015"><highlight class="normal"><sp/><sp/><sp/><sp/>cudaStream_t<sp/>stream;</highlight></codeline>
-<codeline lineno="1016"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1018"><highlight class="normal"><sp/><sp/><sp/><sp/>cudaStreamData();</highlight></codeline>
-<codeline lineno="1019"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1021"><highlight class="normal"><sp/><sp/><sp/><sp/>~cudaStreamData();</highlight></codeline>
-<codeline lineno="1022"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1023"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1025"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_initialize();</highlight></codeline>
-<codeline lineno="1026"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1027"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;cudaStreamData&gt;<sp/>cuSharedStream;</highlight></codeline>
-<codeline lineno="1028"><highlight class="normal"><sp/><sp/>cuSharedStream<sp/>cuStream;</highlight></codeline>
-<codeline lineno="1030"></codeline>
-<codeline lineno="1032"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>HostToDev(cuSharedStream<sp/>cr);</highlight></codeline>
-<codeline lineno="1033"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="1035"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>DevToHost(cuSharedStream<sp/>cr);</highlight></codeline>
-<codeline lineno="1036"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1038"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>ParticlesToCuda(PartMap::iterator<sp/>beg,<sp/>PartMap::iterator<sp/>fin);</highlight></codeline>
-<codeline lineno="1039"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1041"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>ParticlesToCuda()</highlight></codeline>
-<codeline lineno="1042"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1043"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Copy<sp/>from<sp/>Particle<sp/>to<sp/>cudaParticle</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1044"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1045"><highlight class="normal"><sp/><sp/><sp/><sp/>ParticlesToCuda(<ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.begin(),<sp/><ref refid="class_component_1a4e10056952a7204727522146c054c3ad" kindref="member">particles</ref>.end());</highlight></codeline>
-<codeline lineno="1046"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1047"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Push<sp/>to<sp/>device</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1048"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1049"><highlight class="normal"><sp/><sp/><sp/><sp/>HostToDev(cuStream);</highlight></codeline>
-<codeline lineno="1050"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1051"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1053"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>CudaToParticles(hostPartItr<sp/>beg,<sp/>hostPartItr<sp/>end);</highlight></codeline>
-<codeline lineno="1054"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1056"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>CudaToParticles()</highlight></codeline>
-<codeline lineno="1057"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1058"><highlight class="normal"><sp/><sp/><sp/><sp/>DevToHost(cuStream);<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Pull<sp/>from<sp/>device</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1059"><highlight class="normal"><sp/><sp/><sp/><sp/>CudaToParticles(cuStream-&gt;first,<sp/>cuStream-&gt;last);</highlight></codeline>
-<codeline lineno="1060"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1061"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1063"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>MakeLevlist();</highlight></codeline>
-<codeline lineno="1064"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1066"><highlight class="normal"><sp/><sp/>std::pair&lt;unsigned,<sp/>unsigned&gt;<sp/>CudaGetLevelRange(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>hi);</highlight></codeline>
-<codeline lineno="1067"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1068"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">PII<sp/><sp/><sp/>=<sp/>std::pair&lt;unsigned<sp/>int,<sp/>unsigned<sp/>int&gt;;</highlight></codeline>
-<codeline lineno="1069"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">I1vec<sp/>=<sp/>std::vector&lt;PII&gt;;</highlight></codeline>
-<codeline lineno="1070"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">I2vec<sp/>=<sp/>std::vector&lt;I1vec&gt;;</highlight></codeline>
-<codeline lineno="1071"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1073"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>CudaSortByLevel();</highlight></codeline>
-<codeline lineno="1074"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1076"><highlight class="normal"><sp/><sp/>I2vec<sp/>CudaSortLevelChanges();</highlight></codeline>
-<codeline lineno="1077"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1079"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>ZeroPotAccel(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlevel);</highlight></codeline>
-<codeline lineno="1080"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1082"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>bunchSize;</highlight></codeline>
-<codeline lineno="1083"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1085"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>print_level_lists_cuda(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>T);</highlight></codeline>
-<codeline lineno="1086"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1088"><highlight class="normal"><sp/><sp/>std::vector&lt;int&gt;<sp/>get_level_lists_cuda();</highlight></codeline>
-<codeline lineno="1089"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1091"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1092"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;int&gt;<sp/><sp/><sp/>loLev,<sp/>hiLev;</highlight></codeline>
-<codeline lineno="1093"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;float&gt;<sp/>minDT,<sp/>maxDT;</highlight></codeline>
-<codeline lineno="1095"></codeline>
-<codeline lineno="1097"><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1098"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1099"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="1100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1101"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/Component.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_component_container_8_h.xml b/doxyxml/_component_container_8_h.xml
deleted file mode 100644
index 950ac57..0000000
--- a/doxyxml/_component_container_8_h.xml
+++ /dev/null
@@ -1,610 +0,0 @@
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-<codeline lineno="97" refid="class_component_container_1ae1cc051885b8ee9bd14f512596f9baa0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1ae1cc051885b8ee9bd14f512596f9baa0" kindref="member">ntot</ref>;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_component_container_1ace53fce3e9cf82f626cab6852ba041ba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1ace53fce3e9cf82f626cab6852ba041ba" kindref="member">ncomp</ref>;</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103" refid="class_component_container_1add42db02d8c0869c2d2c697de31051b2" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;Component*&gt;<sp/><ref refid="class_component_container_1add42db02d8c0869c2d2c697de31051b2" kindref="member">components</ref>;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>HAVE_LIBCUDA</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/>std::map&lt;Component*,<sp/>bool&gt;<sp/>fetched;</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="class_component_container_1a38fe2ad1bc9d883b9ba85f708a8d46ba" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;std::shared_ptr&lt;Interaction&gt;&gt;<sp/><ref refid="class_component_container_1a38fe2ad1bc9d883b9ba85f708a8d46ba" kindref="member">interaction</ref>;</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115" refid="class_component_container_1a4238fbcab76a4cd1afe7fc501076ef2f" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_component_container_1a4238fbcab76a4cd1afe7fc501076ef2f" kindref="member">rates</ref>;</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_component_container_1a6c12392bc2fe8a6629af67515b84f07e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component_container_1a6c12392bc2fe8a6629af67515b84f07e" kindref="member">ComponentContainer</ref>();</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121" refid="class_component_container_1a329537eded5d0eaaf7349508565fca1f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component_container_1a329537eded5d0eaaf7349508565fca1f" kindref="member">~ComponentContainer</ref>();</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124" refid="class_component_container_1a465c9617d0a6662b74e5abbac1a2497a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1a465c9617d0a6662b74e5abbac1a2497a" kindref="member">initialize</ref>();</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127" refid="class_component_container_1a09ca3e641b3b32296872e02cb7890b54" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1a09ca3e641b3b32296872e02cb7890b54" kindref="member">compute_potential</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>mlevel=0);</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="131" refid="class_component_container_1aea1f6e17d4e6f19c6f4171bd50ef892c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1aea1f6e17d4e6f19c6f4171bd50ef892c" kindref="member">compute_expansion</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>mlevel=0);</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134" refid="class_component_container_1a512225ab116025f9f5296f118aa2e180" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1a512225ab116025f9f5296f118aa2e180" kindref="member">multistep_reset</ref>();</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"></highlight></codeline>
-<codeline lineno="138" refid="class_component_container_1aedc46c63773555bf85a655df09f228ef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1aedc46c63773555bf85a655df09f228ef" kindref="member">print_level_lists</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>T);</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="class_component_container_1a73154b0b8ae2c31864ee6d3b1516b110" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1a73154b0b8ae2c31864ee6d3b1516b110" kindref="member">print_level_list_header</ref>();</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="144" refid="class_component_container_1acb9f232d7050e4f549ba5930a9fa0d79" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1acb9f232d7050e4f549ba5930a9fa0d79" kindref="member">multistep_debug</ref>();</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147" refid="class_component_container_1ac5d29ab1c974cf3463f11387f279a690" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1ac5d29ab1c974cf3463f11387f279a690" kindref="member">bad_values</ref>();</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153" refid="class_component_container_1a1367d13fca097001917ccbc6cf52e06e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1a1367d13fca097001917ccbc6cf52e06e" kindref="member">fix_positions</ref>();</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156" refid="class_component_container_1a3beee4581ad3ccef3a53f4446e72a46e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1a3beee4581ad3ccef3a53f4446e72a46e" kindref="member">fix_acceleration</ref>();</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_component_container_1a60cf3d818dfad83fcbd82fc1f1cf627f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1a60cf3d818dfad83fcbd82fc1f1cf627f" kindref="member">read_rates</ref>();</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_component_container_1ac0730ed7ad40469efdf9f5a9fdfd73d7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1ac0730ed7ad40469efdf9f5a9fdfd73d7" kindref="member">report_numbers</ref>();</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165" refid="class_component_container_1ad30a09c57fb3e3e286ff27245237e1fc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_component_container_1ad30a09c57fb3e3e286ff27245237e1fc" kindref="member">load_balance</ref>();</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/ComponentContainer.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_cspline_8_h.xml b/doxyxml/_cspline_8_h.xml
deleted file mode 100644
index 9fa7c98..0000000
--- a/doxyxml/_cspline_8_h.xml
+++ /dev/null
@@ -1,177 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_cspline_8_h" kind="file" language="C++">
-    <compoundname>Cspline.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">vector</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/Cspline.H</label>
-        <link refid="_cspline_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_cspline" prot="public">Cspline</innerclass>
-    <innerclass refid="class_cspline_1_1_element" prot="protected">Cspline::Element</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>-*-<sp/>C++<sp/>-*-</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>Cspline_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>Cspline_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>X,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>Y&gt;</highlight></codeline>
-<codeline lineno="14" refid="class_cspline" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cspline" kindref="compound">Cspline</ref><sp/></highlight></codeline>
-<codeline lineno="15"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_cspline_1ac98f7297092af1eb9d4909c171bdcec2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cspline_1ac98f7297092af1eb9d4909c171bdcec2" kindref="member">Cspline</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="22" refid="class_cspline_1ad6fa4d810f545fe1967399d20eceb378" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cspline_1ad6fa4d810f545fe1967399d20eceb378" kindref="member">Cspline</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;X&gt;&amp;<sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;Y&gt;&amp;<sp/>y)<sp/></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x.size()<sp/>!=<sp/>y.size())<sp/>{</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;X[&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>x.size()<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;]<sp/>and<sp/>Y[&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>y.size()</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;]<sp/>must<sp/>be<sp/>the<sp/>same<sp/>size<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x.size()<sp/>&lt;<sp/>3)<sp/>{</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Must<sp/>have<sp/>at<sp/>least<sp/>three<sp/>points<sp/>for<sp/>interpolation,<sp/>&quot;</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;current<sp/>size<sp/>is<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>x.size()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::vector&lt;X&gt;::difference_type<sp/>size_type;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/>size_type<sp/>n<sp/>=<sp/>y.size()<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;Y&gt;<sp/>b(n),<sp/>d(n),<sp/>a(n),<sp/>c(n+1),<sp/>l(n+1),<sp/>u(n+1),<sp/>z(n+1);</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;X&gt;<sp/>h(n+1);</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/>l[0]<sp/>=<sp/>Y(1);</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/>u[0]<sp/>=<sp/>Y(0);</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/>z[0]<sp/>=<sp/>Y(0);</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/>h[0]<sp/>=<sp/>x[1]<sp/>-<sp/>x[0];</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(size_type<sp/>i<sp/>=<sp/>1;<sp/>i<sp/>&lt;<sp/>n;<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>h[i]<sp/>=<sp/>x[i+1]<sp/>-<sp/>x[i];</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>l[i]<sp/>=<sp/>Y(2<sp/>*<sp/>(x[i+1]<sp/>-<sp/>x[i-1]))<sp/>-<sp/>Y(h[i-1])<sp/>*<sp/>u[i-1];</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>u[i]<sp/>=<sp/>Y(h[i])<sp/>/<sp/>l[i];</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>a[i]<sp/>=<sp/>(Y(3)<sp/>/<sp/>Y(h[i]))<sp/>*<sp/>(y[i+1]<sp/>-<sp/>y[i])<sp/>-<sp/>(Y(3)<sp/>/<sp/>Y(h[i-1]))<sp/>*<sp/>(y[i]<sp/>-<sp/>y[i-1]);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>z[i]<sp/>=<sp/>(a[i]<sp/>-<sp/>Y(h[i-1])<sp/>*<sp/>z[i-1])<sp/>/<sp/>l[i];</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/>l[n]<sp/>=<sp/>Y(1);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/>z[n]<sp/>=<sp/>c[n]<sp/>=<sp/>Y(0);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(size_type<sp/>j<sp/>=<sp/>n-1;<sp/>j<sp/>&gt;=<sp/>0;<sp/>j--)<sp/>{</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>c[j]<sp/>=<sp/>z[j]<sp/>-<sp/>u[j]<sp/>*<sp/>c[j+1];</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>b[j]<sp/>=<sp/>(y[j+1]<sp/>-<sp/>y[j])<sp/>/<sp/>Y(h[j])<sp/>-<sp/>(Y(h[j])<sp/>*<sp/>(c[j+1]<sp/>+<sp/>Y(2)<sp/>*<sp/>c[j]))<sp/>/<sp/>Y(3);</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>d[j]<sp/>=<sp/>(c[j+1]<sp/>-<sp/>c[j])<sp/>/<sp/>Y(3<sp/>*<sp/>h[j]);</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(size_type<sp/>i<sp/>=<sp/>0;<sp/>i<sp/>&lt;<sp/>n;<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cspline_1ae15b871aeb0f0e4485237f5946a80f78" kindref="member">elems</ref>.push_back(<ref refid="class_cspline_1_1_element" kindref="compound">Element</ref>(x[i],<sp/>y[i],<sp/>b[i],<sp/>c[i],<sp/>d[i]));</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="75"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
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-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::vector&lt;element_type&gt;::const_iterator<sp/>it;</highlight></codeline>
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-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cspline_1ae15b871aeb0f0e4485237f5946a80f78" kindref="member">elems</ref>.size()<sp/>==<sp/>0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::vector&lt;Y&gt;(xx.size());</highlight></codeline>
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-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
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-<codeline lineno="121"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" kindref="member">x</ref>(_x),<sp/><ref refid="class_cspline_1_1_element_1ab8eee4f586ed59e3ec087886a51c3962" kindref="member">a</ref>(_a),<sp/><ref refid="class_cspline_1_1_element_1ae271037d9bb62ce91a78940c36300209" kindref="member">b</ref>(_b),<sp/><ref refid="class_cspline_1_1_element_1a56d0aaef4e3e6f669bf3d564fe1f5ef3" kindref="member">c</ref>(_c),<sp/><ref refid="class_cspline_1_1_element_1a94f1f08e4f9def88aac03c33566d14a7" kindref="member">d</ref>(_d)<sp/>{}</highlight></codeline>
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-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>X<sp/>xix(xx<sp/>-<sp/><ref refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" kindref="member">x</ref>);</highlight></codeline>
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-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148" refid="class_cspline_1_1_element_1ad543a799407dc088f23fc39d0dd50cc8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cspline_1_1_element_1ad543a799407dc088f23fc39d0dd50cc8" kindref="member">operator&lt;</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_cspline_1_1_element" kindref="compound">Element</ref>&amp;<sp/>e)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" kindref="member">x</ref><sp/>&lt;<sp/>e.<ref refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" kindref="member">x</ref>;</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" kindref="member">x</ref><sp/>&lt;<sp/>xx;</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="158" refid="class_cspline_1a3c46eab83a7860156a3c88e9a6066203" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/><ref refid="class_cspline_1_1_element" kindref="compound">Element</ref><sp/><ref refid="class_cspline_1a3c46eab83a7860156a3c88e9a6066203" kindref="member">element_type</ref>;</highlight></codeline>
-<codeline lineno="159" refid="class_cspline_1ae15b871aeb0f0e4485237f5946a80f78" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;element_type&gt;<sp/><ref refid="class_cspline_1ae15b871aeb0f0e4485237f5946a80f78" kindref="member">elems</ref>;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162"><highlight class="normal"></highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/Cspline.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_cube_8_h.xml b/doxyxml/_cube_8_h.xml
deleted file mode 100644
index 2c11e87..0000000
--- a/doxyxml/_cube_8_h.xml
+++ /dev/null
@@ -1,322 +0,0 @@
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-    <includes local="no">unsupported/Eigen/CXX11/Tensor</includes>
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-      <node id="12">
-        <label>list</label>
-      </node>
-      <node id="13">
-        <label>map</label>
-      </node>
-      <node id="14">
-        <label>memory</label>
-      </node>
-      <node id="5">
-        <label>set</label>
-      </node>
-      <node id="4">
-        <label>string</label>
-      </node>
-      <node id="7">
-        <label>unsupported/Eigen/CXX11/Tensor</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-      <node id="15">
-        <label>yaml-cpp/yaml.h</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_cube" prot="public">Cube</innerclass>
-    <innerclass refid="class_cube_1_1exe_timer" prot="private">Cube::exeTimer</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Cube_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Cube_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;complex&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;set&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;unsupported/Eigen/CXX11/Tensor&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Coefficients.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_pot_accel_8_h" kindref="compound">PotAccel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;thrust/complex.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaParticle.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaMappingConstants.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_cube" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cube" kindref="compound">Cube</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel" kindref="compound">PotAccel</ref></highlight></codeline>
-<codeline lineno="23"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" kindref="member">coefType</ref><sp/>=<sp/>Eigen::Tensor&lt;std::complex&lt;double&gt;,<sp/>3&gt;;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_cube_1adb1e1b037b2b5209bfef71b5949aba98" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;coefType&gt;<sp/><ref refid="class_cube_1adb1e1b037b2b5209bfef71b5949aba98" kindref="member">expcoef</ref>,<sp/><ref refid="class_cube_1a170ce6cbd756a9102cb759cb50b30024" kindref="member">expcoefP</ref>;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_cube_1a2cd78e3d60cfc5cedd8586dacd8a1705" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a2cd78e3d60cfc5cedd8586dacd8a1705" kindref="member">imx</ref>,<sp/><ref refid="class_cube_1a436392598e00a0ebadfc47c7b5db0af2" kindref="member">imy</ref>,<sp/><ref refid="class_cube_1a3c009587307aec93ec80154f80c115db" kindref="member">imz</ref>,<sp/><ref refid="class_cube_1a068cd3dac6557341ed528b0c7420b314" kindref="member">osize</ref>;</highlight></codeline>
-<codeline lineno="36" refid="class_cube_1a0fa11ac46e1eb6cdb946d26dd8617cca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a81c93879fae311863874fc1cb419d43f" kindref="member">use1</ref>,<sp/><ref refid="class_cube_1a0fa11ac46e1eb6cdb946d26dd8617cca" kindref="member">use0</ref>;</highlight></codeline>
-<codeline lineno="37" refid="class_cube_1a1c8a7a7aeb99d41dc2e5142534ba5196" refkind="member"><highlight class="normal"><sp/><sp/>std::complex&lt;double&gt;<sp/><ref refid="class_cube_1a1c8a7a7aeb99d41dc2e5142534ba5196" kindref="member">kfac</ref>;</highlight></codeline>
-<codeline lineno="38" refid="class_cube_1ac6bf2eb17382cbb151e7e4ffa7bcccd2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><sp/><ref refid="class_cube_1ac6bf2eb17382cbb151e7e4ffa7bcccd2" kindref="member">dfac</ref>;</highlight></codeline>
-<codeline lineno="40"></codeline>
-<codeline lineno="42" refid="class_cube_1ad8775386b95dbf5ea4cb6995d69df1aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_cube_1ad8775386b95dbf5ea4cb6995d69df1aa" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_coefficients_cuda();</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_acceleration_cuda();</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>multistep_update_cuda();</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/>thrust::host_vector&lt;thrust::complex&lt;cuFP_t&gt;&gt;<sp/>host_coefs;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;thrust::complex&lt;cuFP_t&gt;&gt;<sp/>dev_coefs;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>HtoD_coefs();</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>DtoH_coefs(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>initialize_constants();</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>destroy_cuda();</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal">cudaStorage</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;thrust::complex&lt;cuFP_t&gt;&gt;<sp/>dN_coef;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;thrust::complex&lt;cuFP_t&gt;&gt;<sp/>dc_coef;</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;thrust::complex&lt;cuFP_t&gt;&gt;<sp/>dw_coef;</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;thrust::complex&lt;cuFP_t&gt;&gt;<sp/>df_coef;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>resize_coefs(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>osize,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>gridSize,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>stride);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/>cudaStorage<sp/>cuS;</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>initialize_cuda_cube;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_initialize();</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_zero_coefs();</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_cube_1a4cecb0c2cf57731c90a85233bcc55501" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a4cecb0c2cf57731c90a85233bcc55501" kindref="member">byPlanes</ref>;</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="class_cube_1a1952c8a09a2ce4e3c0a576705e52330c" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_cube_1a1952c8a09a2ce4e3c0a576705e52330c" kindref="member">cuMethod</ref>;</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_cube_1_1exe_timer" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cube_1_1exe_timer" kindref="compound">exeTimer</ref></highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="102" refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cube" kindref="compound">Cube</ref><sp/>*<sp/><ref refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" kindref="member">c</ref>;</highlight></codeline>
-<codeline lineno="103" refid="class_cube_1_1exe_timer_1ae5447a56086a32e3f0c17443ad03ee62" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_cube_1_1exe_timer_1ae5447a56086a32e3f0c17443ad03ee62" kindref="member">routine</ref>;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/>std::chrono::high_resolution_clock::time_point</highlight></codeline>
-<codeline lineno="105" refid="class_cube_1_1exe_timer_1ac54d024847fbbfad3cfc98b9b61d65f8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cube_1_1exe_timer_1a65f0d33b3297fc7d72a2e7cd62d95329" kindref="member">start0</ref>,<sp/><ref refid="class_cube_1_1exe_timer_1a3db6c8cb1caefed4d49908b951d576e3" kindref="member">start1</ref>,<sp/><ref refid="class_cube_1_1exe_timer_1ac54d024847fbbfad3cfc98b9b61d65f8" kindref="member">finish0</ref>,<sp/><ref refid="class_cube_1_1exe_timer_1ac02cd3123cf78ad4d0d01dfa73999490" kindref="member">finish1</ref>;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109" refid="class_cube_1_1exe_timer_1a71bc0c181bc3ca2fc336af81e6cd7485" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cube_1_1exe_timer_1a71bc0c181bc3ca2fc336af81e6cd7485" kindref="member">exeTimer</ref>(<ref refid="class_cube" kindref="compound">Cube</ref>*<sp/><ref refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" kindref="member">c</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name)<sp/>:<sp/><ref refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" kindref="member">c</ref>(<ref refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" kindref="member">c</ref>),<sp/><ref refid="class_cube_1_1exe_timer_1ae5447a56086a32e3f0c17443ad03ee62" kindref="member">routine</ref>(name)</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cube_1_1exe_timer_1a65f0d33b3297fc7d72a2e7cd62d95329" kindref="member">start0</ref><sp/>=<sp/>std::chrono::high_resolution_clock::now();</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_cube_1_1exe_timer_1a8bed7415b7e9474ebc72e49959700b67" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1_1exe_timer_1a8bed7415b7e9474ebc72e49959700b67" kindref="member">Start1</ref>()</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cube_1_1exe_timer_1a3db6c8cb1caefed4d49908b951d576e3" kindref="member">start1</ref><sp/><sp/>=<sp/>std::chrono::high_resolution_clock::now();</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="119" refid="class_cube_1_1exe_timer_1a298d580d7263eaf66d9b16715ee8da4e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1_1exe_timer_1a298d580d7263eaf66d9b16715ee8da4e" kindref="member">Stop1</ref>()</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cube_1_1exe_timer_1ac02cd3123cf78ad4d0d01dfa73999490" kindref="member">finish1</ref><sp/><sp/>=<sp/>std::chrono::high_resolution_clock::now();</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="124" refid="class_cube_1_1exe_timer_1a6a72d798de758a187cdc1efe342cf444" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cube_1_1exe_timer_1a6a72d798de758a187cdc1efe342cf444" kindref="member">~exeTimer</ref>()</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" kindref="member">c</ref>-&gt;<ref refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" kindref="member">component</ref>-&gt;<ref refid="class_component_1aa298ed953eaeb6430159adae676173f5" kindref="member">timers</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cube_1_1exe_timer_1ac54d024847fbbfad3cfc98b9b61d65f8" kindref="member">finish0</ref><sp/>=<sp/>std::chrono::high_resolution_clock::now();</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::chrono::duration&lt;double&gt;<sp/>duration0<sp/>=<sp/><ref refid="class_cube_1_1exe_timer_1ac54d024847fbbfad3cfc98b9b61d65f8" kindref="member">finish0</ref><sp/>-<sp/><ref refid="class_cube_1_1exe_timer_1a65f0d33b3297fc7d72a2e7cd62d95329" kindref="member">start0</ref>;</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::chrono::duration&lt;double&gt;<sp/>duration1<sp/>=<sp/><ref refid="class_cube_1_1exe_timer_1ac02cd3123cf78ad4d0d01dfa73999490" kindref="member">finish1</ref><sp/>-<sp/><ref refid="class_cube_1_1exe_timer_1a3db6c8cb1caefed4d49908b951d576e3" kindref="member">start1</ref>;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;=&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;==<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_cube_1_1exe_timer_1ae5447a56086a32e3f0c17443ad03ee62" kindref="member">routine</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>evaluation<sp/>[Cube::&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" kindref="member">c</ref>-&gt;<ref refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" kindref="member">cC</ref>-&gt;<ref refid="class_component_1a46343549452bda5ee9752f7a9bc15efb" kindref="member">name</ref></highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;]<sp/>level=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" kindref="member">c</ref>-&gt;<ref refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" kindref="member">mlevel</ref><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;=&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Time<sp/>in<sp/>CPU:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>duration0.count()-duration1.count()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cube_1_1exe_timer_1a8ee9c2b5b0033d0663b3a3358d142478" kindref="member">c</ref>-&gt;<ref refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" kindref="member">cC</ref>-&gt;cudaDevice&gt;=0)<sp/>{</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Time<sp/>in<sp/>GPU:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>duration1.count()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;=&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="152" refid="class_cube_1a0a8bd4c474818c42bb797035d86ac553" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a0a8bd4c474818c42bb797035d86ac553" kindref="member">compute_multistep_coefficients</ref>();</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"></highlight></codeline>
-<codeline lineno="155"></codeline>
-<codeline lineno="156" refid="class_cube_1aa78d482c8b6a1fe126851f734541d977" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;coefType&gt;<sp/>&gt;<sp/><ref refid="class_cube_1aa78d482c8b6a1fe126851f734541d977" kindref="member">differ1</ref>;</highlight></codeline>
-<codeline lineno="157" refid="class_cube_1a18041085eb33036c41e1fe0e11bd940a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::complex&lt;double&gt;<sp/>&gt;<sp/><ref refid="class_cube_1a18041085eb33036c41e1fe0e11bd940a" kindref="member">pack</ref>,<sp/><ref refid="class_cube_1a26c844f3663104af25a4489fc85da63d" kindref="member">unpack</ref>;</highlight></codeline>
-<codeline lineno="159"></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_cube_1ab742d871c9099dec61532a45fca95c76" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_cube_1ab742d871c9099dec61532a45fca95c76" kindref="member">coefTypePtr</ref><sp/>=<sp/>std::shared_ptr&lt;coefType&gt;;</highlight></codeline>
-<codeline lineno="163" refid="class_cube_1a400e9540de9a77489f86adf61089a726" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;coefTypePtr&gt;<sp/><ref refid="class_cube_1a400e9540de9a77489f86adf61089a726" kindref="member">expcoefN</ref>;</highlight></codeline>
-<codeline lineno="164" refid="class_cube_1a998df89b8e78ad060a8d8db6ca14436a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;coefTypePtr&gt;<sp/><ref refid="class_cube_1a998df89b8e78ad060a8d8db6ca14436a" kindref="member">expcoefL</ref>;</highlight></codeline>
-<codeline lineno="166"></codeline>
-<codeline lineno="172" refid="class_cube_1a53955c4fa1ad731cc63b614db11b51ec" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a53955c4fa1ad731cc63b614db11b51ec" kindref="member">multistep_update_begin</ref>();</highlight></codeline>
-<codeline lineno="173" refid="class_cube_1a03b09ee07d08268915b8b451b92da758" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a03b09ee07d08268915b8b451b92da758" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>next,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="174" refid="class_cube_1ae914dcb2011835bb35b556b614c1aa8c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1ae914dcb2011835bb35b556b614c1aa8c" kindref="member">multistep_update_finish</ref>();</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"></highlight></codeline>
-<codeline lineno="177"><highlight class="normal"></highlight></codeline>
-<codeline lineno="179" refid="class_cube_1a4889dfcc0b07a325577d3a632ab167d3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a4889dfcc0b07a325577d3a632ab167d3" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="183"></codeline>
-<codeline lineno="184" refid="class_cube_1a8bb5e673c54cdd4e06f03e5ade58834b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a8bb5e673c54cdd4e06f03e5ade58834b" kindref="member">nmaxx</ref>,<sp/><ref refid="class_cube_1aa0e2b466612e4eb7cc4ee1d7d13f03cf" kindref="member">nmaxy</ref>,<sp/><ref refid="class_cube_1a093c4f102752c66a4d6324e7174ddfa7" kindref="member">nmaxz</ref>;</highlight></codeline>
-<codeline lineno="186"></codeline>
-<codeline lineno="188"></codeline>
-<codeline lineno="189" refid="class_cube_1aba2bbc797f9ff22d84b717020d2d453e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cube_1aba2bbc797f9ff22d84b717020d2d453e" kindref="member">nminx</ref>,<sp/><ref refid="class_cube_1ae65b9fa67c184819f59b2cbfd573d6da" kindref="member">nminy</ref>,<sp/><ref refid="class_cube_1afaac06a8562dc7ebca3cf369ec78aa29" kindref="member">nminz</ref>;</highlight></codeline>
-<codeline lineno="191"></codeline>
-<codeline lineno="193"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194" refid="class_cube_1a3defa1a8f6b8fe67fa353632c0c9635a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_cube_1a3defa1a8f6b8fe67fa353632c0c9635a" kindref="member">determine_coefficients_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="195" refid="class_cube_1aa2a95971c28f6143b7521bd0d2087662" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_cube_1aa2a95971c28f6143b7521bd0d2087662" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="197"></codeline>
-<codeline lineno="199" refid="class_cube_1ae2f7fd3450813c7533430a43a016cdf5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1ae2f7fd3450813c7533430a43a016cdf5" kindref="member">determine_acceleration_and_potential</ref>();</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
-<codeline lineno="202" refid="class_cube_1aa8c977869ddc1963a8256a08e7969541" refkind="member"><highlight class="normal"><sp/><sp/>CoefClasses::CubeCoefs<sp/><ref refid="class_cube_1aa8c977869ddc1963a8256a08e7969541" kindref="member">cubeCoefs</ref>;</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205" refid="class_cube_1a0006a93a3ebb09ca12697b2ad22342df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a0006a93a3ebb09ca12697b2ad22342df" kindref="member">swap_coefs</ref>(std::vector&lt;coefType&gt;&amp;<sp/>from,<sp/>std::vector&lt;coefType&gt;&amp;<sp/>to)</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(from.size()<sp/>!=<sp/>to.size())<sp/>{</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;swap_coefs:<sp/>size(from)=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>from.size()<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>!=<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;size(to)=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>to.size();</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"></highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;coefType&gt;<sp/>tmp(from);</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/>from<sp/>=<sp/>to;</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/>to<sp/><sp/><sp/>=<sp/>tmp;</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight></codeline>
-<codeline lineno="219"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"></highlight></codeline>
-<codeline lineno="223" refid="class_cube_1a2b54b44a2c8891108ccaf1cf456e1a1f" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_cube_1a2b54b44a2c8891108ccaf1cf456e1a1f" kindref="member">id</ref>;</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight></codeline>
-<codeline lineno="226" refid="class_cube_1aaa5cf11dc360df81d3ee631168853ade" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cube_1aaa5cf11dc360df81d3ee631168853ade" kindref="member">Cube</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight></codeline>
-<codeline lineno="229" refid="class_cube_1a600d629a60344171d18ae77b3fb43912" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a600d629a60344171d18ae77b3fb43912" kindref="member">~Cube</ref>();</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="232" refid="class_cube_1a6da6df3f255795b3e3765bc72af8ea76" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a6da6df3f255795b3e3765bc72af8ea76" kindref="member">determine_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235" refid="class_cube_1a8477225cbb41bff514d27192542d7155" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1a8477225cbb41bff514d27192542d7155" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*);</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"></highlight></codeline>
-<codeline lineno="238" refid="class_cube_1ad41166930efa0c9005e1190ea95c98e0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cube_1ad41166930efa0c9005e1190ea95c98e0" kindref="member">dump_coefs_h5</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="239"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="normal"></highlight></codeline>
-<codeline lineno="242"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/Cube.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_cyl_disk_8_h.xml b/doxyxml/_cyl_disk_8_h.xml
deleted file mode 100644
index 798337c..0000000
--- a/doxyxml/_cyl_disk_8_h.xml
+++ /dev/null
@@ -1,424 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_cyl_disk_8_h" kind="file" language="C++">
-    <compoundname>CylDisk.H</compoundname>
-    <includes refid="massmodel_8_h" local="yes">massmodel.H</includes>
-    <includes refid="_emp_cyl_s_l_8_h" local="yes">EmpCylSL.H</includes>
-    <includes refid="interp_8_h" local="yes">interp.H</includes>
-    <incdepgraph>
-      <node id="20">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="21">
-        <label>EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
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-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="26">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
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-        <childnode refid="2" relation="include">
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-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="28">
-        <label>SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
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-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
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-        <childnode refid="32" relation="include">
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-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="35" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-      </node>
-      <node id="24">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="37">
-        <label>coef.H</label>
-        <link refid="include_2coef_8_h"/>
-      </node>
-      <node id="14">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="36">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-      </node>
-      <node id="32">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="34">
-        <label>sltableMP2.H</label>
-        <link refid="sltable_m_p2_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H</label>
-        <link refid="_cyl_disk_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="25">
-        <label>chrono</label>
-      </node>
-      <node id="23">
-        <label>cmath</label>
-      </node>
-      <node id="33">
-        <label>config_exp.h</label>
-      </node>
-      <node id="18">
-        <label>cstdlib</label>
-      </node>
-      <node id="8">
-        <label>deque</label>
-      </node>
-      <node id="30">
-        <label>fstream</label>
-      </node>
-      <node id="13">
-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
-      </node>
-      <node id="15">
-        <label>iostream</label>
-      </node>
-      <node id="22">
-        <label>limits</label>
-      </node>
-      <node id="10">
-        <label>map</label>
-      </node>
-      <node id="29">
-        <label>math.h</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="31">
-        <label>mpi.h</label>
-      </node>
-      <node id="5">
-        <label>random</label>
-      </node>
-      <node id="17">
-        <label>sstream</label>
-      </node>
-      <node id="11">
-        <label>string</label>
-      </node>
-      <node id="27">
-        <label>unordered_map</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-      <node id="35">
-        <label>yaml-cpp/yaml.h</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_cyl_disk" prot="public">CylDisk</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>This<sp/>is<sp/>-*-<sp/>C++<sp/>-*-</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Two<sp/>dimensional<sp/>disk<sp/>from<sp/>Cylindrical<sp/>expansion</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_CylDisk_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_CylDisk_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&quot;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&quot;<ref refid="_emp_cyl_s_l_8_h" kindref="compound">EmpCylSL.H</ref>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&quot;<ref refid="interp_8_h" kindref="compound">interp.H</ref>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="class_cyl_disk" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cyl_disk" kindref="compound">CylDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="15"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="18" refid="class_cyl_disk_1ae3d1fa808b1fdf1a280e37a163cd9a39" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref><sp/>*<ref refid="class_cyl_disk_1ae3d1fa808b1fdf1a280e37a163cd9a39" kindref="member">d</ref>;</highlight></codeline>
-<codeline lineno="19" refid="class_cyl_disk_1a647a54ae7b8de7f60bc31a05daa6ba3a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a647a54ae7b8de7f60bc31a05daa6ba3a" kindref="member">setup_model</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a7c268fc3b7230eca1337d96438186c9c" kindref="member">rmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1ae58a1c9cc465a7b980b83cbadec2b366" kindref="member">rmax</ref>);</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" kindref="member">rlog</ref>;</highlight></codeline>
-<codeline lineno="22" refid="class_cyl_disk_1ab50bd04c5cc065a02bd416b7e8a12753" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>,<sp/><ref refid="class_cyl_disk_1ab50bd04c5cc065a02bd416b7e8a12753" kindref="member">dd</ref>,<sp/><ref refid="class_cyl_disk_1a5a00b733696c58f0929af0a377c1aca7" kindref="member">mm</ref>,<sp/><ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref>,<sp/><ref refid="class_cyl_disk_1a7c268fc3b7230eca1337d96438186c9c" kindref="member">rmin</ref>,<sp/><ref refid="class_cyl_disk_1ae58a1c9cc465a7b980b83cbadec2b366" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>radial<sp/>points<sp/>in<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" kindref="member">NUMR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>200</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Linear<sp/>(false)<sp/>or<sp/>logarithmic<sp/>(true)<sp/>mesh</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_cyl_disk_1a7cc9a87e8ee93e542068e4696b8877ea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a7cc9a87e8ee93e542068e4696b8877ea" kindref="member">RLOG</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>true</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_cyl_disk_1aa7f980839ab56946643178c66df0e964" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cyl_disk_1aa7f980839ab56946643178c66df0e964" kindref="member">CylDisk</ref>(<ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref><sp/>*D,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rmax)<sp/></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cyl_disk_1ae3d1fa808b1fdf1a280e37a163cd9a39" kindref="member">d</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>D;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;CylDisk&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cyl_disk_1a647a54ae7b8de7f60bc31a05daa6ba3a" kindref="member">setup_model</ref>(Rmin,<sp/>Rmax);</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_cyl_disk_1aea08fe9de8e203398ef0ac6e583b09cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1aea08fe9de8e203398ef0ac6e583b09cf" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R<sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" kindref="member">rlog</ref>)<sp/>R<sp/>=<sp/>log(r);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a72e302630a423bfa1c4bb0d0af8db14c" kindref="member">odd2</ref>(R,<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>,<sp/><ref refid="class_cyl_disk_1a5a00b733696c58f0929af0a377c1aca7" kindref="member">mm</ref>);</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_cyl_disk_1ae1834978ae1f35cccf035bde739a0100" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1ae1834978ae1f35cccf035bde739a0100" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R<sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" kindref="member">rlog</ref>)<sp/>R<sp/>=<sp/>log(r);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a72e302630a423bfa1c4bb0d0af8db14c" kindref="member">odd2</ref>(R,<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>,<sp/><ref refid="class_cyl_disk_1ab50bd04c5cc065a02bd416b7e8a12753" kindref="member">dd</ref>);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_cyl_disk_1a69c0c5c4932ea5a27a4035693f77e7c0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a69c0c5c4932ea5a27a4035693f77e7c0" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R<sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" kindref="member">rlog</ref>)<sp/>R<sp/>=<sp/>log(r);</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a72e302630a423bfa1c4bb0d0af8db14c" kindref="member">odd2</ref>(R,<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>,<sp/><ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68" refid="class_cyl_disk_1ad4ff5ae0adcc35a7e9326e87e48c43c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1ad4ff5ae0adcc35a7e9326e87e48c43c2" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R<sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" kindref="member">rlog</ref>)<sp/>R<sp/>=<sp/>log(r);</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1aff85f732fb51d39630aea9fc48cf5c9d" kindref="member">drv2</ref>(R,<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>,<sp/><ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R<sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" kindref="member">rlog</ref>)<sp/>R<sp/>=<sp/>log(r);</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>indx<sp/>=<sp/><ref refid="interp_8_h_1aef43f105ecadc0dd19c4be25d0398614" kindref="member">Vlocate</ref>(R,<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>);</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(indx<sp/>&gt;=<sp/><ref refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" kindref="member">NUMR</ref>-2)<sp/>indx<sp/>=<sp/><ref refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" kindref="member">NUMR</ref>-4;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(indx&gt;0)<sp/>indx--;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<sp/>(<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+3]<sp/>-<sp/>3.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+2]+<sp/>3.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+1]<sp/>-<sp/><ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx])*(R<sp/>-<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>[indx])</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>(<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+3]<sp/>-<sp/>4.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+2]+<sp/>5.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+1]<sp/>-<sp/>2.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx])*<ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref><sp/>)<sp/>/</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>(<ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref>*<ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref>*<ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref>);</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R<sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" kindref="member">rlog</ref>)<sp/>R<sp/>=<sp/>log(r);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/>ur<sp/><sp/>=<sp/><ref refid="interp_8_h_1aff85f732fb51d39630aea9fc48cf5c9d" kindref="member">drv2</ref>(R,<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>,<sp/><ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>);</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>indx<sp/>=<sp/><ref refid="interp_8_h_1aef43f105ecadc0dd19c4be25d0398614" kindref="member">Vlocate</ref>(R,<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>);</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(indx<sp/>&gt;=<sp/><ref refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" kindref="member">NUMR</ref>-2)<sp/>indx<sp/>=<sp/><ref refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" kindref="member">NUMR</ref>-4;</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(indx&gt;0)<sp/>indx--;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/>dur<sp/>=<sp/>(<sp/>(<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+3]<sp/>-<sp/>3.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+2]+<sp/>3.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+1]<sp/>-<sp/><ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx])*(R<sp/>-<sp/><ref refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" kindref="member">rr</ref>[indx])</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>(<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+3]<sp/>-<sp/>4.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+2]+<sp/>5.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx+1]<sp/>-<sp/>2.0*<ref refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" kindref="member">pp</ref>[indx])*<ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref><sp/>)<sp/>/</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>(<ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref>*<ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref>*<ref refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" kindref="member">dr</ref>);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103" refid="class_cyl_disk_1a0a7c0a769ddb247e134a4cf7197e992c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a0a7c0a769ddb247e134a4cf7197e992c" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a7c268fc3b7230eca1337d96438186c9c" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="107" refid="class_cyl_disk_1ac786069b5009aaba3c29d12044f1b4f1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1ac786069b5009aaba3c29d12044f1b4f1" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1ae58a1c9cc465a7b980b83cbadec2b366" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="class_cyl_disk_1ae9ef54bc692ed877ea1a6521eca9cf2e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1ae9ef54bc692ed877ea1a6521eca9cf2e" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117" refid="class_cyl_disk_1af0e30c235213217773f8d8267642b9e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1af0e30c235213217773f8d8267642b9e9" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122" refid="class_cyl_disk_1aa154476667df93960f11db39c913c5da" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1aa154476667df93960f11db39c913c5da" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="127" refid="class_cyl_disk_1a0da36c44b6817549006433de12916474" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cyl_disk_1a0da36c44b6817549006433de12916474" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="132"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_cyl_e_x_p_8_h.xml b/doxyxml/_cyl_e_x_p_8_h.xml
deleted file mode 100644
index 3f92968..0000000
--- a/doxyxml/_cyl_e_x_p_8_h.xml
+++ /dev/null
@@ -1,749 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_cyl_e_x_p_8_h" kind="file" language="C++">
-    <compoundname>CylEXP.H</compoundname>
-    <includes refid="global_8_h" local="no">global.H</includes>
-    <includes refid="expand_8_h" local="no">expand.H</includes>
-    <includes refid="_emp_cyl_s_l_8_h" local="no">EmpCylSL.H</includes>
-    <includedby refid="_cyl_two_d_8_h" local="no">/home/weinberg/Projects/EXP/src/CylTwoD.H</includedby>
-    <includedby refid="_cylinder_8_h" local="no">/home/weinberg/Projects/EXP/src/Cylinder.H</includedby>
-    <incdepgraph>
-      <node id="17">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="49">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="44" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-      </node>
-      <node id="53">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="68">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="65" relation="include">
-        </childnode>
-      </node>
-      <node id="37">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="56">
-        <label>EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="57" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="58" relation="include">
-        </childnode>
-        <childnode refid="59" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
-        </childnode>
-        <childnode refid="63" relation="include">
-        </childnode>
-        <childnode refid="70" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="60">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="61">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="62" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="43">
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-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_CylEXP_H</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaMappingConstants.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="28"></codeline>
-<codeline lineno="29" refid="class_cyl_e_x_p_1ae00f6b7ef25a22da2c227e5dba1035f3" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/>&gt;<sp/><ref refid="class_cyl_e_x_p_1a38a7bb25261a63caccc74fb3e0026259" kindref="member">differS1</ref>,<sp/><ref refid="class_cyl_e_x_p_1ae00f6b7ef25a22da2c227e5dba1035f3" kindref="member">differC1</ref>;</highlight></codeline>
-<codeline lineno="30" refid="class_cyl_e_x_p_1a371f94b590abfdd2c91f037c66e496f9" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_cyl_e_x_p_1a838e7c28aeedd42561589cc65ec4210f" kindref="member">workC1</ref>,<sp/><ref refid="class_cyl_e_x_p_1a371f94b590abfdd2c91f037c66e496f9" kindref="member">workC</ref>,<sp/><ref refid="class_cyl_e_x_p_1a6981dfcd5a2dad2d91a330fb85d2b0fa" kindref="member">workS1</ref>,<sp/><ref refid="class_cyl_e_x_p_1a2009aaf7329f3ed9d46366aca2b723f1" kindref="member">workS</ref>;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_cyl_e_x_p_1afac42c8400352832e29e7761b2358926" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cyl_e_x_p_1afac42c8400352832e29e7761b2358926" kindref="member">CylEXP</ref>()<sp/>:<sp/><ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_cyl_e_x_p_1a70ad0e8775057e132fc6be10827457b9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cyl_e_x_p_1a70ad0e8775057e132fc6be10827457b9" kindref="member">CylEXP</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numr,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nord,</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ascale,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>hscale,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a25e0bb43aff536fb91927ce3aa30c4e7" kindref="member">Nodd</ref>=-1,</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>cachename=</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_cyl_e_x_p_1a8dfeca51749f0a693c85c96ead4f612b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cyl_e_x_p_1a8dfeca51749f0a693c85c96ead4f612b" kindref="member">compute_multistep_coefficients</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>mlevel);</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_cyl_e_x_p_1a4d181f13890c08e680afa2fdf1dc1563" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cyl_e_x_p_1a4d181f13890c08e680afa2fdf1dc1563" kindref="member">multistep_update_begin</ref>();</highlight></codeline>
-<codeline lineno="75" refid="class_cyl_e_x_p_1a7fac2126384f18a75277e07831d9bc78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cyl_e_x_p_1a7fac2126384f18a75277e07831d9bc78" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>from,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>to,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e2a9a9df575f2d593769c1a7eccf1f8" kindref="member">r</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="76" refid="class_cyl_e_x_p_1ac2125193fb847b6d09947cf56f356550" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cyl_e_x_p_1ac2125193fb847b6d09947cf56f356550" kindref="member">multistep_update_finish</ref>();</highlight></codeline>
-<codeline lineno="77" refid="class_cyl_e_x_p_1a9b75afd20f0a3811a5574d8670d9ebe9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cyl_e_x_p_1a9b75afd20f0a3811a5574d8670d9ebe9" kindref="member">multistep_reset</ref>();</highlight></codeline>
-<codeline lineno="79"></codeline>
-<codeline lineno="81" refid="class_cyl_e_x_p_1ae6ddeb5cd8ba08c653a66c1bae0a79d9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cyl_e_x_p_1ae6ddeb5cd8ba08c653a66c1bae0a79d9" kindref="member">multistep_debug</ref>();</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight><highlight class="comment">//<sp/>-*-<sp/>C++<sp/>-*-</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/CylEXP.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_cyl_two_d_8_h.xml b/doxyxml/_cyl_two_d_8_h.xml
deleted file mode 100644
index ba7c989..0000000
--- a/doxyxml/_cyl_two_d_8_h.xml
+++ /dev/null
@@ -1,980 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_cyl_two_d_8_h" kind="file" language="C++">
-    <compoundname>CylTwoD.H</compoundname>
-    <includes local="no">memory</includes>
-    <includes refid="_orient_8_h" local="no">Orient.H</includes>
-    <includes refid="_basis_8_h" local="no">Basis.H</includes>
-    <includes refid="_cyl_e_x_p_8_h" local="no">CylEXP.H</includes>
-    <includes local="no">Coefficients.H</includes>
-    <includes local="no">config_exp.h</includes>
-    <includes refid="_n_v_t_x_8_h" local="no">NVTX.H</includes>
-    <includes local="no">CoefContainer.H</includes>
-    <incdepgraph>
-      <node id="38">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-      </node>
-      <node id="54">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="55">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="70">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="67" relation="include">
-        </childnode>
-      </node>
-      <node id="51">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-      </node>
-      <node id="58">
-        <label>EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="59" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="47" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="60" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="63" relation="include">
-        </childnode>
-        <childnode refid="65" relation="include">
-        </childnode>
-        <childnode refid="72" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-      </node>
-      <node id="62">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="63">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="64" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="69">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="67" relation="include">
-        </childnode>
-        <childnode refid="70" relation="include">
-        </childnode>
-        <childnode refid="68" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="65">
-        <label>SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
-        <childnode refid="66" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="67" relation="include">
-        </childnode>
-        <childnode refid="71" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-      </node>
-      <node id="42">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="26">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="39">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="27">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="72">
-        <label>coef.H</label>
-        <link refid="include_2coef_8_h"/>
-      </node>
-      <node id="8">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="60">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="52">
-        <label>header.H</label>
-        <link refid="header_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-      </node>
-      <node id="61">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="62" relation="include">
-        </childnode>
-      </node>
-      <node id="41">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-      </node>
-      <node id="40">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="67">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
-        </childnode>
-        <childnode refid="68" relation="include">
-        </childnode>
-        <childnode refid="69" relation="include">
-        </childnode>
-      </node>
-      <node id="68">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="59" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="60" relation="include">
-        </childnode>
-      </node>
-      <node id="71">
-        <label>sltableMP2.H</label>
-        <link refid="sltable_m_p2_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="18">
-        <label>Basis.H</label>
-        <link refid="_basis_8_h"/>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="49">
-        <label>Component.H</label>
-        <link refid="_component_8_h"/>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="50" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="51" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
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-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="52" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="53" relation="include">
-        </childnode>
-        <childnode refid="54" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="55" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="48">
-        <label>ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="49" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-      </node>
-      <node id="28">
-        <label>CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="43" relation="include">
-        </childnode>
-        <childnode refid="58" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
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-        </childnode>
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-        </childnode>
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-        </childnode>
-        <childnode refid="74" relation="include">
-        </childnode>
-        <childnode refid="75" relation="include">
-        </childnode>
-      </node>
-      <node id="56">
-        <label>ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="49" relation="include">
-        </childnode>
-      </node>
-      <node id="74">
-        <label>NVTX.H</label>
-        <link refid="_n_v_t_x_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Orient.H</label>
-        <link refid="_orient_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
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-        </childnode>
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-        </childnode>
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-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="57">
-        <label>Output.H</label>
-        <link refid="_output_8_h"/>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="50" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-      </node>
-      <node id="53">
-        <label>ParticleFerry.H</label>
-        <link refid="_particle_ferry_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="34">
-        <label>chkTimer.H</label>
-        <link refid="chk_timer_8_h"/>
-        <childnode refid="35" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="33">
-        <label>coef.H</label>
-        <link refid="src_2coef_8_h"/>
-      </node>
-      <node id="43">
-        <label>expand.H</label>
-        <link refid="expand_8_h"/>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="44" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="45" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="47" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="48" relation="include">
-        </childnode>
-        <childnode refid="56" relation="include">
-        </childnode>
-        <childnode refid="57" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="51" relation="include">
-        </childnode>
-      </node>
-      <node id="29">
-        <label>global.H</label>
-        <link refid="global_8_h"/>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-      </node>
-      <node id="75">
-        <label>CoefContainer.H</label>
-      </node>
-      <node id="73">
-        <label>Coefficients.H</label>
-      </node>
-      <node id="9">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="10">
-        <label>Particle.H</label>
-      </node>
-      <node id="7">
-        <label>algorithm</label>
-      </node>
-      <node id="12">
-        <label>array</label>
-      </node>
-      <node id="22">
-        <label>chrono</label>
-      </node>
-      <node id="36">
-        <label>cmath</label>
-      </node>
-      <node id="17">
-        <label>config_exp.h</label>
-      </node>
-      <node id="20">
-        <label>cstdlib</label>
-      </node>
-      <node id="45">
-        <label>cstring</label>
-      </node>
-      <node id="6">
-        <label>deque</label>
-      </node>
-      <node id="37">
-        <label>fstream</label>
-      </node>
-      <node id="59">
-        <label>functional</label>
-      </node>
-      <node id="15">
-        <label>iomanip</label>
-      </node>
-      <node id="14">
-        <label>iostream</label>
-      </node>
-      <node id="47">
-        <label>limits</label>
-      </node>
-      <node id="23">
-        <label>list</label>
-      </node>
-      <node id="24">
-        <label>map</label>
-      </node>
-      <node id="66">
-        <label>math.h</label>
-      </node>
-      <node id="2">
-        <label>memory</label>
-      </node>
-      <node id="31">
-        <label>mpi.h</label>
-      </node>
-      <node id="30">
-        <label>pthread.h</label>
-      </node>
-      <node id="32">
-        <label>random</label>
-      </node>
-      <node id="5">
-        <label>set</label>
-      </node>
-      <node id="46">
-        <label>sstream</label>
-      </node>
-      <node id="44">
-        <label>stdexcept</label>
-      </node>
-      <node id="21">
-        <label>string</label>
-      </node>
-      <node id="35">
-        <label>time.h</label>
-      </node>
-      <node id="16">
-        <label>tuple</label>
-      </node>
-      <node id="64">
-        <label>unordered_map</label>
-      </node>
-      <node id="50">
-        <label>utility</label>
-      </node>
-      <node id="4">
-        <label>vector</label>
-      </node>
-      <node id="25">
-        <label>yaml-cpp/yaml.h</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_cylinder" prot="public">Cylinder</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_TwoDCyl_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_TwoDCyl_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_orient_8_h" kindref="compound">Orient.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_basis_8_h" kindref="compound">Basis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_cyl_e_x_p_8_h" kindref="compound">CylEXP.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Coefficients.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaParticle.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaMappingConstants.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_n_v_t_x_8_h" kindref="compound">NVTX.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;CoefContainer.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref>;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="110"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="115"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a9c5152a2d3c9f1303edbd4583e852bf7" kindref="member">ashift</ref>;</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a262f89ac08cdc97a4ffc86cf4ae12f6b" kindref="member">vflag</ref>;</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CylEXP&gt;<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>;</highlight></codeline>
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-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="123"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_cylinder_1acee994bfceda72c9a713300bbe384a1e" kindref="member">cylmass0</ref>;</highlight></codeline>
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-<codeline lineno="126"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="135"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_cylinder_1aea8a8e1986913f71961bf3164e5f59ba" kindref="member">cachename</ref>;</highlight></codeline>
-<codeline lineno="136" refid="class_cylinder_1aaf9d897ba34c9679899680e239793d57" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" kindref="member">self_consistent</ref>,<sp/><ref refid="class_cylinder_1a34b887a9b700e9bb529dc2990c97e6d0" kindref="member">logarithmic</ref>,<sp/><ref refid="class_cylinder_1aaf9d897ba34c9679899680e239793d57" kindref="member">density</ref>,<sp/><ref refid="class_cylinder_1a998a906122544ef609d64315e29ac010" kindref="member">pcavar</ref>,<sp/><ref refid="class_cylinder_1a7cde3e9c2a02333f1da31e2ea5a23815" kindref="member">pcainit</ref>,<sp/><ref refid="class_cylinder_1afdc928a1a1e6aa7ed2f05543379d89d2" kindref="member">pcavtk</ref>,<sp/><ref refid="class_cylinder_1a18dfd51d53a7b42743201ebea8791dd7" kindref="member">pcadiag</ref>,<sp/><ref refid="class_cylinder_1a5223e5b265f66daf43f40e9e9e7800c1" kindref="member">pcaeof</ref>,<sp/><ref refid="class_cylinder_1a548c38dfaeb2146c30823d9d8011450e" kindref="member">eof_over</ref>;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1abba13fc273f5810d1235db57cde60a67" kindref="member">try_cache</ref>,<sp/><ref refid="class_cylinder_1a7a8b54489da5644c1270b6d37ba21c0d" kindref="member">firstime</ref>,<sp/><ref refid="class_cylinder_1a2cc4974e868067cd4ec3124c5b335361" kindref="member">dump_basis</ref>,<sp/><ref refid="class_cylinder_1a408307e5a429e0ba50cbd0b1aa55bd7f" kindref="member">compute</ref>,<sp/><ref refid="class_cylinder_1a17fbe3eb1e8a1070e5f957883591847f" kindref="member">firstime_coef</ref>;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>These<sp/>should<sp/>be<sp/>ok<sp/>for<sp/>all<sp/>derived<sp/>classes,<sp/>hence<sp/>declared<sp/>private</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="class_cylinder_1a31fffadf7f868525edeb6b561357f8bd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a31fffadf7f868525edeb6b561357f8bd" kindref="member">determine_coefficients</ref>();</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="143" refid="class_cylinder_1a84c2eeb8f441c58f78512edf8d5a3f98" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a84c2eeb8f441c58f78512edf8d5a3f98" kindref="member">determine_coefficients_playback</ref>();</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145" refid="class_cylinder_1a9fa4938d576706cd9f654975fdc34f7e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a9fa4938d576706cd9f654975fdc34f7e" kindref="member">determine_coefficients_particles</ref>();</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147" refid="class_cylinder_1a48b39d1e3e02f172018bccc4dd8ad842" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a48b39d1e3e02f172018bccc4dd8ad842" kindref="member">determine_coefficients_eof</ref>();</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="149" refid="class_cylinder_1a2052d5c8fe1589f91215058ebd72ec2a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a2052d5c8fe1589f91215058ebd72ec2a" kindref="member">determine_acceleration_and_potential</ref>();</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151" refid="class_cylinder_1a2362b4060aa3fb06b5b8de448ae61f81" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_cylinder_1a2362b4060aa3fb06b5b8de448ae61f81" kindref="member">determine_coefficients_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153" refid="class_cylinder_1a7833c07ea8eeb02353c696114de18fbc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_cylinder_1a7833c07ea8eeb02353c696114de18fbc" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" kindref="member">compute_multistep_coefficients</ref>()<sp/></highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" kindref="member">play_back</ref><sp/>and<sp/>not<sp/><ref refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" kindref="member">play_cnew</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="_n_v_t_x_8_h_1a31a371410753045ab3817221bb7f609b" kindref="member">nvTracerPtr</ref><sp/>tPtr;</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="global_8_h_1ae5fcffdfa527121d2b3f80644536edbd" kindref="member">cuda_prof</ref>)</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>tPtr<sp/>=<sp/><ref refid="_n_v_t_x_8_h_1a31a371410753045ab3817221bb7f609b" kindref="member">nvTracerPtr</ref>(</highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/><ref refid="classnv_tracer" kindref="compound">nvTracer</ref>(</highlight><highlight class="stringliteral">&quot;Cylinder::compute_multistep_coefficients&quot;</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;compute_multistep_coefficients(<ref refid="global_8_h_1ae68076dadfc8e0ee051559218f8a16aa" kindref="member">mfirst</ref>[<ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>]);</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight></codeline>
-<codeline lineno="170" refid="class_cylinder_1a4ccd3920ba81aabc5051840b7c0d5875" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a4ccd3920ba81aabc5051840b7c0d5875" kindref="member">multistep_reset</ref>();</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"></highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref><sp/>*<ref refid="class_cylinder_1aa04955a71bc38bd5073ac88c728ed33b" kindref="member">mix</ref>;</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight></codeline>
-<codeline lineno="176" refid="class_cylinder_1a301c653a9d52036222cc9e80d75ef5df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a301c653a9d52036222cc9e80d75ef5df" kindref="member">compute_grid_mass</ref>();</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"></highlight></codeline>
-<codeline lineno="178"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1abee587361c163c331bd1ddce15772554" kindref="member">sampT</ref>,<sp/><ref refid="class_cylinder_1a9c9f2064fd2e562d144da4dfab80a274" kindref="member">defSampT</ref>;</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"></highlight></codeline>
-<codeline lineno="184"><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_coefficients_cuda(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute_pca);</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_acceleration_cuda();</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>multistep_update_cuda();</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"></highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/>thrust::host_vector<sp/><sp/>&lt;cuFP_t&gt;<sp/>host_coefs,<sp/>host_covar,<sp/>host_massT;</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dev_coefs;</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/>std::vector&lt;thrust::host_vector&lt;cuFP_t&gt;&gt;<sp/>host_coefsT,<sp/>host_covarT;</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>HtoD_coefs();</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>DtoH_coefs(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" kindref="member">mlevel</ref>);</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/>std::vector&lt;cudaArray_t&gt;<sp/>cuInterpArray;</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/>thrust::host_vector&lt;cudaTextureObject_t&gt;<sp/>tex;</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>initialize_cuda_cyl;</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>()</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1abee587361c163c331bd1ddce15772554" kindref="member">sampT</ref><sp/>=<sp/>floor(sqrt(<ref refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" kindref="member">component</ref>-&gt;<ref refid="class_component_1a19a8ac34f26702235706c33b9161e31e" kindref="member">CurTotal</ref>()));</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;initialize_cuda(cuInterpArray,<sp/>tex);</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;getCudaMappingConstants();</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"></highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>destroy_cuda();</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"></highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>initialize_mapping_constants();</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>host_dev_force_compare();</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;cudaTextureObject_t&gt;<sp/>t_d;</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal">cudaStorage</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dN_coef;</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dc_coef;</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dw_coef;</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>df_coef;</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>X_d,<sp/>Y_d,<sp/>m_d,<sp/>u_d,<sp/>p_d;</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;int<sp/><sp/><sp/>&gt;<sp/>iX_d,<sp/>iY_d;</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;thrust::device_vector&lt;cuFP_t&gt;&gt;<sp/>T_covr;</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dN_tvar;</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dW_tvar;</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dc_tvar;</highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dw_tvar;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>df_tvar;</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>resize_coefs(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ncylorder,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>gridSize,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>stride,</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sampT,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>pcavar,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>pcaeof,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>subsamp);</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="244"><highlight class="normal"></highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/>cudaStorage<sp/>cuS;</highlight></codeline>
-<codeline lineno="247"><highlight class="normal"></highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_initialize();</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"></highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_zero_coefs();</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255"><highlight class="normal"></highlight></codeline>
-<codeline lineno="256"><highlight class="normal"></highlight></codeline>
-<codeline lineno="257"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="258"><highlight class="normal"></highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CoefClasses::CylCoefs&gt;<sp/><ref refid="class_cylinder_1a8221adf2f7752878029457315306b6d3" kindref="member">playback</ref>;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"></highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a82abc17e0b1611dd2879b108a1f12b6d" kindref="member">coefMaster</ref>;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"></highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a6be0605baa5de43ff2578d2870818ac7" kindref="member">lastPlayTime</ref>;</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"></highlight></codeline>
-<codeline lineno="276"><highlight class="normal"><sp/><sp/>Eigen::MatrixXcd<sp/><ref refid="class_cylinder_1a101160d0f44fbe28d1aa349338a6915f" kindref="member">P</ref>,<sp/><ref refid="class_cylinder_1ab42b1b72eff2c9aca1fc2b4ba97ca968" kindref="member">P1</ref>;</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"></highlight></codeline>
-<codeline lineno="279" refid="class_cylinder_1a07457e19eb28e7c4b204e26d31c1b267" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a07457e19eb28e7c4b204e26d31c1b267" kindref="member">getCoefs</ref>(Eigen::MatrixXcd&amp;<sp/>C)</highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>cosV(C.cols()),<sp/>sinV(C.cols());</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m=0;<sp/>m&lt;=<ref refid="class_cylinder_1a12ec434b1c079bf422d74f09034177a2" kindref="member">mmax</ref>;<sp/>m++)<sp/>{</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;get_coefs(m,<sp/>cosV,<sp/>sinV);</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>C.row(m).real()<sp/>=<sp/>cosV;</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>C.row(m).imag()<sp/>=<sp/>sinV;</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"></highlight></codeline>
-<codeline lineno="290" refid="class_cylinder_1a717a3d56d06af595e0ed1fe364b2525b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a717a3d56d06af595e0ed1fe364b2525b" kindref="member">setCoefs</ref>(Eigen::MatrixXcd&amp;<sp/>C)</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m=0;<sp/>m&lt;=<ref refid="class_cylinder_1a12ec434b1c079bf422d74f09034177a2" kindref="member">mmax</ref>;<sp/>m++)<sp/>{</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>zero<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m==0)<sp/>zero<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_coefs(m,<sp/>C.row(m).real(),<sp/>C.row(m).imag(),<sp/>zero);</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"></highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/>CoefClasses::CylCoefs<sp/><ref refid="class_cylinder_1a536f1961a271262c6c73a2cd8b074eab" kindref="member">cylCoefs</ref>;</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"></highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_cylinder_1a9a3ad9c738c98c33c997fd74ca3872ee" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"></highlight></codeline>
-<codeline lineno="305"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight></codeline>
-<codeline lineno="308"></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>pthread_mutex_t<sp/><ref refid="class_cylinder_1a9997b96fd22bf7f5d9990cb5dbfdcfb9" kindref="member">used_lock</ref>,<sp/><ref refid="class_cylinder_1a939689b3e2921594c2088dd443dbdcd1" kindref="member">cos_coef_lock</ref>,<sp/><ref refid="class_cylinder_1ac4604b06d6359a220b903dd5b5ef05b3" kindref="member">sin_coef_lock</ref>;</highlight></codeline>
-<codeline lineno="311"></codeline>
-<codeline lineno="352" refid="class_cylinder_1a32f6f757b5d7f130a7a3582077ff990a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a32f6f757b5d7f130a7a3582077ff990a" kindref="member">Cylinder</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>,<sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref><sp/>*m=0);</highlight></codeline>
-<codeline lineno="353"><highlight class="normal"></highlight></codeline>
-<codeline lineno="355" refid="class_cylinder_1a62b974fc969958cc05fa7d72cb5a4395" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a62b974fc969958cc05fa7d72cb5a4395" kindref="member">~Cylinder</ref>();</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="358" refid="class_cylinder_1a7eedc780551196e17ce0949acf5c951c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a7eedc780551196e17ce0949acf5c951c" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*);</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"></highlight></codeline>
-<codeline lineno="361"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="362" refid="class_cylinder_1a021dbbef8f761e75fef8f25316bb71c8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a021dbbef8f761e75fef8f25316bb71c8" kindref="member">determine_fields_at_point_sph</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>theta,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpott,<sp/></highlight></codeline>
-<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp);</highlight></codeline>
-<codeline lineno="367"><highlight class="normal"></highlight></codeline>
-<codeline lineno="369"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="370" refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1" kindref="member">determine_fields_at_point_cyl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz,<sp/></highlight></codeline>
-<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp);</highlight></codeline>
-<codeline lineno="375"><highlight class="normal"></highlight></codeline>
-<codeline lineno="377"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="378" refid="class_cylinder_1a93e53590d9d96600f1a761723130dbc0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a93e53590d9d96600f1a761723130dbc0" kindref="member">determine_fields_at_point_cyl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz,<sp/></highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmin,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a9234ee393feef01aad1ca212f09cd79d" kindref="member">mlim</ref>)</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>MMIN=-1,<sp/>MLIM=-1;</highlight></codeline>
-<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Set<sp/>new<sp/>values<sp/>and<sp/>cache<sp/>current<sp/>values</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(mmin&gt;=0)<sp/>{</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>MMIN<sp/>=<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;get_mmin();</highlight></codeline>
-<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_mmin(mmin);</highlight></codeline>
-<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cylinder_1a9234ee393feef01aad1ca212f09cd79d" kindref="member">mlim</ref>&gt;=0)<sp/>{</highlight></codeline>
-<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>MLIM<sp/>=<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;get_mlim();</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_mlim(<ref refid="class_cylinder_1a9234ee393feef01aad1ca212f09cd79d" kindref="member">mlim</ref>);</highlight></codeline>
-<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"></highlight></codeline>
-<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1" kindref="member">determine_fields_at_point_cyl</ref>(r,<sp/>z,<sp/>phi,</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tdens0,<sp/>tpotl0,<sp/>tdens,<sp/>tpotl,<sp/></highlight></codeline>
-<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tpotr,<sp/>tpotz,<sp/>tpotp);</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight></codeline>
-<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Reset<sp/>limits<sp/>to<sp/>original<sp/>values</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(MMIN&gt;=0)<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_mmin(MMIN);</highlight></codeline>
-<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(MLIM&gt;=0)<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_mlim(MLIM);</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"></highlight></codeline>
-<codeline lineno="405"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="406" refid="class_cylinder_1a4cffcad313069e21b01a648d656f2296" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a4cffcad313069e21b01a648d656f2296" kindref="member">determine_fields_at_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpoty,<sp/></highlight></codeline>
-<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz);</highlight></codeline>
-<codeline lineno="411"><highlight class="normal"></highlight></codeline>
-<codeline lineno="417" refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" kindref="member">multistep_update_begin</ref>()<sp/>{<sp/></highlight></codeline>
-<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" kindref="member">play_back</ref><sp/>and<sp/>not<sp/><ref refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" kindref="member">play_cnew</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" kindref="member">self_consistent</ref>)<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;multistep_update_begin();</highlight></codeline>
-<codeline lineno="420"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="421" refid="class_cylinder_1afbf22ebc466872639f53e2dcd4847975" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1afbf22ebc466872639f53e2dcd4847975" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>next,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="422" refid="class_cylinder_1a77f0370f73afe1d8a759858128dc6df9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a77f0370f73afe1d8a759858128dc6df9" kindref="member">multistep_update_finish</ref>()<sp/>{<sp/></highlight></codeline>
-<codeline lineno="423"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" kindref="member">play_back</ref><sp/>and<sp/>not<sp/><ref refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" kindref="member">play_cnew</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="424"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" kindref="member">self_consistent</ref>)<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;multistep_update_finish();</highlight></codeline>
-<codeline lineno="425"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="427"></codeline>
-<codeline lineno="429" refid="class_cylinder_1ad8f35bcf5fa4a3b686c63b23a1b497b4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1ad8f35bcf5fa4a3b686c63b23a1b497b4" kindref="member">multistep_debug</ref>();</highlight></codeline>
-<codeline lineno="430"><highlight class="normal"></highlight></codeline>
-<codeline lineno="432" refid="class_cylinder_1a15c516b5506bd769ee4cca1f5c838e2a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a15c516b5506bd769ee4cca1f5c838e2a" kindref="member">dump_coefs</ref>(ostream&amp;<sp/>out);</highlight></codeline>
-<codeline lineno="433"><highlight class="normal"></highlight></codeline>
-<codeline lineno="435" refid="class_cylinder_1a0e2194b76e3515007c157ddf7f1dbe72" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a0e2194b76e3515007c157ddf7f1dbe72" kindref="member">dump_coefs_h5</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="436"><highlight class="normal"></highlight></codeline>
-<codeline lineno="438" refid="class_cylinder_1af4c04de3b6630da024459d91ede1e2d1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1af4c04de3b6630da024459d91ede1e2d1" kindref="member">dump_mzero</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>name,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>step);</highlight></codeline>
-<codeline lineno="439"><highlight class="normal"></highlight></codeline>
-<codeline lineno="440"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="441"><highlight class="normal"></highlight></codeline>
-<codeline lineno="442"><highlight class="normal"></highlight></codeline>
-<codeline lineno="443"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_cylinder_8_h.xml b/doxyxml/_cylinder_8_h.xml
deleted file mode 100644
index cd4db86..0000000
--- a/doxyxml/_cylinder_8_h.xml
+++ /dev/null
@@ -1,1017 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_cylinder_8_h" kind="file" language="C++">
-    <compoundname>Cylinder.H</compoundname>
-    <includes local="no">memory</includes>
-    <includes refid="_orient_8_h" local="no">Orient.H</includes>
-    <includes refid="_basis_8_h" local="no">Basis.H</includes>
-    <includes refid="_cyl_e_x_p_8_h" local="no">CylEXP.H</includes>
-    <includes local="no">Coefficients.H</includes>
-    <includes local="no">config_exp.h</includes>
-    <includes local="no">CoefContainer.H</includes>
-    <includedby refid="_two_center_8_h" local="no">/home/weinberg/Projects/EXP/src/TwoCenter.H</includedby>
-    <incdepgraph>
-      <node id="38">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-      </node>
-      <node id="54">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="55">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="70">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="67" relation="include">
-        </childnode>
-      </node>
-      <node id="51">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-      </node>
-      <node id="58">
-        <label>EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="59" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="47" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="60" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="63" relation="include">
-        </childnode>
-        <childnode refid="65" relation="include">
-        </childnode>
-        <childnode refid="72" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-      </node>
-      <node id="62">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="63">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="64" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="69">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="67" relation="include">
-        </childnode>
-        <childnode refid="70" relation="include">
-        </childnode>
-        <childnode refid="68" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="65">
-        <label>SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
-        <childnode refid="66" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
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-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
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-        <childnode refid="40" relation="include">
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-        <childnode refid="71" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-      </node>
-      <node id="42">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
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-      <node id="26">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="39">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="27">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="72">
-        <label>coef.H</label>
-        <link refid="include_2coef_8_h"/>
-      </node>
-      <node id="8">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="60">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="52">
-        <label>header.H</label>
-        <link refid="header_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-      </node>
-      <node id="61">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="62" relation="include">
-        </childnode>
-      </node>
-      <node id="41">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-      </node>
-      <node id="40">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="67">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
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-        <childnode refid="68" relation="include">
-        </childnode>
-        <childnode refid="69" relation="include">
-        </childnode>
-      </node>
-      <node id="68">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="59" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="60" relation="include">
-        </childnode>
-      </node>
-      <node id="71">
-        <label>sltableMP2.H</label>
-        <link refid="sltable_m_p2_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="18">
-        <label>Basis.H</label>
-        <link refid="_basis_8_h"/>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="49">
-        <label>Component.H</label>
-        <link refid="_component_8_h"/>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="50" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
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-        <childnode refid="29" relation="include">
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-        <childnode refid="54" relation="include">
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-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="48">
-        <label>ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="49" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-      </node>
-      <node id="28">
-        <label>CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="43" relation="include">
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-        <childnode refid="58" relation="include">
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-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="2" relation="include">
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-        <childnode refid="74" relation="include">
-        </childnode>
-      </node>
-      <node id="56">
-        <label>ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="49" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Orient.H</label>
-        <link refid="_orient_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
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-        <childnode refid="7" relation="include">
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-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="57">
-        <label>Output.H</label>
-        <link refid="_output_8_h"/>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
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-        <childnode refid="39" relation="include">
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-      </node>
-      <node id="53">
-        <label>ParticleFerry.H</label>
-        <link refid="_particle_ferry_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
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-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="20" relation="include">
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-    <innerclass refid="class_cylinder" prot="public">Cylinder</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Cylinder_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Cylinder_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_orient_8_h" kindref="compound">Orient.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_basis_8_h" kindref="compound">Basis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_cyl_e_x_p_8_h" kindref="compound">CylEXP.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Coefficients.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaParticle.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaMappingConstants.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;CoefContainer.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="comment">//<sp/>This<sp/>prints<sp/>out<sp/>the<sp/>level<sp/>switch<sp/>matrix.<sp/><sp/>For<sp/>deep<sp/>debugging<sp/>only.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="comment">//<sp/>#define<sp/>CYL_UPDATE_TABLE</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref>;</highlight></codeline>
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-<codeline lineno="110"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="123"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="126"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="135" refid="class_cylinder_1aea8a8e1986913f71961bf3164e5f59ba" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_cylinder_1aea8a8e1986913f71961bf3164e5f59ba" kindref="member">cachename</ref>,<sp/><ref refid="class_cylinder_1ac4b0aa8cca2b099927173f54f5d15374" kindref="member">pyname</ref>;</highlight></codeline>
-<codeline lineno="136" refid="class_cylinder_1a34b887a9b700e9bb529dc2990c97e6d0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" kindref="member">self_consistent</ref>,<sp/><ref refid="class_cylinder_1a34b887a9b700e9bb529dc2990c97e6d0" kindref="member">logarithmic</ref>,<sp/><ref refid="class_cylinder_1a998a906122544ef609d64315e29ac010" kindref="member">pcavar</ref>,<sp/><ref refid="class_cylinder_1a7cde3e9c2a02333f1da31e2ea5a23815" kindref="member">pcainit</ref>,<sp/><ref refid="class_cylinder_1afdc928a1a1e6aa7ed2f05543379d89d2" kindref="member">pcavtk</ref>,<sp/><ref refid="class_cylinder_1a18dfd51d53a7b42743201ebea8791dd7" kindref="member">pcadiag</ref>,<sp/><ref refid="class_cylinder_1a5223e5b265f66daf43f40e9e9e7800c1" kindref="member">pcaeof</ref>;</highlight></codeline>
-<codeline lineno="137" refid="class_cylinder_1a408307e5a429e0ba50cbd0b1aa55bd7f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1abba13fc273f5810d1235db57cde60a67" kindref="member">try_cache</ref>,<sp/><ref refid="class_cylinder_1a7a8b54489da5644c1270b6d37ba21c0d" kindref="member">firstime</ref>,<sp/><ref refid="class_cylinder_1a2cc4974e868067cd4ec3124c5b335361" kindref="member">dump_basis</ref>,<sp/><ref refid="class_cylinder_1a408307e5a429e0ba50cbd0b1aa55bd7f" kindref="member">compute</ref>,<sp/><ref refid="class_cylinder_1a17fbe3eb1e8a1070e5f957883591847f" kindref="member">firstime_coef</ref>;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>These<sp/>should<sp/>be<sp/>ok<sp/>for<sp/>all<sp/>derived<sp/>classes,<sp/>hence<sp/>declared<sp/>private</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="class_cylinder_1a31fffadf7f868525edeb6b561357f8bd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a31fffadf7f868525edeb6b561357f8bd" kindref="member">determine_coefficients</ref>();</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="143" refid="class_cylinder_1a84c2eeb8f441c58f78512edf8d5a3f98" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a84c2eeb8f441c58f78512edf8d5a3f98" kindref="member">determine_coefficients_playback</ref>();</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145" refid="class_cylinder_1a9fa4938d576706cd9f654975fdc34f7e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a9fa4938d576706cd9f654975fdc34f7e" kindref="member">determine_coefficients_particles</ref>();</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147" refid="class_cylinder_1a48b39d1e3e02f172018bccc4dd8ad842" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a48b39d1e3e02f172018bccc4dd8ad842" kindref="member">determine_coefficients_eof</ref>();</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="149" refid="class_cylinder_1a2052d5c8fe1589f91215058ebd72ec2a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a2052d5c8fe1589f91215058ebd72ec2a" kindref="member">determine_acceleration_and_potential</ref>();</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151" refid="class_cylinder_1a2362b4060aa3fb06b5b8de448ae61f81" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_cylinder_1a2362b4060aa3fb06b5b8de448ae61f81" kindref="member">determine_coefficients_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153" refid="class_cylinder_1a7833c07ea8eeb02353c696114de18fbc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_cylinder_1a7833c07ea8eeb02353c696114de18fbc" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" kindref="member">compute_multistep_coefficients</ref>();</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_cylinder_1a4ccd3920ba81aabc5051840b7c0d5875" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a4ccd3920ba81aabc5051840b7c0d5875" kindref="member">multistep_reset</ref>();</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165" refid="class_cylinder_1aa04955a71bc38bd5073ac88c728ed33b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref><sp/>*<ref refid="class_cylinder_1aa04955a71bc38bd5073ac88c728ed33b" kindref="member">mix</ref>;</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168" refid="class_cylinder_1a301c653a9d52036222cc9e80d75ef5df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a301c653a9d52036222cc9e80d75ef5df" kindref="member">compute_grid_mass</ref>();</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"></highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"></highlight></codeline>
-<codeline lineno="173" refid="class_cylinder_1a9c9f2064fd2e562d144da4dfab80a274" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1abee587361c163c331bd1ddce15772554" kindref="member">sampT</ref>,<sp/><ref refid="class_cylinder_1a9c9f2064fd2e562d144da4dfab80a274" kindref="member">defSampT</ref>;</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight></codeline>
-<codeline lineno="176"><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_coefficients_cuda(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute_pca);</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_acceleration_cuda();</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>multistep_update_cuda();</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/>thrust::host_vector<sp/><sp/>&lt;cuFP_t&gt;<sp/>host_coefs,<sp/>host_covar,<sp/>host_massT;</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dev_coefs;</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/>std::vector&lt;thrust::host_vector&lt;cuFP_t&gt;&gt;<sp/>host_coefsT,<sp/>host_covarT;</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"></highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>HtoD_coefs();</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>DtoH_coefs(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" kindref="member">mlevel</ref>);</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"></highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/>std::vector&lt;cudaArray_t&gt;<sp/>cuInterpArray;</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/>thrust::host_vector&lt;cudaTextureObject_t&gt;<sp/>tex;</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>initialize_cuda_cyl;</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>()</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1abee587361c163c331bd1ddce15772554" kindref="member">sampT</ref><sp/>=<sp/>floor(sqrt(<ref refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" kindref="member">component</ref>-&gt;<ref refid="class_component_1a19a8ac34f26702235706c33b9161e31e" kindref="member">CurTotal</ref>()));</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;initialize_cuda(cuInterpArray,<sp/>tex);</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;getCudaMappingConstants();</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>destroy_cuda();</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>initialize_mapping_constants();</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"></highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>host_dev_force_compare();</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;cudaTextureObject_t&gt;<sp/>t_d;</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"></highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal">cudaStorage</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dN_coef;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dc_coef;</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dw_coef;</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>df_coef;</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>X_d,<sp/>Y_d,<sp/>m_d,<sp/>u_d,<sp/>p_d;</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;int<sp/><sp/><sp/>&gt;<sp/>iX_d,<sp/>iY_d;</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;thrust::device_vector&lt;cuFP_t&gt;&gt;<sp/>T_covr;</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dN_tvar;</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dW_tvar;</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dc_tvar;</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dw_tvar;</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>df_tvar;</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>resize_coefs(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ncylorder,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>gridSize,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>stride,</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sampT,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>pcavar,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>pcaeof,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>subsamp);</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"></highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/>cudaStorage<sp/>cuS;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_initialize();</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_zero_coefs();</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247"><highlight class="normal"></highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight></codeline>
-<codeline lineno="249"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="250"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255" refid="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;unsigned&gt;&gt;<sp/><ref refid="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" kindref="member">occt</ref>;</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"></highlight></codeline>
-<codeline lineno="258" refid="class_cylinder_1ae05f092861f7abbd4addc7f158d34e52" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1ae05f092861f7abbd4addc7f158d34e52" kindref="member">occt_output</ref>();</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"></highlight></codeline>
-<codeline lineno="263" refid="class_cylinder_1a8221adf2f7752878029457315306b6d3" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CoefClasses::CylCoefs&gt;<sp/><ref refid="class_cylinder_1a8221adf2f7752878029457315306b6d3" kindref="member">playback</ref>;</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="271" refid="class_cylinder_1a82abc17e0b1611dd2879b108a1f12b6d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a82abc17e0b1611dd2879b108a1f12b6d" kindref="member">coefMaster</ref>;</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"></highlight></codeline>
-<codeline lineno="274" refid="class_cylinder_1a6be0605baa5de43ff2578d2870818ac7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a6be0605baa5de43ff2578d2870818ac7" kindref="member">lastPlayTime</ref>;</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"></highlight></codeline>
-<codeline lineno="277" refid="class_cylinder_1a101160d0f44fbe28d1aa349338a6915f" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXcd<sp/><ref refid="class_cylinder_1a101160d0f44fbe28d1aa349338a6915f" kindref="member">P</ref>,<sp/><ref refid="class_cylinder_1ab42b1b72eff2c9aca1fc2b4ba97ca968" kindref="member">P1</ref>;</highlight></codeline>
-<codeline lineno="278"><highlight class="normal"></highlight></codeline>
-<codeline lineno="280" refid="class_cylinder_1a07457e19eb28e7c4b204e26d31c1b267" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a07457e19eb28e7c4b204e26d31c1b267" kindref="member">getCoefs</ref>(Eigen::MatrixXcd&amp;<sp/>C)</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>cosV(C.cols()),<sp/>sinV(C.cols());</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m=0;<sp/>m&lt;=<ref refid="class_cylinder_1a12ec434b1c079bf422d74f09034177a2" kindref="member">mmax</ref>;<sp/>m++)<sp/>{</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;get_coefs(m,<sp/>cosV,<sp/>sinV);</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>C.row(m).real()<sp/>=<sp/>cosV;</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>C.row(m).imag()<sp/>=<sp/>sinV;</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"></highlight></codeline>
-<codeline lineno="291" refid="class_cylinder_1a717a3d56d06af595e0ed1fe364b2525b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a717a3d56d06af595e0ed1fe364b2525b" kindref="member">setCoefs</ref>(Eigen::MatrixXcd&amp;<sp/>C)</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m=0;<sp/>m&lt;=<ref refid="class_cylinder_1a12ec434b1c079bf422d74f09034177a2" kindref="member">mmax</ref>;<sp/>m++)<sp/>{</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>zero<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m==0)<sp/>zero<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_coefs(m,<sp/>C.row(m).real(),<sp/>C.row(m).imag(),<sp/>zero);</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="299"><highlight class="normal"></highlight></codeline>
-<codeline lineno="301" refid="class_cylinder_1a536f1961a271262c6c73a2cd8b074eab" refkind="member"><highlight class="normal"><sp/><sp/>CoefClasses::CylCoefs<sp/><ref refid="class_cylinder_1a536f1961a271262c6c73a2cd8b074eab" kindref="member">cylCoefs</ref>;</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"></highlight></codeline>
-<codeline lineno="304" refid="class_cylinder_1a9a3ad9c738c98c33c997fd74ca3872ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_cylinder_1a9a3ad9c738c98c33c997fd74ca3872ee" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"></highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="307"><highlight class="normal"></highlight></codeline>
-<codeline lineno="309"></codeline>
-<codeline lineno="310" refid="class_cylinder_1a939689b3e2921594c2088dd443dbdcd1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>pthread_mutex_t<sp/><ref refid="class_cylinder_1a9997b96fd22bf7f5d9990cb5dbfdcfb9" kindref="member">used_lock</ref>,<sp/><ref refid="class_cylinder_1a939689b3e2921594c2088dd443dbdcd1" kindref="member">cos_coef_lock</ref>,<sp/><ref refid="class_cylinder_1ac4604b06d6359a220b903dd5b5ef05b3" kindref="member">sin_coef_lock</ref>;</highlight></codeline>
-<codeline lineno="312"></codeline>
-<codeline lineno="352" refid="class_cylinder_1a32f6f757b5d7f130a7a3582077ff990a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a32f6f757b5d7f130a7a3582077ff990a" kindref="member">Cylinder</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>,<sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref><sp/>*m=0);</highlight></codeline>
-<codeline lineno="353"><highlight class="normal"></highlight></codeline>
-<codeline lineno="355" refid="class_cylinder_1a62b974fc969958cc05fa7d72cb5a4395" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a62b974fc969958cc05fa7d72cb5a4395" kindref="member">~Cylinder</ref>();</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="358" refid="class_cylinder_1a7eedc780551196e17ce0949acf5c951c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a7eedc780551196e17ce0949acf5c951c" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*);</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"></highlight></codeline>
-<codeline lineno="361"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="362" refid="class_cylinder_1a021dbbef8f761e75fef8f25316bb71c8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a021dbbef8f761e75fef8f25316bb71c8" kindref="member">determine_fields_at_point_sph</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>theta,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpott,<sp/></highlight></codeline>
-<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp);</highlight></codeline>
-<codeline lineno="367"><highlight class="normal"></highlight></codeline>
-<codeline lineno="369"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="370" refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1" kindref="member">determine_fields_at_point_cyl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz,<sp/></highlight></codeline>
-<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp);</highlight></codeline>
-<codeline lineno="375"><highlight class="normal"></highlight></codeline>
-<codeline lineno="377"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="378" refid="class_cylinder_1a93e53590d9d96600f1a761723130dbc0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a93e53590d9d96600f1a761723130dbc0" kindref="member">determine_fields_at_point_cyl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz,<sp/></highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmin,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a9234ee393feef01aad1ca212f09cd79d" kindref="member">mlim</ref>)</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>MMIN=-1,<sp/>MLIM=-1;</highlight></codeline>
-<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Set<sp/>new<sp/>values<sp/>and<sp/>cache<sp/>current<sp/>values</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(mmin&gt;=0)<sp/>{</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>MMIN<sp/>=<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;get_mmin();</highlight></codeline>
-<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_mmin(mmin);</highlight></codeline>
-<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cylinder_1a9234ee393feef01aad1ca212f09cd79d" kindref="member">mlim</ref>&gt;=0)<sp/>{</highlight></codeline>
-<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>MLIM<sp/>=<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;get_mlim();</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_mlim(<ref refid="class_cylinder_1a9234ee393feef01aad1ca212f09cd79d" kindref="member">mlim</ref>);</highlight></codeline>
-<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"></highlight></codeline>
-<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1" kindref="member">determine_fields_at_point_cyl</ref>(r,<sp/>z,<sp/>phi,</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tdens0,<sp/>tpotl0,<sp/>tdens,<sp/>tpotl,<sp/></highlight></codeline>
-<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tpotr,<sp/>tpotz,<sp/>tpotp);</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight></codeline>
-<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Reset<sp/>limits<sp/>to<sp/>original<sp/>values</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(MMIN&gt;=0)<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_mmin(MMIN);</highlight></codeline>
-<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(MLIM&gt;=0)<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;set_mlim(MLIM);</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"></highlight></codeline>
-<codeline lineno="405"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="406" refid="class_cylinder_1a4cffcad313069e21b01a648d656f2296" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cylinder_1a4cffcad313069e21b01a648d656f2296" kindref="member">determine_fields_at_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpoty,<sp/></highlight></codeline>
-<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz);</highlight></codeline>
-<codeline lineno="411"><highlight class="normal"></highlight></codeline>
-<codeline lineno="417" refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" kindref="member">multistep_update_begin</ref>()<sp/>{<sp/></highlight></codeline>
-<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" kindref="member">play_back</ref><sp/>and<sp/>not<sp/><ref refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" kindref="member">play_cnew</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" kindref="member">self_consistent</ref>)<sp/><ref refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" kindref="member">ortho</ref>-&gt;multistep_update_begin();</highlight></codeline>
-<codeline lineno="420"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>CYL_UPDATE_TABLE</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>((not<sp/><ref refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" kindref="member">component</ref>-&gt;<ref refid="class_component_1a1259cf1d6c00ec47422860f945a11284" kindref="member">NoSwitch</ref>()<sp/>or<sp/><ref refid="global_8_h_1ace19188521d679179f62686801a17451" kindref="member">mdrft</ref>==1)<sp/>or<sp/>(<ref refid="global_8_h_1a75043af440748a82fcf73bb6948b476e" kindref="member">this_step</ref>==0<sp/>and<sp/><ref refid="global_8_h_1ace19188521d679179f62686801a17451" kindref="member">mdrft</ref>==0))<sp/>{</highlight></codeline>
-<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" kindref="member">occt</ref>.resize(multistep+1);</highlight></codeline>
-<codeline lineno="423"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>&amp;<sp/>o<sp/>:<sp/><ref refid="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" kindref="member">occt</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="424"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>o.resize(multistep+1);</highlight></codeline>
-<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::fill(o.begin(),<sp/>o.end(),<sp/>0);</highlight></codeline>
-<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="429"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="435"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>CYL_UPDATE_TABLE</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="438"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="440"></codeline>
-<codeline lineno="442" refid="class_cylinder_1a57315dc95a1b474e33109007f654c20e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cylinder_1a57315dc95a1b474e33109007f654c20e" kindref="member">multistep_add_debug</ref></highlight></codeline>
-<codeline lineno="443"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;std::pair&lt;unsigned,<sp/>unsigned&gt;&gt;&gt;&amp;<sp/>data)</highlight></codeline>
-<codeline lineno="444"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="445"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>total<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;<ref refid="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" kindref="member">occt</ref>.size();<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;<ref refid="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" kindref="member">occt</ref>[i].size();<sp/>j++)<sp/>{</highlight></codeline>
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-<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>total<sp/>+=<sp/>data[i][j].second<sp/>-<sp/>data[i][j].first;</highlight></codeline>
-<codeline lineno="450"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="451"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="452"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="456"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="459"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="465"><highlight class="normal"></highlight></codeline>
-<codeline lineno="466"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="467"><highlight class="normal"></highlight></codeline>
-<codeline lineno="468"><highlight class="normal"></highlight></codeline>
-<codeline lineno="469"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/Cylinder.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_data_grid_8_h.xml b/doxyxml/_data_grid_8_h.xml
deleted file mode 100644
index a92e0a2..0000000
--- a/doxyxml/_data_grid_8_h.xml
+++ /dev/null
@@ -1,176 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_data_grid_8_h" kind="file" language="C++">
-    <compoundname>DataGrid.H</compoundname>
-    <includes local="no">vector</includes>
-    <includes local="no">sstream</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">config_exp.h</includes>
-    <includes refid="_table_grid_8_h" local="no">TableGrid.H</includes>
-    <includes refid="_vtk_grid_8_h" local="no">VtkGrid.H</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/DataGrid.H</label>
-        <link refid="_data_grid_8_h"/>
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-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
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-        </childnode>
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-        </childnode>
-      </node>
-      <node id="6">
-        <label>TableGrid.H</label>
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-        <childnode refid="3" relation="include">
-        </childnode>
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-        <childnode refid="8" relation="include">
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-      </node>
-      <node id="8">
-        <label>ThreeDGrid.H</label>
-        <link refid="_three_d_grid_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
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-      <node id="9">
-        <label>VtkGrid.H</label>
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-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>algorithm</label>
-      </node>
-      <node id="5">
-        <label>config_exp.h</label>
-      </node>
-      <node id="11">
-        <label>fstream</label>
-      </node>
-      <node id="12">
-        <label>limits</label>
-      </node>
-      <node id="7">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
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-        <label>sstream</label>
-      </node>
-      <node id="2">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_data_grid" prot="public">DataGrid</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="_data_grid_8_h_1a25f37cf92309f2fdc81111a77e5bb827" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_data_grid" kindref="compound">DataGrid</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;DataGrid&gt; DataGridPtr</definition>
-        <argsstring></argsstring>
-        <name>DataGridPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DataGrid.H" line="63" column="25" bodyfile="/home/weinberg/Projects/EXP/include/DataGrid.H" bodystart="63" bodyend="-1"/>
-      </memberdef>
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-<codeline lineno="52"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
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-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/DataGrid.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_direct_8_h.xml b/doxyxml/_direct_8_h.xml
deleted file mode 100644
index d635d4e..0000000
--- a/doxyxml/_direct_8_h.xml
+++ /dev/null
@@ -1,325 +0,0 @@
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diff --git a/doxyxml/_disk2d_8_h.xml b/doxyxml/_disk2d_8_h.xml
deleted file mode 100644
index f552fe9..0000000
--- a/doxyxml/_disk2d_8_h.xml
+++ /dev/null
@@ -1,434 +0,0 @@
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-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="gauss_q_8_h" kindref="compound">gaussQ.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="14" refid="_disk2d_8_h_1a44ac299dfbdd6e45965acbe30c201240" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;BiorthCyl&gt;<sp/><ref refid="_disk2d_8_h_1a44ac299dfbdd6e45965acbe30c201240" kindref="member">CylPtr</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_disk2d" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk2d" kindref="compound">Disk2d</ref></highlight></codeline>
-<codeline lineno="84"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_disk2d_1a3f3115795ca60bfb3407e956b39b9f3f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_disk2d_1a3f3115795ca60bfb3407e956b39b9f3f" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_disk2d_1ad8d664fee5f533ca072b01447f29912f" refkind="member"><highlight class="normal"><sp/><sp/>YAML::Node<sp/><ref refid="class_disk2d_1ad8d664fee5f533ca072b01447f29912f" kindref="member">conf</ref>;</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_disk2d_1a0c5ce15858c099820ce785ed3d4c5bd9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_disk2d_8_h_1a44ac299dfbdd6e45965acbe30c201240" kindref="member">CylPtr</ref><sp/><ref refid="class_disk2d_1a0c5ce15858c099820ce785ed3d4c5bd9" kindref="member">ortho</ref>;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_disk2d_1a46efa0914b5caf12d92a8a8db0c89995" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a46efa0914b5caf12d92a8a8db0c89995" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="103" refid="class_disk2d_1a4062a255fe530a4c82ee6554adabb28d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a4062a255fe530a4c82ee6554adabb28d" kindref="member">get_dpotl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>dpr,<sp/>Eigen::MatrixXd&amp;<sp/>dpz,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="class_disk2d_1a6ffa48102c4276bb872b5ce638f5cd8a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a6ffa48102c4276bb872b5ce638f5cd8a" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_disk2d_1aff75021afb085126215aabd3221fc1d2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1aff75021afb085126215aabd3221fc1d2" kindref="member">getRtable</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a0c5ce15858c099820ce785ed3d4c5bd9" kindref="member">ortho</ref>-&gt;getRtable();<sp/>}</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="class_disk2d_1aebd6e3673258a4c0f932b016c6ea69be" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1aebd6e3673258a4c0f932b016c6ea69be" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="class_disk2d_1a63ee411d9f3a5aa0ea0a7e56793878e5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a63ee411d9f3a5aa0ea0a7e56793878e5" kindref="member">get_potl_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119" refid="class_disk2d_1a5f48168e084ba90ab34d04ec8739d2c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a5f48168e084ba90ab34d04ec8739d2c2" kindref="member">acyltbl</ref>,<sp/><ref refid="class_disk2d_1a2deb54317f548f10d593884253e434ae" kindref="member">scale</ref>,<sp/><ref refid="class_disk2d_1a4cfb31d57dcf2d6a4b0f396239049fb8" kindref="member">rcylmin</ref>,<sp/><ref refid="class_disk2d_1aa0fc03cbff8a8a12d23562d5d933569c" kindref="member">rcylmax</ref>;</highlight></codeline>
-<codeline lineno="120" refid="class_disk2d_1a4aa8d72e39f514b9706db3cbca513771" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_1a4aa8d72e39f514b9706db3cbca513771" kindref="member">numr</ref>;</highlight></codeline>
-<codeline lineno="121" refid="class_disk2d_1a1aef79044d348df479c7e57606209375" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_1a1aef79044d348df479c7e57606209375" kindref="member">mmax</ref>;</highlight></codeline>
-<codeline lineno="122" refid="class_disk2d_1a76e3d25513734b03ad6fef90bb9e9e65" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_1a76e3d25513734b03ad6fef90bb9e9e65" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="123" refid="class_disk2d_1ac6fc5edb2d4538837b380556ec52fab1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_1ac6fc5edb2d4538837b380556ec52fab1" kindref="member">knots</ref>;</highlight></codeline>
-<codeline lineno="124" refid="class_disk2d_1a56e8d381a9324b51a3ba29529e6056c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a56e8d381a9324b51a3ba29529e6056c8" kindref="member">model</ref>;</highlight></codeline>
-<codeline lineno="125" refid="class_disk2d_1a1136d383ae80114753df01fe3d4d23c7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a1136d383ae80114753df01fe3d4d23c7" kindref="member">biorth</ref>;</highlight></codeline>
-<codeline lineno="126" refid="class_disk2d_1a6eef49d2011b29946adbeea0195365cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_disk2d_1a6eef49d2011b29946adbeea0195365cf" kindref="member">logr</ref>;</highlight></codeline>
-<codeline lineno="128"></codeline>
-<codeline lineno="130"><highlight class="normal"></highlight></codeline>
-<codeline lineno="131" refid="class_disk2d_1a38da5855bfc8d38751d16631780512bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_1a38da5855bfc8d38751d16631780512bc" kindref="member">nthrds</ref>;</highlight></codeline>
-<codeline lineno="132" refid="class_disk2d_1afae3f8327240c245c16c6f1f13bd0d64" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_disk2d_1afae3f8327240c245c16c6f1f13bd0d64" kindref="member">accum_setup</ref>,<sp/><ref refid="class_disk2d_1a38da7932c9af589c04098894d8a61e21" kindref="member">coefs_made</ref>;</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"></highlight></codeline>
-<codeline lineno="138" refid="class_disk2d_1a6fe6eb51569ea9e92bcbbb15d3638baf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a6fe6eb51569ea9e92bcbbb15d3638baf" kindref="member">get_pot</ref>(Eigen::MatrixXd&amp;<sp/>Vc,<sp/>Eigen::MatrixXd&amp;<sp/>Vs,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_disk2d_1a0c5ce15858c099820ce785ed3d4c5bd9" kindref="member">ortho</ref>-&gt;get_pot(Vc,<sp/>Vs,<sp/>r,<sp/>z);<sp/>}</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142" refid="class_disk2d_1a997786327d5859e26c38c7b18e5ffa28" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_disk2d_1a997786327d5859e26c38c7b18e5ffa28" kindref="member">expcoef0</ref>;</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145" refid="class_disk2d_1ab4be2ca5aa9f62c7ba2cf2f1643bbafc" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_disk2d_1ab4be2ca5aa9f62c7ba2cf2f1643bbafc" kindref="member">potd</ref>;</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148" refid="class_disk2d_1acf20d580cbe31b543a663a1f1530b323" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_disk2d_1acf20d580cbe31b543a663a1f1530b323" kindref="member">dend</ref>,<sp/><ref refid="class_disk2d_1ad0245fee0e0009004439d3d2e21b6855" kindref="member">potl</ref>,<sp/><ref refid="class_disk2d_1a6c31244aaaa4f3e59196af2b480061bb" kindref="member">potr</ref>,<sp/><ref refid="class_disk2d_1a33c71b4b59ea0b6d3b6123f764de9a89" kindref="member">potz</ref>;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151" refid="class_disk2d_1a221d49036e16a07d2449518b0c165a92" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_disk2d_1a221d49036e16a07d2449518b0c165a92" kindref="member">expcoef</ref>;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="154" refid="class_disk2d_1a5cf1b818c5f118099de9fb3c17e025f7" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_disk2d_1a5cf1b818c5f118099de9fb3c17e025f7" kindref="member">cylmass1</ref>;</highlight></codeline>
-<codeline lineno="155" refid="class_disk2d_1ae3d47547afc0882b2eb5b38172bf26ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1ae3d47547afc0882b2eb5b38172bf26ee" kindref="member">cylmass</ref>;</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"></highlight></codeline>
-<codeline lineno="158" refid="class_disk2d_1acca2c24ab2d1f93f0a5024bcbf409810" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1acca2c24ab2d1f93f0a5024bcbf409810" kindref="member">setup_accum</ref>();</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Global<sp/>parameters</highlight></codeline>
-<codeline lineno="163" refid="class_disk2d_1a32d15a1559d17750d1ed7a939fcd7ec9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_1a32d15a1559d17750d1ed7a939fcd7ec9" kindref="member">Disk2d</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_disk2d_1ad8d664fee5f533ca072b01447f29912f" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166" refid="class_disk2d_1afe1948ed416c2f045a6009aa77bf10fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1afe1948ed416c2f045a6009aa77bf10fd" kindref="member">~Disk2d</ref>();</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169" refid="class_disk2d_1ae138ffa216f06265422eef752792ac33" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1ae138ffa216f06265422eef752792ac33" kindref="member">setup_accumulation</ref>();</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="172" refid="class_disk2d_1aa00177fafc293a7593af3048bb343ac3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1aa00177fafc293a7593af3048bb343ac3" kindref="member">make_coefficients</ref>();</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight></codeline>
-<codeline lineno="175" refid="class_disk2d_1a6513ba0d117243aaecf9d18ed65a9f28" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a6513ba0d117243aaecf9d18ed65a9f28" kindref="member">write_coefficients</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>outfile);</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"></highlight></codeline>
-<codeline lineno="178" refid="class_disk2d_1a101896358c23dec008a8b0cee32b0f1c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a101896358c23dec008a8b0cee32b0f1c" kindref="member">accumulate</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass);</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181" refid="class_disk2d_1a21af8455280866fb7607222a66800201" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a21af8455280866fb7607222a66800201" kindref="member">accumulate</ref>(std::vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"></highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/>std::tuple&lt;double,<sp/>double,<sp/>double,<sp/>double,<sp/>double,<sp/>double,<sp/>double&gt;</highlight></codeline>
-<codeline lineno="185" refid="class_disk2d_1a2d034f84c0d04de26126608d63b724dc" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_1a2d034f84c0d04de26126608d63b724dc" kindref="member">accumulated_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi);</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"></highlight></codeline>
-<codeline lineno="188" refid="class_disk2d_1a5288630a83478a6987537b72681bbea1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a5288630a83478a6987537b72681bbea1" kindref="member">inner_product</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>dens,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a4aa8d72e39f514b9706db3cbca513771" kindref="member">numr</ref>,</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nlim=std::numeric_limits&lt;int&gt;::max());</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"></highlight></codeline>
-<codeline lineno="192" refid="class_disk2d_1a76e162b8e4dd274927901880dce530de" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_disk2d_1a76e162b8e4dd274927901880dce530de" kindref="member">get_coefs</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_1a221d49036e16a07d2449518b0c165a92" kindref="member">expcoef</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="193"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"></highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_disk2d_halo_8_h.xml b/doxyxml/_disk2d_halo_8_h.xml
deleted file mode 100644
index f3af3d5..0000000
--- a/doxyxml/_disk2d_halo_8_h.xml
+++ /dev/null
@@ -1,836 +0,0 @@
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-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Thrown<sp/>from<sp/>source<sp/>file<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/><sp/>&lt;&lt;<sp/>message<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;<sp/>at<sp/>line<sp/>number<sp/>&lt;&quot;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="41" refid="class_disk2d_halo_1ae8dbed923b2ca06fc001374563ce96ba" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SphericalModelMulti&gt;<sp/><ref refid="class_disk2d_halo_1ae8dbed923b2ca06fc001374563ce96ba" kindref="member">multi</ref>;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_disk2d_halo_1ac1b55e46d5a3dd65945b359f76e6ab61" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;ExponentialDisk&gt;<sp/><ref refid="class_disk2d_halo_1ac1b55e46d5a3dd65945b359f76e6ab61" kindref="member">disk</ref>;</highlight></codeline>
-<codeline lineno="44" refid="class_disk2d_halo_1ae82e9f5f21bfd3350c6c38015048bb1a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a8aa6e319cf14b5e3553423f864764d9b" kindref="member">scalelength</ref>,<sp/><ref refid="class_disk2d_halo_1ae82e9f5f21bfd3350c6c38015048bb1a" kindref="member">dmass</ref>;</highlight></codeline>
-<codeline lineno="45" refid="class_disk2d_halo_1a80d992e2decf960cbbe756ef8a98bf5b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a80d992e2decf960cbbe756ef8a98bf5b" kindref="member">center_pos</ref>[3],<sp/><ref refid="class_disk2d_halo_1a023c6aed59a7bc2415feaa05b16b314d" kindref="member">center_vel</ref>[3];</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_disk2d_halo_1a8350e57b15125129caa9f3e11b76f303" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref><sp/><ref refid="class_disk2d_halo_1a8350e57b15125129caa9f3e11b76f303" kindref="member">expandh</ref>;</highlight></codeline>
-<codeline lineno="48" refid="class_disk2d_halo_1a5b91883c45e87a744bffd9f9fa67d294" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;Disk2d&gt;<sp/><ref refid="class_disk2d_halo_1a5b91883c45e87a744bffd9f9fa67d294" kindref="member">expandd</ref>;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_disk2d_halo_1a55a306d3cb565a3cc0745d7407f2aacd" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_disk2d_halo_1a2446265d0516fd3a03909625440e143e" kindref="member">epitable</ref>,<sp/><ref refid="class_disk2d_halo_1a703880b6e73b82fd3d875499d921988a" kindref="member">dv2table</ref>,<sp/><ref refid="class_disk2d_halo_1a55a306d3cb565a3cc0745d7407f2aacd" kindref="member">asytable</ref>;</highlight></codeline>
-<codeline lineno="51" refid="class_disk2d_halo_1af1e413c1e25b2bd839b9b8774e7a097e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1af1e413c1e25b2bd839b9b8774e7a097e" kindref="member">dP</ref>,<sp/><ref refid="class_disk2d_halo_1ae8ddf0457bfba7e50736303c70641b26" kindref="member">dR</ref>,<sp/><ref refid="class_disk2d_halo_1aded48ff3cfbb370de0888607e712c2b4" kindref="member">dZ</ref>,<sp/><ref refid="class_disk2d_halo_1ac337d5749bd5d9b8b1908c774b9c0ebd" kindref="member">sigma0</ref>;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_disk2d_halo_1a89176afabfd3b080173f9bc7613f7a5d" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_disk2d_halo_1a89176afabfd3b080173f9bc7613f7a5d" kindref="member">halotable</ref>;</highlight></codeline>
-<codeline lineno="54" refid="class_disk2d_halo_1aff8f16fe4f86093aed59242f31953e61" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a70c56771a1c33fcfdd712dbdaa457791" kindref="member">dr</ref>,<sp/><ref refid="class_disk2d_halo_1aff8f16fe4f86093aed59242f31953e61" kindref="member">dc</ref>;</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_disk2d_halo_1af0c568c2b9cf9a8b1f3a952d2304aefe" refkind="member"><highlight class="normal"><sp/><sp/>std::mt19937<sp/><ref refid="class_disk2d_halo_1af0c568c2b9cf9a8b1f3a952d2304aefe" kindref="member">gen</ref>;</highlight></codeline>
-<codeline lineno="57" refid="class_disk2d_halo_1a8e8cd5392a4c2876f70bd21c45a0292f" refkind="member"><highlight class="normal"><sp/><sp/>std::uniform_real_distribution&lt;&gt;<sp/><ref refid="class_disk2d_halo_1a8e8cd5392a4c2876f70bd21c45a0292f" kindref="member">rndU</ref>;</highlight></codeline>
-<codeline lineno="58" refid="class_disk2d_halo_1a2f7d5026e9189ab31db46b0d8907b08d" refkind="member"><highlight class="normal"><sp/><sp/>std::normal_distribution&lt;&gt;<sp/><ref refid="class_disk2d_halo_1a2f7d5026e9189ab31db46b0d8907b08d" kindref="member">rndN</ref>;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_disk2d_halo_1a9c86a0d338b838f9a61b17eb20669c85" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a9c86a0d338b838f9a61b17eb20669c85" kindref="member">DF</ref>;</highlight></codeline>
-<codeline lineno="61" refid="class_disk2d_halo_1ac14a52162111ad9d5784e14c055caaa7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ac14a52162111ad9d5784e14c055caaa7" kindref="member">MULTI</ref>;</highlight></codeline>
-<codeline lineno="62" refid="class_disk2d_halo_1a842077a0af4b18292e76ffe2ecb00990" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a842077a0af4b18292e76ffe2ecb00990" kindref="member">com</ref>;</highlight></codeline>
-<codeline lineno="63" refid="class_disk2d_halo_1a25befa93079bf570ff1a2501df06241c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a25befa93079bf570ff1a2501df06241c" kindref="member">cov</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_disk2d_halo_1a998ba7968307bcf6b771b0c28e0aea8c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a998ba7968307bcf6b771b0c28e0aea8c" kindref="member">bunchcnt</ref><sp/>=<sp/>16384;</highlight></codeline>
-<codeline lineno="66" refid="class_disk2d_halo_1a1d7c0177286d05985c32cc27c8411dc9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a1d7c0177286d05985c32cc27c8411dc9" kindref="member">bufcnt</ref>;</highlight></codeline>
-<codeline lineno="67" refid="class_disk2d_halo_1a936be91eb13df7db14489052d9629950" refkind="member"><highlight class="normal"><sp/><sp/>std::ostringstream<sp/><ref refid="class_disk2d_halo_1a936be91eb13df7db14489052d9629950" kindref="member">bufout</ref>;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_disk2d_halo_1a6ce5a7ae74d43e93120b6ef514df975c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a6ce5a7ae74d43e93120b6ef514df975c" kindref="member">disk_surface_density</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="70" refid="class_disk2d_halo_1a5498db14452d9d874fdca7501f23b510" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a5498db14452d9d874fdca7501f23b510" kindref="member">write_record</ref>(ostream<sp/>&amp;out,<sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/>&amp;p);</highlight></codeline>
-<codeline lineno="71" refid="class_disk2d_halo_1ac8fe0257dea77ab69aa2beea9cc2e1f6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ac8fe0257dea77ab69aa2beea9cc2e1f6" kindref="member">write_record</ref>(ostream<sp/>&amp;out,<sp/><ref refid="class_particle" kindref="compound">Particle</ref><sp/>&amp;p)</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/>P(p);</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a5498db14452d9d874fdca7501f23b510" kindref="member">write_record</ref>(out,<sp/>P);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="76" refid="class_disk2d_halo_1a80cfd1b17d412ef55ca6c20c2a83fdd7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a80cfd1b17d412ef55ca6c20c2a83fdd7" kindref="member">flush_buffer</ref>(ostream<sp/>&amp;out);</highlight></codeline>
-<codeline lineno="77" refid="class_disk2d_halo_1ad0e327728f9bf9818de1356051d17cbe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ad0e327728f9bf9818de1356051d17cbe" kindref="member">table_halo_disp</ref>();</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>frequency<sp/>computation</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>mass<sp/>and<sp/>number<sp/>bins,<sp/>log<sp/>spaced</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_disk2d_halo_1a52650697eb13e5c6043c6b1bb782c703" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a52650697eb13e5c6043c6b1bb782c703" kindref="member">nh</ref><sp/>=<sp/>50;</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Minimum<sp/>number<sp/>on<sp/>grid<sp/>before<sp/>computing</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_disk2d_halo_1ab1c42dac984e8dfd7f914e83a8d86155" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ab1c42dac984e8dfd7f914e83a8d86155" kindref="member">mh</ref><sp/>=<sp/>5;</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Boundaries<sp/>and<sp/>delta</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_disk2d_halo_1a3fbf4b2ad524d720d225f0bc7d9fd898" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1af096e451c1512bbfd274075a1ec5d887" kindref="member">hDmin</ref>,<sp/><ref refid="class_disk2d_halo_1ad4bf804f02e6363bd6bfb2d4e643fe46" kindref="member">hDmax</ref>,<sp/><ref refid="class_disk2d_halo_1a3fbf4b2ad524d720d225f0bc7d9fd898" kindref="member">dRh</ref>;</highlight></codeline>
-<codeline lineno="87" refid="class_disk2d_halo_1aa1f4859f54a6e59b00cfee8af6fd675b" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><sp/><sp/><ref refid="class_disk2d_halo_1aa1f4859f54a6e59b00cfee8af6fd675b" kindref="member">nhD</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Mass<sp/>in<sp/>bins</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_disk2d_halo_1afb5c4f779a5b99cf55ffc56b009cdc37" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><sp/><sp/><ref refid="class_disk2d_halo_1afb5c4f779a5b99cf55ffc56b009cdc37" kindref="member">nhM</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Cumulative<sp/>mass<sp/>in<sp/>bins</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_disk2d_halo_1a0be93a05f48591a0dc79fe5f60819ea8" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;unsigned&gt;<sp/><ref refid="class_disk2d_halo_1a0be93a05f48591a0dc79fe5f60819ea8" kindref="member">nhN</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>in<sp/>bins</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="90" refid="class_disk2d_halo_1ac0e4716e40699325a42453ba9483dfd0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ac0e4716e40699325a42453ba9483dfd0" kindref="member">nzero</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Computed<sp/>minimum<sp/>mesh<sp/>point</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_disk2d_halo_1a62454fecaef03d9748c55b757d9275ad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a62454fecaef03d9748c55b757d9275ad" kindref="member">nzepi</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Computed<sp/>minimum<sp/>epi<sp/>value</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>Spline<sp/>integration<sp/>rather<sp/>than<sp/>Trapezoidal<sp/>rule</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_disk2d_halo_1adf24dd69d0ceff99e7aef7cffdeb98ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1adf24dd69d0ceff99e7aef7cffdeb98ae" kindref="member">use_spline</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="97" refid="class_disk2d_halo_1_1_c_map" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk2d_halo_1_1_c_map" kindref="compound">CMap</ref></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="100" refid="class_disk2d_halo_1_1_c_map_1ace3c3eccd3221b0517dd2eb5b8fefb0f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_map_1ace3c3eccd3221b0517dd2eb5b8fefb0f" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="101" refid="class_disk2d_halo_1_1_c_map_1ac5cd1316336bf98be37c7f82b8c8cf4b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_map_1ac5cd1316336bf98be37c7f82b8c8cf4b" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104" refid="class_disk2d_halo_1_1_c_lin" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk2d_halo_1_1_c_lin" kindref="compound">CLin</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_map" kindref="compound">CMap</ref></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_disk2d_halo_1_1_c_lin_1af93436c0100ac068caabe6ecd407f8ce" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_lin_1af93436c0100ac068caabe6ecd407f8ce" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>x;<sp/>}</highlight></codeline>
-<codeline lineno="109" refid="class_disk2d_halo_1_1_c_lin_1aa7274a55e8e6a96928c84b582986ec6f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_lin_1aa7274a55e8e6a96928c84b582986ec6f" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;<sp/>}</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="class_disk2d_halo_1_1_c_log" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk2d_halo_1_1_c_log" kindref="compound">CLog</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_map" kindref="compound">CMap</ref></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116" refid="class_disk2d_halo_1_1_c_log_1a0892f08a698b3546875aea4e69ea705e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_log_1a0892f08a698b3546875aea4e69ea705e" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>exp(x);<sp/>}</highlight></codeline>
-<codeline lineno="117" refid="class_disk2d_halo_1_1_c_log_1a6331fd72dcf8904fc0eb3a896e5dc8b5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_log_1a6331fd72dcf8904fc0eb3a896e5dc8b5" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>log(r);<sp/>}</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120" refid="class_disk2d_halo_1_1_c_rat" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk2d_halo_1_1_c_rat" kindref="compound">CRat</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_map" kindref="compound">CMap</ref></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="123" refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127" refid="class_disk2d_halo_1_1_c_rat_1a67dc186f2afe82ffcfcad719442d5908" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_c_rat_1a67dc186f2afe82ffcfcad719442d5908" kindref="member">CRat</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>)<sp/><sp/>:<sp/><ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>(<ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>)<sp/><sp/><sp/>{}</highlight></codeline>
-<codeline lineno="128" refid="class_disk2d_halo_1_1_c_rat_1a33fca1f6d2fac5da785cf078849abe58" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_c_rat_1a33fca1f6d2fac5da785cf078849abe58" kindref="member">CRat</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_rat" kindref="compound">CRat</ref>&amp;<sp/>p)<sp/>:<sp/><ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>(p.<ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>)<sp/>{}</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"></highlight></codeline>
-<codeline lineno="130" refid="class_disk2d_halo_1_1_c_rat_1accee188cd2ebb633c9a5a96fec51eeed" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_rat_1accee188cd2ebb633c9a5a96fec51eeed" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>*(x<sp/>+<sp/>1.0)/(x<sp/>-<sp/>1.0);<sp/>}</highlight></codeline>
-<codeline lineno="131" refid="class_disk2d_halo_1_1_c_rat_1a6380499b541f170521b390ce0f236153" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_c_rat_1a6380499b541f170521b390ce0f236153" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(r<sp/>+<sp/><ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>)/(r<sp/>-<sp/><ref refid="class_disk2d_halo_1_1_c_rat_1aff9e832a13f63235610d75871df563a7" kindref="member">scale</ref>);<sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134" refid="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CMap&gt;<sp/><ref refid="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" kindref="member">cmap</ref>;</highlight></codeline>
-<codeline lineno="135" refid="class_disk2d_halo_1a4796c8cd7f224eccc3716e832c53f863" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a069a3b910f3addabe03be7a20d2dbf5a" kindref="member">Xmin</ref>,<sp/><ref refid="class_disk2d_halo_1a4796c8cd7f224eccc3716e832c53f863" kindref="member">Xmax</ref>;</highlight></codeline>
-<codeline lineno="136" refid="class_disk2d_halo_1a9e16f3b2057d167bb17fc5e02a96eb8f" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_disk2d_halo_1a9e16f3b2057d167bb17fc5e02a96eb8f" kindref="member">mtype</ref>;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"></highlight></codeline>
-<codeline lineno="138" refid="class_disk2d_halo_1a40e6c12222f62fe49b456e92313be1a4" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CMap&gt;<sp/><ref refid="class_disk2d_halo_1a40e6c12222f62fe49b456e92313be1a4" kindref="member">make_cmap</ref>(std::string<sp/><ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>scale)</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/>std::for_each(<ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>.begin(),<sp/><ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>.end(),<sp/>[](</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>&amp;<sp/>c){<sp/>c<sp/>=<sp/>::tolower(c);<sp/>});</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;CMap&gt;<sp/><ref refid="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" kindref="member">cmap</ref>;</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>.find(</highlight><highlight class="stringliteral">&quot;linear&quot;</highlight><highlight class="normal">)<sp/>==<sp/>0)<sp/><sp/><sp/><ref refid="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" kindref="member">cmap</ref><sp/>=<sp/>std::make_shared&lt;CLin&gt;();</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>.find(</highlight><highlight class="stringliteral">&quot;log&quot;</highlight><highlight class="normal">)<sp/>==<sp/>0)<sp/><ref refid="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" kindref="member">cmap</ref><sp/>=<sp/>std::make_shared&lt;CLog&gt;();</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>.find(</highlight><highlight class="stringliteral">&quot;rat&quot;</highlight><highlight class="normal">)<sp/>==<sp/>0)<sp/><ref refid="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" kindref="member">cmap</ref><sp/>=<sp/>std::make_shared&lt;CRat&gt;(scale);</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" kindref="member">cmap</ref><sp/>=<sp/>std::make_shared&lt;CLog&gt;();</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" kindref="member">cmap</ref>;</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight></codeline>
-<codeline lineno="152" refid="class_disk2d_halo_1_1_gen_phi" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk2d_halo_1_1_gen_phi" kindref="compound">GenPhi</ref></highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156" refid="class_disk2d_halo_1_1_gen_phi_1aadb7c282cae2124c6e19b57b0c244384" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1abe8b4b726a29f08515ef2f501ba01beb" kindref="member">scale</ref>,<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1aadb7c282cae2124c6e19b57b0c244384" kindref="member">baramp</ref>;</highlight></codeline>
-<codeline lineno="157" refid="class_disk2d_halo_1_1_gen_phi_1ae04d2084975d7fdf2447f6814c6d1415" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1acaa1e4d39a51c95827b51489ad86e802" kindref="member">numtot</ref>,<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae04d2084975d7fdf2447f6814c6d1415" kindref="member">numbar</ref>;</highlight></codeline>
-<codeline lineno="158" refid="class_disk2d_halo_1_1_gen_phi_1a6f1867715fbf5e22a289cce2b9245273" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a6f1867715fbf5e22a289cce2b9245273" kindref="member">m</ref>;</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160" refid="class_disk2d_halo_1_1_gen_phi_1aeadf2e5a9d4dc01bdb3c20ea5478892c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::random_device<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1aeadf2e5a9d4dc01bdb3c20ea5478892c" kindref="member">dev</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Random<sp/>device</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="161" refid="class_disk2d_halo_1_1_gen_phi_1a126d68bf057ea079acef55ed452a9a39" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::mt19937<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a126d68bf057ea079acef55ed452a9a39" kindref="member">rng</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Random<sp/>generator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_disk2d_halo_1_1_gen_phi_1aa18bdf15d77af81e405562b6dd5420ec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::uniform_real_distribution&lt;&gt;<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1aa18bdf15d77af81e405562b6dd5420ec" kindref="member">dist</ref>;<sp/></highlight><highlight class="comment">//<sp/>Random<sp/>distribution</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="164" refid="class_disk2d_halo_1_1_gen_phi_1a40daa79cafd7c32906a0e0fd08825250" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">constexpr</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a40daa79cafd7c32906a0e0fd08825250" kindref="member">numcnt</ref><sp/>=<sp/>32;</highlight></codeline>
-<codeline lineno="165" refid="class_disk2d_halo_1_1_gen_phi_1ae2b7cf124993ee7a0eafb4f57e377670" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;unsigned&gt;<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae2b7cf124993ee7a0eafb4f57e377670" kindref="member">counts</ref>;</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169" refid="class_disk2d_halo_1_1_gen_phi_1a47e8f2c02ce8d369f0e7b1412b1a8491" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a47e8f2c02ce8d369f0e7b1412b1a8491" kindref="member">GenPhi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1abe8b4b726a29f08515ef2f501ba01beb" kindref="member">scale</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>amp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a6f1867715fbf5e22a289cce2b9245273" kindref="member">m</ref>)<sp/>:</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1abe8b4b726a29f08515ef2f501ba01beb" kindref="member">scale</ref>(<ref refid="class_disk2d_halo_1_1_gen_phi_1abe8b4b726a29f08515ef2f501ba01beb" kindref="member">scale</ref>),<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1aadb7c282cae2124c6e19b57b0c244384" kindref="member">baramp</ref>(amp),<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1acaa1e4d39a51c95827b51489ad86e802" kindref="member">numtot</ref>(0),<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae04d2084975d7fdf2447f6814c6d1415" kindref="member">numbar</ref>(0),<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a6f1867715fbf5e22a289cce2b9245273" kindref="member">m</ref>(<ref refid="class_disk2d_halo_1_1_gen_phi_1a6f1867715fbf5e22a289cce2b9245273" kindref="member">m</ref>)</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a126d68bf057ea079acef55ed452a9a39" kindref="member">rng</ref><sp/>=<sp/>std::mt19937(<ref refid="class_disk2d_halo_1_1_gen_phi_1aeadf2e5a9d4dc01bdb3c20ea5478892c" kindref="member">dev</ref>());<sp/></highlight><highlight class="comment">//<sp/>Set<sp/>generator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1aa18bdf15d77af81e405562b6dd5420ec" kindref="member">dist</ref><sp/>=<sp/>std::uniform_real_distribution&lt;&gt;(0.0,<sp/>1.0);<sp/></highlight><highlight class="comment">//<sp/>Set<sp/>distribution</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae2b7cf124993ee7a0eafb4f57e377670" kindref="member">counts</ref>.resize(<ref refid="class_disk2d_halo_1_1_gen_phi_1a40daa79cafd7c32906a0e0fd08825250" kindref="member">numcnt</ref>,<sp/>0);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="177" refid="class_disk2d_halo_1_1_gen_phi_1a51926bea7bcdef3dbb14b39088bd47ab" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a51926bea7bcdef3dbb14b39088bd47ab" kindref="member">Angle</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1acaa1e4d39a51c95827b51489ad86e802" kindref="member">numtot</ref>++;</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Relative<sp/>bar<sp/>amplitude<sp/>factor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>f<sp/>=<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1aadb7c282cae2124c6e19b57b0c244384" kindref="member">baramp</ref>*exp(-(r<sp/>-<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1abe8b4b726a29f08515ef2f501ba01beb" kindref="member">scale</ref>)*(r<sp/>-<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1abe8b4b726a29f08515ef2f501ba01beb" kindref="member">scale</ref>)/(2.0*<ref refid="class_disk2d_halo_1_1_gen_phi_1abe8b4b726a29f08515ef2f501ba01beb" kindref="member">scale</ref>*<ref refid="class_disk2d_halo_1_1_gen_phi_1abe8b4b726a29f08515ef2f501ba01beb" kindref="member">scale</ref>*0.09));</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"></highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Do<sp/>we<sp/>have<sp/>a<sp/>bar<sp/>particle?<sp/>(Factor<sp/>of<sp/>2<sp/>accounts<sp/>for<sp/>[-1,<sp/>1]</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>range<sp/>of<sp/>cos(m*phi)<sp/>amplitude)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_disk2d_halo_1_1_gen_phi_1aa18bdf15d77af81e405562b6dd5420ec" kindref="member">dist</ref>(<ref refid="class_disk2d_halo_1_1_gen_phi_1a126d68bf057ea079acef55ed452a9a39" kindref="member">rng</ref>)<sp/>&lt;<sp/>f*2.0)<sp/>{</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae04d2084975d7fdf2447f6814c6d1415" kindref="member">numbar</ref>++;</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Compute<sp/>quadrupole<sp/>angle</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>dp<sp/>=<sp/>[</highlight><highlight class="keyword">this</highlight><highlight class="normal">](</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi)</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.5*(1.0<sp/>+<sp/>cos(phi*this-&gt;m));<sp/>};</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi<sp/>=<sp/>2.0*M_PI*<ref refid="class_disk2d_halo_1_1_gen_phi_1aa18bdf15d77af81e405562b6dd5420ec" kindref="member">dist</ref>(<ref refid="class_disk2d_halo_1_1_gen_phi_1a126d68bf057ea079acef55ed452a9a39" kindref="member">rng</ref>);</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(dp(phi)<sp/>&lt;<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1aa18bdf15d77af81e405562b6dd5420ec" kindref="member">dist</ref>(<ref refid="class_disk2d_halo_1_1_gen_phi_1a126d68bf057ea079acef55ed452a9a39" kindref="member">rng</ref>))<sp/>{</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>phi<sp/>=<sp/>2.0*M_PI*<ref refid="class_disk2d_halo_1_1_gen_phi_1aa18bdf15d77af81e405562b6dd5420ec" kindref="member">dist</ref>(<ref refid="class_disk2d_halo_1_1_gen_phi_1a126d68bf057ea079acef55ed452a9a39" kindref="member">rng</ref>);</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Debug</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cnt<sp/>=<sp/>floor(phi*<ref refid="class_disk2d_halo_1_1_gen_phi_1a40daa79cafd7c32906a0e0fd08825250" kindref="member">numcnt</ref>/(2.0*M_PI));</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(cnt&gt;=0<sp/>and<sp/>cnt&lt;<ref refid="class_disk2d_halo_1_1_gen_phi_1a40daa79cafd7c32906a0e0fd08825250" kindref="member">numcnt</ref>)<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae2b7cf124993ee7a0eafb4f57e377670" kindref="member">counts</ref>[cnt]++;</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Random<sp/>azimuthal<sp/>angle</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*M_PI*<ref refid="class_disk2d_halo_1_1_gen_phi_1aa18bdf15d77af81e405562b6dd5420ec" kindref="member">dist</ref>(<ref refid="class_disk2d_halo_1_1_gen_phi_1a126d68bf057ea079acef55ed452a9a39" kindref="member">rng</ref>);</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"></highlight></codeline>
-<codeline lineno="208" refid="class_disk2d_halo_1_1_gen_phi_1a581ac941b3e32efafba43a2aa3fa9cbc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::tuple&lt;unsigned,<sp/>unsigned,<sp/>std::vector&lt;unsigned&gt;&gt;<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a581ac941b3e32efafba43a2aa3fa9cbc" kindref="member">getStats</ref>()</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>MPI_Allreduce(MPI_IN_PLACE,<sp/>&amp;<ref refid="class_disk2d_halo_1_1_gen_phi_1acaa1e4d39a51c95827b51489ad86e802" kindref="member">numtot</ref>,<sp/>1,<sp/>MPI_UNSIGNED,<sp/>MPI_SUM,<sp/>MPI_COMM_WORLD);</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>MPI_Allreduce(MPI_IN_PLACE,<sp/>&amp;<ref refid="class_disk2d_halo_1_1_gen_phi_1ae04d2084975d7fdf2447f6814c6d1415" kindref="member">numbar</ref>,<sp/>1,<sp/>MPI_UNSIGNED,<sp/>MPI_SUM,<sp/>MPI_COMM_WORLD);</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>MPI_Allreduce(MPI_IN_PLACE,<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae2b7cf124993ee7a0eafb4f57e377670" kindref="member">counts</ref>.data(),<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1a40daa79cafd7c32906a0e0fd08825250" kindref="member">numcnt</ref>,<sp/>MPI_UNSIGNED,<sp/>MPI_SUM,<sp/>MPI_COMM_WORLD);</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_disk2d_halo_1_1_gen_phi_1acaa1e4d39a51c95827b51489ad86e802" kindref="member">numtot</ref>,<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae04d2084975d7fdf2447f6814c6d1415" kindref="member">numbar</ref>,<sp/><ref refid="class_disk2d_halo_1_1_gen_phi_1ae2b7cf124993ee7a0eafb4f57e377670" kindref="member">counts</ref>};</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220" refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a219c64c412e54700dd4e0d8692e395bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" kindref="member">DiskGenType</ref><sp/>{<sp/><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a3aa8cd1980670f058bd5fe5f8cb1df89" kindref="member">Jeans</ref>,<sp/><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a219c64c412e54700dd4e0d8692e395bc" kindref="member">Asymmetric</ref>,<sp/><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a92c6632d299e44390ad47aad42671824" kindref="member">Epicyclic</ref><sp/>};</highlight></codeline>
-<codeline lineno="221" refid="class_disk2d_halo_1a9a0a0a509b409f46d4882525008a43d3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::map&lt;std::string,<sp/>DiskGenType&gt;<sp/><ref refid="class_disk2d_halo_1a9a0a0a509b409f46d4882525008a43d3" kindref="member">getDiskGenType</ref>;</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"></highlight></codeline>
-<codeline lineno="223" refid="class_disk2d_halo_1ae5fba19fae3fc3e72eb117a2ac39531e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ae5fba19fae3fc3e72eb117a2ac39531e" kindref="member">NDP</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>disk<sp/>table<sp/>phi<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>16</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="225"><highlight class="normal"></highlight></codeline>
-<codeline lineno="226" refid="class_disk2d_halo_1a7fd790abd005811091d28e8d1d960adb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a7fd790abd005811091d28e8d1d960adb" kindref="member">NDZ</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>disk<sp/>table<sp/>z<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>200</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="228"><highlight class="normal"></highlight></codeline>
-<codeline lineno="229" refid="class_disk2d_halo_1ac6dc73df752a1d71faa331ac5a35a031" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ac6dc73df752a1d71faa331ac5a35a031" kindref="member">NDR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>disk<sp/>table<sp/>R<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>40</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="231"><highlight class="normal"></highlight></codeline>
-<codeline lineno="232" refid="class_disk2d_halo_1a27e0ab15c73f135097d5ffe823bebe0e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a27e0ab15c73f135097d5ffe823bebe0e" kindref="member">NHR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>halo<sp/>table<sp/>r<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>40</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235" refid="class_disk2d_halo_1adac942d7d49a8a3d0acb553c8dbc439b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1adac942d7d49a8a3d0acb553c8dbc439b" kindref="member">NHT</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>halo<sp/>table<sp/>theta<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>40</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="238" refid="class_disk2d_halo_1a771c960b9acbb3def41209b233d90c51" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a771c960b9acbb3def41209b233d90c51" kindref="member">RHMIN</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Smallest<sp/>radius<sp/>in<sp/>halo<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="239"><highlight class="normal"></highlight></codeline>
-<codeline lineno="240" refid="class_disk2d_halo_1a4425b5b398bb6e230d864f856b1b4f01" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a4425b5b398bb6e230d864f856b1b4f01" kindref="member">RHMAX</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Largest<sp/>radius<sp/>in<sp/>halo<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="normal"></highlight></codeline>
-<codeline lineno="242" refid="class_disk2d_halo_1a5fd5c3ae3d88299dc74698fec59ad7a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a5fd5c3ae3d88299dc74698fec59ad7a4" kindref="member">RDMIN</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Smallest<sp/>radius<sp/>in<sp/>disk<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244" refid="class_disk2d_halo_1a79d158c80fe187bba86a1bb34dd9de57" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a79d158c80fe187bba86a1bb34dd9de57" kindref="member">RDMAX</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Largest<sp/>radius<sp/>in<sp/>disk<sp/>grid<sp/>&amp;<sp/>model</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="246" refid="class_disk2d_halo_1a4585be65d2898fa4d7e737f07281ef1b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a4585be65d2898fa4d7e737f07281ef1b" kindref="member">COMPRESSION</ref>;<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Extra<sp/>effective<sp/>mass<sp/>due<sp/>to<sp/>disk</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>1.0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight></codeline>
-<codeline lineno="249" refid="class_disk2d_halo_1a8e4323d066057ac696b92b0f30b9eae9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a8e4323d066057ac696b92b0f30b9eae9" kindref="member">SHFACTOR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Minimum<sp/>vertical<sp/>integration<sp/>size</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>in<sp/>units<sp/>of<sp/>scale<sp/>height</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="251"><highlight class="normal"></highlight></codeline>
-<codeline lineno="252" refid="class_disk2d_halo_1aaf6067d1d0a1acbe654fd4d2a681910d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1aaf6067d1d0a1acbe654fd4d2a681910d" kindref="member">TOLE</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Energy<sp/>offset<sp/>for<sp/>particle<sp/>selection</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>0.003</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="254"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255" refid="class_disk2d_halo_1a0ed20f3f288b7db27b0da796a08ce4fb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a0ed20f3f288b7db27b0da796a08ce4fb" kindref="member">Q</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Toomre<sp/>Q.<sp/><sp/>Default:<sp/>0.0<sp/>(use</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>exponential)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="257"><highlight class="normal"></highlight></codeline>
-<codeline lineno="258" refid="class_disk2d_halo_1a32e2546bd93e54ab078bdb7c7c6c8cad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a32e2546bd93e54ab078bdb7c7c6c8cad" kindref="member">XI</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Ratio<sp/>of<sp/>radial<sp/>to<sp/>tangential</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>velocity<sp/>dispersion<sp/>scale</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>length.<sp/>Default:<sp/>1.0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="261"><highlight class="normal"></highlight></codeline>
-<codeline lineno="262" refid="class_disk2d_halo_1abc612ed1578ad3decc681cb823cd23d7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1abc612ed1578ad3decc681cb823cd23d7" kindref="member">SIG0</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Velocity<sp/>dispersion<sp/>fraction<sp/>at<sp/>a</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>scale<sp/>length.<sp/>Default:<sp/>0.1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="265" refid="class_disk2d_halo_1a8b4c63eca88458f445ae99220adf71a5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a8b4c63eca88458f445ae99220adf71a5" kindref="member">MPERT</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Harmonic<sp/>perturbation<sp/>order.<sp/>Default:<sp/>2</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="267" refid="class_disk2d_halo_1a0afa564c82e23151758e82b77f0a70a3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a0afa564c82e23151758e82b77f0a70a3" kindref="member">AMPL</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Harmonic<sp/>amplitude.<sp/><sp/>Default:<sp/>0.0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="268"><highlight class="normal"></highlight></codeline>
-<codeline lineno="269" refid="class_disk2d_halo_1aace0c0e6e9a7c43359fbd356b3d318ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1aace0c0e6e9a7c43359fbd356b3d318ac" kindref="member">R_DF</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Change<sp/>over<sp/>points<sp/>for<sp/>DF<sp/>and<sp/>Jeans</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="270" refid="class_disk2d_halo_1aae08f63c0520ea4418c47bb373a8c695" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1aae08f63c0520ea4418c47bb373a8c695" kindref="member">DR_DF</ref>;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"></highlight></codeline>
-<codeline lineno="272" refid="class_disk2d_halo_1ae002c8f2cc3d2f072119f7c82f346d31" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ae002c8f2cc3d2f072119f7c82f346d31" kindref="member">NBUF</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>particles<sp/>in<sp/>MPI<sp/>buffer</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>default:<sp/>8192</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="274"><highlight class="normal"></highlight></codeline>
-<codeline lineno="275" refid="class_disk2d_halo_1a89821f2a6fcb4ec92773373d8801257f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a89821f2a6fcb4ec92773373d8801257f" kindref="member">LOGR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Radial<sp/>grid<sp/>for<sp/>Eddington<sp/>inversion</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="276"><highlight class="normal"></highlight></codeline>
-<codeline lineno="277" refid="class_disk2d_halo_1ab3495606026ceb6b8a0732f96216cfee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ab3495606026ceb6b8a0732f96216cfee" kindref="member">CHEBY</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>Cheybshev<sp/>fit<sp/>for<sp/>epicylic<sp/>derivatives</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="278"><highlight class="normal"></highlight></codeline>
-<codeline lineno="279" refid="class_disk2d_halo_1aa49662d0c9f9f4ce956a54414016efde" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_halo_1aa49662d0c9f9f4ce956a54414016efde" kindref="member">NCHEB</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Order<sp/>for<sp/>Cheybshev<sp/>fit</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="280"><highlight class="normal"></highlight></codeline>
-<codeline lineno="281" refid="class_disk2d_halo_1acb834c5dc47c2f19d6e68e055659e5a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1acb834c5dc47c2f19d6e68e055659e5a7" kindref="member">ALLOW</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Turn<sp/>off<sp/>negative<sp/>mass<sp/>requeueing<sp/>in</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>multimass<sp/>model</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="283"><highlight class="normal"></highlight></codeline>
-<codeline lineno="284" refid="class_disk2d_halo_1a1510ea1c4e4f7aa1d4f9cedb796cf9da" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a1510ea1c4e4f7aa1d4f9cedb796cf9da" kindref="member">SEED</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Initial<sp/>seed</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="285"><highlight class="normal"></highlight></codeline>
-<codeline lineno="286"><highlight class="normal"></highlight></codeline>
-<codeline lineno="287" refid="class_disk2d_halo_1a861bd21da9c03bf5f5da2acd7c8814aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a861bd21da9c03bf5f5da2acd7c8814aa" kindref="member">ITMAX</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Maximum<sp/>number<sp/>of<sp/>DF<sp/>iterations</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="288"><highlight class="normal"></highlight></codeline>
-<codeline lineno="289" refid="class_disk2d_halo_1a7ce1ebe51b504acbce6422322ee1e1b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a7ce1ebe51b504acbce6422322ee1e1b3" kindref="member">use_mono</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>monopole<sp/>approximation<sp/>for</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>computing<sp/>total<sp/>d(phi)/dr</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="291"><highlight class="normal"></highlight></codeline>
-<codeline lineno="292" refid="class_disk2d_halo_1a535c9bc2fcea3e1be4d60668344d0392" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a535c9bc2fcea3e1be4d60668344d0392" kindref="member">RA</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Anisotropy<sp/>radius<sp/>(default:<sp/>1e20)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="293"><highlight class="normal"></highlight></codeline>
-<codeline lineno="294" refid="class_disk2d_halo_1ac5e7d190a7e92c53cd9d2b1ec01d7fe6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ac5e7d190a7e92c53cd9d2b1ec01d7fe6" kindref="member">NUMDF</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>DF<sp/>grid<sp/>points<sp/>(default:<sp/>1200)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="295"><highlight class="normal"></highlight></codeline>
-<codeline lineno="296" refid="class_disk2d_halo_1ab4923e334da0e1b0a1c464a1c4411910" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ab4923e334da0e1b0a1c464a1c4411910" kindref="member">RNUM</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>model<sp/>grid<sp/>points<sp/>for<sp/>added</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>component<sp/>(default:<sp/>1000)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="298"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299" refid="class_disk2d_halo_1aa7de34484f5fcd24566a3f4e1770384f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1aa7de34484f5fcd24566a3f4e1770384f" kindref="member">VFLAG</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Verbose<sp/>debugging<sp/>flags</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Bit<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Action</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>---<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>1<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Informational</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>2<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Model<sp/>diagnostics</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>4<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Table<sp/>diagnostics</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>8<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Velocity<sp/>diagnostics</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="307"><highlight class="normal"></highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>ID<sp/>string<sp/>for<sp/>debugging<sp/>output</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="309" refid="class_disk2d_halo_1a46646f3c35ad4a60d43cb178bd3fb8c7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a46646f3c35ad4a60d43cb178bd3fb8c7" kindref="member">RUNTAG</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>&quot;debug&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="310"><highlight class="normal"></highlight></codeline>
-<codeline lineno="312" refid="class_disk2d_halo_1a6abe14066316591dc03228df6e4eb01f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_halo_1a6abe14066316591dc03228df6e4eb01f" kindref="member">Disk2dHalo</ref>();</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"></highlight></codeline>
-<codeline lineno="315" refid="class_disk2d_halo_1a8ab11a477acb1d026955c1e9eafe46e5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_halo_1a8ab11a477acb1d026955c1e9eafe46e5" kindref="member">Disk2dHalo</ref>(<ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref><sp/><ref refid="class_disk2d_halo_1a8350e57b15125129caa9f3e11b76f303" kindref="member">expandh</ref>,<sp/>std::shared_ptr&lt;Disk2d&gt;<sp/><ref refid="class_disk2d_halo_1a5b91883c45e87a744bffd9f9fa67d294" kindref="member">expandd</ref>,</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DMass,<sp/>std::string<sp/>maptype,</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>filename,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a9c86a0d338b838f9a61b17eb20669c85" kindref="member">DF</ref>=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE=0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC=1.0,</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" kindref="member">DiskGenType</ref><sp/><ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>=<ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a219c64c412e54700dd4e0d8692e395bc" kindref="member">Asymmetric</ref>);</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"></highlight></codeline>
-<codeline lineno="321" refid="class_disk2d_halo_1a762ed3371e74b8e592fd50c1983187d3" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_halo_1a762ed3371e74b8e592fd50c1983187d3" kindref="member">Disk2dHalo</ref>(<ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref><sp/>haloexp,<sp/>std::shared_ptr&lt;Disk2d&gt;<sp/>diskexp,</highlight></codeline>
-<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DMass,<sp/>std::string<sp/>maptype,</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>filename1,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE,<sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC,</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>filename2,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE2,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC2,</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" kindref="member">DiskGenType</ref><sp/><ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>=<ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a219c64c412e54700dd4e0d8692e395bc" kindref="member">Asymmetric</ref>);</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"></highlight></codeline>
-<codeline lineno="328" refid="class_disk2d_halo_1ab959628bff1bcfbfd105eefb38ad0bce" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_halo_1ab959628bff1bcfbfd105eefb38ad0bce" kindref="member">Disk2dHalo</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo" kindref="compound">Disk2dHalo</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"></highlight></codeline>
-<codeline lineno="331" refid="class_disk2d_halo_1a383e56000c197c58728676c551155e53" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_halo_1a383e56000c197c58728676c551155e53" kindref="member">~Disk2dHalo</ref>();</highlight></codeline>
-<codeline lineno="332"><highlight class="normal"></highlight></codeline>
-<codeline lineno="333" refid="class_disk2d_halo_1a3a5efc26198b32983456eab95e22d9ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a3a5efc26198b32983456eab95e22d9ac" kindref="member">set_halo</ref>(vector&lt;Particle&gt;&amp;<sp/>phalo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nhalo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>npart);</highlight></codeline>
-<codeline lineno="334" refid="class_disk2d_halo_1a751eca056421ca48114b140539f391a3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a751eca056421ca48114b140539f391a3" kindref="member">set_halo_coordinates</ref>(vector&lt;Particle&gt;&amp;<sp/>phalo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nhalo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>npart);</highlight></codeline>
-<codeline lineno="335" refid="class_disk2d_halo_1a51494697140bcbba6140b819d87c8100" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a51494697140bcbba6140b819d87c8100" kindref="member">set_disk_coordinates</ref>(vector&lt;Particle&gt;&amp;<sp/>pdisk,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ndisk,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>npart);</highlight></codeline>
-<codeline lineno="336"><highlight class="normal"></highlight></codeline>
-<codeline lineno="337" refid="class_disk2d_halo_1a392f416aaabd3c0fbc914cc53853f4a5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a392f416aaabd3c0fbc914cc53853f4a5" kindref="member">set_halo_table_single</ref>(vector&lt;Particle&gt;&amp;<sp/>phalo);</highlight></codeline>
-<codeline lineno="338" refid="class_disk2d_halo_1a18c875bf8c196b7c88de70fcffa356ab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a18c875bf8c196b7c88de70fcffa356ab" kindref="member">set_halo_table_multi</ref><sp/>(vector&lt;Particle&gt;&amp;<sp/>phalo);</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"></highlight></codeline>
-<codeline lineno="340" refid="class_disk2d_halo_1ae0c5d8ef22780052a81fedec8e881681" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ae0c5d8ef22780052a81fedec8e881681" kindref="member">set_pos_origin</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>z)<sp/></highlight></codeline>
-<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a80d992e2decf960cbbe756ef8a98bf5b" kindref="member">center_pos</ref>[0]<sp/>=<sp/>x;</highlight></codeline>
-<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a80d992e2decf960cbbe756ef8a98bf5b" kindref="member">center_pos</ref>[1]<sp/>=<sp/>y;</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a80d992e2decf960cbbe756ef8a98bf5b" kindref="member">center_pos</ref>[2]<sp/>=<sp/>z;</highlight></codeline>
-<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"></highlight></codeline>
-<codeline lineno="347" refid="class_disk2d_halo_1ae4dca59edeca9643c49eb5c60a1eece4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ae4dca59edeca9643c49eb5c60a1eece4" kindref="member">set_vel_origin</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>z)<sp/></highlight></codeline>
-<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a023c6aed59a7bc2415feaa05b16b314d" kindref="member">center_vel</ref>[0]<sp/>=<sp/>x;</highlight></codeline>
-<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a023c6aed59a7bc2415feaa05b16b314d" kindref="member">center_vel</ref>[1]<sp/>=<sp/>y;</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk2d_halo_1a023c6aed59a7bc2415feaa05b16b314d" kindref="member">center_vel</ref>[2]<sp/>=<sp/>z;</highlight></codeline>
-<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="353"><highlight class="normal"></highlight></codeline>
-<codeline lineno="354" refid="class_disk2d_halo_1a72625558bc1844dce0ef34ee68b88ecf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a72625558bc1844dce0ef34ee68b88ecf" kindref="member">get_hpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="355"><highlight class="normal"></highlight></codeline>
-<codeline lineno="356" refid="class_disk2d_halo_1a1a16635bb6b36768590947cc280f9ae3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a1a16635bb6b36768590947cc280f9ae3" kindref="member">get_dpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="357"><highlight class="normal"></highlight></codeline>
-<codeline lineno="358" refid="class_disk2d_halo_1a3fe54139be2c79c8a8eb5d8cd76afcee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a3fe54139be2c79c8a8eb5d8cd76afcee" kindref="member">get_hdpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"></highlight></codeline>
-<codeline lineno="360" refid="class_disk2d_halo_1a1964dd55e3844129a625a4443ddce107" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a1964dd55e3844129a625a4443ddce107" kindref="member">get_ddpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="361"><highlight class="normal"></highlight></codeline>
-<codeline lineno="362" refid="class_disk2d_halo_1a261c657b29ee272c47cf9699c916097c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a261c657b29ee272c47cf9699c916097c" kindref="member">deri_pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="363"><highlight class="normal"></highlight></codeline>
-<codeline lineno="364" refid="class_disk2d_halo_1a000b3a9f3ae3090109472cab16b1b244" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a000b3a9f3ae3090109472cab16b1b244" kindref="member">deri_pot_disk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="365"><highlight class="normal"></highlight></codeline>
-<codeline lineno="366" refid="class_disk2d_halo_1abfa7605b61ef1f0818bfa2eb9ff9dd8b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1abfa7605b61ef1f0818bfa2eb9ff9dd8b" kindref="member">deri_pot_halo</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="367"><highlight class="normal"></highlight></codeline>
-<codeline lineno="368" refid="class_disk2d_halo_1a0a5d8952aef149048f2c578626555d8e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a0a5d8952aef149048f2c578626555d8e" kindref="member">disk_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;fr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;fz,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;fp);</highlight></codeline>
-<codeline lineno="370"><highlight class="normal"></highlight></codeline>
-<codeline lineno="371" refid="class_disk2d_halo_1a31b3ac25c42a8c92867e100f968d5c4e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a31b3ac25c42a8c92867e100f968d5c4e" kindref="member">epi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="372"><highlight class="normal"></highlight></codeline>
-<codeline lineno="373" refid="class_disk2d_halo_1a142bfdb8a9434befd7d62f52df326255" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a142bfdb8a9434befd7d62f52df326255" kindref="member">table_disk</ref>(vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="374"><highlight class="normal"></highlight></codeline>
-<codeline lineno="375" refid="class_disk2d_halo_1aba5f372e270f6d163048557e4b72ab36" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1aba5f372e270f6d163048557e4b72ab36" kindref="member">vr_disp2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="376"><highlight class="normal"></highlight></codeline>
-<codeline lineno="377" refid="class_disk2d_halo_1a22f257cff85d0d5a62bd5762d0f90c91" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a22f257cff85d0d5a62bd5762d0f90c91" kindref="member">a_drift</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="378"><highlight class="normal"></highlight></codeline>
-<codeline lineno="379" refid="class_disk2d_halo_1ac886c6bca155ad70bbf89d0ff5e9cdaf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ac886c6bca155ad70bbf89d0ff5e9cdaf" kindref="member">vp_disp2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="380"><highlight class="normal"></highlight></codeline>
-<codeline lineno="381" refid="class_disk2d_halo_1a8dfec313da40e7f902a56df55d83ece1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a8dfec313da40e7f902a56df55d83ece1" kindref="member">v_circ</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="382"><highlight class="normal"></highlight></codeline>
-<codeline lineno="383" refid="class_disk2d_halo_1a3fd2f1cb256cfccf56a89b90b86e9e02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a3fd2f1cb256cfccf56a89b90b86e9e02" kindref="member">set_vel_disk</ref>(vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"></highlight></codeline>
-<codeline lineno="385" refid="class_disk2d_halo_1ab7ac73679402f42c4677bbbcb19f1b42" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ab7ac73679402f42c4677bbbcb19f1b42" kindref="member">table_halo</ref>(vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="386"><highlight class="normal"></highlight></codeline>
-<codeline lineno="387" refid="class_disk2d_halo_1aabe42034291091acca4d9cae7d5dde66" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1aabe42034291091acca4d9cae7d5dde66" kindref="member">get_disp</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="388"><highlight class="normal"></highlight></codeline>
-<codeline lineno="389" refid="class_disk2d_halo_1a08acff9b7fe0e25d0c5107a3edd7227d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a08acff9b7fe0e25d0c5107a3edd7227d" kindref="member">set_vel_halo</ref>(vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"></highlight></codeline>
-<codeline lineno="391" refid="class_disk2d_halo_1aa52542534dc4acf5f595073f3a04fbc2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1aa52542534dc4acf5f595073f3a04fbc2" kindref="member">write_file</ref>(ostream<sp/>&amp;fou,<sp/>vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"></highlight></codeline>
-<codeline lineno="393" refid="class_disk2d_halo_1a1051d440e8e931f67938a3aca2de8635" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a1051d440e8e931f67938a3aca2de8635" kindref="member">virial_ratio</ref>(vector&lt;Particle&gt;&amp;<sp/>hpart,<sp/>vector&lt;Particle&gt;&amp;<sp/>dpart);</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"></highlight></codeline>
-<codeline lineno="395" refid="class_disk2d_halo_1ac2af1c4f356d0ab0ffc9fe3801e82d5a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1ac2af1c4f356d0ab0ffc9fe3801e82d5a" kindref="member">virial_ratio</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"></highlight></codeline>
-<codeline lineno="397" refid="class_disk2d_halo_1afeac7b1385458b2efc656dc8d8f3ef5f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1afeac7b1385458b2efc656dc8d8f3ef5f" kindref="member">zero_com</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>val)<sp/>{<sp/><ref refid="class_disk2d_halo_1a842077a0af4b18292e76ffe2ecb00990" kindref="member">com</ref><sp/>=<sp/>val;<sp/>}</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight></codeline>
-<codeline lineno="399" refid="class_disk2d_halo_1a3df7adcdffad207c62b5f1309a4aa097" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a3df7adcdffad207c62b5f1309a4aa097" kindref="member">zero_cov</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>val)<sp/>{<sp/><ref refid="class_disk2d_halo_1a25befa93079bf570ff1a2501df06241c" kindref="member">cov</ref><sp/>=<sp/>val;<sp/>}</highlight></codeline>
-<codeline lineno="400"><highlight class="normal"></highlight></codeline>
-<codeline lineno="401" refid="class_disk2d_halo_1a630fd67abfbc78eb4be566941561a445" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1a630fd67abfbc78eb4be566941561a445" kindref="member">profile</ref>(std::ostream<sp/>&amp;rotfile,<sp/>vector&lt;Particle&gt;&amp;<sp/>dpart,</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numr);</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"></highlight></codeline>
-<codeline lineno="404" refid="class_disk2d_halo_1afe9498d2f01340d2a0b8442199b07d6e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk2d_halo_1afe9498d2f01340d2a0b8442199b07d6e" kindref="member">disk_model</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;modfile);</highlight></codeline>
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-<codeline lineno="406"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="407" refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" kindref="member">DiskGenType</ref><sp/><ref refid="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" kindref="member">type</ref>;</highlight></codeline>
-<codeline lineno="408"><highlight class="normal"></highlight></codeline>
-<codeline lineno="409"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="410"><highlight class="normal"></highlight></codeline>
-<codeline lineno="411"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="412"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H"/>
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diff --git a/doxyxml/_disk_density_func_8_h.xml b/doxyxml/_disk_density_func_8_h.xml
deleted file mode 100644
index e58f5f2..0000000
--- a/doxyxml/_disk_density_func_8_h.xml
+++ /dev/null
@@ -1,87 +0,0 @@
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_DiskDensityFunc_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_DiskDensityFunc_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;functional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;pybind11/pybind11.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;pybind11/embed.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">__attribute__((visibility(</highlight><highlight class="stringliteral">&quot;default&quot;</highlight><highlight class="normal">)))</highlight></codeline>
-<codeline lineno="34"><highlight class="normal">DiskDensityFunc</highlight></codeline>
-<codeline lineno="35"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="39"><highlight class="normal"><sp/><sp/>pybind11::function<sp/>disk_density;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>started<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/>std::string<sp/>funcname;</highlight></codeline>
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-<codeline lineno="47"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/>DiskDensityFunc(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>modulename,</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>funcname=</highlight><highlight class="stringliteral">&quot;disk_density&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/>~DiskDensityFunc();</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>operator()<sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/DiskDensityFunc.H"/>
-  </compounddef>
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diff --git a/doxyxml/_disk_eval_8_h.xml b/doxyxml/_disk_eval_8_h.xml
deleted file mode 100644
index 0193b29..0000000
--- a/doxyxml/_disk_eval_8_h.xml
+++ /dev/null
@@ -1,524 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_disk_eval_8_h" kind="file" language="C++">
-    <compoundname>DiskEval.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">cstdlib</includes>
-    <includes local="no">fstream</includes>
-    <includes local="no">sstream</includes>
-    <includes local="no">cstring</includes>
-    <includes local="no">string</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">cmath</includes>
-    <includes local="no">tuple</includes>
-    <includes refid="numerical_8_h" local="no">numerical.H</includes>
-    <includes refid="gauss_q_8_h" local="no">gaussQ.H</includes>
-    <includes refid="_emp_cyl_s_l_8_h" local="no">EmpCylSL.H</includes>
-    <includes refid="_disk_models_8_h" local="no">DiskModels.H</includes>
-    <includes local="no">config_exp.h</includes>
-    <incdepgraph>
-      <node id="42">
-        <label>DiskDensityFunc.H</label>
-        <link refid="_disk_density_func_8_h"/>
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-        <childnode refid="43" relation="include">
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-      <node id="41">
-        <label>DiskModels.H</label>
-        <link refid="_disk_models_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-      </node>
-      <node id="36">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="32" relation="include">
-        </childnode>
-      </node>
-      <node id="16">
-        <label>EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="13" relation="include">
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-        <childnode refid="39" relation="include">
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-      </node>
-      <node id="21">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
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-        <childnode refid="22" relation="include">
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-        <childnode refid="8" relation="include">
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-      <node id="25">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
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-      </node>
-      <node id="35">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
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-        </childnode>
-        <childnode refid="8" relation="include">
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-        </childnode>
-        <childnode refid="34" relation="include">
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-      </node>
-      <node id="27">
-        <label>SLGridMP2.H</label>
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-        </childnode>
-        <childnode refid="2" relation="include">
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-        <label>Timer.H</label>
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-        </childnode>
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-        </childnode>
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-        </childnode>
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-        <label>Eigen/Eigen</label>
-      </node>
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-        <label>cmath</label>
-      </node>
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-        <label>config_exp.h</label>
-      </node>
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-        <label>cstdlib</label>
-      </node>
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-        <label>cstring</label>
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-        <label>limits</label>
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-      </node>
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-      </node>
-    </incdepgraph>
-    <innerclass refid="class_disk_eval" prot="public">DiskEval</innerclass>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="_disk_eval_8_h_1a8ed48869a8e12ee6a57c5387755e58fa" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double dplgndr</definition>
-        <argsstring>(int l, int m, double x)</argsstring>
-        <name>dplgndr</name>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="29" column="8" declfile="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" declline="29" declcolumn="8"/>
-        <referencedby refid="class_disk_eval_1a6c804ad0c72216520e6981f04b6f39d6" compoundref="_disk_eval_8_h" startline="110" endline="121">DiskEval::Zlm</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="_disk_eval_8_h_1aa779218c2cd573c2cb55bb571cd42329" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double plgndr</definition>
-        <argsstring>(int l, int m, double x)</argsstring>
-        <name>plgndr</name>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="28" column="9" declfile="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" declline="28" declcolumn="9"/>
-        <referencedby refid="class_disk_eval_1afd9313b2e6bb8a709e56614072a31306" compoundref="_disk_eval_8_h" startline="99" endline="107">DiskEval::Ylm</referencedby>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>Do<sp/>multipole<sp/>evaluation<sp/>of<sp/>3-dimensional<sp/>axisymmetric<sp/>disk<sp/>density</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_DiskEval_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_DiskEval_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>C++/STL<sp/>headers</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstdlib&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;sstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstring&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;tuple&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="comment">//<sp/>MDW<sp/>classes</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="numerical_8_h" kindref="compound">numerical.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="gauss_q_8_h" kindref="compound">gaussQ.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_emp_cyl_s_l_8_h" kindref="compound">EmpCylSL.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_disk_models_8_h" kindref="compound">DiskModels.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="_disk_eval_8_h_1aa779218c2cd573c2cb55bb571cd42329" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><sp/><ref refid="_disk_eval_8_h_1aa779218c2cd573c2cb55bb571cd42329" kindref="member">plgndr</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="29" refid="_disk_eval_8_h_1a8ed48869a8e12ee6a57c5387755e58fa" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="_disk_eval_8_h_1a8ed48869a8e12ee6a57c5387755e58fa" kindref="member">dplgndr</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73" refid="class_disk_eval" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk_eval" kindref="compound">DiskEval</ref></highlight></codeline>
-<codeline lineno="74"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="76" refid="class_disk_eval_1a3ffe9dfcbe9afcc38ce44d6844d2067d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1a686c18b7deb23a96b0608d96a7d13164" kindref="member">EmpCylSL::AxiDiskPtr</ref><sp/><ref refid="class_disk_eval_1a3ffe9dfcbe9afcc38ce44d6844d2067d" kindref="member">model</ref>;</highlight></codeline>
-<codeline lineno="77" refid="class_disk_eval_1a468e64722f6a660cfbee701d2d7deb4b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_eval_1a1f0cd262d36bc29dde3e42efc1f471d8" kindref="member">xmin</ref>,<sp/><ref refid="class_disk_eval_1a50f747dbf3e409c37c424ec15fe7b060" kindref="member">xmax</ref>,<sp/><ref refid="class_disk_eval_1aa7d9f20640072144f3ccbe2793127a8c" kindref="member">dx</ref>,<sp/><ref refid="class_disk_eval_1a468e64722f6a660cfbee701d2d7deb4b" kindref="member">ascl</ref>;</highlight></codeline>
-<codeline lineno="78" refid="class_disk_eval_1a07a14f99df80b07aca77ef70cb362a15" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_eval_1a07a14f99df80b07aca77ef70cb362a15" kindref="member">lmax</ref>,<sp/><ref refid="class_disk_eval_1a17099b805a674d5327d11a93b8ee7487" kindref="member">numr</ref>;</highlight></codeline>
-<codeline lineno="79" refid="class_disk_eval_1a4d7b296868f95b0c7008cbde2779ba25" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_disk_eval_1a4d7b296868f95b0c7008cbde2779ba25" kindref="member">logr</ref>,<sp/><ref refid="class_disk_eval_1a2371913d523ac9a51d9a66bdbf677566" kindref="member">xscl</ref>;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81" refid="class_disk_eval_1ad9c11dc30d6bbf9c7466e758e5365394" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_disk_eval_1ad9c11dc30d6bbf9c7466e758e5365394" kindref="member">cachefile</ref>;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//std::vector&lt;<sp/>std::vector&lt;double&gt;<sp/>&gt;<sp/>rho,<sp/>T1,<sp/>T2;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_disk_eval_1a6478dc29d714013eb6ae122dd5d2f725" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;<sp/>std::vector&lt;double&gt;<sp/>&gt;<sp/>&gt;<sp/><ref refid="class_disk_eval_1a6478dc29d714013eb6ae122dd5d2f725" kindref="member">rho</ref>,<sp/><ref refid="class_disk_eval_1ad9a6d11cf445bc90b38854568c1d0e56" kindref="member">T1</ref>,<sp/><ref refid="class_disk_eval_1ab0ae8955161880282a16bf606ad9c363" kindref="member">T2</ref>;</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>CAUTION:<sp/>this<sp/>will<sp/>fail<sp/>at<sp/>l&gt;150<sp/>owing<sp/>to<sp/>double<sp/>precision<sp/>issues<sp/>in<sp/>exp<sp/>call.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_disk_eval_1ab55a4bdf8879821d2a6fd4e4b1e6761e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_eval_1ab55a4bdf8879821d2a6fd4e4b1e6761e" kindref="member">Nlm</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m)</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>sqrt(<sp/>(2.0*l+1.0)/(4.0*M_PI)<sp/>)<sp/>*<sp/></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>exp(0.5*(lgamma(1.0+l-m)<sp/>-<sp/>lgamma(1.0+l+m)));</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>CAUTION:<sp/>this<sp/>will<sp/>fail<sp/>at<sp/>l&gt;150<sp/>owing<sp/>to<sp/>double<sp/>precision<sp/>issues.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_disk_eval_1afd9313b2e6bb8a709e56614072a31306" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_eval_1afd9313b2e6bb8a709e56614072a31306" kindref="member">Ylm</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>cosx)</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M<sp/>=<sp/>abs(m);</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>plm<sp/>=<sp/><ref refid="_disk_eval_8_h_1aa779218c2cd573c2cb55bb571cd42329" kindref="member">plgndr</ref>(l,<sp/>M,<sp/>cosx);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(std::isnan(plm)<sp/>or<sp/>std::isinf(plm))</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Failure<sp/>in<sp/>pldndr<sp/>at<sp/>l=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>l</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>m=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>m<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>cosx=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>cosx<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_eval_1ab55a4bdf8879821d2a6fd4e4b1e6761e" kindref="member">Nlm</ref>(l,<sp/>M)<sp/>*<sp/>plm<sp/>*<sp/>pow(-1.0,<sp/>M);</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="class_disk_eval_1a6c804ad0c72216520e6981f04b6f39d6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_eval_1a6c804ad0c72216520e6981f04b6f39d6" kindref="member">Zlm</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>cosx)</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(l==0<sp/>or<sp/>fabs(cosx)&gt;=1.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M<sp/>=<sp/>abs(m);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dplm<sp/>=<sp/><ref refid="_disk_eval_8_h_1a8ed48869a8e12ee6a57c5387755e58fa" kindref="member">dplgndr</ref>(l,<sp/>M,<sp/>cosx);</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(std::isnan(dplm)<sp/>or<sp/>std::isinf(dplm))</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Failure<sp/>in<sp/>pldndr<sp/>at<sp/>l=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>l</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>m=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>m<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>cosx=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>cosx<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_disk_eval_1ab55a4bdf8879821d2a6fd4e4b1e6761e" kindref="member">Nlm</ref>(l,<sp/>M)<sp/>*<sp/>dplm<sp/>*<sp/>pow(-1.0,<sp/>M)<sp/>*<sp/>sqrt(1.0<sp/>-<sp/>cosx*cosx);</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
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diff --git a/doxyxml/_disk_halo_8_h.xml b/doxyxml/_disk_halo_8_h.xml
deleted file mode 100644
index 170d4e2..0000000
--- a/doxyxml/_disk_halo_8_h.xml
+++ /dev/null
@@ -1,712 +0,0 @@
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-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="gauss_q_8_h" kindref="compound">gaussQ.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="localmpi_8_h" kindref="compound">localmpi.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_add_disk_8_h" kindref="compound">AddDisk.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_spherical_s_l_8_h" kindref="compound">SphericalSL.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_emp_cyl_s_l_8_h" kindref="compound">EmpCylSL.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_s_particle_8_h" kindref="compound">SParticle.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="libvars_8_h" kindref="compound">libvars.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="class_disk_halo_exception" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk_halo_exception" kindref="compound">DiskHaloException</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::runtime_error</highlight></codeline>
-<codeline lineno="24"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_disk_halo_exception_1ac8dfd37ff38e420395484b1de34c8055" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_halo_exception_1ac8dfd37ff38e420395484b1de34c8055" kindref="member">DiskHaloException</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>message,<sp/></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>sourcefilename,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sourcelinenumber)<sp/></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/>runtime_error(message)<sp/></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/>cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Thrown<sp/>from<sp/>source<sp/>file<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/><sp/>&lt;&lt;<sp/>message<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;<sp/>at<sp/>line<sp/>number<sp/>&lt;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>sourcelinenumber<sp/>&lt;&lt;<sp/>endl;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="34"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_disk_halo" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk_halo" kindref="compound">DiskHalo</ref></highlight></codeline>
-<codeline lineno="37"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="39" refid="class_disk_halo_1a1e59a2417dd9dbc4b78fca23e22268a0" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;AddDisk&gt;<sp/><ref refid="class_disk_halo_1a1e59a2417dd9dbc4b78fca23e22268a0" kindref="member">newmod</ref>;</highlight></codeline>
-<codeline lineno="40" refid="class_disk_halo_1abcbe56a6930566972f0c7ce08b37daf9" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SphericalModelTable&gt;<sp/><ref refid="class_disk_halo_1abcbe56a6930566972f0c7ce08b37daf9" kindref="member">halo</ref>,<sp/><ref refid="class_disk_halo_1a11533cc005a6b07dcbae37aa5ad01615" kindref="member">halo2</ref>,<sp/><ref refid="class_disk_halo_1a6e814f3f29455307b6bd561f9ae212f2" kindref="member">halo3</ref>;</highlight></codeline>
-<codeline lineno="41" refid="class_disk_halo_1a965f8a6dcc1614231524dd03d9185459" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SphericalModelMulti&gt;<sp/><ref refid="class_disk_halo_1a965f8a6dcc1614231524dd03d9185459" kindref="member">multi</ref>;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_disk_halo_1a8053a482accb22f54ff5d364bf2700b4" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;ExponentialDisk&gt;<sp/><ref refid="class_disk_halo_1a8053a482accb22f54ff5d364bf2700b4" kindref="member">disk</ref>;</highlight></codeline>
-<codeline lineno="44" refid="class_disk_halo_1a9dacc614aa5ba4cb332af85e5a694f0f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a0d93aba88b6ef036ab1ca7b917c05b19" kindref="member">scalelength</ref>,<sp/><ref refid="class_disk_halo_1a60b7e2735f74d6a2a877962f308f18b9" kindref="member">scaleheight</ref>,<sp/><ref refid="class_disk_halo_1a9dacc614aa5ba4cb332af85e5a694f0f" kindref="member">dmass</ref>;</highlight></codeline>
-<codeline lineno="45" refid="class_disk_halo_1ae21e949ca3cb96f7be9be2321cd25698" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ae21e949ca3cb96f7be9be2321cd25698" kindref="member">center_pos</ref>[3],<sp/><ref refid="class_disk_halo_1a07ef76d6c4dac9992219acb4d68d8ebe" kindref="member">center_vel</ref>[3];</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_disk_halo_1af8ff0dbb1f05d6fbd3bb568d3355aa62" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref><sp/><ref refid="class_disk_halo_1af8ff0dbb1f05d6fbd3bb568d3355aa62" kindref="member">expandh</ref>;</highlight></codeline>
-<codeline lineno="48" refid="class_disk_halo_1a19b6e717b6fa153ab4667ff08c5a7292" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_emp_cyl_s_l_8_h_1aa0ef74652fa64c2615c9ff54a5d9e8e2" kindref="member">EmpCylSLptr</ref><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1a19b6e717b6fa153ab4667ff08c5a7292" kindref="member">expandd</ref>;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_disk_halo_1ad8b6b7b46b33b6e187f1f6b0ffd05661" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_disk_halo_1addec04835e0622efea6d8e3c3a7b3154" kindref="member">disktableP</ref>,<sp/><ref refid="class_disk_halo_1ad8b6b7b46b33b6e187f1f6b0ffd05661" kindref="member">disktableN</ref>;</highlight></codeline>
-<codeline lineno="51" refid="class_disk_halo_1a90f39248f69d3ff532b0c432d6761d19" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_disk_halo_1a3740176841d0941ed546bfaf0103908d" kindref="member">epitable</ref>,<sp/><ref refid="class_disk_halo_1adf41d4d8ffb88f0b9a9bf3742eb1ed4e" kindref="member">dv2table</ref>,<sp/><ref refid="class_disk_halo_1a90f39248f69d3ff532b0c432d6761d19" kindref="member">asytable</ref>;</highlight></codeline>
-<codeline lineno="52" refid="class_disk_halo_1a37d12ca6ae26861d3e8bf1db62857a2d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a37d12ca6ae26861d3e8bf1db62857a2d" kindref="member">dP</ref>,<sp/><ref refid="class_disk_halo_1ab79a0012110cdc330e6980ef1133f132" kindref="member">dR</ref>,<sp/><ref refid="class_disk_halo_1a9ed06cb0e1ffad0d4358e300db25536b" kindref="member">dZ</ref>,<sp/><ref refid="class_disk_halo_1ab0b1521e2f5315db64b686b016421577" kindref="member">sigma0</ref>;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_disk_halo_1aad744bfcc7314b16b5958ca34a5db9ad" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_disk_halo_1aad744bfcc7314b16b5958ca34a5db9ad" kindref="member">halotable</ref>;</highlight></codeline>
-<codeline lineno="55" refid="class_disk_halo_1a22f7a1282b13fd66403eb2033e7e013b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a7de35ed5bb63164e000e1d69ee37ad87" kindref="member">dr</ref>,<sp/><ref refid="class_disk_halo_1a22f7a1282b13fd66403eb2033e7e013b" kindref="member">dc</ref>;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57" refid="class_disk_halo_1ad1d90a521998fcb18fec87c1a47272af" refkind="member"><highlight class="normal"><sp/><sp/>std::mt19937<sp/><ref refid="class_disk_halo_1ad1d90a521998fcb18fec87c1a47272af" kindref="member">gen</ref>;</highlight></codeline>
-<codeline lineno="58" refid="class_disk_halo_1acdd928e74da4cd3617c51dcf56cb071f" refkind="member"><highlight class="normal"><sp/><sp/>std::uniform_real_distribution&lt;&gt;<sp/><ref refid="class_disk_halo_1acdd928e74da4cd3617c51dcf56cb071f" kindref="member">rndU</ref>;</highlight></codeline>
-<codeline lineno="59" refid="class_disk_halo_1a31a1d7fc5315f52d461c4dc3740f8c26" refkind="member"><highlight class="normal"><sp/><sp/>std::normal_distribution&lt;&gt;<sp/><ref refid="class_disk_halo_1a31a1d7fc5315f52d461c4dc3740f8c26" kindref="member">rndN</ref>;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61" refid="class_disk_halo_1aeec5dcba963c3f5c4e0f579a61c133aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1aeec5dcba963c3f5c4e0f579a61c133aa" kindref="member">DF</ref>;</highlight></codeline>
-<codeline lineno="62" refid="class_disk_halo_1a07b76b82e3825f4666f9f53346793bea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a07b76b82e3825f4666f9f53346793bea" kindref="member">MULTI</ref>;</highlight></codeline>
-<codeline lineno="63" refid="class_disk_halo_1a34b17e5f5dfd9421b062d296b7838762" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a34b17e5f5dfd9421b062d296b7838762" kindref="member">com</ref>;</highlight></codeline>
-<codeline lineno="64" refid="class_disk_halo_1aaaab422ba80a90be3ccef7167b0d1512" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1aaaab422ba80a90be3ccef7167b0d1512" kindref="member">cov</ref>;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_disk_halo_1ac8711d9a0d117730c0f4e514cae02c0c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ac8711d9a0d117730c0f4e514cae02c0c" kindref="member">bunchcnt</ref><sp/>=<sp/>16384;</highlight></codeline>
-<codeline lineno="67" refid="class_disk_halo_1a6666c43554db850822dc97e073aa3f31" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a6666c43554db850822dc97e073aa3f31" kindref="member">bufcnt</ref>;</highlight></codeline>
-<codeline lineno="68" refid="class_disk_halo_1a3c56b44538cdd18eb93d2139d58fed31" refkind="member"><highlight class="normal"><sp/><sp/>std::ostringstream<sp/><ref refid="class_disk_halo_1a3c56b44538cdd18eb93d2139d58fed31" kindref="member">bufout</ref>;</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_disk_halo_1a04e4978ed6349709fcb3ea6729fe8011" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a04e4978ed6349709fcb3ea6729fe8011" kindref="member">disk_density</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="71" refid="class_disk_halo_1a56b882978dd5ef8d22460404858f3e85" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a56b882978dd5ef8d22460404858f3e85" kindref="member">disk_surface_density</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="72" refid="class_disk_halo_1a605cd4369cff6d25fd62ff90ae0aa4ff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a605cd4369cff6d25fd62ff90ae0aa4ff" kindref="member">write_record</ref>(ostream<sp/>&amp;out,<sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/>&amp;p);</highlight></codeline>
-<codeline lineno="73" refid="class_disk_halo_1a0effc015249073e1bded7dc25ed72d2d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a0effc015249073e1bded7dc25ed72d2d" kindref="member">write_record</ref>(ostream<sp/>&amp;out,<sp/><ref refid="class_particle" kindref="compound">Particle</ref><sp/>&amp;p)</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/>P(p);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1a605cd4369cff6d25fd62ff90ae0aa4ff" kindref="member">write_record</ref>(out,<sp/>P);</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="78" refid="class_disk_halo_1aceca248aeba3ea3c07760d379beb378e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1aceca248aeba3ea3c07760d379beb378e" kindref="member">flush_buffer</ref>(ostream<sp/>&amp;out);</highlight></codeline>
-<codeline lineno="79" refid="class_disk_halo_1a175925c9df4f22671efa85c0d29b93b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a175925c9df4f22671efa85c0d29b93b0" kindref="member">table_halo_disp</ref>();</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>frequency<sp/>computation</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>mass<sp/>and<sp/>number<sp/>bins,<sp/>log<sp/>spaced</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_disk_halo_1a10f803fe9e4b89fdbf0da2b182943a1d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a10f803fe9e4b89fdbf0da2b182943a1d" kindref="member">nh</ref><sp/>=<sp/>50;</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Minimum<sp/>number<sp/>on<sp/>grid<sp/>before<sp/>computing</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_disk_halo_1a130d45213d76fda36d624ff9e01ef0db" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a130d45213d76fda36d624ff9e01ef0db" kindref="member">mh</ref><sp/>=<sp/>5;</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Boundaries<sp/>and<sp/>delta</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_disk_halo_1a49bcb1fc8025ca83ea874f130190d05b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ab5d7902fd96878bcdc079f4fc1663e1f" kindref="member">hDmin</ref>,<sp/><ref refid="class_disk_halo_1a2ab9af2c6adda03e617057b33f86ae80" kindref="member">hDmax</ref>,<sp/><ref refid="class_disk_halo_1a49bcb1fc8025ca83ea874f130190d05b" kindref="member">dRh</ref>;</highlight></codeline>
-<codeline lineno="89" refid="class_disk_halo_1ae1a319cf23af0b120b1508850a717d3e" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><sp/><sp/><ref refid="class_disk_halo_1ae1a319cf23af0b120b1508850a717d3e" kindref="member">nhD</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Mass<sp/>in<sp/>bins</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="90" refid="class_disk_halo_1ad31198223e22185cde029eee0502f487" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><sp/><sp/><ref refid="class_disk_halo_1ad31198223e22185cde029eee0502f487" kindref="member">nhM</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Cumulative<sp/>mass<sp/>in<sp/>bins</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_disk_halo_1a0dba7f3b5c4d71719112a01e5aa1e9a5" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;unsigned&gt;<sp/><ref refid="class_disk_halo_1a0dba7f3b5c4d71719112a01e5aa1e9a5" kindref="member">nhN</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>in<sp/>bins</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_disk_halo_1a326d640335349492c6715d905c52ad33" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a326d640335349492c6715d905c52ad33" kindref="member">nzero</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Computed<sp/>minimum<sp/>mesh<sp/>point</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_disk_halo_1a233f9e7203da7d352b7f3cd8728250b4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a233f9e7203da7d352b7f3cd8728250b4" kindref="member">nzepi</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Computed<sp/>minimum<sp/>epi<sp/>value</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>Spline<sp/>integration<sp/>rather<sp/>than<sp/>Trapezoidal<sp/>rule</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="97" refid="class_disk_halo_1a3f01d08f0f3793460399bbc5ffbcd097" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a3f01d08f0f3793460399bbc5ffbcd097" kindref="member">use_spline</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_disk_halo_1_1_c_map" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk_halo_1_1_c_map" kindref="compound">CMap</ref></highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="102" refid="class_disk_halo_1_1_c_map_1a4cb11ff9d639153146a10c93ea800bc6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_map_1a4cb11ff9d639153146a10c93ea800bc6" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="103" refid="class_disk_halo_1_1_c_map_1ad1b12dd747f576457c99a5b8bc15b7dc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_map_1ad1b12dd747f576457c99a5b8bc15b7dc" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="class_disk_halo_1_1_c_lin" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk_halo_1_1_c_lin" kindref="compound">CLin</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_map" kindref="compound">CMap</ref></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="class_disk_halo_1_1_c_lin_1a468d63ce8cdcf50378f10e5e4dada84c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_lin_1a468d63ce8cdcf50378f10e5e4dada84c" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>x;<sp/>}</highlight></codeline>
-<codeline lineno="111" refid="class_disk_halo_1_1_c_lin_1aec200dc55db3f7d8c9daa70350f8ac0c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_lin_1aec200dc55db3f7d8c9daa70350f8ac0c" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;<sp/>}</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_disk_halo_1_1_c_log" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk_halo_1_1_c_log" kindref="compound">CLog</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_map" kindref="compound">CMap</ref></highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_disk_halo_1_1_c_log_1a31092d32f4515aa413d10b0e39a83843" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_log_1a31092d32f4515aa413d10b0e39a83843" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>exp(x);<sp/>}</highlight></codeline>
-<codeline lineno="119" refid="class_disk_halo_1_1_c_log_1add2e31b38ce77758e1da963ab70ac859" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_log_1add2e31b38ce77758e1da963ab70ac859" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>log(r);<sp/>}</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122" refid="class_disk_halo_1_1_c_rat" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk_halo_1_1_c_rat" kindref="compound">CRat</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_map" kindref="compound">CMap</ref></highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="125" refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129" refid="class_disk_halo_1_1_c_rat_1ac611b9854ba4a314a7cb6ab72e103230" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1_1_c_rat_1ac611b9854ba4a314a7cb6ab72e103230" kindref="member">CRat</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>)<sp/><sp/>:<sp/><ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>(<ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>)<sp/><sp/><sp/>{}</highlight></codeline>
-<codeline lineno="130" refid="class_disk_halo_1_1_c_rat_1a69a95909c03f8e0086bd332a848f7c8d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1_1_c_rat_1a69a95909c03f8e0086bd332a848f7c8d" kindref="member">CRat</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_rat" kindref="compound">CRat</ref>&amp;<sp/>p)<sp/>:<sp/><ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>(p.<ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>)<sp/>{}</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="132" refid="class_disk_halo_1_1_c_rat_1abae3a5351124d7ecdec5a0ff08834e74" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_rat_1abae3a5351124d7ecdec5a0ff08834e74" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>*(x<sp/>+<sp/>1.0)/(x<sp/>-<sp/>1.0);<sp/>}</highlight></codeline>
-<codeline lineno="133" refid="class_disk_halo_1_1_c_rat_1a47e8e9d3476c8c7a92867d8172923f24" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1_1_c_rat_1a47e8e9d3476c8c7a92867d8172923f24" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(r<sp/>+<sp/><ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>)/(r<sp/>-<sp/><ref refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" kindref="member">scale</ref>);<sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136" refid="class_disk_halo_1a63ee4b75f4d48d5399a0e22636341e1b" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CMap&gt;<sp/><ref refid="class_disk_halo_1a63ee4b75f4d48d5399a0e22636341e1b" kindref="member">cmap</ref>;</highlight></codeline>
-<codeline lineno="137" refid="class_disk_halo_1af99610b708fde8e1340d44090ed5ee00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a16b32dac2df1eb3083f98bbfcbaf364b" kindref="member">Xmin</ref>,<sp/><ref refid="class_disk_halo_1af99610b708fde8e1340d44090ed5ee00" kindref="member">Xmax</ref>;</highlight></codeline>
-<codeline lineno="138" refid="class_disk_halo_1a80198e4edf9f8a77239ecad18690f4bc" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_disk_halo_1a80198e4edf9f8a77239ecad18690f4bc" kindref="member">mtype</ref>;</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight></codeline>
-<codeline lineno="140" refid="class_disk_halo_1aae39db932a59fb46a79098cf97f06ae8" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CMap&gt;<sp/><ref refid="class_disk_halo_1aae39db932a59fb46a79098cf97f06ae8" kindref="member">make_cmap</ref>(std::string<sp/><ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>scale)</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/>std::for_each(<ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>.begin(),<sp/><ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>.end(),<sp/>[](</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>&amp;<sp/>c){<sp/>c<sp/>=<sp/>::tolower(c);<sp/>});</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;CMap&gt;<sp/><ref refid="class_disk_halo_1a63ee4b75f4d48d5399a0e22636341e1b" kindref="member">cmap</ref>;</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>.find(</highlight><highlight class="stringliteral">&quot;linear&quot;</highlight><highlight class="normal">)<sp/>==<sp/>0)<sp/><sp/><sp/><ref refid="class_disk_halo_1a63ee4b75f4d48d5399a0e22636341e1b" kindref="member">cmap</ref><sp/>=<sp/>std::make_shared&lt;CLin&gt;();</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>.find(</highlight><highlight class="stringliteral">&quot;log&quot;</highlight><highlight class="normal">)<sp/>==<sp/>0)<sp/><ref refid="class_disk_halo_1a63ee4b75f4d48d5399a0e22636341e1b" kindref="member">cmap</ref><sp/>=<sp/>std::make_shared&lt;CLog&gt;();</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>.find(</highlight><highlight class="stringliteral">&quot;rat&quot;</highlight><highlight class="normal">)<sp/>==<sp/>0)<sp/><ref refid="class_disk_halo_1a63ee4b75f4d48d5399a0e22636341e1b" kindref="member">cmap</ref><sp/>=<sp/>std::make_shared&lt;CRat&gt;(scale);</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1a63ee4b75f4d48d5399a0e22636341e1b" kindref="member">cmap</ref><sp/>=<sp/>std::make_shared&lt;CLog&gt;();</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a63ee4b75f4d48d5399a0e22636341e1b" kindref="member">cmap</ref>;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"></highlight></codeline>
-<codeline lineno="154"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156" refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7af632b5b63f510e67172781e47c4618df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" kindref="member">DiskGenType</ref><sp/>{<sp/><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7a2a6906e3e4918fc61c5e41c89e36ddba" kindref="member">Jeans</ref>,<sp/><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7af632b5b63f510e67172781e47c4618df" kindref="member">Asymmetric</ref>,<sp/><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7aace54a716c027b1d32476c5cd00f2130" kindref="member">Epicyclic</ref><sp/>};</highlight></codeline>
-<codeline lineno="157" refid="class_disk_halo_1a502375330bee39cb28c043e9cb45055a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::map&lt;std::string,<sp/>DiskGenType&gt;<sp/><ref refid="class_disk_halo_1a502375330bee39cb28c043e9cb45055a" kindref="member">getDiskGenType</ref>;</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_disk_halo_1a21826d2c3b8d4ff91a56851a13171d1a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a21826d2c3b8d4ff91a56851a13171d1a" kindref="member">NDP</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>disk<sp/>table<sp/>phi<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>16</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_disk_halo_1a3868ea2cb616fea090307cb94e87c126" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a3868ea2cb616fea090307cb94e87c126" kindref="member">NDZ</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>disk<sp/>table<sp/>z<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>200</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="164"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165" refid="class_disk_halo_1a6a2ee5d3f22c6b820b24dfc97ac557a1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a6a2ee5d3f22c6b820b24dfc97ac557a1" kindref="member">NDR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>disk<sp/>table<sp/>R<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>40</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168" refid="class_disk_halo_1a714139a9d1a7d0dec9455836f39a4515" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a714139a9d1a7d0dec9455836f39a4515" kindref="member">NHR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>halo<sp/>table<sp/>r<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>40</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="171" refid="class_disk_halo_1a4df75d86d8f538d244df42612a90aba1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a4df75d86d8f538d244df42612a90aba1" kindref="member">NHT</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>knots<sp/>in<sp/>halo<sp/>table<sp/>theta<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>40</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="174" refid="class_disk_halo_1ab11718bcf0112d0615fed4351a25cac5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ab11718bcf0112d0615fed4351a25cac5" kindref="member">RHMIN</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Smallest<sp/>radius<sp/>in<sp/>halo<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight></codeline>
-<codeline lineno="176" refid="class_disk_halo_1aab00fe5448b6574a8c253818bf79b6b7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1aab00fe5448b6574a8c253818bf79b6b7" kindref="member">RHMAX</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Largest<sp/>radius<sp/>in<sp/>halo<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="177"><highlight class="normal"></highlight></codeline>
-<codeline lineno="178" refid="class_disk_halo_1a048554ca5987cbbcb32599a73e829f3d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a048554ca5987cbbcb32599a73e829f3d" kindref="member">RDMIN</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Smallest<sp/>radius<sp/>in<sp/>disk<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="179"><highlight class="normal"></highlight></codeline>
-<codeline lineno="180" refid="class_disk_halo_1a495d8662a68a4584a86afc34be844f4d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a495d8662a68a4584a86afc34be844f4d" kindref="member">RDMAX</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Largest<sp/>radius<sp/>in<sp/>disk<sp/>grid<sp/>&amp;<sp/>model</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="182" refid="class_disk_halo_1a8bd0ecc3f059aa56b28959ba7efbf97b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a8bd0ecc3f059aa56b28959ba7efbf97b" kindref="member">COMPRESSION</ref>;<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Extra<sp/>effective<sp/>mass<sp/>due<sp/>to<sp/>disk</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>1.0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="184"><highlight class="normal"></highlight></codeline>
-<codeline lineno="185" refid="class_disk_halo_1afb14f5d49aac6d1145c5afd191e65d92" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1afb14f5d49aac6d1145c5afd191e65d92" kindref="member">SHFACTOR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Minimum<sp/>vertical<sp/>integration<sp/>size</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>in<sp/>units<sp/>of<sp/>scale<sp/>height</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="187"><highlight class="normal"></highlight></codeline>
-<codeline lineno="188" refid="class_disk_halo_1ab134b814316aec061831a283dd90fbdc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ab134b814316aec061831a283dd90fbdc" kindref="member">TOLE</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Energy<sp/>offset<sp/>for<sp/>particle<sp/>selection</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>0.003</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="190"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191" refid="class_disk_halo_1a22b68e63a9adce99ee77139853193749" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a22b68e63a9adce99ee77139853193749" kindref="member">Q</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Toomre<sp/>Q.<sp/><sp/>Default:<sp/>0.0<sp/>(use</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>exponential)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="193"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194" refid="class_disk_halo_1a1f7889f91e26a5ceb8b5ac696c366464" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a1f7889f91e26a5ceb8b5ac696c366464" kindref="member">XI</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Ratio<sp/>of<sp/>radial<sp/>to<sp/>tangential</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>velocity<sp/>dispersion<sp/>scale</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>length.<sp/>Default:<sp/>1.0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198" refid="class_disk_halo_1a7ae9a65e8ff0c07616fd0f1e445e547c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a7ae9a65e8ff0c07616fd0f1e445e547c" kindref="member">SIG0</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Velocity<sp/>dispersion<sp/>fraction<sp/>at<sp/>a</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>scale<sp/>length.<sp/>Default:<sp/>0.1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
-<codeline lineno="201" refid="class_disk_halo_1a1990fe14a51f8e21fd4191f3f3726783" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a1990fe14a51f8e21fd4191f3f3726783" kindref="member">R_DF</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Change<sp/>over<sp/>points<sp/>for<sp/>DF<sp/>and<sp/>Jeans</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="202" refid="class_disk_halo_1a6754a3982cb7404c4b64dbcf2d640f36" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a6754a3982cb7404c4b64dbcf2d640f36" kindref="member">DR_DF</ref>;</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
-<codeline lineno="204" refid="class_disk_halo_1a8896fee312a81b383e1a1f74e85aa63b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a8896fee312a81b383e1a1f74e85aa63b" kindref="member">NBUF</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>particles<sp/>in<sp/>MPI<sp/>buffer</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>default:<sp/>8192</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="207" refid="class_disk_halo_1a5bd5e8d15ef312340cbfa62921590190" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a5bd5e8d15ef312340cbfa62921590190" kindref="member">LOGR</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Radial<sp/>grid<sp/>for<sp/>Eddington<sp/>inversion</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="208"><highlight class="normal"></highlight></codeline>
-<codeline lineno="209" refid="class_disk_halo_1aa5023c6dd6094e4d1d543ea7608f3290" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1aa5023c6dd6094e4d1d543ea7608f3290" kindref="member">CHEBY</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>Cheybshev<sp/>fit<sp/>for<sp/>epicylic<sp/>derivatives</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211" refid="class_disk_halo_1a6ce7ae73573a7dfa30ce8516cdf4e933" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><ref refid="class_disk_halo_1a6ce7ae73573a7dfa30ce8516cdf4e933" kindref="member">NCHEB</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Order<sp/>for<sp/>Cheybshev<sp/>fit</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight></codeline>
-<codeline lineno="213" refid="class_disk_halo_1a564a8fa46b75a69aa8aca08bf5089540" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a564a8fa46b75a69aa8aca08bf5089540" kindref="member">ALLOW</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Turn<sp/>off<sp/>negative<sp/>mass<sp/>requeueing<sp/>in</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>multimass<sp/>model</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="216" refid="class_disk_halo_1affcbe4fe376f3fb19ab64975d140acc6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1affcbe4fe376f3fb19ab64975d140acc6" kindref="member">SEED</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Initial<sp/>seed</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="217"><highlight class="normal"></highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight></codeline>
-<codeline lineno="219" refid="class_disk_halo_1a6c621166eec69d66e170e7d11b7cb98f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a6c621166eec69d66e170e7d11b7cb98f" kindref="member">ITMAX</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Maximum<sp/>number<sp/>of<sp/>DF<sp/>iterations</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight></codeline>
-<codeline lineno="221" refid="class_disk_halo_1a0b66e7eff857ebd7ae887eaf91aa247a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a0b66e7eff857ebd7ae887eaf91aa247a" kindref="member">use_mono</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>monopole<sp/>approximation<sp/>for</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>computing<sp/>total<sp/>d(phi)/dr</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224" refid="class_disk_halo_1abb00a8f631abf913188d1b65037d90b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1abb00a8f631abf913188d1b65037d90b9" kindref="member">RA</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Anisotropy<sp/>radius<sp/>(default:<sp/>1e20)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="225"><highlight class="normal"></highlight></codeline>
-<codeline lineno="226" refid="class_disk_halo_1acf7681a52d9b10203844900d78fe7750" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1acf7681a52d9b10203844900d78fe7750" kindref="member">NUMDF</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>DF<sp/>grid<sp/>points<sp/>(default:<sp/>1200)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight></codeline>
-<codeline lineno="228" refid="class_disk_halo_1abca114be72dc8df914274c271df513d3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1abca114be72dc8df914274c271df513d3" kindref="member">RNUM</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>model<sp/>grid<sp/>points<sp/>for<sp/>added</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>component<sp/>(default:<sp/>1000)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="231" refid="class_disk_halo_1ad28f2d8d8f8eac6e85eeb8dd3c027f66" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ad28f2d8d8f8eac6e85eeb8dd3c027f66" kindref="member">VFLAG</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Verbose<sp/>debugging<sp/>flags</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Bit<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Action</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>---<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>1<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Informational</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>2<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Model<sp/>diagnostics</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>4<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Table<sp/>diagnostics</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>8<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Velocity<sp/>diagnostics</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="239"><highlight class="normal"></highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>ID<sp/>string<sp/>for<sp/>debugging<sp/>output</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="241" refid="class_disk_halo_1a7a25c51f247b7c89e4c9dcf85cd40c2e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a7a25c51f247b7c89e4c9dcf85cd40c2e" kindref="member">RUNTAG</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>&quot;debug&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="242"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244" refid="class_disk_halo_1a967ed5b5eb61f41c80a495c347d4d825" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_halo_1a967ed5b5eb61f41c80a495c347d4d825" kindref="member">DiskHalo</ref>();</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247" refid="class_disk_halo_1a08890e60645b6ac133b892e5e9cae817" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_halo_1a08890e60645b6ac133b892e5e9cae817" kindref="member">DiskHalo</ref>(<ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref><sp/><ref refid="class_disk_halo_1af8ff0dbb1f05d6fbd3bb568d3355aa62" kindref="member">expandh</ref>,<sp/><ref refid="_emp_cyl_s_l_8_h_1aa0ef74652fa64c2615c9ff54a5d9e8e2" kindref="member">EmpCylSLptr</ref><sp/><ref refid="class_disk_halo_1a19b6e717b6fa153ab4667ff08c5a7292" kindref="member">expandd</ref>,</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>H,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DMass,<sp/>std::string<sp/>maptype,</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>filename,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1aeec5dcba963c3f5c4e0f579a61c133aa" kindref="member">DF</ref>=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE=0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC=1.0,</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" kindref="member">DiskGenType</ref><sp/><ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>=<ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7af632b5b63f510e67172781e47c4618df" kindref="member">Asymmetric</ref>);</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"></highlight></codeline>
-<codeline lineno="253" refid="class_disk_halo_1a2914cb9f30e78d32db7bda12290b5f15" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_halo_1a2914cb9f30e78d32db7bda12290b5f15" kindref="member">DiskHalo</ref>(<ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref><sp/>haloexp,<sp/><ref refid="_emp_cyl_s_l_8_h_1aa0ef74652fa64c2615c9ff54a5d9e8e2" kindref="member">EmpCylSLptr</ref><sp/>diskexp,</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>H,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DMass,<sp/>std::string<sp/>maptype,</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>filename1,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE,<sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC,</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>filename2,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE2,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC2,</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" kindref="member">DiskGenType</ref><sp/><ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>=<ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7af632b5b63f510e67172781e47c4618df" kindref="member">Asymmetric</ref>);</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"></highlight></codeline>
-<codeline lineno="260" refid="class_disk_halo_1ac66b266a337d735c5f274c7ce690b427" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_halo_1ac66b266a337d735c5f274c7ce690b427" kindref="member">DiskHalo</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo" kindref="compound">DiskHalo</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"></highlight></codeline>
-<codeline lineno="263" refid="class_disk_halo_1ad5b73cf365de8a78874dc3f797ac7036" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_halo_1ad5b73cf365de8a78874dc3f797ac7036" kindref="member">~DiskHalo</ref>();</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="265" refid="class_disk_halo_1a31f4c09a27f2611a64d0cc35fb52a274" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a31f4c09a27f2611a64d0cc35fb52a274" kindref="member">set_halo</ref>(vector&lt;Particle&gt;&amp;<sp/>phalo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nhalo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>npart);</highlight></codeline>
-<codeline lineno="266" refid="class_disk_halo_1a89e916e7288b0eb9602d29947a32f3d5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a89e916e7288b0eb9602d29947a32f3d5" kindref="member">set_halo_coordinates</ref>(vector&lt;Particle&gt;&amp;<sp/>phalo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nhalo,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>npart);</highlight></codeline>
-<codeline lineno="267" refid="class_disk_halo_1a4a283558b830368a20ea38c1baf56ae8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a4a283558b830368a20ea38c1baf56ae8" kindref="member">set_disk_coordinates</ref>(vector&lt;Particle&gt;&amp;<sp/>pdisk,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ndisk,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>npart);</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"></highlight></codeline>
-<codeline lineno="269" refid="class_disk_halo_1ad55594d03d945e015539e141f8455733" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ad55594d03d945e015539e141f8455733" kindref="member">set_halo_table_single</ref>(vector&lt;Particle&gt;&amp;<sp/>phalo);</highlight></codeline>
-<codeline lineno="270" refid="class_disk_halo_1a528b2213397b8176ae83783ab6fe3655" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a528b2213397b8176ae83783ab6fe3655" kindref="member">set_halo_table_multi</ref><sp/>(vector&lt;Particle&gt;&amp;<sp/>phalo);</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"></highlight></codeline>
-<codeline lineno="272" refid="class_disk_halo_1a9f0ea7490629b857c57fbb12cc6db161" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a9f0ea7490629b857c57fbb12cc6db161" kindref="member">set_pos_origin</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>z)<sp/></highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1ae21e949ca3cb96f7be9be2321cd25698" kindref="member">center_pos</ref>[0]<sp/>=<sp/>x;</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1ae21e949ca3cb96f7be9be2321cd25698" kindref="member">center_pos</ref>[1]<sp/>=<sp/>y;</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1ae21e949ca3cb96f7be9be2321cd25698" kindref="member">center_pos</ref>[2]<sp/>=<sp/>z;</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="278"><highlight class="normal"></highlight></codeline>
-<codeline lineno="279" refid="class_disk_halo_1afb9cde783f0f6819ae9e8b4ed2e0af74" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1afb9cde783f0f6819ae9e8b4ed2e0af74" kindref="member">set_vel_origin</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>z)<sp/></highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1a07ef76d6c4dac9992219acb4d68d8ebe" kindref="member">center_vel</ref>[0]<sp/>=<sp/>x;</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1a07ef76d6c4dac9992219acb4d68d8ebe" kindref="member">center_vel</ref>[1]<sp/>=<sp/>y;</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_disk_halo_1a07ef76d6c4dac9992219acb4d68d8ebe" kindref="member">center_vel</ref>[2]<sp/>=<sp/>z;</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"></highlight></codeline>
-<codeline lineno="286" refid="class_disk_halo_1a2b2adba7a7e57d38db73274770fc9c59" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a2b2adba7a7e57d38db73274770fc9c59" kindref="member">get_hpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"></highlight></codeline>
-<codeline lineno="288" refid="class_disk_halo_1a1063e3162c7a27ae25ec238a2508c1de" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a1063e3162c7a27ae25ec238a2508c1de" kindref="member">get_dpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"></highlight></codeline>
-<codeline lineno="290" refid="class_disk_halo_1a2b3057d43acae935b50088810227480c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a2b3057d43acae935b50088810227480c" kindref="member">get_hdpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"></highlight></codeline>
-<codeline lineno="292" refid="class_disk_halo_1aa6dfeb288029b4390db309ebee76285b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1aa6dfeb288029b4390db309ebee76285b" kindref="member">get_ddpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="300" refid="class_disk_halo_1a04db80770e471ab63ffc87179afa81e0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a04db80770e471ab63ffc87179afa81e0" kindref="member">disk_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;fr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;fz,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;fp);</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"></highlight></codeline>
-<codeline lineno="303" refid="class_disk_halo_1a6b0c9e2c209e56d0eea28b5fca203e8f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a6b0c9e2c209e56d0eea28b5fca203e8f" kindref="member">epi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"></highlight></codeline>
-<codeline lineno="305" refid="class_disk_halo_1a5d9768a3c81784c15caa5c2c9c19a331" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a5d9768a3c81784c15caa5c2c9c19a331" kindref="member">table_disk</ref>(vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight></codeline>
-<codeline lineno="307" refid="class_disk_halo_1ab7e59c8984171fd64f832ce6af568c6c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ab7e59c8984171fd64f832ce6af568c6c" kindref="member">vz_disp2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"></highlight></codeline>
-<codeline lineno="309" refid="class_disk_halo_1a9e368c3397604f8b491fb536f48b9e80" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a9e368c3397604f8b491fb536f48b9e80" kindref="member">vr_disp2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="310"><highlight class="normal"></highlight></codeline>
-<codeline lineno="311" refid="class_disk_halo_1a498dc3c45898c51270bbe9c6b48d5e45" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a498dc3c45898c51270bbe9c6b48d5e45" kindref="member">a_drift</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="312"><highlight class="normal"></highlight></codeline>
-<codeline lineno="313" refid="class_disk_halo_1afcd53163c0b27571599370db80c02987" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1afcd53163c0b27571599370db80c02987" kindref="member">vp_disp2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"></highlight></codeline>
-<codeline lineno="315" refid="class_disk_halo_1a07a4917e58daf565082f1dfd49bdbaa5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a07a4917e58daf565082f1dfd49bdbaa5" kindref="member">v_circ</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"></highlight></codeline>
-<codeline lineno="317" refid="class_disk_halo_1a42c06af7d29efb58b5f417a29234194b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a42c06af7d29efb58b5f417a29234194b" kindref="member">set_vel_disk</ref>(vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"></highlight></codeline>
-<codeline lineno="319" refid="class_disk_halo_1acfc5d54d530620a385328bfa97a012f7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1acfc5d54d530620a385328bfa97a012f7" kindref="member">table_halo</ref>(vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="320"><highlight class="normal"></highlight></codeline>
-<codeline lineno="321" refid="class_disk_halo_1a174215c0e2148caf208ac7e4ba3e4928" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a174215c0e2148caf208ac7e4ba3e4928" kindref="member">get_disp</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xp,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zp);</highlight></codeline>
-<codeline lineno="322"><highlight class="normal"></highlight></codeline>
-<codeline lineno="323" refid="class_disk_halo_1adad758940b44be5a3022c72b12fae5ef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1adad758940b44be5a3022c72b12fae5ef" kindref="member">set_vel_halo</ref>(vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"></highlight></codeline>
-<codeline lineno="325" refid="class_disk_halo_1a371da444e51e432f0412104156a4cd85" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a371da444e51e432f0412104156a4cd85" kindref="member">write_file</ref>(ostream<sp/>&amp;fou,<sp/>vector&lt;Particle&gt;&amp;<sp/>part);</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"></highlight></codeline>
-<codeline lineno="327" refid="class_disk_halo_1a62c375ae24d2db9b0286bc05c845e8f3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a62c375ae24d2db9b0286bc05c845e8f3" kindref="member">virial_ratio</ref>(vector&lt;Particle&gt;&amp;<sp/>hpart,<sp/>vector&lt;Particle&gt;&amp;<sp/>dpart);</highlight></codeline>
-<codeline lineno="328"><highlight class="normal"></highlight></codeline>
-<codeline lineno="329" refid="class_disk_halo_1ad88d6fe1c7f1a8d6bc4d5a379b3cec73" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1ad88d6fe1c7f1a8d6bc4d5a379b3cec73" kindref="member">virial_ratio</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="330"><highlight class="normal"></highlight></codeline>
-<codeline lineno="331" refid="class_disk_halo_1a2c7f95bed1c38adab0bd399587191e7d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a2c7f95bed1c38adab0bd399587191e7d" kindref="member">zero_com</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>val)<sp/>{<sp/><ref refid="class_disk_halo_1a34b17e5f5dfd9421b062d296b7838762" kindref="member">com</ref><sp/>=<sp/>val;<sp/>}</highlight></codeline>
-<codeline lineno="332"><highlight class="normal"></highlight></codeline>
-<codeline lineno="333" refid="class_disk_halo_1a6535ae97cef5deb742c066015280ebdb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a6535ae97cef5deb742c066015280ebdb" kindref="member">zero_cov</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>val)<sp/>{<sp/><ref refid="class_disk_halo_1aaaab422ba80a90be3ccef7167b0d1512" kindref="member">cov</ref><sp/>=<sp/>val;<sp/>}</highlight></codeline>
-<codeline lineno="334"><highlight class="normal"></highlight></codeline>
-<codeline lineno="335" refid="class_disk_halo_1a6cb42802fb69e0381c8d9476add9ba80" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a6cb42802fb69e0381c8d9476add9ba80" kindref="member">profile</ref>(std::ostream<sp/>&amp;rotfile,<sp/>vector&lt;Particle&gt;&amp;<sp/>dpart,</highlight></codeline>
-<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numr);</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"></highlight></codeline>
-<codeline lineno="338" refid="class_disk_halo_1a97d2c89cc3f75574e52b5ce67983c9eb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_halo_1a97d2c89cc3f75574e52b5ce67983c9eb" kindref="member">disk_model</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;modfile);</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"></highlight></codeline>
-<codeline lineno="340"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="341" refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" kindref="member">DiskGenType</ref><sp/><ref refid="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" kindref="member">type</ref>;</highlight></codeline>
-<codeline lineno="342"><highlight class="normal"></highlight></codeline>
-<codeline lineno="343"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"></highlight></codeline>
-<codeline lineno="345"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="346"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_disk_models_8_h.xml b/doxyxml/_disk_models_8_h.xml
deleted file mode 100644
index f89be1e..0000000
--- a/doxyxml/_disk_models_8_h.xml
+++ /dev/null
@@ -1,594 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_disk_models_8_h" kind="file" language="C++">
-    <compoundname>DiskModels.H</compoundname>
-    <includes refid="_emp_cyl_s_l_8_h" local="no">EmpCylSL.H</includes>
-    <includes refid="_disk_density_func_8_h" local="no">DiskDensityFunc.H</includes>
-    <includedby refid="_disk_eval_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H</includedby>
-    <incdepgraph>
-      <node id="38">
-        <label>DiskDensityFunc.H</label>
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-        <childnode refid="39" relation="include">
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-        <label>/home/weinberg/Projects/EXP/include/DiskModels.H</label>
-        <link refid="_disk_models_8_h"/>
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-        <childnode refid="38" relation="include">
-        </childnode>
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-      <node id="33">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="29" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="3" relation="include">
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-        <childnode refid="36" relation="include">
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-      </node>
-      <node id="17">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="4" relation="include">
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-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
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-      </node>
-      <node id="21">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="32">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="11" relation="include">
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-        <childnode refid="14" relation="include">
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-        <childnode refid="31" relation="include">
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-      <node id="23">
-        <label>SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
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-        <childnode refid="10" relation="include">
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-      <node id="19">
-        <label>Timer.H</label>
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-        <label>coef.H</label>
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-      <node id="9">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="10" relation="include">
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-        <childnode refid="11" relation="include">
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-        <childnode refid="4" relation="include">
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-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
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-        <childnode refid="4" relation="include">
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-      <node id="36">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
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-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
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-      <node id="29">
-        <label>massmodel.H</label>
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-        </childnode>
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-        <label>Eigen/Eigen</label>
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-        <label>cmath</label>
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-        <label>config_exp.h</label>
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-        <label>mpi.h</label>
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-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/DiskModels.H</label>
-        <link refid="_disk_models_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
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-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H</label>
-        <link refid="_disk_eval_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="classdiskbulge" prot="public">diskbulge</innerclass>
-    <innerclass refid="class_double_exponential" prot="public">DoubleExponential</innerclass>
-    <innerclass refid="class_exponential" prot="public">Exponential</innerclass>
-    <innerclass refid="class_f_e_e_d" prot="public">FEED</innerclass>
-    <innerclass refid="class_ferrers" prot="public">Ferrers</innerclass>
-    <innerclass refid="class_m_ndisk" prot="public">MNdisk</innerclass>
-    <innerclass refid="class_py_model" prot="public">PyModel</innerclass>
-    <innerclass refid="class_truncated" prot="public">Truncated</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_DISK_MODELS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_DISK_MODELS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_emp_cyl_s_l_8_h" kindref="compound">EmpCylSL.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_disk_density_func_8_h" kindref="compound">DiskDensityFunc.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9" refid="class_f_e_e_d" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_f_e_e_d" kindref="compound">FEED</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk" kindref="compound">EmpCylSL::AxiDisk</ref></highlight></codeline>
-<codeline lineno="10"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="12" refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>,<sp/><ref refid="class_f_e_e_d_1a9275d32822561afeaecda6b69bc6d8a7" kindref="member">b</ref>,<sp/><ref refid="class_f_e_e_d_1a3acaa357c3568eeeb68c9d14f59faca9" kindref="member">c</ref>,<sp/><ref refid="class_f_e_e_d_1a693ee3e071d92ac26af8e02ee6cb095c" kindref="member">r0</ref>,<sp/><ref refid="class_f_e_e_d_1a8d4144fb3147caa6abe93fcc5731ef70" kindref="member">z0</ref>,<sp/><ref refid="class_f_e_e_d_1a06d6530006b807bebff7c6f437fdf739" kindref="member">fbar</ref>;</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">/*</highlight></codeline>
-<codeline lineno="14"><highlight class="comment"><sp/><sp/>a<sp/><sp/><sp/><sp/>:<sp/>the<sp/>major<sp/>axis<sp/>length<sp/>for<sp/>the<sp/>Ferrers<sp/>bar</highlight></codeline>
-<codeline lineno="15"><highlight class="comment"><sp/><sp/>b<sp/><sp/><sp/><sp/>:<sp/>the<sp/>intermediate<sp/>axis<sp/>length<sp/>for<sp/>Ferrers<sp/>bar</highlight></codeline>
-<codeline lineno="16"><highlight class="comment"><sp/><sp/>c<sp/><sp/><sp/><sp/>:<sp/>the<sp/>minor<sp/>axis<sp/>length<sp/>for<sp/>Ferrers<sp/>bar</highlight></codeline>
-<codeline lineno="17"><highlight class="comment"><sp/><sp/>r0<sp/><sp/><sp/>:<sp/>the<sp/>scale<sp/>length<sp/>for<sp/>the<sp/>exponential<sp/>disc</highlight></codeline>
-<codeline lineno="18"><highlight class="comment"><sp/><sp/>z0<sp/><sp/><sp/>:<sp/>the<sp/>scale<sp/>height<sp/>for<sp/>the<sp/>exponential<sp/>disc</highlight></codeline>
-<codeline lineno="19"><highlight class="comment"><sp/><sp/>fbar<sp/>:<sp/>the<sp/>fraction<sp/>of<sp/>the<sp/>total<sp/>mass<sp/>in<sp/>the<sp/>Ferrers<sp/>component</highlight></codeline>
-<codeline lineno="20"><highlight class="comment"></highlight></codeline>
-<codeline lineno="21"><highlight class="comment"><sp/><sp/>CAUTION:<sp/>some<sp/>parameter<sp/>combinations<sp/>result<sp/>in<sp/>aphysical<sp/>densities,<sp/></highlight></codeline>
-<codeline lineno="22"><highlight class="comment"><sp/><sp/>which<sp/>this<sp/>routine<sp/>will<sp/>simply<sp/>zero<sp/>out.<sp/></highlight></codeline>
-<codeline lineno="23"><highlight class="comment"></highlight></codeline>
-<codeline lineno="24"><highlight class="comment"><sp/><sp/>This<sp/>almost<sp/>certainly<sp/>is<sp/>not<sp/>the<sp/>desired<sp/>behavior;<sp/>it<sp/>is<sp/>recommended</highlight></codeline>
-<codeline lineno="25"><highlight class="comment"><sp/><sp/>that<sp/>you<sp/>check<sp/>the<sp/>density<sp/>structure<sp/>of<sp/>the<sp/>input<sp/>model<sp/>before</highlight></codeline>
-<codeline lineno="26"><highlight class="comment"><sp/><sp/>proceeding.</highlight></codeline>
-<codeline lineno="27"><highlight class="comment"></highlight></codeline>
-<codeline lineno="28"><highlight class="comment"><sp/><sp/><sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_f_e_e_d_1a665cdaf1a2e9f4df26004b4b8b80c1e6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_f_e_e_d_1a665cdaf1a2e9f4df26004b4b8b80c1e6" kindref="member">FEED</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_f_e_e_d_1a9275d32822561afeaecda6b69bc6d8a7" kindref="member">b</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_f_e_e_d_1a3acaa357c3568eeeb68c9d14f59faca9" kindref="member">c</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_f_e_e_d_1a693ee3e071d92ac26af8e02ee6cb095c" kindref="member">r0</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_f_e_e_d_1a8d4144fb3147caa6abe93fcc5731ef70" kindref="member">z0</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_f_e_e_d_1a06d6530006b807bebff7c6f437fdf739" kindref="member">fbar</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>=1)<sp/>:</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>(<ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>),<sp/><ref refid="class_f_e_e_d_1a9275d32822561afeaecda6b69bc6d8a7" kindref="member">b</ref>(<ref refid="class_f_e_e_d_1a9275d32822561afeaecda6b69bc6d8a7" kindref="member">b</ref>),<sp/><ref refid="class_f_e_e_d_1a3acaa357c3568eeeb68c9d14f59faca9" kindref="member">c</ref>(<ref refid="class_f_e_e_d_1a3acaa357c3568eeeb68c9d14f59faca9" kindref="member">c</ref>),<sp/><ref refid="class_f_e_e_d_1a693ee3e071d92ac26af8e02ee6cb095c" kindref="member">r0</ref>(<ref refid="class_f_e_e_d_1a693ee3e071d92ac26af8e02ee6cb095c" kindref="member">r0</ref>),<sp/><ref refid="class_f_e_e_d_1a8d4144fb3147caa6abe93fcc5731ef70" kindref="member">z0</ref>(<ref refid="class_f_e_e_d_1a8d4144fb3147caa6abe93fcc5731ef70" kindref="member">z0</ref>),<sp/><ref refid="class_f_e_e_d_1a06d6530006b807bebff7c6f437fdf739" kindref="member">fbar</ref>(<ref refid="class_f_e_e_d_1a06d6530006b807bebff7c6f437fdf739" kindref="member">fbar</ref>),<sp/><ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>::<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a47284137e24ca113e6250992a26d5920" kindref="member">AxiDisk</ref>(<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>,<sp/></highlight><highlight class="stringliteral">&quot;FEED&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>);</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_f_e_e_d_1a9275d32822561afeaecda6b69bc6d8a7" kindref="member">b</ref>);</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_f_e_e_d_1a3acaa357c3568eeeb68c9d14f59faca9" kindref="member">c</ref>);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_f_e_e_d_1a693ee3e071d92ac26af8e02ee6cb095c" kindref="member">r0</ref>);</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_f_e_e_d_1a8d4144fb3147caa6abe93fcc5731ef70" kindref="member">z0</ref>);</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_f_e_e_d_1a06d6530006b807bebff7c6f437fdf739" kindref="member">fbar</ref>);</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_f_e_e_d_1a4cdb62eae2ff9a16050f089835666e99" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_f_e_e_d_1a4cdb62eae2ff9a16050f089835666e99" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi=0.)</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x<sp/>=<sp/>R*cos(phi);</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y<sp/>=<sp/>R*sin(phi);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sh<sp/>=<sp/>1.0/cosh(z/<ref refid="class_f_e_e_d_1a8d4144fb3147caa6abe93fcc5731ef70" kindref="member">z0</ref>);</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fm,<sp/>bardens,<sp/>ferrersdisk,<sp/>basedisk;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>set<sp/>up<sp/>the<sp/>Ferrers<sp/>component</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>fm<sp/>=<sp/>sqrt(<sp/>(x/<ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>)*(x/<ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>)<sp/>+<sp/>(y/<ref refid="class_f_e_e_d_1a9275d32822561afeaecda6b69bc6d8a7" kindref="member">b</ref>)*(y/<ref refid="class_f_e_e_d_1a9275d32822561afeaecda6b69bc6d8a7" kindref="member">b</ref>)<sp/>+<sp/>(z/<ref refid="class_f_e_e_d_1a3acaa357c3568eeeb68c9d14f59faca9" kindref="member">c</ref>)*(z/<ref refid="class_f_e_e_d_1a3acaa357c3568eeeb68c9d14f59faca9" kindref="member">c</ref>)<sp/>);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>only<sp/>allowing<sp/>for<sp/>n=2<sp/>at<sp/>present</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>n<sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rho0<sp/>=<sp/><ref refid="class_f_e_e_d_1a06d6530006b807bebff7c6f437fdf739" kindref="member">fbar</ref>*(105/(32*M_PI))/(<ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>*<ref refid="class_f_e_e_d_1a9275d32822561afeaecda6b69bc6d8a7" kindref="member">b</ref>*<ref refid="class_f_e_e_d_1a3acaa357c3568eeeb68c9d14f59faca9" kindref="member">c</ref>);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fm&gt;1)<sp/>{</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bardens<sp/>=<sp/>0.;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>bardens<sp/>=<sp/>rho0<sp/>*<sp/>pow((1-fm*fm),n);</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>set<sp/>up<sp/>the<sp/>(to<sp/>be<sp/>subtracted)<sp/>Ferrers<sp/>exponential<sp/>disk</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fdiscr0<sp/>=<sp/><ref refid="class_f_e_e_d_1a87ecc1f748a73139d6edf35c0b8aaeef" kindref="member">a</ref>/3.;<sp/></highlight><highlight class="comment">//<sp/>scaled<sp/>to<sp/>the<sp/>Ferrers<sp/>bar<sp/>major<sp/>axis<sp/>length</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>ferrersdisk<sp/>=<sp/><ref refid="class_f_e_e_d_1a06d6530006b807bebff7c6f437fdf739" kindref="member">fbar</ref>*0.25/(M_PI*fdiscr0*fdiscr0*<ref refid="class_f_e_e_d_1a8d4144fb3147caa6abe93fcc5731ef70" kindref="member">z0</ref>)<sp/>*<sp/>exp(-R/fdiscr0)<sp/>*<sp/>sh<sp/>*<sp/>sh;</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>set<sp/>up<sp/>the<sp/>base<sp/>exponential<sp/>disk</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>basedisk<sp/>=<sp/>0.25/(M_PI*<ref refid="class_f_e_e_d_1a693ee3e071d92ac26af8e02ee6cb095c" kindref="member">r0</ref>*<ref refid="class_f_e_e_d_1a693ee3e071d92ac26af8e02ee6cb095c" kindref="member">r0</ref>*<ref refid="class_f_e_e_d_1a8d4144fb3147caa6abe93fcc5731ef70" kindref="member">z0</ref>)<sp/>*<sp/>exp(-R/<ref refid="class_f_e_e_d_1a693ee3e071d92ac26af8e02ee6cb095c" kindref="member">r0</ref>)<sp/>*<sp/>sh<sp/>*<sp/>sh;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref><sp/>*<sp/>(basedisk<sp/>-<sp/>ferrersdisk<sp/>+<sp/>bardens);</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_ferrers" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_ferrers" kindref="compound">Ferrers</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk" kindref="compound">EmpCylSL::AxiDisk</ref></highlight></codeline>
-<codeline lineno="81"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="83" refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" kindref="member">a</ref>,<sp/><ref refid="class_ferrers_1abf2fbac25620ae213f4f69cddbb9e604" kindref="member">b</ref>,<sp/><ref refid="class_ferrers_1aa21b99a88839045fca8f0513fc4f7587" kindref="member">c</ref>;</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_ferrers_1a42af48bbff4161ced7cc5c7e7be8729b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ferrers_1a42af48bbff4161ced7cc5c7e7be8729b" kindref="member">Ferrers</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" kindref="member">a</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ferrers_1abf2fbac25620ae213f4f69cddbb9e604" kindref="member">b</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ferrers_1aa21b99a88839045fca8f0513fc4f7587" kindref="member">c</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>=1)<sp/>:</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" kindref="member">a</ref>(<ref refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" kindref="member">a</ref>),<sp/><ref refid="class_ferrers_1abf2fbac25620ae213f4f69cddbb9e604" kindref="member">b</ref>(<ref refid="class_ferrers_1abf2fbac25620ae213f4f69cddbb9e604" kindref="member">b</ref>),<sp/><ref refid="class_ferrers_1aa21b99a88839045fca8f0513fc4f7587" kindref="member">c</ref>(<ref refid="class_ferrers_1aa21b99a88839045fca8f0513fc4f7587" kindref="member">c</ref>),<sp/><ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>::<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a47284137e24ca113e6250992a26d5920" kindref="member">AxiDisk</ref>(<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>,<sp/></highlight><highlight class="stringliteral">&quot;Ferrers&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" kindref="member">a</ref>);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_ferrers_1abf2fbac25620ae213f4f69cddbb9e604" kindref="member">b</ref>);</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_ferrers_1aa21b99a88839045fca8f0513fc4f7587" kindref="member">c</ref>);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_ferrers_1a5fd4901f5cf39ea89b0b1dead97d998f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ferrers_1a5fd4901f5cf39ea89b0b1dead97d998f" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi=0.)</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x<sp/>=<sp/>R*cos(phi);</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y<sp/>=<sp/>R*sin(phi);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fm;</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>fm<sp/>=<sp/>sqrt(<sp/>(x/<ref refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" kindref="member">a</ref>)*(x/<ref refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" kindref="member">a</ref>)<sp/>+<sp/>(y/<ref refid="class_ferrers_1abf2fbac25620ae213f4f69cddbb9e604" kindref="member">b</ref>)*(y/<ref refid="class_ferrers_1abf2fbac25620ae213f4f69cddbb9e604" kindref="member">b</ref>)<sp/>+<sp/>(z/<ref refid="class_ferrers_1aa21b99a88839045fca8f0513fc4f7587" kindref="member">c</ref>)*(z/<ref refid="class_ferrers_1aa21b99a88839045fca8f0513fc4f7587" kindref="member">c</ref>)<sp/>);</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>only<sp/>allowing<sp/>for<sp/>n=2<sp/>at<sp/>present</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>n<sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rho0<sp/>=<sp/>(105/(32*M_PI))/(<ref refid="class_ferrers_1a989ef0c4e06fa3f6e5daefc4204c454d" kindref="member">a</ref>*<ref refid="class_ferrers_1abf2fbac25620ae213f4f69cddbb9e604" kindref="member">b</ref>*<ref refid="class_ferrers_1aa21b99a88839045fca8f0513fc4f7587" kindref="member">c</ref>);</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fm&gt;1)<sp/>{</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.;</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>rho0<sp/>*<sp/>pow((1-fm*fm),n);</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120" refid="class_exponential" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_exponential" kindref="compound">Exponential</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk" kindref="compound">EmpCylSL::AxiDisk</ref></highlight></codeline>
-<codeline lineno="121"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="123" refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" kindref="member">a</ref>,<sp/><ref refid="class_exponential_1a8cd69185e12eb4c9d75ae0846160e8f1" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127" refid="class_exponential_1af4ced1db8ef741a0ad657bbbd86f847f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_exponential_1af4ced1db8ef741a0ad657bbbd86f847f" kindref="member">Exponential</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" kindref="member">a</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_1a8cd69185e12eb4c9d75ae0846160e8f1" kindref="member">h</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>=1)<sp/>:</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" kindref="member">a</ref>(<ref refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" kindref="member">a</ref>),<sp/><ref refid="class_exponential_1a8cd69185e12eb4c9d75ae0846160e8f1" kindref="member">h</ref>(<ref refid="class_exponential_1a8cd69185e12eb4c9d75ae0846160e8f1" kindref="member">h</ref>),<sp/><ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>::<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a47284137e24ca113e6250992a26d5920" kindref="member">AxiDisk</ref>(<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>,<sp/></highlight><highlight class="stringliteral">&quot;Exponential&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" kindref="member">a</ref>);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_exponential_1a8cd69185e12eb4c9d75ae0846160e8f1" kindref="member">h</ref>);</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134" refid="class_exponential_1a9d5b044bf0435207b4cde747a62663de" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_1a9d5b044bf0435207b4cde747a62663de" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi=0.)</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sh<sp/>=<sp/>1.0/cosh(z/<ref refid="class_exponential_1a8cd69185e12eb4c9d75ae0846160e8f1" kindref="member">h</ref>);</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.25*<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>/(M_PI*<ref refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" kindref="member">a</ref>*<ref refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" kindref="member">a</ref>*<ref refid="class_exponential_1a8cd69185e12eb4c9d75ae0846160e8f1" kindref="member">h</ref>)<sp/>*<sp/>exp(-R/<ref refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" kindref="member">a</ref>)<sp/>*<sp/>sh<sp/>*<sp/>sh;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight></codeline>
-<codeline lineno="140"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="143" refid="class_double_exponential" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_double_exponential" kindref="compound">DoubleExponential</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk" kindref="compound">EmpCylSL::AxiDisk</ref></highlight></codeline>
-<codeline lineno="144"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="146" refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" kindref="member">a</ref>,<sp/><ref refid="class_double_exponential_1a355d9c1e583a01f6b10d186b10ceefbf" kindref="member">h</ref>,<sp/><ref refid="class_double_exponential_1a00743aa54f56a0353cdec2bcb8917dba" kindref="member">a2</ref>,<sp/><ref refid="class_double_exponential_1aa8160e140154c625b2a9b20fc6199a7e" kindref="member">h2</ref>,<sp/><ref refid="class_double_exponential_1a322c1e3db56a05bf8a8f10f8d0174567" kindref="member">Mfac</ref>,<sp/><ref refid="class_double_exponential_1a445c177db6ce26502f98741cd80c8eff" kindref="member">d1</ref>,<sp/><ref refid="class_double_exponential_1ade33a368b2a56da78441121d217ac798" kindref="member">d2</ref>;</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight></codeline>
-<codeline lineno="150" refid="class_double_exponential_1a71e0a47f9c67a92c51dcefaeafab33a8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_double_exponential_1a71e0a47f9c67a92c51dcefaeafab33a8" kindref="member">DoubleExponential</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" kindref="member">a</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_double_exponential_1a355d9c1e583a01f6b10d186b10ceefbf" kindref="member">h</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_double_exponential_1a00743aa54f56a0353cdec2bcb8917dba" kindref="member">a2</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_double_exponential_1aa8160e140154c625b2a9b20fc6199a7e" kindref="member">h2</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_double_exponential_1a322c1e3db56a05bf8a8f10f8d0174567" kindref="member">Mfac</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>=1)<sp/>:</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" kindref="member">a</ref>(<ref refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" kindref="member">a</ref>),<sp/><ref refid="class_double_exponential_1a355d9c1e583a01f6b10d186b10ceefbf" kindref="member">h</ref>(<ref refid="class_double_exponential_1a355d9c1e583a01f6b10d186b10ceefbf" kindref="member">h</ref>),<sp/><ref refid="class_double_exponential_1a00743aa54f56a0353cdec2bcb8917dba" kindref="member">a2</ref>(<ref refid="class_double_exponential_1a00743aa54f56a0353cdec2bcb8917dba" kindref="member">a2</ref>),<sp/><ref refid="class_double_exponential_1aa8160e140154c625b2a9b20fc6199a7e" kindref="member">h2</ref>(<ref refid="class_double_exponential_1aa8160e140154c625b2a9b20fc6199a7e" kindref="member">h2</ref>),<sp/><ref refid="class_double_exponential_1a322c1e3db56a05bf8a8f10f8d0174567" kindref="member">Mfac</ref>(<ref refid="class_double_exponential_1a322c1e3db56a05bf8a8f10f8d0174567" kindref="member">Mfac</ref>),<sp/><ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>::<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a47284137e24ca113e6250992a26d5920" kindref="member">AxiDisk</ref>(<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>,<sp/></highlight><highlight class="stringliteral">&quot;DoubleExponential&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" kindref="member">a</ref>);</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_double_exponential_1a355d9c1e583a01f6b10d186b10ceefbf" kindref="member">h</ref>);</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_double_exponential_1a00743aa54f56a0353cdec2bcb8917dba" kindref="member">a2</ref>);</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_double_exponential_1aa8160e140154c625b2a9b20fc6199a7e" kindref="member">h2</ref>);</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_double_exponential_1a322c1e3db56a05bf8a8f10f8d0174567" kindref="member">Mfac</ref>);</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160" refid="class_double_exponential_1af349fa39100fae66fe0a70f8df8f1ce8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_double_exponential_1af349fa39100fae66fe0a70f8df8f1ce8" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi=0.)</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sh<sp/>=<sp/>1.0/cosh(z/<ref refid="class_double_exponential_1a355d9c1e583a01f6b10d186b10ceefbf" kindref="member">h</ref>);</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_double_exponential_1a445c177db6ce26502f98741cd80c8eff" kindref="member">d1</ref><sp/>=<sp/>0.25*<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>*<ref refid="class_double_exponential_1a322c1e3db56a05bf8a8f10f8d0174567" kindref="member">Mfac</ref>/(M_PI*<ref refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" kindref="member">a</ref>*<ref refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" kindref="member">a</ref>*<ref refid="class_double_exponential_1a355d9c1e583a01f6b10d186b10ceefbf" kindref="member">h</ref>)<sp/>*<sp/>exp(-R/<ref refid="class_double_exponential_1a6802ef6a527c360a733f7d0478ac0c1d" kindref="member">a</ref>)<sp/>*<sp/>sh<sp/>*<sp/>sh;</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/>sh<sp/>=<sp/>1.0/cosh(z/<ref refid="class_double_exponential_1aa8160e140154c625b2a9b20fc6199a7e" kindref="member">h2</ref>);</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_double_exponential_1ade33a368b2a56da78441121d217ac798" kindref="member">d2</ref><sp/>=<sp/>0.25*<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>*(1-<ref refid="class_double_exponential_1a322c1e3db56a05bf8a8f10f8d0174567" kindref="member">Mfac</ref>)/(M_PI*<ref refid="class_double_exponential_1a00743aa54f56a0353cdec2bcb8917dba" kindref="member">a2</ref>*<ref refid="class_double_exponential_1a00743aa54f56a0353cdec2bcb8917dba" kindref="member">a2</ref>*<ref refid="class_double_exponential_1aa8160e140154c625b2a9b20fc6199a7e" kindref="member">h2</ref>)<sp/>*<sp/>exp(-R/<ref refid="class_double_exponential_1a00743aa54f56a0353cdec2bcb8917dba" kindref="member">a2</ref>)<sp/>*<sp/>sh<sp/>*<sp/>sh;</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_double_exponential_1a445c177db6ce26502f98741cd80c8eff" kindref="member">d1</ref><sp/>+<sp/><ref refid="class_double_exponential_1ade33a368b2a56da78441121d217ac798" kindref="member">d2</ref>;</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="171"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"></highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight></codeline>
-<codeline lineno="176" refid="class_m_ndisk" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_m_ndisk" kindref="compound">MNdisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk" kindref="compound">EmpCylSL::AxiDisk</ref></highlight></codeline>
-<codeline lineno="177"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="179" refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref>,<sp/><ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"></highlight></codeline>
-<codeline lineno="183" refid="class_m_ndisk_1a4a9fb4f3d860c03e500f35a4979d6179" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_m_ndisk_1a4a9fb4f3d860c03e500f35a4979d6179" kindref="member">MNdisk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>=1)<sp/>:</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref>(<ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref>),<sp/><ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>(<ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>),<sp/><ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>::<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a47284137e24ca113e6250992a26d5920" kindref="member">AxiDisk</ref>(<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>,<sp/></highlight><highlight class="stringliteral">&quot;Miyamoto-Nagai&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref>);</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>);</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight></codeline>
-<codeline lineno="190" refid="class_m_ndisk_1ae3af9cb061a40b31dec7486ca24c3fbe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_m_ndisk_1ae3af9cb061a40b31dec7486ca24c3fbe" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi=0.)</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Z2<sp/>=<sp/>z*z<sp/>+<sp/><ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>*<ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Z<sp/><sp/>=<sp/>sqrt(Z2);</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Q2<sp/>=<sp/>(<ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref><sp/>+<sp/>Z)*(<ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref><sp/>+<sp/>Z);</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.25*<ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>*<ref refid="class_m_ndisk_1a6139c74d96cc745363923f4581070897" kindref="member">h</ref>*<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>/M_PI*(<ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref>*R*R<sp/>+<sp/>(<ref refid="class_m_ndisk_1a6173104bbac743368588c8057ee7e72b" kindref="member">a</ref><sp/>+<sp/>3.0*Z)*Q2)/(<sp/>pow(R*R<sp/>+<sp/>Q2,<sp/>2.5)<sp/>*<sp/>Z*Z2<sp/>);</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="197"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight></codeline>
-<codeline lineno="200" refid="class_truncated" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_truncated" kindref="compound">Truncated</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk" kindref="compound">EmpCylSL::AxiDisk</ref></highlight></codeline>
-<codeline lineno="201"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="202" refid="class_truncated_1a2210efcb28dad60d12ec3164ff4a83e6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;EmpCylSL::AxiDisk&gt;<sp/><ref refid="class_truncated_1a2210efcb28dad60d12ec3164ff4a83e6" kindref="member">AxiDiskPtr</ref>;</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="204"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="206" refid="class_truncated_1aef8faab580a1a97db259f60894c4e46a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_truncated_1a2210efcb28dad60d12ec3164ff4a83e6" kindref="member">AxiDiskPtr</ref><sp/><ref refid="class_truncated_1aef8faab580a1a97db259f60894c4e46a" kindref="member">model</ref>;</highlight></codeline>
-<codeline lineno="207" refid="class_truncated_1aae12f9de5ab9da19561001cac7c771fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_truncated_1aae12f9de5ab9da19561001cac7c771fd" kindref="member">rt</ref>,<sp/><ref refid="class_truncated_1accd76b0fa188e2429d06dc140d6cb499" kindref="member">rw</ref>;</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"></highlight></codeline>
-<codeline lineno="209"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211" refid="class_truncated_1af66d8a73dd37e3a7b951c484146f12f0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_truncated_1af66d8a73dd37e3a7b951c484146f12f0" kindref="member">Truncated</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>W,<sp/><ref refid="class_truncated_1a2210efcb28dad60d12ec3164ff4a83e6" kindref="member">AxiDiskPtr</ref><sp/>p)<sp/>:</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_truncated_1aae12f9de5ab9da19561001cac7c771fd" kindref="member">rt</ref>(R),<sp/><ref refid="class_truncated_1accd76b0fa188e2429d06dc140d6cb499" kindref="member">rw</ref>(W),<sp/><ref refid="class_truncated_1aef8faab580a1a97db259f60894c4e46a" kindref="member">model</ref>(p)</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a9f5ac6ec69ca06b68d48b23b6c8c034f" kindref="member">ID</ref><sp/>=<sp/>p-&gt;getID()<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>[truncated]&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_truncated_1aae12f9de5ab9da19561001cac7c771fd" kindref="member">rt</ref>);</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="class_truncated_1accd76b0fa188e2429d06dc140d6cb499" kindref="member">rw</ref>);</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight></codeline>
-<codeline lineno="219" refid="class_truncated_1aaf3541affbceec441a258be79354963b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_truncated_1aaf3541affbceec441a258be79354963b" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi=0.)</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_truncated_1aef8faab580a1a97db259f60894c4e46a" kindref="member">model</ref>)(R,<sp/>z,<sp/>phi)<sp/>*<sp/>erf(<sp/>(<ref refid="class_truncated_1aae12f9de5ab9da19561001cac7c771fd" kindref="member">rt</ref><sp/>-<sp/>sqrt(R*R<sp/>+<sp/>z*z))/<ref refid="class_truncated_1accd76b0fa188e2429d06dc140d6cb499" kindref="member">rw</ref><sp/>);</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224"><highlight class="normal">};</highlight></codeline>
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-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>.push_back(<ref refid="classdiskbulge_1a618355c67a81523e0fe70316a88d75f2" kindref="member">Mfac</ref>);</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="245"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sh<sp/>=<sp/>1.0/cosh(z/<ref refid="classdiskbulge_1ab1fe99c10c0eaf439fe3f8d57bcb9fa8" kindref="member">h</ref>);</highlight></codeline>
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-<codeline lineno="272"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="277"><highlight class="normal"></highlight></codeline>
-<codeline lineno="278"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"></highlight></codeline>
-<codeline lineno="280"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/DiskModels.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_disk_with_halo_8_h.xml b/doxyxml/_disk_with_halo_8_h.xml
deleted file mode 100644
index e028582..0000000
--- a/doxyxml/_disk_with_halo_8_h.xml
+++ /dev/null
@@ -1,551 +0,0 @@
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-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="1" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="35" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="43" relation="include">
-        </childnode>
-        <childnode refid="44" relation="include">
-        </childnode>
-      </node>
-      <node id="35">
-        <label>/home/weinberg/Projects/EXP/include/mestel.H</label>
-        <link refid="mestel_8_h"/>
-      </node>
-      <node id="36">
-        <label>/home/weinberg/Projects/EXP/include/plummer.H</label>
-        <link refid="plummer_8_h"/>
-      </node>
-      <node id="25">
-        <label>/home/weinberg/Projects/EXP/include/sphereSL.H</label>
-        <link refid="sphere_s_l_8_h"/>
-      </node>
-      <node id="37">
-        <label>/home/weinberg/Projects/EXP/include/toomre.H</label>
-        <link refid="toomre_8_h"/>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/src/CBDisk.H</label>
-        <link refid="_c_b_disk_8_h"/>
-      </node>
-      <node id="17">
-        <label>/home/weinberg/Projects/EXP/src/CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="18">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="19">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="38">
-        <label>/home/weinberg/Projects/EXP/src/Direct.H</label>
-        <link refid="_direct_8_h"/>
-      </node>
-      <node id="21">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/FlatDisk.H</label>
-        <link refid="_flat_disk_8_h"/>
-      </node>
-      <node id="22">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
-      </node>
-      <node id="7">
-        <label>/home/weinberg/Projects/EXP/src/PolarBasis.H</label>
-        <link refid="_polar_basis_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="39">
-        <label>/home/weinberg/Projects/EXP/src/Shells.H</label>
-        <link refid="_shells_8_h"/>
-      </node>
-      <node id="26">
-        <label>/home/weinberg/Projects/EXP/src/SlabSL.H</label>
-        <link refid="_slab_s_l_8_h"/>
-      </node>
-      <node id="27">
-        <label>/home/weinberg/Projects/EXP/src/Sphere.H</label>
-        <link refid="_sphere_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>/home/weinberg/Projects/EXP/src/TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="40">
-        <label>/home/weinberg/Projects/EXP/src/externalShock.H</label>
-        <link refid="external_shock_8_h"/>
-      </node>
-      <node id="28">
-        <label>/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H</label>
-        <link refid="_sph_s_l_8_h"/>
-      </node>
-      <node id="41">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/AddDisk.H</label>
-        <link refid="_add_disk_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-      </node>
-      <node id="42">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/AddSpheres.H</label>
-        <link refid="_add_spheres_8_h"/>
-      </node>
-      <node id="23">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H</label>
-        <link refid="_cyl_disk_8_h"/>
-      </node>
-      <node id="9">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H</label>
-        <link refid="_disk2d_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</label>
-        <link refid="_disk2d_halo_8_h"/>
-      </node>
-      <node id="16">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H</label>
-        <link refid="_disk_eval_8_h"/>
-      </node>
-      <node id="24">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</label>
-        <link refid="_disk_halo_8_h"/>
-      </node>
-      <node id="29">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H</label>
-        <link refid="_spherical_s_l_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-      </node>
-      <node id="43">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H</label>
-        <link refid="massmodel1d_8_h"/>
-      </node>
-      <node id="44">
-        <label>/home/weinberg/Projects/EXP/utils/PhaseSpace/MakeModel.H</label>
-        <link refid="_make_model_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_disk_with_halo" prot="public">DiskWithHalo</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Two<sp/>dimensional<sp/>disk<sp/>with<sp/>surrounding<sp/>halo</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_DiskWithHalo_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_DiskWithHalo_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="class_disk_with_halo" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_disk_with_halo" kindref="compound">DiskWithHalo</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="11"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="14" refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>;</highlight></codeline>
-<codeline lineno="15" refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Null<sp/>constructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_disk_with_halo_1af2d9d93b9ff0164985f33db2f666ae0a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_with_halo_1af2d9d93b9ff0164985f33db2f666ae0a" kindref="member">DiskWithHalo</ref>()<sp/>:<sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>(0),<sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>(0)<sp/>{}</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Useful<sp/>constructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="class_disk_with_halo_1af7007bf28863d9a11dab396ba123c1d5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_with_halo_1af7007bf28863d9a11dab396ba123c1d5" kindref="member">DiskWithHalo</ref>(std::shared_ptr&lt;AxiSymModel&gt;<sp/>D,<sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/>H)<sp/></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>D;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>H;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;DiskAndHalo<sp/>[&quot;</highlight><highlight class="normal"><sp/>+<sp/>D-&gt;ModelID<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>+<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>H-&gt;ModelID<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;]&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Copy<sp/>constructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_disk_with_halo_1acd9e6c29b53f51e98397c52978c66241" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_disk_with_halo_1acd9e6c29b53f51e98397c52978c66241" kindref="member">DiskWithHalo</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo" kindref="compound">DiskWithHalo</ref>&amp;<sp/>t)<sp/></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>t.<ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>t.<ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/>t.<ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref>;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_disk_with_halo_1a145b49523bfd5c4884a25a42002007a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a145b49523bfd5c4884a25a42002007a7" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="45"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>-&gt;get_mass(r);<sp/>}</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_disk_with_halo_1a90dc033f414be9f3c41ee0c0fad633bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a90dc033f414be9f3c41ee0c0fad633bc" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="48"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>-&gt;get_density(r);<sp/>}</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_disk_with_halo_1abb298a3eff91de4660de03ec7e8c8a75" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1abb298a3eff91de4660de03ec7e8c8a75" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="51"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>-&gt;get_pot(r)<sp/>+<sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>-&gt;get_pot(r);<sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_disk_with_halo_1a298f24fcd27cf5f837c18e52eafdc106" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a298f24fcd27cf5f837c18e52eafdc106" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="55"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>-&gt;get_dpot(r)<sp/>+<sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>-&gt;get_dpot(r);<sp/>}</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57" refid="class_disk_with_halo_1a83af39a3f1f0eaaae16e9d6a54e57de3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a83af39a3f1f0eaaae16e9d6a54e57de3" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="58"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>-&gt;get_dpot2(r)<sp/>+<sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>-&gt;get_dpot2(r);<sp/>}</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_disk_with_halo_1a522ab0472483200d97e5d9c18f437116" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a522ab0472483200d97e5d9c18f437116" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="61"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ur1,<sp/>dur1,<sp/>ur2,<sp/>dur2;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>-&gt;get_pot_dpot(r,<sp/>ur1,<sp/>dur1);</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>-&gt;get_pot_dpot(r,<sp/>ur2,<sp/>dur2);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/>ur<sp/><sp/>=<sp/>ur1<sp/><sp/>+<sp/>ur2;</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/>dur<sp/>=<sp/>dur1<sp/>+<sp/>dur2;</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="69" refid="class_disk_with_halo_1a68515654dbe5f8d4d27fdd5d4cc3bfcf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a68515654dbe5f8d4d27fdd5d4cc3bfcf" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="70"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a145b49523bfd5c4884a25a42002007a7" kindref="member">get_mass</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="72" refid="class_disk_with_halo_1ab499a49471cc87ecb12638adce08a15d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1ab499a49471cc87ecb12638adce08a15d" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="73"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a90dc033f414be9f3c41ee0c0fad633bc" kindref="member">get_density</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="75" refid="class_disk_with_halo_1ab713038bfeeee6c0abc96760fa6f0a1f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1ab713038bfeeee6c0abc96760fa6f0a1f" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="76"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1abb298a3eff91de4660de03ec7e8c8a75" kindref="member">get_pot</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_disk_with_halo_1ad319d4ea72ea88dfcd0c3b0e1e37f07d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1ad319d4ea72ea88dfcd0c3b0e1e37f07d" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="81"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>max&lt;double&gt;(<ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>-&gt;get_min_radius(),<sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>-&gt;get_min_radius());</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="84" refid="class_disk_with_halo_1a62e38f166a9a04cee6f4a7361114a444" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a62e38f166a9a04cee6f4a7361114a444" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="85"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>min&lt;double&gt;(<ref refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" kindref="member">d</ref>-&gt;get_max_radius(),<sp/><ref refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" kindref="member">h</ref>-&gt;get_max_radius());</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_disk_with_halo_1a47949ec45a68566a57d65c737dfbe6df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a47949ec45a68566a57d65c737dfbe6df" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)</highlight><highlight class="keyword"><sp/>override<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94" refid="class_disk_with_halo_1a7dc15ec4c77e2364412dcaf54003da54" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a7dc15ec4c77e2364412dcaf54003da54" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)</highlight><highlight class="keyword"><sp/>override<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_disk_with_halo_1a41bbb6d6bc1fb19553e1ed43e67dbd37" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a41bbb6d6bc1fb19553e1ed43e67dbd37" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)</highlight><highlight class="keyword"><sp/>override<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="104" refid="class_disk_with_halo_1a99b80f19dfa533b08c3c57d6c3d834fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_disk_with_halo_1a99b80f19dfa533b08c3c57d6c3d834fd" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)</highlight><highlight class="keyword"><sp/>override<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_e_jcom_8_h.xml b/doxyxml/_e_jcom_8_h.xml
deleted file mode 100644
index 4f6a831..0000000
--- a/doxyxml/_e_jcom_8_h.xml
+++ /dev/null
@@ -1,803 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_e_jcom_8_h" kind="file" language="C++">
-    <compoundname>EJcom.H</compoundname>
-    <includes refid="_two_center_8_h" local="no">TwoCenter.H</includes>
-    <incdepgraph>
-      <node id="62">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="63" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="75">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="52" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-      </node>
-      <node id="76">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="27">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="72">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-      </node>
-      <node id="79">
-        <label>EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="68" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="63" relation="include">
-        </childnode>
-        <childnode refid="80" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="82" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="80">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="81" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="51">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="52" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="53" relation="include">
-        </childnode>
-      </node>
-      <node id="26">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="53">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="54" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-      </node>
-      <node id="64">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="40">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="63">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-      </node>
-      <node id="41">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-      </node>
-      <node id="82">
-        <label>coef.H</label>
-        <link refid="include_2coef_8_h"/>
-      </node>
-      <node id="50">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="23">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="73">
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-        <label>ParticleFerry.H</label>
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-        <label>PotAccel.H</label>
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-        <label>TwoCenter.H</label>
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-      <node id="65">
-        <label>expand.H</label>
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-        <label>global.H</label>
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-        <label>CoefContainer.H</label>
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-        <label>Coefficients.H</label>
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-        <label>Eigen/Eigen</label>
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-        <label>Particle.H</label>
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-        <label>algorithm</label>
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-        <label>array</label>
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-        <label>assert.h</label>
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-        <label>chrono</label>
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-        <label>cmath</label>
-      </node>
-      <node id="11">
-        <label>config_exp.h</label>
-      </node>
-      <node id="25">
-        <label>cstdlib</label>
-      </node>
-      <node id="67">
-        <label>cstring</label>
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-        <label>deque</label>
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-    </briefdescription>
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-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_EJcom_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_EJcom_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_two_center_8_h" kindref="compound">TwoCenter.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="28"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_e_jcom_1abd1df7ac5f23130697cf19f064a5766a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_e_jcom_1abd1df7ac5f23130697cf19f064a5766a" kindref="member">cfac</ref>;</highlight></codeline>
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-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_e_jcom_1abf361e399dffa6ce2ef7e05e2c5b147a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_e_jcom_1abf361e399dffa6ce2ef7e05e2c5b147a" kindref="member">initialize</ref>();</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_e_jcom_1ae04818161d9df4becfdd3d34146ec8ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_e_jcom_1ae04818161d9df4becfdd3d34146ec8ac" kindref="member">mixture</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>p);</highlight></codeline>
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-<codeline lineno="55"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/EJcom.H"/>
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diff --git a/doxyxml/_e_x_p_exception_8_h.xml b/doxyxml/_e_x_p_exception_8_h.xml
deleted file mode 100644
index 7d2fa3e..0000000
--- a/doxyxml/_e_x_p_exception_8_h.xml
+++ /dev/null
@@ -1,466 +0,0 @@
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-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="82"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
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-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/>this-&gt;<ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref><sp/>=<sp/>linenumber;<sp/></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/>this-&gt;<ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>;</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/>this-&gt;<ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>;</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" kindref="member">exceptionname</ref>;</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref>;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref>;</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101" refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104" refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="108" refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>;</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>;</highlight></codeline>
-<codeline lineno="112"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115" refid="class_generic_error" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_generic_error" kindref="compound">GenericError</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref></highlight></codeline>
-<codeline lineno="116"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="119"></codeline>
-<codeline lineno="120" refid="class_generic_error_1a642e05b0950ff31edb4b6389e2cec337" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_generic_error_1a642e05b0950ff31edb4b6389e2cec337" kindref="member">GenericError</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>msg,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>=-1,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref>(<ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>,<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>)</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" kindref="member">exceptionname</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Execution<sp/>Exception&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/>std::ostringstream<sp/>ostr;<sp/>ostr<sp/>&lt;&lt;<sp/>msg<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;.&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/>=<sp/>ostr.str();</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Assemble<sp/>and<sp/>store<sp/>the<sp/>error<sp/>message</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="132"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135" refid="class_internal_error" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_internal_error" kindref="compound">InternalError</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref></highlight></codeline>
-<codeline lineno="136"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="139"></codeline>
-<codeline lineno="140" refid="class_internal_error_1a9ea443f990a04185c7ce331a15d22ebb" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_internal_error_1a9ea443f990a04185c7ce331a15d22ebb" kindref="member">InternalError</ref></highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>=-1,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>=</highlight><highlight class="keyword">true</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref>(<ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>,<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>)</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" kindref="member">exceptionname</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Internal<sp/>Error<sp/>Exception&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Execution<sp/>reached<sp/>a<sp/>state<sp/>that<sp/>should<sp/>not<sp/>reachable.&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151" refid="class_internal_error_1a371d8f1ac6e04de446c3d909915cd242" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_internal_error_1a371d8f1ac6e04de446c3d909915cd242" kindref="member">InternalError</ref></highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>msg,</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>=-1,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>=</highlight><highlight class="keyword">true</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref>(<ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>,<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>)</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" kindref="member">exceptionname</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Internal<sp/>Error<sp/>Exception&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Execution<sp/>reached<sp/>a<sp/>state<sp/>that<sp/>should<sp/>not<sp/>reachable.<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>+<sp/><sp/>msg<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;.&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="164"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167" refid="class_bad_index_exception" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_bad_index_exception" kindref="compound">BadIndexException</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref></highlight></codeline>
-<codeline lineno="168"><highlight class="normal">{<sp/></highlight></codeline>
-<codeline lineno="169"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="171" refid="class_bad_index_exception_1ade06db40b165a1977c58926df9718799" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_bad_index_exception_1ade06db40b165a1977c58926df9718799" kindref="member">BadIndexException</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>index,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>num,</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>=-1,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>=</highlight><highlight class="keyword">true</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref>(<ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>,<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>)</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" kindref="member">exceptionname</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Requested<sp/>index<sp/>is<sp/>not<sp/>in<sp/>PartMap:<sp/>&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Invalid<sp/>index:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>index<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>out<sp/>of<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>num<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>particles&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/>=<sp/>sout.str();</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"></highlight></codeline>
-<codeline lineno="184"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"></highlight></codeline>
-<codeline lineno="187" refid="class_file_create_error" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_file_create_error" kindref="compound">FileCreateError</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref></highlight></codeline>
-<codeline lineno="188"><highlight class="normal">{<sp/></highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,</highlight></codeline>
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-<codeline lineno="200"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"></highlight></codeline>
-<codeline lineno="203" refid="class_file_create_error_1ae117ad5553d6873129b252e2dbbad325" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_file_create_error_1ae117ad5553d6873129b252e2dbbad325" kindref="member">FileCreateError</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>filename,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>method,</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,</highlight></codeline>
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-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref>(<ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>,<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>)</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
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-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;File<sp/>name<sp/>is<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>+<sp/>filename<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
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-<codeline lineno="213"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="217" refid="class_file_open_error" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_file_open_error" kindref="compound">FileOpenError</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref></highlight></codeline>
-<codeline lineno="218"><highlight class="normal">{<sp/></highlight></codeline>
-<codeline lineno="219"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="221" refid="class_file_open_error_1af38477ce6a614e444385c4c6fbdb3cce" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_file_open_error_1af38477ce6a614e444385c4c6fbdb3cce" kindref="member">FileOpenError</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>filename,</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,</highlight></codeline>
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-<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref>(<ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>,<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>)</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" kindref="member">exceptionname</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Cannot<sp/>open<sp/>existing<sp/>file&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;File<sp/>name<sp/>is<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>+<sp/>filename<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"></highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233" refid="class_file_open_error_1a0607ea472b0ab159e178c086a19037e3" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_file_open_error_1a0607ea472b0ab159e178c086a19037e3" kindref="member">FileOpenError</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>filename,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>method,</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>=-1,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref>(<ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>,<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>)</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" kindref="member">exceptionname</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;Cannot<sp/>open<sp/>existing<sp/>file<sp/>in<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>method;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;File<sp/>name<sp/>is<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>+<sp/>filename<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="243"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="244"><highlight class="normal"></highlight></codeline>
-<codeline lineno="246" refid="class_yaml_config_error" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_yaml_config_error" kindref="compound">YamlConfigError</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref></highlight></codeline>
-<codeline lineno="247"><highlight class="normal">{<sp/></highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="250" refid="class_yaml_config_error_1a6e0047ddac6bf920e374409c68c39658" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_yaml_config_error_1a6e0047ddac6bf920e374409c68c39658" kindref="member">YamlConfigError</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>classname,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>type,</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/>keys,</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>=-1,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="class_e_x_p_exception" kindref="compound">EXPException</ref>(<ref refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" kindref="member">sourcefilename</ref>,<sp/><ref refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" kindref="member">sourcelinenumber</ref>,<sp/><ref refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" kindref="member">errorcode</ref>,<sp/><ref refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" kindref="member">deadlock</ref>)</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" kindref="member">exceptionname</ref><sp/>=<sp/>classname<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>unmatched<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>type<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>configuration<sp/>keys&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&lt;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>s<sp/>:<sp/>keys)<sp/>{</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref>.size()&gt;1)<sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;<sp/>&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/>+=<sp/>s;</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" kindref="member">errormessage</ref><sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"></highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" kindref="member">msg_</ref><sp/>=<sp/><ref refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" kindref="member">getErrorMessage</ref>();</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="266"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="267"><highlight class="normal"></highlight></codeline>
-<codeline lineno="268"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/EXPException.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_e_x_pini_8_h.xml b/doxyxml/_e_x_pini_8_h.xml
deleted file mode 100644
index 012a7ad..0000000
--- a/doxyxml/_e_x_pini_8_h.xml
+++ /dev/null
@@ -1,335 +0,0 @@
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-    <compoundname>EXPini.H</compoundname>
-    <includes local="no">algorithm</includes>
-    <includes local="no">typeinfo</includes>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">fstream</includes>
-    <includes local="no">sstream</includes>
-    <includes local="no">cstring</includes>
-    <includes local="no">yaml-cpp/yaml.h</includes>
-    <includes refid="cxxopts_8_h" local="no">cxxopts.H</includes>
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-        <label>/home/weinberg/Projects/EXP/include/EXPini.H</label>
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-        <childnode refid="10" relation="include">
-        </childnode>
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-        <link refid="cxxopts_8_h"/>
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-        </childnode>
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-        <label>iomanip</label>
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-        <label>limits</label>
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-        <type><ref refid="classcxxopts_1_1_parse_result" kindref="compound">cxxopts::ParseResult</ref></type>
-        <definition>cxxopts::ParseResult LoadConfig</definition>
-        <argsstring>(cxxopts::Options &amp;options, const std::string &amp;config)</argsstring>
-        <name>LoadConfig</name>
-        <param>
-          <type><ref refid="classcxxopts_1_1_options" kindref="compound">cxxopts::Options</ref> &amp;</type>
-          <declname>options</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>config</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Read the YAML parameter config file and load the cxxopts database with parameters </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPini.H" line="85" column="22" bodyfile="/home/weinberg/Projects/EXP/include/EXPini.H" bodystart="85" bodyend="137"/>
-        <references refid="classcxxopts_1_1_options_1a3e740564cc4c991078f1451e1fcd082b" compoundref="cxxopts_8_h" startline="2288" endline="2293">cxxopts::Options::parse</references>
-      </memberdef>
-      <memberdef kind="function" id="_e_x_pini_8_h_1a1190b0cc579cdc4da84460ace376bad8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SaveConfig</definition>
-        <argsstring>(const cxxopts::ParseResult &amp;vm, const cxxopts::Options &amp;options, const std::string &amp;config, const std::vector&lt; std::string &gt; groups={&quot;&quot;}, const std::vector&lt; std::string &gt; exclude={&quot;help&quot;, &quot;template&quot;, &quot;expert&quot;, &quot;config&quot;})</argsstring>
-        <name>SaveConfig</name>
-        <param>
-          <type>const <ref refid="classcxxopts_1_1_parse_result" kindref="compound">cxxopts::ParseResult</ref> &amp;</type>
-          <declname>vm</declname>
-        </param>
-        <param>
-          <type>const <ref refid="classcxxopts_1_1_options" kindref="compound">cxxopts::Options</ref> &amp;</type>
-          <declname>options</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>config</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; std::string &gt;</type>
-          <declname>groups</declname>
-          <defval>{&quot;&quot;}</defval>
-        </param>
-        <param>
-          <type>const std::vector&lt; std::string &gt;</type>
-          <declname>exclude</declname>
-          <defval>{&quot;help&quot;, &quot;template&quot;, &quot;expert&quot;, &quot;config&quot;}</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Saves the current command-line cxxopts database in YAML format for user configuration. For ease, the current convention is that all vector-values options will be stored as strings, and converted by the calling program to the correct value internally. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPini.H" line="20" column="6" bodyfile="/home/weinberg/Projects/EXP/include/EXPini.H" bodystart="20" bodyend="80"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_EXPini_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_EXPini_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;algorithm&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;typeinfo&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;sstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstring&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;yaml-cpp/yaml.h&gt;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>YAML<sp/>support</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="cxxopts_8_h" kindref="compound">cxxopts.H</ref>&gt;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Option<sp/>parser</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="_e_x_pini_8_h_1a1190b0cc579cdc4da84460ace376bad8" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="_e_x_pini_8_h_1a1190b0cc579cdc4da84460ace376bad8" kindref="member">SaveConfig</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">cxxopts::ParseResult</ref>&amp;<sp/>vm,<sp/><sp/></highlight><highlight class="comment">//<sp/>Parsed<sp/>options</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_options" kindref="compound">cxxopts::Options</ref>&amp;<sp/>options,<sp/></highlight><highlight class="comment">//<sp/>Default<sp/>options</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>config,<sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Save<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Option<sp/>groups<sp/>to<sp/>save,<sp/>default<sp/>by<sp/>default</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/>groups={</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">},</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters<sp/>to<sp/>exclude</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/>exclude={</highlight><highlight class="stringliteral">&quot;help&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;template&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;expert&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">})</highlight></codeline>
-<codeline lineno="27"><highlight class="normal">{<sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/>YAML::Emitter<sp/>out;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/>out<sp/>&lt;&lt;<sp/>YAML::BeginMap;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/>YAML::Node<sp/>node;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>sep<sp/>=<sp/>std::string(20,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>kv:<sp/>vm)<sp/>{</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Iterate<sp/>through<sp/>option<sp/>groups</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>g<sp/>:<sp/>options.groups())<sp/>{</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Look<sp/>for<sp/>group<sp/>in<sp/>include<sp/>list</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>it<sp/>=<sp/>std::find(groups.begin(),<sp/>groups.end(),<sp/>g);</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Found<sp/>it:<sp/>look<sp/>for<sp/>key<sp/>in<sp/>option<sp/>list<sp/>for<sp/>this<sp/>group</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it<sp/>!=<sp/>groups.end())<sp/>{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>m<sp/>:<sp/>options.group_help(g).options)<sp/>{</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m.l<sp/>==<sp/>kv.key())<sp/>{</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Is<sp/>this<sp/>key<sp/>in<sp/>the<sp/>excluded<sp/>list?</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>jt<sp/>=<sp/>std::find(exclude.begin(),<sp/>exclude.end(),<sp/>kv.key());</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Not<sp/>excluded:<sp/>write<sp/>to<sp/>template<sp/>file<sp/>with<sp/>desc<sp/>as<sp/>comments</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(jt<sp/>==<sp/>exclude.end())<sp/>{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Write<sp/>the<sp/>key<sp/>and<sp/>then<sp/>check<sp/>the<sp/>value</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/>YAML::Key<sp/>&lt;&lt;<sp/>kv.key();</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Are<sp/>we<sp/>a<sp/>vector?</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">typeid</highlight><highlight class="normal">(kv.value())<sp/>==<sp/></highlight><highlight class="keyword">typeid</highlight><highlight class="normal">(std::vector&lt;std::string&gt;))<sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/>YAML::BeginSeq;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/>kv.value();</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/>YAML::EndSeq;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>We<sp/>are<sp/>a<sp/>scalar</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/>YAML::Value<sp/>&lt;&lt;<sp/>kv.value();</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/>YAML::Comment(m.desc);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/>out<sp/>&lt;&lt;<sp/>YAML::EndMap;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/>std::ofstream<sp/>temp(config);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(temp)</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/>temp<sp/>&lt;&lt;<sp/>out.c_str();</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Could<sp/>not<sp/>save<sp/>template<sp/>file<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>config<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85" refid="_e_x_pini_8_h_1a4b6bc508ca919bbf0106b9e052494e7d" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_parse_result" kindref="compound">cxxopts::ParseResult</ref><sp/><ref refid="_e_x_pini_8_h_1a4b6bc508ca919bbf0106b9e052494e7d" kindref="member">LoadConfig</ref>(<ref refid="classcxxopts_1_1_options" kindref="compound">cxxopts::Options</ref>&amp;<sp/>options,</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>config)</highlight></codeline>
-<codeline lineno="87"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/>YAML::Node<sp/>conf<sp/>=<sp/>YAML::LoadFile(config);</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>count<sp/>=<sp/>conf.size()*2+1;</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/>std::vector&lt;char*&gt;<sp/>data(count);</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cnt<sp/>=<sp/>1;</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/>data[0]<sp/>=<sp/></highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>[11];</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/>strcpy(data[0],<sp/></highlight><highlight class="stringliteral">&quot;LoadConfig&quot;</highlight><highlight class="normal">);<sp/></highlight><highlight class="comment">//<sp/>Emulate<sp/>the<sp/>caller<sp/>name</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>it=conf.begin();<sp/>it!=conf.end();<sp/>it++)<sp/>{</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/>std::ostringstream<sp/>s1,<sp/>s2;</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/>s1<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;--&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>it-&gt;first.as&lt;std::string&gt;();</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Are<sp/>we<sp/>vector<sp/>valued?</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it-&gt;second.IsSequence())<sp/>{</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>jt=it-&gt;second.begin();<sp/>jt!=it-&gt;second.end();<sp/>jt++)<sp/>{</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(jt<sp/>!=<sp/>it-&gt;second.begin())<sp/>s2<sp/>&lt;&lt;<sp/></highlight><highlight class="charliteral">&apos;,&apos;</highlight><highlight class="normal">;<sp/></highlight><highlight class="comment">//<sp/>Add<sp/>the<sp/>comma</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>s2<sp/>&lt;&lt;<sp/>jt-&gt;as&lt;std::string&gt;();<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Add<sp/>the<sp/>element</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>We<sp/>are<sp/>scalar<sp/>valued</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>s2<sp/>&lt;&lt;<sp/>it-&gt;second.as&lt;std::string&gt;();</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Check<sp/>key<sp/>for<sp/>a<sp/>yaml<sp/>boolean<sp/>type<sp/>and<sp/>exclude<sp/>false<sp/>values<sp/>to</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>comply<sp/>with<sp/>cxxopts<sp/>policy</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/>val<sp/>=<sp/>s2.str();</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/>std::transform(val.begin(),<sp/>val.end(),<sp/>val.begin(),</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>[](</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>c){<sp/>return<sp/>std::tolower(c);<sp/>});</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(val.find(</highlight><highlight class="stringliteral">&quot;false&quot;</highlight><highlight class="normal">)<sp/>and<sp/>val.find(</highlight><highlight class="stringliteral">&quot;off&quot;</highlight><highlight class="normal">)<sp/>and<sp/>val.find(</highlight><highlight class="stringliteral">&quot;no&quot;</highlight><highlight class="normal">))<sp/>{</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>data[cnt+0]<sp/>=<sp/></highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>[s1.str().size()+1];</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>data[cnt+1]<sp/>=<sp/></highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>[s2.str().size()+1];</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>strcpy(data[cnt+0],<sp/>s1.str().c_str());</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>strcpy(data[cnt+1],<sp/>s2.str().c_str());</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>cnt<sp/>+=<sp/>2;</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>vm<sp/>=<sp/>options.<ref refid="classcxxopts_1_1_options_1a3e740564cc4c991078f1451e1fcd082b" kindref="member">parse</ref>(cnt,<sp/>&amp;data[0]);</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>&amp;<sp/>v<sp/>:<sp/>data)<sp/></highlight><highlight class="keyword">delete</highlight><highlight class="normal"><sp/>[]<sp/>v;</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>vm;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/EXPini.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_e_x_pmath_8_h.xml b/doxyxml/_e_x_pmath_8_h.xml
deleted file mode 100644
index 84abee1..0000000
--- a/doxyxml/_e_x_pmath_8_h.xml
+++ /dev/null
@@ -1,118 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_e_x_pmath_8_h" kind="file" language="C++">
-    <compoundname>EXPmath.H</compoundname>
-    <includedby refid="_emp_cyl2d_8_h" local="no">/home/weinberg/Projects/EXP/include/EmpCyl2d.H</includedby>
-    <includedby refid="_q_d_h_t_8_h" local="no">/home/weinberg/Projects/EXP/include/QDHT.H</includedby>
-    <includedby refid="_bess_8_h" local="no">/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H</includedby>
-    <invincdepgraph>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/include/BiorthCube.H</label>
-        <link refid="_biorth_cube_8_h"/>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/include/BiorthCyl.H</label>
-        <link refid="_biorth_cyl_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/EXPmath.H</label>
-        <link refid="_e_x_pmath_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/EmpCyl2d.H</label>
-        <link refid="_emp_cyl2d_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>/home/weinberg/Projects/EXP/include/PotRZ.H</label>
-        <link refid="_pot_r_z_8_h"/>
-      </node>
-      <node id="10">
-        <label>/home/weinberg/Projects/EXP/include/QDHT.H</label>
-        <link refid="_q_d_h_t_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>/home/weinberg/Projects/EXP/src/CBDisk.H</label>
-        <link refid="_c_b_disk_8_h"/>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/FlatDisk.H</label>
-        <link refid="_flat_disk_8_h"/>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/PolarBasis.H</label>
-        <link refid="_polar_basis_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H</label>
-        <link refid="_disk2d_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</label>
-        <link refid="_disk2d_halo_8_h"/>
-      </node>
-      <node id="12">
-        <label>/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H</label>
-        <link refid="_bess_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innernamespace refid="namespace_alt_math">AltMath</innernamespace>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>Work<sp/>around<sp/>for<sp/>incomplete<sp/>C++17<sp/>special<sp/>function<sp/>implementations.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Yes,<sp/>CLANG,<sp/>I<sp/>mean<sp/>you!<sp/><sp/>Come<sp/>on...</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="comment">//<sp/>If<sp/>you<sp/>are<sp/>using<sp/>anything<sp/>but<sp/>CLANG,<sp/>you<sp/>will<sp/>get<sp/>the<sp/>C++17<sp/>STL</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="comment">//<sp/>implementation<sp/>of<sp/>special<sp/>functions.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_EXPmath_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_EXPmath_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="namespace_alt_math" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespace_alt_math" kindref="compound">AltMath</ref></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="13" refid="namespace_alt_math_1ac42ad664c538dbbdded58b375019a34e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="namespace_alt_math_1ac42ad664c538dbbdded58b375019a34e" kindref="member">cyl_bessel_i</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>nu,<sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="14" refid="namespace_alt_math_1aaa2e959ee26a82a285ec0809aebf0d3a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="namespace_alt_math_1aaa2e959ee26a82a285ec0809aebf0d3a" kindref="member">cyl_bessel_j</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>nu,<sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="15" refid="namespace_alt_math_1a29ac5a4960bc49847b8955bd2f449d3c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="namespace_alt_math_1a29ac5a4960bc49847b8955bd2f449d3c" kindref="member">cyl_bessel_k</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>nu,<sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="16" refid="namespace_alt_math_1ab1f245db359cef31db6898333186bb97" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="namespace_alt_math_1ab1f245db359cef31db6898333186bb97" kindref="member">sph_bessel</ref><sp/><sp/><sp/><sp/>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="17" refid="namespace_alt_math_1a4351f4a311e7737d65583bab04db5ed7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="namespace_alt_math_1a4351f4a311e7737d65583bab04db5ed7" kindref="member">assoc_laguerre</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="18"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>__clang__</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal">EXPmath<sp/>=<sp/><ref refid="namespace_alt_math" kindref="compound">AltMath</ref>;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal">EXPmath<sp/>=<sp/>std;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/EXPmath.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_ellip_force_8_h.xml b/doxyxml/_ellip_force_8_h.xml
deleted file mode 100644
index dc40925..0000000
--- a/doxyxml/_ellip_force_8_h.xml
+++ /dev/null
@@ -1,153 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_ellip_force_8_h" kind="file" language="C++">
-    <compoundname>EllipForce.H</compoundname>
-    <includes local="no">algorithm</includes>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">vector</includes>
-    <includes refid="interp_8_h" local="no">interp.H</includes>
-    <includes refid="gauss_q_8_h" local="no">gaussQ.H</includes>
-    <incdepgraph>
-      <node id="10">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H</label>
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diff --git a/doxyxml/_ellipsoid_force_8_h.xml b/doxyxml/_ellipsoid_force_8_h.xml
deleted file mode 100644
index 9d786de..0000000
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-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1aff5954ab3dc083491905305605e6faa4" kindref="member">rmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1a525a4f889a4aabbcceca35d8b780efef" kindref="member">rmax</ref>,</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33c" kindref="member">BarType</ref><sp/><ref refid="class_ellipsoid_force_1a36df456e74b9790499745d649c4b8c1d" kindref="member">bartype</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>quad,<sp/></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1accbdb1be0c8442d1f6aaed133fb4856f" kindref="member">param</ref>=0.0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1aa8fa477ca941c463835d5d29d8641fa3" kindref="member">num</ref>=100,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1ac090ea97bcb5b27be3fc0dfcee12c93e" kindref="member">numr</ref>=100);</highlight></codeline>
-<codeline lineno="93" refid="class_ellipsoid_force_1a120074a67c9ab1b47c6a05f1cd93c450" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ellipsoid_force_1a120074a67c9ab1b47c6a05f1cd93c450" kindref="member">~EllipsoidForce</ref>();</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="class_ellipsoid_force_1aa42079cab4f8cd532947ac1ac3804fa2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1aa42079cab4f8cd532947ac1ac3804fa2" kindref="member">MassInertia</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>M,<sp/>vector&lt;double&gt;&amp;<sp/>I);</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_ellipsoid_force_1ab578edab3c3c4dbafdb2ccfd2f5285eb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1ab578edab3c3c4dbafdb2ccfd2f5285eb" kindref="member">getPotl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_ellipsoid_force_1ad874304164b322fe14b3e4493f256b1b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1ad874304164b322fe14b3e4493f256b1b" kindref="member">getDens</ref>(vector&lt;double&gt;<sp/>x);</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_ellipsoid_force_1acc1c5319988e189de2b06d05ca788a42" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1acc1c5319988e189de2b06d05ca788a42" kindref="member">getSurfDens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_ellipsoid_force_1a0439ca49090c9610d5c33840a54cf4cb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1a0439ca49090c9610d5c33840a54cf4cb" kindref="member">RhoBar</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_ellipsoid_force_1a9437c95881b78c60412c6b42c4fc1aca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1a9437c95881b78c60412c6b42c4fc1aca" kindref="member">U22</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117" refid="class_ellipsoid_force_1acef730680da86abf64b745775abd293f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1acef730680da86abf64b745775abd293f" kindref="member">quadpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>f,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>fr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>M);</highlight></codeline>
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-<codeline lineno="120" refid="class_ellipsoid_force_1a26363e415fec56f09cfaecf8fd035263" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ellipsoid_force_1a26363e415fec56f09cfaecf8fd035263" kindref="member">MakeTable</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n1,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n2,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n3);</highlight></codeline>
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-<codeline lineno="124"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>EllipsoidForce</highlight><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_emp_cyl2d_8_h.xml b/doxyxml/_emp_cyl2d_8_h.xml
deleted file mode 100644
index 6993c6b..0000000
--- a/doxyxml/_emp_cyl2d_8_h.xml
+++ /dev/null
@@ -1,663 +0,0 @@
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-    <includedby refid="_biorth_cube_8_h" local="no">/home/weinberg/Projects/EXP/include/BiorthCube.H</includedby>
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-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/CBDisk.H</label>
-        <link refid="_c_b_disk_8_h"/>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/src/FlatDisk.H</label>
-        <link refid="_flat_disk_8_h"/>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/PolarBasis.H</label>
-        <link refid="_polar_basis_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H</label>
-        <link refid="_disk2d_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</label>
-        <link refid="_disk2d_halo_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_emp_cyl2d_1_1_basis2d" prot="protected">EmpCyl2d::Basis2d</innerclass>
-    <innerclass refid="class_emp_cyl2d" prot="public">EmpCyl2d</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_expon_cyl" prot="public">EmpCyl2d::ExponCyl</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_kuzmin_cyl" prot="public">EmpCyl2d::KuzminCyl</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_mapping" prot="public">EmpCyl2d::Mapping</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_mestel_cyl" prot="public">EmpCyl2d::MestelCyl</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_model_cyl" prot="public">EmpCyl2d::ModelCyl</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_zang_cyl" prot="public">EmpCyl2d::ZangCyl</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_EmpCyl2d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_EmpCyl2d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;algorithm&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;array&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;tuple&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigenvalues&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;yaml-cpp/yaml.h&gt;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters<sp/>parsing</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>config<sp/>macros</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="gauss_q_8_h" kindref="compound">gaussQ.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_e_x_pmath_8_h" kindref="compound">EXPmath.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="localmpi_8_h" kindref="compound">localmpi.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="comment">//<sp/>For<sp/>reading<sp/>and<sp/>writing<sp/>cache<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;highfive/highfive.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;highfive/eigen.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_emp_cyl2d" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref></highlight></codeline>
-<codeline lineno="30"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_emp_cyl2d_1_1_model_cyl" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl2d_1_1_model_cyl" kindref="compound">ModelCyl</ref></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_emp_cyl2d_1_1_model_cyl_1a8ebbf39ceec61afa0b35ca0b97bed332" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1_1_model_cyl_1a8ebbf39ceec61afa0b35ca0b97bed332" kindref="member">id</ref>;</highlight></codeline>
-<codeline lineno="39" refid="class_emp_cyl2d_1_1_model_cyl_1a590bae8af6992903978f94d799bdd012" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_model_cyl_1a590bae8af6992903978f94d799bdd012" kindref="member">parse</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_emp_cyl2d_1_1_model_cyl_1a0bf2b7f035ab97b7ce38fd7079eadeda" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_model_cyl_1a0bf2b7f035ab97b7ce38fd7079eadeda" kindref="member">pot</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="44" refid="class_emp_cyl2d_1_1_model_cyl_1adc81ff2bbbc92a4130b22a091acf4697" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_model_cyl_1adc81ff2bbbc92a4130b22a091acf4697" kindref="member">dpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="45" refid="class_emp_cyl2d_1_1_model_cyl_1aee9c57bca32e7568d5b8cd07e6db854a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_model_cyl_1aee9c57bca32e7568d5b8cd07e6db854a" kindref="member">dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_emp_cyl2d_1_1_model_cyl_1a33ddabc3a850b26ef1f0180f8a4bb39c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1_1_model_cyl_1a33ddabc3a850b26ef1f0180f8a4bb39c" kindref="member">ID</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_model_cyl_1a8ebbf39ceec61afa0b35ca0b97bed332" kindref="member">id</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_emp_cyl2d_1_1_mapping" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl2d_1_1_mapping" kindref="compound">Mapping</ref></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="54" refid="class_emp_cyl2d_1_1_mapping_1a2597e3e8afa5aeeb4b0ebee4268e4945" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1a2597e3e8afa5aeeb4b0ebee4268e4945" kindref="member">cmap</ref>;</highlight></codeline>
-<codeline lineno="55" refid="class_emp_cyl2d_1_1_mapping_1a9f414d9679869558d3a78f1d44c19d20" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1a9f414d9679869558d3a78f1d44c19d20" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="60" refid="class_emp_cyl2d_1_1_mapping_1aac468b17199576b0c5f5eac575385257" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1aac468b17199576b0c5f5eac575385257" kindref="member">Mapping</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63" refid="class_emp_cyl2d_1_1_mapping_1ad9f5d2a3de2c851b773fd32361611db2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1ad9f5d2a3de2c851b773fd32361611db2" kindref="member">Mapping</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1a9f414d9679869558d3a78f1d44c19d20" kindref="member">scale</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1a2597e3e8afa5aeeb4b0ebee4268e4945" kindref="member">cmap</ref>)<sp/>:<sp/><ref refid="class_emp_cyl2d_1_1_mapping_1a9f414d9679869558d3a78f1d44c19d20" kindref="member">scale</ref>(<ref refid="class_emp_cyl2d_1_1_mapping_1a9f414d9679869558d3a78f1d44c19d20" kindref="member">scale</ref>),<sp/><ref refid="class_emp_cyl2d_1_1_mapping_1a2597e3e8afa5aeeb4b0ebee4268e4945" kindref="member">cmap</ref>(<ref refid="class_emp_cyl2d_1_1_mapping_1a2597e3e8afa5aeeb4b0ebee4268e4945" kindref="member">cmap</ref>)<sp/>{}</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_emp_cyl2d_1_1_mapping_1ab4a35a4ba916b538bffbf8aaa7abb27f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1ab4a35a4ba916b538bffbf8aaa7abb27f" kindref="member">r_to_xi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_emp_cyl2d_1_1_mapping_1a10ade36ddb79b97616bc077766b14697" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1a10ade36ddb79b97616bc077766b14697" kindref="member">xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xi);</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_emp_cyl2d_1_1_mapping_1af91fd35ce4a5c4b043f4cb586540812c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mapping_1af91fd35ce4a5c4b043f4cb586540812c" kindref="member">d_xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xi);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76" refid="class_emp_cyl2d_1_1_expon_cyl" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl2d_1_1_expon_cyl" kindref="compound">ExponCyl</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_model_cyl" kindref="compound">ModelCyl</ref></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="81" refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" kindref="member">acyl</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1ab68da270494235b608e2e3495fff3374" kindref="member">sigma0</ref>;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Assign<sp/>values<sp/>from<sp/>YAML</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85" refid="class_emp_cyl2d_1_1_expon_cyl_1ab7e68f45c42103e046e0b22fc6ab4898" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1ab7e68f45c42103e046e0b22fc6ab4898" kindref="member">parse</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>conf)</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(conf[</highlight><highlight class="stringliteral">&quot;acyl&quot;</highlight><highlight class="normal">])<sp/></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" kindref="member">acyl</ref><sp/>=<sp/>conf[</highlight><highlight class="stringliteral">&quot;acyl&quot;</highlight><highlight class="normal">].as&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;();</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" kindref="member">acyl</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(YAML::Exception<sp/>&amp;<sp/>error)<sp/>{</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Error<sp/>parsing<sp/>parameters<sp/>in<sp/>EmpCyl2d::ExponCyl:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>error.what()<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Config<sp/>node&quot;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>conf<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;EmpCyl2d::ExponCyl:<sp/>error<sp/>parsing<sp/>YAML<sp/>config&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_emp_cyl2d_1_1_expon_cyl_1a2958a2c6c10ab3cacde8e1c09df3f1b9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1a2958a2c6c10ab3cacde8e1c09df3f1b9" kindref="member">ExponCyl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>par)</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="global_8_h_1a735b1ce7a340373ac87191026132d105" kindref="member">parse</ref>(par);</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1ab68da270494235b608e2e3495fff3374" kindref="member">sigma0</ref><sp/>=<sp/>0.5/(M_PI*<ref refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" kindref="member">acyl</ref>*<ref refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" kindref="member">acyl</ref>);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal"><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;expon&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="115" refid="class_emp_cyl2d_1_1_expon_cyl_1a1f4f1365fea9b1bdd97ad232c878e392" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1a1f4f1365fea9b1bdd97ad232c878e392" kindref="member">pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y<sp/>=<sp/>0.5<sp/>*<sp/>r<sp/>/<sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" kindref="member">acyl</ref>;</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-M_PI*<ref refid="class_emp_cyl2d_1_1_expon_cyl_1ab68da270494235b608e2e3495fff3374" kindref="member">sigma0</ref>*r<sp/>*</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(EXPmath::cyl_bessel_i(0,<sp/>y)*EXPmath::cyl_bessel_k(1,<sp/>y)<sp/>-</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>EXPmath::cyl_bessel_i(1,<sp/>y)*EXPmath::cyl_bessel_k(0,<sp/>y));</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122" refid="class_emp_cyl2d_1_1_expon_cyl_1a9201ef90daeca2fb0dcdec94bdc8a694" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1a9201ef90daeca2fb0dcdec94bdc8a694" kindref="member">dpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y<sp/>=<sp/>0.5<sp/>*<sp/>r<sp/>/<sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" kindref="member">acyl</ref>;</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*M_PI*<ref refid="class_emp_cyl2d_1_1_expon_cyl_1ab68da270494235b608e2e3495fff3374" kindref="member">sigma0</ref>*y*</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(EXPmath::cyl_bessel_i(0,<sp/>y)*EXPmath::cyl_bessel_k(0,<sp/>y)<sp/>-</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>EXPmath::cyl_bessel_i(1,<sp/>y)*EXPmath::cyl_bessel_k(1,<sp/>y));</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="129" refid="class_emp_cyl2d_1_1_expon_cyl_1a23975a947174e6d6f15324ddd8049e72" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1a23975a947174e6d6f15324ddd8049e72" kindref="member">dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_expon_cyl_1ab68da270494235b608e2e3495fff3374" kindref="member">sigma0</ref>*exp(-r/<ref refid="class_emp_cyl2d_1_1_expon_cyl_1aa1a7f8bbd6fd6304cd1ecf5f09b41ef3" kindref="member">acyl</ref>);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135" refid="class_emp_cyl2d_1_1_kuzmin_cyl" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl" kindref="compound">KuzminCyl</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_model_cyl" kindref="compound">ModelCyl</ref></highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139" refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref>;</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Assign<sp/>values<sp/>from<sp/>YAML</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="143" refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a683b26fd21592b52bdf9cb9c5a509d4b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a683b26fd21592b52bdf9cb9c5a509d4b" kindref="member">parse</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>conf)</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(conf[</highlight><highlight class="stringliteral">&quot;acyl&quot;</highlight><highlight class="normal">])<sp/></highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref><sp/>=<sp/>conf[</highlight><highlight class="stringliteral">&quot;acyl&quot;</highlight><highlight class="normal">].as&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;();</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(YAML::Exception<sp/>&amp;<sp/>error)<sp/>{</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Error<sp/>parsing<sp/>parameters<sp/>in<sp/>EmpCyl2d::KuzminCyl:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>error.what()<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Config<sp/>node&quot;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>conf<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;EmpCyl2d::KuzminCyl:<sp/>error<sp/>parsing<sp/>YAML<sp/>config&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="166" refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a254f4c6869a61aca9ee538cc7529ac59" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a254f4c6869a61aca9ee538cc7529ac59" kindref="member">KuzminCyl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>par)</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="global_8_h_1a735b1ce7a340373ac87191026132d105" kindref="member">parse</ref>(par);</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal"><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;kuzmin&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"></highlight></codeline>
-<codeline lineno="172" refid="class_emp_cyl2d_1_1_kuzmin_cyl_1ab1c2dabbf6b68ed0c19c26d4096a6491" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1ab1c2dabbf6b68ed0c19c26d4096a6491" kindref="member">pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>a2<sp/>=<sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref><sp/>*<sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref>;</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-1.0/sqrt(R*R<sp/>+<sp/>a2);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="177" refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a44b53dd9c6922cb0fb6a0a28a0690b34" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a44b53dd9c6922cb0fb6a0a28a0690b34" kindref="member">dpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>a2<sp/>=<sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref><sp/>*<sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref>;</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>R/pow(R*R<sp/>+<sp/>a2,<sp/>1.5);</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="182" refid="class_emp_cyl2d_1_1_kuzmin_cyl_1ab78966b1e02a599fd5cb703da8a78bb1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1ab78966b1e02a599fd5cb703da8a78bb1" kindref="member">dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>a2<sp/>=<sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref><sp/>*<sp/><ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref>;</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>4.0*M_PI*<ref refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" kindref="member">acyl</ref>/pow(R*R<sp/>+<sp/>a2,<sp/>1.5)/(2.0*M_PI);</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>^</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>|</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>This<sp/>4pi<sp/>from<sp/>Poisson&apos;s<sp/>eqn</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193" refid="class_emp_cyl2d_1_1_mestel_cyl" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl2d_1_1_mestel_cyl" kindref="compound">MestelCyl</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_model_cyl" kindref="compound">ModelCyl</ref></highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197" refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" kindref="member">vrot</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" kindref="member">rot</ref>;</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Assign<sp/>values<sp/>from<sp/>YAML</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="201" refid="class_emp_cyl2d_1_1_mestel_cyl_1a3cf3ad11fe49cd8bd3d9cff714241b0b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a3cf3ad11fe49cd8bd3d9cff714241b0b" kindref="member">parse</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>conf)</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(conf[</highlight><highlight class="stringliteral">&quot;vrot&quot;</highlight><highlight class="normal">])<sp/></highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" kindref="member">vrot</ref><sp/>=<sp/>conf[</highlight><highlight class="stringliteral">&quot;vrot&quot;</highlight><highlight class="normal">].as&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;();</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" kindref="member">vrot</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(YAML::Exception<sp/>&amp;<sp/>error)<sp/>{</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Error<sp/>parsing<sp/>parameters<sp/>in<sp/>EmpCyl2d::MestelCyl:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>error.what()<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Config<sp/>node&quot;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>conf<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;EmpCyl2d::MestelCyl:<sp/>error<sp/>parsing<sp/>YAML<sp/>config&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="224" refid="class_emp_cyl2d_1_1_mestel_cyl_1a7ab83a137e406503bcb59a1fe0cee7a0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a7ab83a137e406503bcb59a1fe0cee7a0" kindref="member">MestelCyl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>par)</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="global_8_h_1a735b1ce7a340373ac87191026132d105" kindref="member">parse</ref>(par);</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" kindref="member">rot</ref><sp/>=<sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" kindref="member">vrot</ref>*<ref refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" kindref="member">vrot</ref>;</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal"><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;mestel&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="231" refid="class_emp_cyl2d_1_1_mestel_cyl_1a26d0c0b25f4e57347e9480e5a37003b9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a26d0c0b25f4e57347e9480e5a37003b9" kindref="member">pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" kindref="member">rot</ref>*log(R);</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;MestelCyl::pot:<sp/>R&lt;=0&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="236" refid="class_emp_cyl2d_1_1_mestel_cyl_1a9a86c14800160298c7fefb80241e5128" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a9a86c14800160298c7fefb80241e5128" kindref="member">dpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" kindref="member">rot</ref>/R;</highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;MestelCyl::dpot:<sp/>R&lt;=0&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241" refid="class_emp_cyl2d_1_1_mestel_cyl_1a5bd3548fb3a191a1c4a0831166416820" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a5bd3548fb3a191a1c4a0831166416820" kindref="member">dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" kindref="member">rot</ref>/(2.0*M_PI*R);</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;MestelCyl::dens:<sp/>R&lt;=0&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="247"><highlight class="normal"></highlight></codeline>
-<codeline lineno="248" refid="class_emp_cyl2d_1_1_zang_cyl" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl2d_1_1_zang_cyl" kindref="compound">ZangCyl</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl" kindref="compound">MestelCyl</ref></highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="253" refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" kindref="member">mu</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" kindref="member">nu</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1aae4845cfcf7366f1601cfb90c9e59fc6" kindref="member">ri</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af5cd8eb236aea13e4ed3810f200a8045" kindref="member">ro</ref>;</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"></highlight></codeline>
-<codeline lineno="256" refid="class_emp_cyl2d_1_1_zang_cyl_1ac5740ba03f4d293f6dd2fba0851ad484" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1ac5740ba03f4d293f6dd2fba0851ad484" kindref="member">asoft</ref><sp/>=<sp/>1.0e-8;</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"></highlight></codeline>
-<codeline lineno="259" refid="class_emp_cyl2d_1_1_zang_cyl_1aea1830c1aed130c7f05699519ce52e25" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1aea1830c1aed130c7f05699519ce52e25" kindref="member">Inner</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"></highlight></codeline>
-<codeline lineno="262" refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" kindref="member">Tifac</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" kindref="member">Tofac</ref>;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"></highlight></codeline>
-<codeline lineno="265" refid="class_emp_cyl2d_1_1_zang_cyl_1a9ec6fce0cf7ca99e6eb1d42c4b7f7609" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a9ec6fce0cf7ca99e6eb1d42c4b7f7609" kindref="member">Tinner</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Jp)</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fac<sp/>=<sp/>pow(Jp,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" kindref="member">nu</ref>);</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>fac/(<ref refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" kindref="member">Tifac</ref><sp/>+<sp/>fac);</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="270"><highlight class="normal"></highlight></codeline>
-<codeline lineno="272" refid="class_emp_cyl2d_1_1_zang_cyl_1a5e109a82cee9c50e79b4cd91e751cec4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a5e109a82cee9c50e79b4cd91e751cec4" kindref="member">Touter</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Jp)</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/(1.0<sp/>+<sp/>pow(Jp/<ref refid="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" kindref="member">Tofac</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" kindref="member">mu</ref>));</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="278" refid="class_emp_cyl2d_1_1_zang_cyl_1a49f87e15df18e406da330041c99c3e96" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a49f87e15df18e406da330041c99c3e96" kindref="member">dTinner</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Jp)</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fac<sp/><sp/>=<sp/>pow(Jp,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" kindref="member">nu</ref>);</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fac2<sp/>=<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" kindref="member">Tifac</ref><sp/>+<sp/>fac;</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" kindref="member">nu</ref>*fac/Jp/(fac2*fac2);</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="286" refid="class_emp_cyl2d_1_1_zang_cyl_1a58311bc5eb1402a9506d36d80ce9155c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a58311bc5eb1402a9506d36d80ce9155c" kindref="member">dTouter</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Jp)</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fac<sp/>=<sp/>pow(Jp/<ref refid="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" kindref="member">Tofac</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" kindref="member">mu</ref>);</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fac2<sp/>=<sp/>1.0<sp/>+<sp/>fac;</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" kindref="member">mu</ref>*fac/Jp/(fac2*fac2);</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="296" refid="class_emp_cyl2d_1_1_zang_cyl_1a4a7f9b1cf01e346033aa9f6da3cbbe15" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a4a7f9b1cf01e346033aa9f6da3cbbe15" kindref="member">parse</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>conf)</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(conf[</highlight><highlight class="stringliteral">&quot;Ninner&quot;</highlight><highlight class="normal">])<sp/></highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" kindref="member">nu</ref><sp/>=<sp/>conf[</highlight><highlight class="stringliteral">&quot;Ninner&quot;</highlight><highlight class="normal">].as&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;();</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" kindref="member">nu</ref><sp/>=<sp/>2.0;</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"></highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(conf[</highlight><highlight class="stringliteral">&quot;Mouter&quot;</highlight><highlight class="normal">])<sp/></highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" kindref="member">mu</ref><sp/>=<sp/>conf[</highlight><highlight class="stringliteral">&quot;Mouter&quot;</highlight><highlight class="normal">].as&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;();</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" kindref="member">mu</ref><sp/>=<sp/>2.0;</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(conf[</highlight><highlight class="stringliteral">&quot;Ri&quot;</highlight><highlight class="normal">])<sp/></highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1aae4845cfcf7366f1601cfb90c9e59fc6" kindref="member">ri</ref><sp/>=<sp/>conf[</highlight><highlight class="stringliteral">&quot;Ri&quot;</highlight><highlight class="normal">].as&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;();</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1aae4845cfcf7366f1601cfb90c9e59fc6" kindref="member">ri</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(conf[</highlight><highlight class="stringliteral">&quot;Ro&quot;</highlight><highlight class="normal">])<sp/></highlight></codeline>
-<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af5cd8eb236aea13e4ed3810f200a8045" kindref="member">ro</ref><sp/>=<sp/>conf[</highlight><highlight class="stringliteral">&quot;Ro&quot;</highlight><highlight class="normal">].as&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;();</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af5cd8eb236aea13e4ed3810f200a8045" kindref="member">ro</ref><sp/>=<sp/>10.0;</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(YAML::Exception<sp/>&amp;<sp/>error)<sp/>{</highlight></codeline>
-<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Error<sp/>parsing<sp/>parameters<sp/>in<sp/>EmpCyl2d::ZangCyl:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>error.what()<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Config<sp/>node&quot;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>conf<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::string(60,<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;EmpCyl2d::ZangCyl:<sp/>error<sp/>parsing<sp/>YAML<sp/>config&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="331"><highlight class="normal"></highlight></codeline>
-<codeline lineno="332"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="333"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="335" refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" kindref="member">ZangCyl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>par)<sp/>:<sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl" kindref="compound">MestelCyl</ref>(par)</highlight></codeline>
-<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parse<sp/>the<sp/>YAML</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="global_8_h_1a735b1ce7a340373ac87191026132d105" kindref="member">parse</ref>(par);</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Assign<sp/>the<sp/>id</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal"><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;zang&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Cache<sp/>taper<sp/>factors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" kindref="member">Tifac</ref><sp/>=<sp/>pow(<ref refid="class_emp_cyl2d_1_1_zang_cyl_1aae4845cfcf7366f1601cfb90c9e59fc6" kindref="member">ri</ref>*<ref refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" kindref="member">vrot</ref>,<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" kindref="member">nu</ref>);</highlight></codeline>
-<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" kindref="member">Tofac</ref><sp/>=<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1af5cd8eb236aea13e4ed3810f200a8045" kindref="member">ro</ref>*<ref refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" kindref="member">vrot</ref>;</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" kindref="member">nu</ref>&lt;0.05)<sp/>{</highlight></codeline>
-<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Exponent<sp/>is<sp/>now<sp/>for<sp/>mapping<sp/>only</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1aea1830c1aed130c7f05699519ce52e25" kindref="member">Inner</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="354" refid="class_emp_cyl2d_1_1_zang_cyl_1ac8aade9ab8ab18ab48487af22d47ea67" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1ac8aade9ab8ab18ab48487af22d47ea67" kindref="member">dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)</highlight></codeline>
-<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/><ref refid="class_emp_cyl2d_1_1_mestel_cyl_1a5bd3548fb3a191a1c4a0831166416820" kindref="member">MestelCyl::dens</ref>(R)<sp/>*<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a5e109a82cee9c50e79b4cd91e751cec4" kindref="member">Touter</ref>(R);</highlight></codeline>
-<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl2d_1_1_zang_cyl_1aea1830c1aed130c7f05699519ce52e25" kindref="member">Inner</ref>)<sp/>ret<sp/>*=<sp/><ref refid="class_emp_cyl2d_1_1_zang_cyl_1a9ec6fce0cf7ca99e6eb1d42c4b7f7609" kindref="member">Tinner</ref>(R);</highlight></codeline>
-<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="361"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="362"><highlight class="normal"></highlight></codeline>
-<codeline lineno="363"><highlight class="normal"></highlight></codeline>
-<codeline lineno="364"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="365"><highlight class="normal"></highlight></codeline>
-<codeline lineno="367" refid="class_emp_cyl2d_1a01bb476da94c7d55ab449a78f23382f6" refkind="member"><highlight class="normal"><sp/><sp/>YAML::Node<sp/><ref refid="class_emp_cyl2d_1a01bb476da94c7d55ab449a78f23382f6" kindref="member">Params</ref>;</highlight></codeline>
-<codeline lineno="368"><highlight class="normal"></highlight></codeline>
-<codeline lineno="369" refid="class_emp_cyl2d_1a90732371052f084e699ffc4d64b2be04" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a7827001d015ae29f5aa92848ead53f5f" kindref="member">rmin</ref>,<sp/><ref refid="class_emp_cyl2d_1a90732371052f084e699ffc4d64b2be04" kindref="member">rmax</ref>,<sp/><ref refid="class_emp_cyl2d_1a10793f785f2a8b413ff7e69845e99ac7" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="370" refid="class_emp_cyl2d_1a45ae32ac42d9f74d2a0b27213fbaf52b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a4425ff692c823bf4327f96f4433f0269" kindref="member">xmin</ref>,<sp/><ref refid="class_emp_cyl2d_1a22ffab7ffb4aeae38564e87d82874470" kindref="member">xmax</ref>,<sp/><ref refid="class_emp_cyl2d_1a45ae32ac42d9f74d2a0b27213fbaf52b" kindref="member">dxi</ref>;</highlight></codeline>
-<codeline lineno="371" refid="class_emp_cyl2d_1a395b4ae2370f18b042e5fa8f6459fdd2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a2cd4e321747f715a884068126067e94c" kindref="member">mmax</ref>,<sp/><ref refid="class_emp_cyl2d_1ac1bc05ce378bca56ceb77e7fbbee68de" kindref="member">nmaxfid</ref>,<sp/><ref refid="class_emp_cyl2d_1af573bb26ae59ac054b667c76041e07b4" kindref="member">numr</ref>,<sp/><ref refid="class_emp_cyl2d_1a395b4ae2370f18b042e5fa8f6459fdd2" kindref="member">knots</ref>,<sp/><ref refid="class_emp_cyl2d_1a4420b46de42622236236210640bd5156" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="372" refid="class_emp_cyl2d_1a722d7398a7cd2d4ff9ed78663c6ec9c9" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1aff08124c9b5ae900ef2873a36c5e8e1f" kindref="member">model</ref>,<sp/><ref refid="class_emp_cyl2d_1a722d7398a7cd2d4ff9ed78663c6ec9c9" kindref="member">biorth</ref>;</highlight></codeline>
-<codeline lineno="373" refid="class_emp_cyl2d_1a799dfcc0ca132249ec29aebccb411bc4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1aeb2fbcb6010dc78fe3e3f186cde372a9" kindref="member">cmap</ref>,<sp/><ref refid="class_emp_cyl2d_1a9e0a423a2001bbe311d61fd84687551a" kindref="member">logr</ref>,<sp/><ref refid="class_emp_cyl2d_1a799dfcc0ca132249ec29aebccb411bc4" kindref="member">basis_test</ref>,<sp/><ref refid="class_emp_cyl2d_1a894d179901c70002f3ea3287c0007f08" kindref="member">configured</ref>;</highlight></codeline>
-<codeline lineno="374"><highlight class="normal"></highlight></codeline>
-<codeline lineno="375" refid="class_emp_cyl2d_1afe18203b85a4253cf06b2418328ca0dc" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_emp_cyl2d_1a0f5bfc9472480f146893e2ded214006c" kindref="member">potl_array</ref>,<sp/><ref refid="class_emp_cyl2d_1afe18203b85a4253cf06b2418328ca0dc" kindref="member">dens_array</ref>,<sp/><ref refid="class_emp_cyl2d_1ab562ff93bc6447bc31d905edf3c9dde0" kindref="member">dpot_array</ref>;</highlight></codeline>
-<codeline lineno="376" refid="class_emp_cyl2d_1aba1d590dc62ef3feb07e63ff2a5a2c1d" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_emp_cyl2d_1aba1d590dc62ef3feb07e63ff2a5a2c1d" kindref="member">rot_matrix</ref>;</highlight></codeline>
-<codeline lineno="377" refid="class_emp_cyl2d_1a5c0e2f279eeaba97716625052e537a15" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_emp_cyl2d_1a5c0e2f279eeaba97716625052e537a15" kindref="member">xgrid</ref>;</highlight></codeline>
-<codeline lineno="378"><highlight class="normal"></highlight></codeline>
-<codeline lineno="380" refid="class_emp_cyl2d_1_1_basis2d" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl2d_1_1_basis2d" kindref="compound">Basis2d</ref></highlight></codeline>
-<codeline lineno="381"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"></highlight></codeline>
-<codeline lineno="385" refid="class_emp_cyl2d_1_1_basis2d_1a04a6d8d492a470b81893a6e9310b40c3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_basis2d_1a04a6d8d492a470b81893a6e9310b40c3" kindref="member">debug</ref>;</highlight></codeline>
-<codeline lineno="386"><highlight class="normal"></highlight></codeline>
-<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;Basis2d&gt;</highlight></codeline>
-<codeline lineno="389" refid="class_emp_cyl2d_1_1_basis2d_1aaa653892b1658706d8f737894581bdda" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl2d_1_1_basis2d_1aaa653892b1658706d8f737894581bdda" kindref="member">createBasis</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a2cd4e321747f715a884068126067e94c" kindref="member">mmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1ac1bc05ce378bca56ceb77e7fbbee68de" kindref="member">nmaxfid</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a90732371052f084e699ffc4d64b2be04" kindref="member">rmax</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>type);</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"></highlight></codeline>
-<codeline lineno="392"><highlight class="normal"></highlight></codeline>
-<codeline lineno="393" refid="class_emp_cyl2d_1_1_basis2d_1a1482bda5f0afb012c3a212180f90c595" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_basis2d_1a1482bda5f0afb012c3a212180f90c595" kindref="member">potl</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="394" refid="class_emp_cyl2d_1_1_basis2d_1a9f0f5f2ec2a6a0a110c8ab220afd1625" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_basis2d_1a9f0f5f2ec2a6a0a110c8ab220afd1625" kindref="member">dens</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="395" refid="class_emp_cyl2d_1_1_basis2d_1a376b74d34c32bffea73b4f0b8ad8126e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_basis2d_1a376b74d34c32bffea73b4f0b8ad8126e" kindref="member">dpot</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="396" refid="class_emp_cyl2d_1_1_basis2d_1a3af91254a074558b722b692799b388c5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1_1_basis2d_1a3af91254a074558b722b692799b388c5" kindref="member">norm</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="399"><highlight class="normal"></highlight></codeline>
-<codeline lineno="400"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">CluttonBrock;</highlight></codeline>
-<codeline lineno="401"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_bessel" kindref="compound">Bessel</ref>;</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"></highlight></codeline>
-<codeline lineno="403" refid="class_emp_cyl2d_1aa4435e8994dcdaf805e416ae12038557" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;ModelCyl&gt;<sp/><ref refid="class_emp_cyl2d_1aa4435e8994dcdaf805e416ae12038557" kindref="member">disk</ref>;</highlight></codeline>
-<codeline lineno="404" refid="class_emp_cyl2d_1ab0e5c03e30a56cdba86aa199b1af8cb7" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;Basis2d&gt;<sp/><sp/><ref refid="class_emp_cyl2d_1ab0e5c03e30a56cdba86aa199b1af8cb7" kindref="member">basis</ref>;</highlight></codeline>
-<codeline lineno="405"><highlight class="normal"></highlight></codeline>
-<codeline lineno="406" refid="class_emp_cyl2d_1add20591d92d3e8deb4c4693510fb4668" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;ModelCyl&gt;<sp/><ref refid="class_emp_cyl2d_1add20591d92d3e8deb4c4693510fb4668" kindref="member">createModel</ref>();</highlight></codeline>
-<codeline lineno="407"><highlight class="normal"></highlight></codeline>
-<codeline lineno="409" refid="class_emp_cyl2d_1a32de18cb6d3f0366104a564c62d02ed4" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl2d_1_1_mapping" kindref="compound">Mapping</ref><sp/><ref refid="class_emp_cyl2d_1a32de18cb6d3f0366104a564c62d02ed4" kindref="member">map</ref>;</highlight></codeline>
-<codeline lineno="410"><highlight class="normal"></highlight></codeline>
-<codeline lineno="411" refid="class_emp_cyl2d_1aefdd4dab54583e2f99e121b088de2e02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1aefdd4dab54583e2f99e121b088de2e02" kindref="member">create_tables</ref>();</highlight></codeline>
-<codeline lineno="412" refid="class_emp_cyl2d_1ad6006930a078d5b2d262f5de7e80aa7e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1ad6006930a078d5b2d262f5de7e80aa7e" kindref="member">ReadH5Cache</ref>();</highlight></codeline>
-<codeline lineno="413" refid="class_emp_cyl2d_1a514e73e00f42cb61189cae8857069274" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a514e73e00f42cb61189cae8857069274" kindref="member">WriteH5Cache</ref>();</highlight></codeline>
-<codeline lineno="414"><highlight class="normal"></highlight></codeline>
-<codeline lineno="416" refid="class_emp_cyl2d_1a8c9c878a19ea4aab1ecb3357efdc5d0e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1a8c9c878a19ea4aab1ecb3357efdc5d0e" kindref="member">Version</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;1.0&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="417"><highlight class="normal"></highlight></codeline>
-<codeline lineno="419" refid="class_emp_cyl2d_1a88cfb80d74560dcf00c0f861c6eb0e0b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a88cfb80d74560dcf00c0f861c6eb0e0b" kindref="member">hmagic</ref><sp/>=<sp/>0xc0a57a1;</highlight></codeline>
-<codeline lineno="420"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="422"><highlight class="normal"></highlight></codeline>
-<codeline lineno="423" refid="class_emp_cyl2d_1a233d8da77204244b57df3d0338e09281" refkind="member"><highlight class="normal"><sp/><sp/>std::tuple&lt;int,<sp/>int,<sp/>double,<sp/>double&gt;<sp/><ref refid="class_emp_cyl2d_1a233d8da77204244b57df3d0338e09281" kindref="member">linear_interp</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="424" refid="class_emp_cyl2d_1ac2d64888010aae79a0b505e46551bbe4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1ac2d64888010aae79a0b505e46551bbe4" kindref="member">checkMN</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>M,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>N,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>member);</highlight></codeline>
-<codeline lineno="426"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="428" refid="class_emp_cyl2d_1a7eabba734e4255f726d27b18e57f6fbd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1a7eabba734e4255f726d27b18e57f6fbd" kindref="member">default_cache_name</ref>;</highlight></codeline>
-<codeline lineno="429"><highlight class="normal"></highlight></codeline>
-<codeline lineno="431" refid="class_emp_cyl2d_1a1e0b8bab39d8578da97fb09e052bf996" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1a1e0b8bab39d8578da97fb09e052bf996" kindref="member">cache_name_2d</ref>;</highlight></codeline>
-<codeline lineno="432"><highlight class="normal"></highlight></codeline>
-<codeline lineno="433"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="434"><highlight class="normal"></highlight></codeline>
-<codeline lineno="436" refid="class_emp_cyl2d_1af9581cde255fa3fc6d9168b2d2381b22" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl2d_1af9581cde255fa3fc6d9168b2d2381b22" kindref="member">EmpCyl2d</ref>()<sp/>:<sp/><ref refid="class_emp_cyl2d_1a894d179901c70002f3ea3287c0007f08" kindref="member">configured</ref>(false)<sp/>{}</highlight></codeline>
-<codeline lineno="437"><highlight class="normal"></highlight></codeline>
-<codeline lineno="439" refid="class_emp_cyl2d_1ab642280e8a6d18a4d71c51700425c8df" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl2d_1ab642280e8a6d18a4d71c51700425c8df" kindref="member">EmpCyl2d</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a2cd4e321747f715a884068126067e94c" kindref="member">mmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1ac1bc05ce378bca56ceb77e7fbbee68de" kindref="member">nmaxfid</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a4420b46de42622236236210640bd5156" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a395b4ae2370f18b042e5fa8f6459fdd2" kindref="member">knots</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1af573bb26ae59ac054b667c76041e07b4" kindref="member">numr</ref>,</highlight></codeline>
-<codeline lineno="440"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a7827001d015ae29f5aa92848ead53f5f" kindref="member">rmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a90732371052f084e699ffc4d64b2be04" kindref="member">rmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a10793f785f2a8b413ff7e69845e99ac7" kindref="member">scale</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1aeb2fbcb6010dc78fe3e3f186cde372a9" kindref="member">cmap</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a9e0a423a2001bbe311d61fd84687551a" kindref="member">logr</ref>,</highlight></codeline>
-<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>P,</highlight></codeline>
-<codeline lineno="442"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1a722d7398a7cd2d4ff9ed78663c6ec9c9" kindref="member">biorth</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>cache=</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="443"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="445" refid="class_emp_cyl2d_1a48ac0eda97ae5025f35eceeafe2335a5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl2d_1a48ac0eda97ae5025f35eceeafe2335a5" kindref="member">EmpCyl2d</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a2cd4e321747f715a884068126067e94c" kindref="member">mmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1ac1bc05ce378bca56ceb77e7fbbee68de" kindref="member">nmaxfid</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a4420b46de42622236236210640bd5156" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a395b4ae2370f18b042e5fa8f6459fdd2" kindref="member">knots</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1af573bb26ae59ac054b667c76041e07b4" kindref="member">numr</ref>,</highlight></codeline>
-<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a7827001d015ae29f5aa92848ead53f5f" kindref="member">rmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a90732371052f084e699ffc4d64b2be04" kindref="member">rmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a10793f785f2a8b413ff7e69845e99ac7" kindref="member">scale</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1aeb2fbcb6010dc78fe3e3f186cde372a9" kindref="member">cmap</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a9e0a423a2001bbe311d61fd84687551a" kindref="member">logr</ref>,</highlight></codeline>
-<codeline lineno="447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;ModelCyl&gt;<sp/><ref refid="class_emp_cyl2d_1aa4435e8994dcdaf805e416ae12038557" kindref="member">disk</ref>,</highlight></codeline>
-<codeline lineno="448"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1a722d7398a7cd2d4ff9ed78663c6ec9c9" kindref="member">biorth</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>cache=</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="449"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="451" refid="class_emp_cyl2d_1a76c54f44a8d14c3fe17562494a2dcc40" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a76c54f44a8d14c3fe17562494a2dcc40" kindref="member">basisTest</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>which)<sp/>{<sp/><ref refid="class_emp_cyl2d_1a799dfcc0ca132249ec29aebccb411bc4" kindref="member">basis_test</ref><sp/>=<sp/>which;<sp/>}</highlight></codeline>
-<codeline lineno="452"><highlight class="normal"></highlight></codeline>
-<codeline lineno="454" refid="class_emp_cyl2d_1a7f828a74ed264276c3214679a77763b4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a7f828a74ed264276c3214679a77763b4" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="455"><highlight class="normal"></highlight></codeline>
-<codeline lineno="457" refid="class_emp_cyl2d_1a917dfe4aece2571715a3dd216943203e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a917dfe4aece2571715a3dd216943203e" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="458"><highlight class="normal"></highlight></codeline>
-<codeline lineno="460" refid="class_emp_cyl2d_1a8ebcf2237094e2912d4f21e486eac9e1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a8ebcf2237094e2912d4f21e486eac9e1" kindref="member">get_dpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="461"><highlight class="normal"></highlight></codeline>
-<codeline lineno="463"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="465" refid="class_emp_cyl2d_1a49efdfc87d6db745996f0e5082a93914" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a49efdfc87d6db745996f0e5082a93914" kindref="member">get_dens</ref><sp/>(Eigen::MatrixXd&amp;<sp/>mat,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="466" refid="class_emp_cyl2d_1add9a31b0b9becabff604695cc688932c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1add9a31b0b9becabff604695cc688932c" kindref="member">get_force</ref>(Eigen::MatrixXd&amp;<sp/>mat,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
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-<codeline lineno="470" refid="class_emp_cyl2d_1a9d5a136698db5daa5472d7c596600dee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a9d5a136698db5daa5472d7c596600dee" kindref="member">writeBasis</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
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-<codeline lineno="474" refid="class_emp_cyl2d_1a0d16955d370bd0d662433c46a191f5b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a0d16955d370bd0d662433c46a191f5b6" kindref="member">writeTrans</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
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-<codeline lineno="478" refid="class_emp_cyl2d_1af3394365c2151065cc8b165288017a96" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1af3394365c2151065cc8b165288017a96" kindref="member">orthoCheck</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="479"><highlight class="normal"></highlight></codeline>
-<codeline lineno="481" refid="class_emp_cyl2d_1a43e01112e8e552742158f64337b1e2af" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_emp_cyl2d_1a43e01112e8e552742158f64337b1e2af" kindref="member">orthoCheck</ref>();</highlight></codeline>
-<codeline lineno="482"><highlight class="normal"></highlight></codeline>
-<codeline lineno="485" refid="class_emp_cyl2d_1aeae06b336f4325934f1d1956bd234d00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1aeae06b336f4325934f1d1956bd234d00" kindref="member">checkCoefs</ref>();</highlight></codeline>
-<codeline lineno="486"><highlight class="normal"></highlight></codeline>
-<codeline lineno="488" refid="class_emp_cyl2d_1a748053549fc20ebecf3b6417cfc5630d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a748053549fc20ebecf3b6417cfc5630d" kindref="member">getRmin</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a7827001d015ae29f5aa92848ead53f5f" kindref="member">rmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="489"><highlight class="normal"></highlight></codeline>
-<codeline lineno="491" refid="class_emp_cyl2d_1ac9ddd679d2071b64edcaf54d43b8b5bd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1ac9ddd679d2071b64edcaf54d43b8b5bd" kindref="member">getRmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a90732371052f084e699ffc4d64b2be04" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
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-<codeline lineno="494" refid="class_emp_cyl2d_1a09b9797b1650a7f37a714a14c242b937" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a09b9797b1650a7f37a714a14c242b937" kindref="member">operator()</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a894d179901c70002f3ea3287c0007f08" kindref="member">configured</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="495"><highlight class="normal"></highlight></codeline>
-<codeline lineno="497" refid="class_emp_cyl2d_1a44acdc5f9a2dddff075be3a63f0fa0f0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl2d_1_1_mapping" kindref="compound">Mapping</ref><sp/><ref refid="class_emp_cyl2d_1a44acdc5f9a2dddff075be3a63f0fa0f0" kindref="member">getMapping</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1a32de18cb6d3f0366104a564c62d02ed4" kindref="member">map</ref>;<sp/>}</highlight></codeline>
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-<codeline lineno="500" refid="class_emp_cyl2d_1ab6732d5c1869669061e583214a93bb2a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_emp_cyl2d_1ab6732d5c1869669061e583214a93bb2a" kindref="member">getModelName</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl2d_1aff08124c9b5ae900ef2873a36c5e8e1f" kindref="member">model</ref>;<sp/>}</highlight></codeline>
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-<codeline lineno="504"><highlight class="normal"></highlight></codeline>
-<codeline lineno="505"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="506"><highlight class="normal"></highlight></codeline>
-<codeline lineno="507"><highlight class="normal"></highlight></codeline>
-<codeline lineno="508"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_emp_cyl_s_l_8_h.xml b/doxyxml/_emp_cyl_s_l_8_h.xml
deleted file mode 100644
index 85d0dcc..0000000
--- a/doxyxml/_emp_cyl_s_l_8_h.xml
+++ /dev/null
@@ -1,1267 +0,0 @@
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-    <includes refid="_timer_8_h" local="no">Timer.H</includes>
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-    <includes refid="_s_l_grid_m_p2_8_h" local="no">SLGridMP2.H</includes>
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-    <includes refid="libvars_8_h" local="no">libvars.H</includes>
-    <includedby refid="_disk_models_8_h" local="no">/home/weinberg/Projects/EXP/include/DiskModels.H</includedby>
-    <includedby refid="_cyl_e_x_p_8_h" local="no">/home/weinberg/Projects/EXP/src/CylEXP.H</includedby>
-    <includedby refid="_cyl_disk_8_h" local="yes">/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H</includedby>
-    <includedby refid="_disk_eval_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H</includedby>
-    <includedby refid="_disk_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</includedby>
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-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="92"></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_emp_cyl_s_l_1af169df94ef9d7b66681fc2bfe6c97870" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1ae28c1cae7b3574cb457c8e1e00a094af" kindref="member">SLGridSphPtr</ref><sp/><ref refid="class_emp_cyl_s_l_1af169df94ef9d7b66681fc2bfe6c97870" kindref="member">ortho</ref>;</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="111"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="113" refid="class_emp_cyl_s_l_1a7e56db72abcf0d0eec07f15eb2376032" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/>&gt;<sp/><ref refid="class_emp_cyl_s_l_1a7e56db72abcf0d0eec07f15eb2376032" kindref="member">densC</ref>;</highlight></codeline>
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-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117" refid="class_emp_cyl_s_l_1a80294caadb34d5e85752bed0f85b2b42" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/>&gt;<sp/><ref refid="class_emp_cyl_s_l_1a80294caadb34d5e85752bed0f85b2b42" kindref="member">potS</ref>;</highlight></codeline>
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-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122" refid="class_emp_cyl_s_l_1ae9e179b3f0465c094b8f1006d34ec6af" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_emp_cyl_s_l_1ae9e179b3f0465c094b8f1006d34ec6af" kindref="member">table</ref>;</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124" refid="class_emp_cyl_s_l_1a46fe2e58f46713c5fc4b6c14d098c5c1" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_emp_cyl_s_l_1a46fe2e58f46713c5fc4b6c14d098c5c1" kindref="member">tpot</ref>;</highlight></codeline>
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-<codeline lineno="127" refid="class_emp_cyl_s_l_1a219f95b6d3df7abbe26153d2afd7132d" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_emp_cyl_s_l_1a219f95b6d3df7abbe26153d2afd7132d" kindref="member">tzforce</ref>;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="129" refid="class_emp_cyl_s_l_1aef3ae77896a94fd792bfda35b6b4bfe5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;Eigen::VectorXd&gt;&gt;<sp/><ref refid="class_emp_cyl_s_l_1aef3ae77896a94fd792bfda35b6b4bfe5" kindref="member">VectorD2</ref>;</highlight></codeline>
-<codeline lineno="130" refid="class_emp_cyl_s_l_1ab920a867dad05729d3b2aa3e6f13cb78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;VectorD2&gt;<sp/><ref refid="class_emp_cyl_s_l_1ab920a867dad05729d3b2aa3e6f13cb78" kindref="member">VectorD2ptr</ref>;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147" refid="struct_emp_cyl_s_l_1_1_mstep_array" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_emp_cyl_s_l_1_1_mstep_array" kindref="compound">MstepArray</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::vector&lt;VectorD2ptr&gt;</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="149" refid="struct_emp_cyl_s_l_1_1_mstep_array_1a537bfa96caf1c4c33cdd0dd27ccd47dc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1aef3ae77896a94fd792bfda35b6b4bfe5" kindref="member">VectorD2</ref><sp/>&amp;<sp/><ref refid="struct_emp_cyl_s_l_1_1_mstep_array_1a537bfa96caf1c4c33cdd0dd27ccd47dc" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*(*</highlight><highlight class="keyword">this</highlight><highlight class="normal">)[<ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>]);<sp/>}</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight></codeline>
-<codeline lineno="152" refid="class_emp_cyl_s_l_1ab415413271f771c89d825134bb946ee3" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_emp_cyl_s_l_1_1_mstep_array" kindref="compound">MstepArray</ref><sp/><ref refid="class_emp_cyl_s_l_1ab415413271f771c89d825134bb946ee3" kindref="member">cosL</ref>,<sp/><ref refid="class_emp_cyl_s_l_1aa21c6a9576dc5d76cba066a238b94409" kindref="member">cosN</ref>,<sp/><ref refid="class_emp_cyl_s_l_1aa39cf62fe73b366dea72632ced5fbea6" kindref="member">sinL</ref>,<sp/><ref refid="class_emp_cyl_s_l_1a82b0d7db830198f6a65ec6548bebc789" kindref="member">sinN</ref>;</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="156"><highlight class="normal"></highlight></codeline>
-<codeline lineno="157" refid="class_emp_cyl_s_l_1aa73f0cb40abc6958380212b49e620302" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_emp_cyl_s_l_1aa73f0cb40abc6958380212b49e620302" kindref="member">accum_cos</ref>;</highlight></codeline>
-<codeline lineno="158" refid="class_emp_cyl_s_l_1a7a9a5f30a82f1540107d6e5c0dcb3ccd" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_emp_cyl_s_l_1a7a9a5f30a82f1540107d6e5c0dcb3ccd" kindref="member">accum_sin</ref>;</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"></highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="177" refid="struct_emp_cyl_s_l_1_1_coef_vector" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_emp_cyl_s_l_1_1_coef_vector" kindref="compound">CoefVector</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;VectorM&gt;&gt;</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="179" refid="struct_emp_cyl_s_l_1_1_coef_vector_1a8663d9edb1564b67259f85cdfb6c2153" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>&amp;<sp/><ref refid="struct_emp_cyl_s_l_1_1_coef_vector_1a8663d9edb1564b67259f85cdfb6c2153" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((*</highlight><highlight class="keyword">this</highlight><highlight class="normal">)[i][j][<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>]);<sp/>}</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="182" refid="struct_emp_cyl_s_l_1_1_coef_matrix" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_emp_cyl_s_l_1_1_coef_matrix" kindref="compound">CoefMatrix</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;MatrixM&gt;&gt;</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="184" refid="struct_emp_cyl_s_l_1_1_coef_matrix_1a6bb03e4fe7c2889a96877ad456616f51" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::MatrixXd<sp/>&amp;<sp/><ref refid="struct_emp_cyl_s_l_1_1_coef_matrix_1a6bb03e4fe7c2889a96877ad456616f51" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((*</highlight><highlight class="keyword">this</highlight><highlight class="normal">)[i][j][<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>]);<sp/>}</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"></highlight></codeline>
-<codeline lineno="188"><highlight class="normal"></highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Test<sp/>for<sp/>eof<sp/>trim</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="190" refid="class_emp_cyl_s_l_1a53492da2afd7c58fe5ab4264aea84007" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt;&gt;<sp/><ref refid="class_emp_cyl_s_l_1a53492da2afd7c58fe5ab4264aea84007" kindref="member">tvar</ref>;</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Error<sp/>analysis</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="193" refid="class_emp_cyl_s_l_1a7b6c8bcf8ee3a9ef0c055fc98a139fd6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_emp_cyl_s_l_1_1_coef_vector" kindref="compound">CoefVector</ref><sp/><sp/><ref refid="class_emp_cyl_s_l_1a7b6c8bcf8ee3a9ef0c055fc98a139fd6" kindref="member">covV</ref>;</highlight></codeline>
-<codeline lineno="194" refid="class_emp_cyl_s_l_1a9c0aa23a0d1b44c9c421d87b1b64a0b4" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_emp_cyl_s_l_1_1_coef_matrix" kindref="compound">CoefMatrix</ref><sp/><sp/><ref refid="class_emp_cyl_s_l_1a9c0aa23a0d1b44c9c421d87b1b64a0b4" kindref="member">covM</ref>;</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196" refid="class_emp_cyl_s_l_1a23629a6b09bcf37a016db8a2cde23909" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;unsigned&gt;<sp/><sp/>&gt;<sp/><ref refid="class_emp_cyl_s_l_1a23629a6b09bcf37a016db8a2cde23909" kindref="member">numbT1</ref>;</highlight></codeline>
-<codeline lineno="197" refid="class_emp_cyl_s_l_1a8e7c4e2797ecbb1df34246bd489ce330" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;double&gt;<sp/><sp/>&gt;<sp/><ref refid="class_emp_cyl_s_l_1a8e7c4e2797ecbb1df34246bd489ce330" kindref="member">massT1</ref>;</highlight></codeline>
-<codeline lineno="198" refid="class_emp_cyl_s_l_1a1085cebe7aaa975b9ee5a08c5f998787" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;unsigned&gt;<sp/><ref refid="class_emp_cyl_s_l_1a1085cebe7aaa975b9ee5a08c5f998787" kindref="member">numbT</ref>;</highlight></codeline>
-<codeline lineno="199" refid="class_emp_cyl_s_l_1ae4013c1b10e1ee68436d77b2576d23f3" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_emp_cyl_s_l_1ae4013c1b10e1ee68436d77b2576d23f3" kindref="member">massT</ref>;</highlight></codeline>
-<codeline lineno="200" refid="class_emp_cyl_s_l_1a0372fb0957caf5a86e74d4f594bff96f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7e8c6aaa07f701a510982df758e2722c" kindref="member">sampT</ref>,<sp/><ref refid="class_emp_cyl_s_l_1a0372fb0957caf5a86e74d4f594bff96f" kindref="member">defSampT</ref>;</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"></highlight></codeline>
-<codeline lineno="202"><highlight class="normal"></highlight></codeline>
-<codeline lineno="203" refid="class_emp_cyl_s_l_1a554140e8382732014abb3e95f8c54f91" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_emp_cyl_s_l_1a554140e8382732014abb3e95f8c54f91" kindref="member">vc</ref>,<sp/><ref refid="class_emp_cyl_s_l_1a67a63f563459749ff1d353c9debce1ad" kindref="member">vs</ref>;</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205" refid="class_emp_cyl_s_l_1aaceea5f18b07d1825484be021afb0392" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_emp_cyl_s_l_1a00277782d89dd76900b33011a3013a6e" kindref="member">tabp</ref>,<sp/><ref refid="class_emp_cyl_s_l_1a4a4aef6e003e170418c14ffeec5157a6" kindref="member">tabf</ref>,<sp/><ref refid="class_emp_cyl_s_l_1aaceea5f18b07d1825484be021afb0392" kindref="member">tabd</ref>;</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="208" refid="class_emp_cyl_s_l_1ac1da77e65816b15f8514d8869b8bdcc3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ac1da77e65816b15f8514d8869b8bdcc3" kindref="member">hmagic</ref><sp/>=<sp/>0xc0a57a1;</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211" refid="class_emp_cyl_s_l_1aaae6d0d738e28ae17f0450ac8888ff38" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aaae6d0d738e28ae17f0450ac8888ff38" kindref="member">cmagic</ref><sp/>=<sp/>0xc0a57a3;</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight></codeline>
-<codeline lineno="213" refid="class_emp_cyl_s_l_1af20a77b1f4fd2c8e813d98711460e695" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;short&gt;<sp/><ref refid="class_emp_cyl_s_l_1af20a77b1f4fd2c8e813d98711460e695" kindref="member">coefs_made</ref>;</highlight></codeline>
-<codeline lineno="214" refid="class_emp_cyl_s_l_1a69c22647b58e9ec9f2cbea6abc59ca34" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a69c22647b58e9ec9f2cbea6abc59ca34" kindref="member">eof_made</ref>;</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="216" refid="class_emp_cyl_s_l_1ad5c739203d28501087b57c1745a932e5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1a5f02b326041b8aa3527a4a22b0505f73" kindref="member">SphModTblPtr</ref><sp/><ref refid="class_emp_cyl_s_l_1ad5c739203d28501087b57c1745a932e5" kindref="member">make_sl</ref>();</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"></highlight></codeline>
-<codeline lineno="218" refid="class_emp_cyl_s_l_1ade494a2d028ce2cafe796f6bae9af742" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ade494a2d028ce2cafe796f6bae9af742" kindref="member">make_grid</ref>();</highlight></codeline>
-<codeline lineno="219" refid="class_emp_cyl_s_l_1a1d8a54dea56c53271250a52a36268d26" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a1d8a54dea56c53271250a52a36268d26" kindref="member">send_eof_grid</ref>();</highlight></codeline>
-<codeline lineno="220" refid="class_emp_cyl_s_l_1ae77c27b192bfc7feb6fc5834f723b73c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ae77c27b192bfc7feb6fc5834f723b73c" kindref="member">receive_eof</ref><sp/><sp/><sp/><sp/><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>request_id,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>);</highlight></codeline>
-<codeline lineno="221" refid="class_emp_cyl_s_l_1a9261c96b5c2f59bf357e9eff0e0f005d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a9261c96b5c2f59bf357e9eff0e0f005d" kindref="member">compute_eof_grid</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>request_id,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>);</highlight></codeline>
-<codeline lineno="222" refid="class_emp_cyl_s_l_1a57d043d255d6b3a9a30c2be6bbbcb329" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a57d043d255d6b3a9a30c2be6bbbcb329" kindref="member">compute_even_odd</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>request_id,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>);</highlight></codeline>
-<codeline lineno="223" refid="class_emp_cyl_s_l_1aa15dc03935856aaebdb4ee70778b6877" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aa15dc03935856aaebdb4ee70778b6877" kindref="member">eigen_problem</ref><sp/><sp/><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>request_id,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>,<sp/><ref refid="class_timer" kindref="compound">Timer</ref>&amp;<sp/>timer);</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight></codeline>
-<codeline lineno="225" refid="class_emp_cyl_s_l_1a0282993cc0ecbc8077b3716f5d423240" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0282993cc0ecbc8077b3716f5d423240" kindref="member">setup_eof_grid</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="226" refid="class_emp_cyl_s_l_1a66ecaa8742fce737aa016072c5fc8d83" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a66ecaa8742fce737aa016072c5fc8d83" kindref="member">parityCheck</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>prefix);</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight></codeline>
-<codeline lineno="229" refid="class_emp_cyl_s_l_1ae2b67b9d3e70ccf7e285d06a7b8a9ea5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ae2b67b9d3e70ccf7e285d06a7b8a9ea5" kindref="member">WriteH5Cache</ref>();</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="232" refid="class_emp_cyl_s_l_1ae0483d13ea7eb6db18105537d26e8e9a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ae0483d13ea7eb6db18105537d26e8e9a" kindref="member">ReadH5Cache</ref>();</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235" refid="class_emp_cyl_s_l_1a0f441f656522cec142a0576d0b8712b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_emp_cyl_s_l_1a0f441f656522cec142a0576d0b8712b9" kindref="member">Version</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;1.0&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"></highlight></codeline>
-<codeline lineno="238" refid="class_emp_cyl_s_l_1ab771f6442cb98992024f528d9711004e" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_emp_cyl_s_l_1ab771f6442cb98992024f528d9711004e" kindref="member">cachefile</ref>;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>1=write,<sp/>0=read</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>return:<sp/>0=failure</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="241" refid="class_emp_cyl_s_l_1a895b2b9cd9a80389b0a8e918bedee390" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a895b2b9cd9a80389b0a8e918bedee390" kindref="member">cache_grid</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/>std::string<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="242" refid="class_emp_cyl_s_l_1af7a9d3523d76046d94b09fbee943f388" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1af7a9d3523d76046d94b09fbee943f388" kindref="member">integral</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="243" refid="class_emp_cyl_s_l_1af2304c89b46f7bbbfb5ba0ffc9f91c3d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1af2304c89b46f7bbbfb5ba0ffc9f91c3d" kindref="member">get_pot</ref>(Eigen::MatrixXd&amp;,<sp/>Eigen::MatrixXd&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="244" refid="class_emp_cyl_s_l_1aad0b13603aa2c4cc3af549530800d383" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aad0b13603aa2c4cc3af549530800d383" kindref="member">massR</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="245" refid="class_emp_cyl_s_l_1adc40eee109b96edacb4bcf58e34cf881" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1adc40eee109b96edacb4bcf58e34cf881" kindref="member">densR</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247" refid="class_emp_cyl_s_l_1a8a6c84c7601d6a29836df1456dcf59c6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_linear1d" kindref="compound">Linear1d</ref><sp/><ref refid="class_emp_cyl_s_l_1a8a6c84c7601d6a29836df1456dcf59c6" kindref="member">densRg</ref>,<sp/><ref refid="class_emp_cyl_s_l_1ad4b19dd1a4221dd2cb5625aa3d2e9081" kindref="member">massRg</ref>;</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight></codeline>
-<codeline lineno="250" refid="class_emp_cyl_s_l_1a174b3c5c2d43c1c92ae475a2e9bd5768" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>YAML::Node<sp/><ref refid="class_emp_cyl_s_l_1a174b3c5c2d43c1c92ae475a2e9bd5768" kindref="member">getHeader</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="class_emp_cyl_s_l_1ab771f6442cb98992024f528d9711004e" kindref="member">cachefile</ref>);</highlight></codeline>
-<codeline lineno="251" refid="class_emp_cyl_s_l_1a28d96e9218fc77f4c9b65c2cc7142f3d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>YAML::Node<sp/><ref refid="class_emp_cyl_s_l_1a28d96e9218fc77f4c9b65c2cc7142f3d" kindref="member">getHeader_hdf5</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="class_emp_cyl_s_l_1ab771f6442cb98992024f528d9711004e" kindref="member">cachefile</ref>);</highlight></codeline>
-<codeline lineno="252" refid="class_emp_cyl_s_l_1adbca4138f5230f4e2817376a73e33a1b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>YAML::Node<sp/><ref refid="class_emp_cyl_s_l_1adbca4138f5230f4e2817376a73e33a1b" kindref="member">getHeader_binary</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="class_emp_cyl_s_l_1ab771f6442cb98992024f528d9711004e" kindref="member">cachefile</ref>);</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255" refid="class_emp_cyl_s_l_1_1_p_c_aelement" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement" kindref="compound">PCAelement</ref></highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"></highlight></codeline>
-<codeline lineno="260" refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a09bec389e30520fc0c10ba746d5c187a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a09bec389e30520fc0c10ba746d5c187a" kindref="member">evalJK</ref>;</highlight></codeline>
-<codeline lineno="261" refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a42880da355677243fbb6e3ce89d6d3b8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a42880da355677243fbb6e3ce89d6d3b8" kindref="member">meanJK</ref>;</highlight></codeline>
-<codeline lineno="262" refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a160363390a8120d65bccce6eb9482697" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a160363390a8120d65bccce6eb9482697" kindref="member">ratio</ref>;</highlight></codeline>
-<codeline lineno="263" refid="class_emp_cyl_s_l_1_1_p_c_aelement_1abcab06d18640eb40245ef98d345292bb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1abcab06d18640eb40245ef98d345292bb" kindref="member">covrJK</ref>;</highlight></codeline>
-<codeline lineno="264" refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a9b4260adb897ddeea93022b7c03ef6a9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a9b4260adb897ddeea93022b7c03ef6a9" kindref="member">evecJK</ref>;</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="268" refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a016d57a06df812a74b05cfe46885d717" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a016d57a06df812a74b05cfe46885d717" kindref="member">PCAelement</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a42880da355677243fbb6e3ce89d6d3b8" kindref="member">meanJK</ref>.resize(n);</highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a160363390a8120d65bccce6eb9482697" kindref="member">ratio</ref><sp/>.resize(n);</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1abcab06d18640eb40245ef98d345292bb" kindref="member">covrJK</ref>.resize(n,<sp/>n);</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a9b4260adb897ddeea93022b7c03ef6a9" kindref="member">evecJK</ref>.resize(n,<sp/>n);</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="276" refid="class_emp_cyl_s_l_1_1_p_c_aelement_1addd52a31aeea197f2b903d8346f74335" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1addd52a31aeea197f2b903d8346f74335" kindref="member">reset</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a42880da355677243fbb6e3ce89d6d3b8" kindref="member">meanJK</ref>.setZero();</highlight></codeline>
-<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a160363390a8120d65bccce6eb9482697" kindref="member">ratio</ref><sp/>.setZero();</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1abcab06d18640eb40245ef98d345292bb" kindref="member">covrJK</ref>.setZero();</highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a9b4260adb897ddeea93022b7c03ef6a9" kindref="member">evecJK</ref>.setZero();</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"></highlight></codeline>
-<codeline lineno="285" refid="class_emp_cyl_s_l_1a97c584dfe52e938ff4511176367bbaee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;PCAelement&gt;<sp/><ref refid="class_emp_cyl_s_l_1a97c584dfe52e938ff4511176367bbaee" kindref="member">PCAelemPtr</ref>;</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"></highlight></codeline>
-<codeline lineno="288" refid="class_emp_cyl_s_l_1_1_p_c_abasis" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl_s_l_1_1_p_c_abasis" kindref="compound">PCAbasis</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::map&lt;int,<sp/>PCAelemPtr&gt;</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"></highlight></codeline>
-<codeline lineno="293" refid="class_emp_cyl_s_l_1_1_p_c_abasis_1a80a2f0dd3a862da4ce77282a49805d5c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_abasis_1a80a2f0dd3a862da4ce77282a49805d5c" kindref="member">Tnumb</ref>;</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"></highlight></codeline>
-<codeline lineno="296" refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ac59645ee46d91f0d558e744c7ed5887c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ac59645ee46d91f0d558e744c7ed5887c" kindref="member">Tmass</ref>;</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299" refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ae9fb4a89a2cacf4563c3c7227637807f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ae9fb4a89a2cacf4563c3c7227637807f" kindref="member">PCAbasis</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>=0;<sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>&lt;=<ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>;<sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>++)<sp/>{</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(*this)[<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>]<sp/>=<sp/><ref refid="class_emp_cyl_s_l_1a97c584dfe52e938ff4511176367bbaee" kindref="member">PCAelemPtr</ref>(</highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_aelement" kindref="compound">PCAelement</ref>(n));</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_abasis_1adff7be2bcaa158f1a2beb547548e73ab" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight></codeline>
-<codeline lineno="308" refid="class_emp_cyl_s_l_1_1_p_c_abasis_1adff7be2bcaa158f1a2beb547548e73ab" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_abasis_1adff7be2bcaa158f1a2beb547548e73ab" kindref="member">reset</ref>()</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>v<sp/>:<sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">)<sp/>v.second-&gt;reset();</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_abasis_1a80a2f0dd3a862da4ce77282a49805d5c" kindref="member">Tnumb</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ac59645ee46d91f0d558e744c7ed5887c" kindref="member">Tmass</ref><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"></highlight></codeline>
-<codeline lineno="315"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"></highlight></codeline>
-<codeline lineno="317" refid="class_emp_cyl_s_l_1a51068281e8060eadcd0251bbcb73150c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;PCAbasis&gt;<sp/><ref refid="class_emp_cyl_s_l_1a51068281e8060eadcd0251bbcb73150c" kindref="member">PCAbasisPtr</ref>;</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"></highlight></codeline>
-<codeline lineno="320" refid="class_emp_cyl_s_l_1aee6bee90dbadeb9b41b8f83d4f6e49a7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1a51068281e8060eadcd0251bbcb73150c" kindref="member">PCAbasisPtr</ref><sp/><ref refid="class_emp_cyl_s_l_1aee6bee90dbadeb9b41b8f83d4f6e49a7" kindref="member">pb</ref>;</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"></highlight></codeline>
-<codeline lineno="322" refid="class_emp_cyl_s_l_1ac5989dfc11361c8449b9aa8bfb5a4a3c" refkind="member"><highlight class="normal"><sp/><sp/>pthread_mutex_t<sp/><ref refid="class_emp_cyl_s_l_1ac5989dfc11361c8449b9aa8bfb5a4a3c" kindref="member">used_lock</ref>;</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"></highlight></codeline>
-<codeline lineno="325" refid="class_emp_cyl_s_l_1aa4f6f96e4ffed81950ee435d661f98fc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aa4f6f96e4ffed81950ee435d661f98fc" kindref="member">accumulate_thread_call</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">,<sp/>std::vector&lt;Particle&gt;*<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlevel,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose);</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"></highlight></codeline>
-<codeline lineno="328" refid="class_emp_cyl_s_l_1a03c78efa441af75c60e8165e0c227b3d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a03c78efa441af75c60e8165e0c227b3d" kindref="member">accumulate_eof_thread_call</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">,<sp/>std::vector&lt;Particle&gt;*<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose);</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"></highlight></codeline>
-<codeline lineno="330"><highlight class="normal"></highlight></codeline>
-<codeline lineno="332" refid="class_emp_cyl_s_l_1a0becb34528efb75dd76d60b4a02084d8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0becb34528efb75dd76d60b4a02084d8" kindref="member">EVEN_M</ref>;</highlight></codeline>
-<codeline lineno="333"><highlight class="normal"></highlight></codeline>
-<codeline lineno="335" refid="class_emp_cyl_s_l_1a2f44992edff81154f1026271d9b5681e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a2f44992edff81154f1026271d9b5681e" kindref="member">EvenOdd</ref>;</highlight></codeline>
-<codeline lineno="336"><highlight class="normal"></highlight></codeline>
-<codeline lineno="338" refid="class_emp_cyl_s_l_1aa416edc90a399610bc9dfbe3f5fae285" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aa416edc90a399610bc9dfbe3f5fae285" kindref="member">Neven</ref>,<sp/><ref refid="class_emp_cyl_s_l_1a25e0bb43aff536fb91927ce3aa30c4e7" kindref="member">Nodd</ref>;</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"></highlight></codeline>
-<codeline lineno="341" refid="class_emp_cyl_s_l_1a9dc835dbfd02c64df6a771a709a9d3ce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a9dc835dbfd02c64df6a771a709a9d3ce" kindref="member">use_mpi</ref>;</highlight></codeline>
-<codeline lineno="342"><highlight class="normal"></highlight></codeline>
-<codeline lineno="343"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"></highlight></codeline>
-<codeline lineno="347" refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793" kindref="member">TKType</ref><sp/>{</highlight></codeline>
-<codeline lineno="348" refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793afab918d81116908252f64b5c7e2eaa99" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793afab918d81116908252f64b5c7e2eaa99" kindref="member">Hall</ref>,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="349" refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793aaef8f7277ef603757d44900f96e17d67" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793aaef8f7277ef603757d44900f96e17d67" kindref="member">Truncate</ref>,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793a955b9c65bb82613a6ed0a36482bfbded" kindref="member">None</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="351" refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793a955b9c65bb82613a6ed0a36482bfbded" refkind="member"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="352"><highlight class="normal"></highlight></codeline>
-<codeline lineno="354" refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07f" kindref="member">EmpModel</ref><sp/>{</highlight></codeline>
-<codeline lineno="355" refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa3371db82e8230c5a156ba0bb2b31bef5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa3371db82e8230c5a156ba0bb2b31bef5" kindref="member">Exponential</ref>,</highlight></codeline>
-<codeline lineno="356" refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa371f52b51dc8b5b0aeb0d215b04000bd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa371f52b51dc8b5b0aeb0d215b04000bd" kindref="member">Gaussian</ref>,<sp/></highlight></codeline>
-<codeline lineno="357" refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa9bd88c8027e6d12627cae69439530779" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa9bd88c8027e6d12627cae69439530779" kindref="member">Plummer</ref>,</highlight></codeline>
-<codeline lineno="358" refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa3cc496a7b14b9c9ede3f215514ab2302" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa3cc496a7b14b9c9ede3f215514ab2302" kindref="member">Power</ref>,</highlight></codeline>
-<codeline lineno="359" refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa67567924e95e58ef6bb9ecd65d96a077" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa67567924e95e58ef6bb9ecd65d96a077" kindref="member">Deproject</ref>,</highlight></codeline>
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-<codeline lineno="361"><highlight class="normal"></highlight></codeline>
-<codeline lineno="363" refid="class_emp_cyl_s_l_1_1_axi_disk" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl_s_l_1_1_axi_disk" kindref="compound">AxiDisk</ref></highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="365"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="366" refid="class_emp_cyl_s_l_1_1_axi_disk_1a9f5ac6ec69ca06b68d48b23b6c8c034f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a9f5ac6ec69ca06b68d48b23b6c8c034f" kindref="member">ID</ref>;</highlight></codeline>
-<codeline lineno="367" refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>;</highlight></codeline>
-<codeline lineno="368" refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="369"><highlight class="normal"></highlight></codeline>
-<codeline lineno="370"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="371"><highlight class="normal"></highlight></codeline>
-<codeline lineno="373" refid="class_emp_cyl_s_l_1_1_axi_disk_1a47284137e24ca113e6250992a26d5920" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a47284137e24ca113e6250992a26d5920" kindref="member">AxiDisk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>=1,<sp/>std::string<sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">=</highlight><highlight class="stringliteral">&quot;AxiDisk&quot;</highlight><highlight class="normal">)<sp/>:<sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>(<ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>),<sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a9f5ac6ec69ca06b68d48b23b6c8c034f" kindref="member">ID</ref>(id)<sp/>{}</highlight></codeline>
-<codeline lineno="374"><highlight class="normal"></highlight></codeline>
-<codeline lineno="376" refid="class_emp_cyl_s_l_1_1_axi_disk_1a1ed84b13e59c6571fd49aeb90c452675" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a1ed84b13e59c6571fd49aeb90c452675" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi=0.)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="377"><highlight class="normal"></highlight></codeline>
-<codeline lineno="379" refid="class_emp_cyl_s_l_1_1_axi_disk_1ab1aa18251d8ad3196952f490dde2b6cb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ab1aa18251d8ad3196952f490dde2b6cb" kindref="member">getID</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a9f5ac6ec69ca06b68d48b23b6c8c034f" kindref="member">ID</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="380"><highlight class="normal"></highlight></codeline>
-<codeline lineno="382" refid="class_emp_cyl_s_l_1_1_axi_disk_1af9114d56b03e52a9a939b091d44f191f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1af9114d56b03e52a9a939b091d44f191f" kindref="member">getMass</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" kindref="member">M</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"></highlight></codeline>
-<codeline lineno="385" refid="class_emp_cyl_s_l_1_1_axi_disk_1a15ec720689676ef218d343bffdc86c2a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1a15ec720689676ef218d343bffdc86c2a" kindref="member">getParams</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" kindref="member">params</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="386"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="388" refid="class_emp_cyl_s_l_1a686c18b7deb23a96b0608d96a7d13164" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;AxiDisk&gt;<sp/><ref refid="class_emp_cyl_s_l_1a686c18b7deb23a96b0608d96a7d13164" kindref="member">AxiDiskPtr</ref>;</highlight></codeline>
-<codeline lineno="389"><highlight class="normal"></highlight></codeline>
-<codeline lineno="391" refid="class_emp_cyl_s_l_1a7421fd16b5bc2b716abdadeb2ee4fbda" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7421fd16b5bc2b716abdadeb2ee4fbda" kindref="member">PCAVAR</ref>;</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"></highlight></codeline>
-<codeline lineno="394" refid="class_emp_cyl_s_l_1a591fc0a920c89c08db6e8cdeb288daf5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a591fc0a920c89c08db6e8cdeb288daf5" kindref="member">PCAVTK</ref>;</highlight></codeline>
-<codeline lineno="395"><highlight class="normal"></highlight></codeline>
-<codeline lineno="397" refid="class_emp_cyl_s_l_1ad1c941f70ba409b1267a5c602192a06f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ad1c941f70ba409b1267a5c602192a06f" kindref="member">PCAEOF</ref>;</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight></codeline>
-<codeline lineno="400" refid="class_emp_cyl_s_l_1a326d046bf01703dccd3808fde1f366ef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a326d046bf01703dccd3808fde1f366ef" kindref="member">PCADRY</ref>;</highlight></codeline>
-<codeline lineno="401"><highlight class="normal"></highlight></codeline>
-<codeline lineno="403" refid="class_emp_cyl_s_l_1a4efa4f0654c7c45724897fa019a7b8b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a4efa4f0654c7c45724897fa019a7b8b3" kindref="member">VTKFRQ</ref>;</highlight></codeline>
-<codeline lineno="404"><highlight class="normal"></highlight></codeline>
-<codeline lineno="407" refid="class_emp_cyl_s_l_1a69cea546b093407c96f564e9e4fc132a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a69cea546b093407c96f564e9e4fc132a" kindref="member">CMAPR</ref>;</highlight></codeline>
-<codeline lineno="408"><highlight class="normal"></highlight></codeline>
-<codeline lineno="411" refid="class_emp_cyl_s_l_1a56526a140c4c34248902966681124db2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a56526a140c4c34248902966681124db2" kindref="member">CMAPZ</ref>;</highlight></codeline>
-<codeline lineno="412"><highlight class="normal"></highlight></codeline>
-<codeline lineno="414" refid="class_emp_cyl_s_l_1a448caae9d6d4f439c18ca51d9bebe478" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a448caae9d6d4f439c18ca51d9bebe478" kindref="member">logarithmic</ref>;</highlight></codeline>
-<codeline lineno="415"><highlight class="normal"></highlight></codeline>
-<codeline lineno="417" refid="class_emp_cyl_s_l_1ae63d3655cdce09b95b3d656b3fb2b1bd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ae63d3655cdce09b95b3d656b3fb2b1bd" kindref="member">enforce_limits</ref>;</highlight></codeline>
-<codeline lineno="418"><highlight class="normal"></highlight></codeline>
-<codeline lineno="420" refid="class_emp_cyl_s_l_1acab556b4b8f88e42950851f45fd4eaf5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07f" kindref="member">EmpModel</ref><sp/><ref refid="class_emp_cyl_s_l_1acab556b4b8f88e42950851f45fd4eaf5" kindref="member">mtype</ref>;</highlight></codeline>
-<codeline lineno="421"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="423" refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>;</highlight></codeline>
-<codeline lineno="424"><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="426" refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>;</highlight></codeline>
-<codeline lineno="427"><highlight class="normal"></highlight></codeline>
-<codeline lineno="429" refid="class_emp_cyl_s_l_1a3a514d4baf7c51ad65ae9c0934313b08" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a3a514d4baf7c51ad65ae9c0934313b08" kindref="member">NOUT</ref>;</highlight></codeline>
-<codeline lineno="430"><highlight class="normal"></highlight></codeline>
-<codeline lineno="432" refid="class_emp_cyl_s_l_1aafe9d97b940c6bf5a322784c53d49b5f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aafe9d97b940c6bf5a322784c53d49b5f" kindref="member">NUMR</ref>;</highlight></codeline>
-<codeline lineno="433"><highlight class="normal"></highlight></codeline>
-<codeline lineno="436" refid="class_emp_cyl_s_l_1afb2e483e8e61f9b89e6e60c5a9042c71" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1afb2e483e8e61f9b89e6e60c5a9042c71" kindref="member">HALLFREQ</ref>;</highlight></codeline>
-<codeline lineno="437"><highlight class="normal"></highlight></codeline>
-<codeline lineno="439" refid="class_emp_cyl_s_l_1ababc9c96aa1aafb45b9eac7d5870e127" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ababc9c96aa1aafb45b9eac7d5870e127" kindref="member">HEXP</ref>;</highlight></codeline>
-<codeline lineno="440"><highlight class="normal"></highlight></codeline>
-<codeline lineno="442" refid="class_emp_cyl_s_l_1a881a2feeaab884247de5ea52a244a957" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a881a2feeaab884247de5ea52a244a957" kindref="member">RMIN</ref>;</highlight></codeline>
-<codeline lineno="443"><highlight class="normal"></highlight></codeline>
-<codeline lineno="445" refid="class_emp_cyl_s_l_1a3e03b95b63b369896cbbaf74d0b6ccda" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a3e03b95b63b369896cbbaf74d0b6ccda" kindref="member">RMAX</ref>;</highlight></codeline>
-<codeline lineno="446"><highlight class="normal"></highlight></codeline>
-<codeline lineno="448" refid="class_emp_cyl_s_l_1ac9e89c53c5668ec51122f129aea8d203" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ac9e89c53c5668ec51122f129aea8d203" kindref="member">PPOW</ref>;</highlight></codeline>
-<codeline lineno="449"><highlight class="normal"></highlight></codeline>
-<codeline lineno="451" refid="class_emp_cyl_s_l_1adc51b0fb5f7e79e450d931ba715e75ab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1adc51b0fb5f7e79e450d931ba715e75ab" kindref="member">NewCache</ref>;</highlight></codeline>
-<codeline lineno="452"><highlight class="normal"></highlight></codeline>
-<codeline lineno="454" refid="class_emp_cyl_s_l_1a62e259dd548f50712047634709d45b29" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a62e259dd548f50712047634709d45b29" kindref="member">NewCoefs</ref>;</highlight></codeline>
-<codeline lineno="455"><highlight class="normal"></highlight></codeline>
-<codeline lineno="457" refid="class_emp_cyl_s_l_1a7b1705c7239daa9a9274ea07cc687ea8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::map&lt;EmpModel,<sp/>std::string&gt;<sp/><ref refid="class_emp_cyl_s_l_1a7b1705c7239daa9a9274ea07cc687ea8" kindref="member">EmpModelLabs</ref>;</highlight></codeline>
-<codeline lineno="458"><highlight class="normal"></highlight></codeline>
-<codeline lineno="460" refid="class_emp_cyl_s_l_1a010b7760c0b40c5c7eb43f0913d75f9f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a010b7760c0b40c5c7eb43f0913d75f9f" kindref="member">HFAC</ref>;</highlight></codeline>
-<codeline lineno="461"><highlight class="normal"></highlight></codeline>
-<codeline lineno="472" refid="class_emp_cyl_s_l_1a5fb42c68731465996008ec4276d458d5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a5fb42c68731465996008ec4276d458d5" kindref="member">VFLAG</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default=0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="473"><highlight class="normal"></highlight></codeline>
-<codeline lineno="474"><highlight class="normal"></highlight></codeline>
-<codeline lineno="476" refid="class_emp_cyl_s_l_1af99016daf180ebe406394ee57e3b9a16" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1af99016daf180ebe406394ee57e3b9a16" kindref="member">EmpCylSL</ref>();</highlight></codeline>
-<codeline lineno="477"><highlight class="normal"></highlight></codeline>
-<codeline lineno="500" refid="class_emp_cyl_s_l_1a080959b56ba7865b65f5c158f520d0c1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1a080959b56ba7865b65f5c158f520d0c1" kindref="member">EmpCylSL</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numr,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nord,</highlight></codeline>
-<codeline lineno="501"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ascale,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>hscale,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a25e0bb43aff536fb91927ce3aa30c4e7" kindref="member">Nodd</ref>,</highlight></codeline>
-<codeline lineno="502"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>cachename);</highlight></codeline>
-<codeline lineno="503"><highlight class="normal"></highlight></codeline>
-<codeline lineno="505" refid="class_emp_cyl_s_l_1a3a311372368aab409ba209051da72adc" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1a3a311372368aab409ba209051da72adc" kindref="member">EmpCylSL</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlim,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>cache);</highlight></codeline>
-<codeline lineno="506"><highlight class="normal"></highlight></codeline>
-<codeline lineno="508" refid="class_emp_cyl_s_l_1af310cb890568c5493a88e3a06db16d5d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1af310cb890568c5493a88e3a06db16d5d" kindref="member">~EmpCylSL</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="509"><highlight class="normal"></highlight></codeline>
-<codeline lineno="511" refid="class_emp_cyl_s_l_1a1d5d673b23425cb29f6427b30dc804e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a1d5d673b23425cb29f6427b30dc804e9" kindref="member">reset</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numr,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nord,</highlight></codeline>
-<codeline lineno="512"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ascale,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>hscale,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a25e0bb43aff536fb91927ce3aa30c4e7" kindref="member">Nodd</ref>,</highlight></codeline>
-<codeline lineno="513"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>cachename);</highlight></codeline>
-<codeline lineno="514"><highlight class="normal"></highlight></codeline>
-<codeline lineno="516" refid="class_emp_cyl_s_l_1a8e24889349da789a18bc4e97534ce3dd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a8e24889349da789a18bc4e97534ce3dd" kindref="member">read_eof_header</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>eof_file);</highlight></codeline>
-<codeline lineno="517"><highlight class="normal"></highlight></codeline>
-<codeline lineno="519" refid="class_emp_cyl_s_l_1a2df1c13c177b4650056eac8c14e348e6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a2df1c13c177b4650056eac8c14e348e6" kindref="member">read_eof_file</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>eof_file);</highlight></codeline>
-<codeline lineno="520"><highlight class="normal"></highlight></codeline>
-<codeline lineno="522" refid="class_emp_cyl_s_l_1a232a9a2eac79772432cc3fc033ef46b7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a232a9a2eac79772432cc3fc033ef46b7" kindref="member">dump_eof_file</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>eof_file,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>dump_file);</highlight></codeline>
-<codeline lineno="523"><highlight class="normal"></highlight></codeline>
-<codeline lineno="525" refid="class_emp_cyl_s_l_1a508f0810f70a5c66750bde83503591ad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a508f0810f70a5c66750bde83503591ad" kindref="member">read_cache</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="526"><highlight class="normal"></highlight></codeline>
-<codeline lineno="528" refid="class_emp_cyl_s_l_1ab3bfa5b72ebb7dd2f3a44705de905b99" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ab3bfa5b72ebb7dd2f3a44705de905b99" kindref="member">get_mmax</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>;}</highlight></codeline>
-<codeline lineno="529"><highlight class="normal"></highlight></codeline>
-<codeline lineno="531" refid="class_emp_cyl_s_l_1adcff853a8bc392ce63ec4f2ba5f13cfd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1adcff853a8bc392ce63ec4f2ba5f13cfd" kindref="member">set_nrange</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nmin,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nmax)<sp/>{<ref refid="class_emp_cyl_s_l_1a6ec0b65d4efab53a29c62d0afb8fb91d" kindref="member">NMIN</ref>=nmin;<sp/><ref refid="class_emp_cyl_s_l_1aaef776ee74e1bf29c608b6e635111049" kindref="member">NLIM</ref><sp/>=<sp/>nmax;}</highlight></codeline>
-<codeline lineno="532"><highlight class="normal"></highlight></codeline>
-<codeline lineno="534" refid="class_emp_cyl_s_l_1a67fbb41e7028467a5f39042d0a9d0874" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a67fbb41e7028467a5f39042d0a9d0874" kindref="member">set_mrange</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmin,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax)<sp/>{<ref refid="class_emp_cyl_s_l_1aff9c53fa3175a325355c0f6826dc18ec" kindref="member">MMIN</ref>=mmin;<sp/><ref refid="class_emp_cyl_s_l_1a450128216652014ea18eb6c325f04945" kindref="member">MLIM</ref><sp/>=<sp/>mmax;}</highlight></codeline>
-<codeline lineno="535"><highlight class="normal"></highlight></codeline>
-<codeline lineno="537" refid="class_emp_cyl_s_l_1ad025f491b47c2f289833180d974fad00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ad025f491b47c2f289833180d974fad00" kindref="member">set_mmin</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmin)<sp/>{<ref refid="class_emp_cyl_s_l_1aff9c53fa3175a325355c0f6826dc18ec" kindref="member">MMIN</ref><sp/>=<sp/>mmin;}</highlight></codeline>
-<codeline lineno="538"><highlight class="normal"></highlight></codeline>
-<codeline lineno="540" refid="class_emp_cyl_s_l_1a55b3fe32f3c3eea485767941d0110107" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a55b3fe32f3c3eea485767941d0110107" kindref="member">set_mlim</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlim)<sp/>{<ref refid="class_emp_cyl_s_l_1a450128216652014ea18eb6c325f04945" kindref="member">MLIM</ref><sp/>=<sp/>mlim;}</highlight></codeline>
-<codeline lineno="541"><highlight class="normal"></highlight></codeline>
-<codeline lineno="543" refid="class_emp_cyl_s_l_1ae86d4dc7fab3032fbe588eea0bdd1d02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ae86d4dc7fab3032fbe588eea0bdd1d02" kindref="member">get_mmin</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aff9c53fa3175a325355c0f6826dc18ec" kindref="member">MMIN</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="544"><highlight class="normal"></highlight></codeline>
-<codeline lineno="546" refid="class_emp_cyl_s_l_1a7da7158d060f7d325bd5146d6f964cc0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7da7158d060f7d325bd5146d6f964cc0" kindref="member">get_mlim</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a450128216652014ea18eb6c325f04945" kindref="member">MLIM</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="547"><highlight class="normal"></highlight></codeline>
-<codeline lineno="549" refid="class_emp_cyl_s_l_1a54a291607a6a7439668c32431496fe9f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a54a291607a6a7439668c32431496fe9f" kindref="member">get_order</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>;}</highlight></codeline>
-<codeline lineno="550"><highlight class="normal"></highlight></codeline>
-<codeline lineno="552" refid="class_emp_cyl_s_l_1a4564a78e83de79884e1c1c886a345a4c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a4564a78e83de79884e1c1c886a345a4c" kindref="member">z_to_y</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="553"><highlight class="normal"></highlight></codeline>
-<codeline lineno="555" refid="class_emp_cyl_s_l_1a40102949b815daef674f1ca432e4940b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a40102949b815daef674f1ca432e4940b" kindref="member">y_to_z</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y);</highlight></codeline>
-<codeline lineno="556"><highlight class="normal"></highlight></codeline>
-<codeline lineno="558" refid="class_emp_cyl_s_l_1a142075bc56f2792e7f9427a1b20fe43e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a142075bc56f2792e7f9427a1b20fe43e" kindref="member">d_y_to_z</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y);</highlight></codeline>
-<codeline lineno="559"><highlight class="normal"></highlight></codeline>
-<codeline lineno="564" refid="class_emp_cyl_s_l_1a791dca5c81aa700228f61cbe00327113" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a791dca5c81aa700228f61cbe00327113" kindref="member">create_deprojection</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>H,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rfactor,</highlight></codeline>
-<codeline lineno="565"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numR,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numI,<sp/><ref refid="class_emp_cyl_s_l_1a686c18b7deb23a96b0608d96a7d13164" kindref="member">AxiDiskPtr</ref><sp/>func);</highlight></codeline>
-<codeline lineno="566"><highlight class="normal"></highlight></codeline>
-<codeline lineno="577" refid="class_emp_cyl_s_l_1af9d845267ad87dcffa8de0ed18375a32" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1af9d845267ad87dcffa8de0ed18375a32" kindref="member">generate_eof</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numr,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nump,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numt,</highlight></codeline>
-<codeline lineno="578"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)&gt;<sp/>f);</highlight></codeline>
-<codeline lineno="579"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="581" refid="class_emp_cyl_s_l_1a35462b138d3301822560e2c42bd88751" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a35462b138d3301822560e2c42bd88751" kindref="member">get_all</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e2a9a9df575f2d593769c1a7eccf1f8" kindref="member">r</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="582"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/><ref refid="class_emp_cyl_s_l_1a1224b24b83979fb27ddfc1bd4aecc29e" kindref="member">d</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>fr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>fz,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>fp);</highlight></codeline>
-<codeline lineno="583"><highlight class="normal"></highlight></codeline>
-<codeline lineno="585" refid="class_emp_cyl_s_l_1a2e5a9690880a05b37e253a3802a394b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a2e5a9690880a05b37e253a3802a394b6" kindref="member">setup_accumulation</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>toplev=0);</highlight></codeline>
-<codeline lineno="586"><highlight class="normal"></highlight></codeline>
-<codeline lineno="588" refid="class_emp_cyl_s_l_1af49dd0104d532aabb4f6a3524dabdb40" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1af49dd0104d532aabb4f6a3524dabdb40" kindref="member">setSampT</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N)<sp/>{<sp/><ref refid="class_emp_cyl_s_l_1a0372fb0957caf5a86e74d4f594bff96f" kindref="member">defSampT</ref><sp/>=<sp/>N;<sp/>}</highlight></codeline>
-<codeline lineno="589"><highlight class="normal"></highlight></codeline>
-<codeline lineno="591" refid="class_emp_cyl_s_l_1a19d1760036463f6711b552a88cee6b86" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a19d1760036463f6711b552a88cee6b86" kindref="member">setup_table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="592"><highlight class="normal"></highlight></codeline>
-<codeline lineno="594" refid="class_emp_cyl_s_l_1a746e4c31c3497ecafd96f556e2bf9447" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a746e4c31c3497ecafd96f556e2bf9447" kindref="member">setup_eof</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="595"><highlight class="normal"></highlight></codeline>
-<codeline lineno="597" refid="class_emp_cyl_s_l_1af25d5815c173d7cb6337488775802db2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1af25d5815c173d7cb6337488775802db2" kindref="member">reset_mass</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="599"></codeline>
-<codeline lineno="601"></codeline>
-<codeline lineno="602"><highlight class="normal"></highlight></codeline>
-<codeline lineno="603" refid="class_emp_cyl_s_l_1a6401232ca5ea7a376c5b303e9eb56a00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a6401232ca5ea7a376c5b303e9eb56a00" kindref="member">make_coefficients</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="604"><highlight class="normal"></highlight></codeline>
-<codeline lineno="606" refid="class_emp_cyl_s_l_1a69b730b34f2ced6288bb2d05a815b626" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a69b730b34f2ced6288bb2d05a815b626" kindref="member">make_coefficients</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>mlevel,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="607"><highlight class="normal"></highlight></codeline>
-<codeline lineno="609" refid="class_emp_cyl_s_l_1aa6fc95bb8a5ab07336365777c4c86f2b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aa6fc95bb8a5ab07336365777c4c86f2b" kindref="member">make_eof</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="610"><highlight class="normal"></highlight></codeline>
-<codeline lineno="612" refid="class_emp_cyl_s_l_1a657091ee7e0834ad0eda16a278272f0f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a657091ee7e0834ad0eda16a278272f0f" kindref="member">pca_hall</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>subsamp);</highlight></codeline>
-<codeline lineno="613"><highlight class="normal"></highlight></codeline>
-<codeline lineno="615" refid="class_emp_cyl_s_l_1aaa2e4007e2a54759b910932321cdcc27" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aaa2e4007e2a54759b910932321cdcc27" kindref="member">getMinSNR</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ae664cf3f67ea55849aabfc0bc24b454c" kindref="member">minSNR</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="616"><highlight class="normal"></highlight></codeline>
-<codeline lineno="618" refid="class_emp_cyl_s_l_1aa99910aeac9bd0bcc43b35092a18a9f7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aa99910aeac9bd0bcc43b35092a18a9f7" kindref="member">getMaxSNR</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a62306d9b0778b965f9934adccdcd4bb7" kindref="member">maxSNR</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="619"><highlight class="normal"></highlight></codeline>
-<codeline lineno="621" refid="class_emp_cyl_s_l_1a010b121e9d91a34a9698e670b6bbb7bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a010b121e9d91a34a9698e670b6bbb7bc" kindref="member">coefs_made_all</ref>()<sp/></highlight></codeline>
-<codeline lineno="622"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="623"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>=0;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>&lt;=multistep;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>++)<sp/></highlight></codeline>
-<codeline lineno="624"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_emp_cyl_s_l_1af20a77b1f4fd2c8e813d98711460e695" kindref="member">coefs_made</ref>[<ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>])<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="625"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="626"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="628"></codeline>
-<codeline lineno="630" refid="class_emp_cyl_s_l_1a1090e03956ae9472f3e706155b236a91" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a1090e03956ae9472f3e706155b236a91" kindref="member">init_pca</ref>();</highlight></codeline>
-<codeline lineno="631"><highlight class="normal"></highlight></codeline>
-<codeline lineno="633" refid="class_emp_cyl_s_l_1a2b600702935611bdd72f5c7c7094fc53" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a2b600702935611bdd72f5c7c7094fc53" kindref="member">determine_coefficients</ref>()<sp/>{};</highlight></codeline>
-<codeline lineno="634"><highlight class="normal"></highlight></codeline>
-<codeline lineno="636" refid="class_emp_cyl_s_l_1af4346551a09d18530b7cd80cec281110" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1af4346551a09d18530b7cd80cec281110" kindref="member">determine_acceleration_and_potential</ref>()<sp/>{};</highlight></codeline>
-<codeline lineno="637"><highlight class="normal"></highlight></codeline>
-<codeline lineno="639" refid="class_emp_cyl_s_l_1a247309c8de363bdacd60769343ca5a54" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a247309c8de363bdacd60769343ca5a54" kindref="member">accumulate</ref>(vector&lt;Particle&gt;&amp;<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlev=0,</highlight></codeline>
-<codeline lineno="640"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="641"><highlight class="normal"></highlight></codeline>
-<codeline lineno="644" refid="class_emp_cyl_s_l_1a2eca026c8c9a47db68dde26ff99ca5e1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a2eca026c8c9a47db68dde26ff99ca5e1" kindref="member">accumulate_thread</ref>(vector&lt;Particle&gt;&amp;<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlev=0,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="645"><highlight class="normal"></highlight></codeline>
-<codeline lineno="647" refid="class_emp_cyl_s_l_1ab7e13975e0b5e76a90d62b8173b2fd3a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ab7e13975e0b5e76a90d62b8173b2fd3a" kindref="member">accumulate_eof</ref>(vector&lt;Particle&gt;&amp;<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="648"><highlight class="normal"></highlight></codeline>
-<codeline lineno="651" refid="class_emp_cyl_s_l_1a315b273faa77c0ce4a0d8470af77c31d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a315b273faa77c0ce4a0d8470af77c31d" kindref="member">accumulate_eof_thread</ref>(vector&lt;Particle&gt;&amp;<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="652"><highlight class="normal"></highlight></codeline>
-<codeline lineno="654" refid="class_emp_cyl_s_l_1a29c9054e96a255d4fba26ad01b79f553" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a29c9054e96a255d4fba26ad01b79f553" kindref="member">accumulate</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e2a9a9df575f2d593769c1a7eccf1f8" kindref="member">r</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass,</highlight></codeline>
-<codeline lineno="655"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/>seq,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlev=0,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="656"><highlight class="normal"></highlight></codeline>
-<codeline lineno="658" refid="class_emp_cyl_s_l_1a922d558463e3dd98e3d1bba0b193797c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a922d558463e3dd98e3d1bba0b193797c" kindref="member">accumulate_eof</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e2a9a9df575f2d593769c1a7eccf1f8" kindref="member">r</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlev=0);</highlight></codeline>
-<codeline lineno="659"><highlight class="normal"></highlight></codeline>
-<codeline lineno="660"><highlight class="normal"></highlight></codeline>
-<codeline lineno="662" refid="class_emp_cyl_s_l_1a7f7f8c1328be01fbcfd2257ec617dae6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7f7f8c1328be01fbcfd2257ec617dae6" kindref="member">accumulated_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e2a9a9df575f2d593769c1a7eccf1f8" kindref="member">r</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>p0,</highlight></codeline>
-<codeline lineno="663"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>fr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>fz,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>fp);</highlight></codeline>
-<codeline lineno="664"><highlight class="normal"></highlight></codeline>
-<codeline lineno="666" refid="class_emp_cyl_s_l_1ae17f2940466adeeab60415fbb9a0a903" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ae17f2940466adeeab60415fbb9a0a903" kindref="member">accumulated_dens_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e2a9a9df575f2d593769c1a7eccf1f8" kindref="member">r</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>d0);</highlight></codeline>
-<codeline lineno="667"><highlight class="normal"></highlight></codeline>
-<codeline lineno="669" refid="class_emp_cyl_s_l_1a18e0d78655361a9a734ad2e6df769d4d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a18e0d78655361a9a734ad2e6df769d4d" kindref="member">accumulated_midplane_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e2a9a9df575f2d593769c1a7eccf1f8" kindref="member">r</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>num=40);</highlight></codeline>
-<codeline lineno="670"><highlight class="normal"></highlight></codeline>
-<codeline lineno="677" refid="class_emp_cyl_s_l_1acc5d0898ab7cea4df7f5dddeea9adcba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1acc5d0898ab7cea4df7f5dddeea9adcba" kindref="member">set_coefs</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mm,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>cos1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>sin1,</highlight></codeline>
-<codeline lineno="678"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>zero=</highlight><highlight class="keyword">true</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="679"><highlight class="normal"></highlight></codeline>
-<codeline lineno="681" refid="class_emp_cyl_s_l_1a3ccfb9016b0b7b7d508d77cf9d0ef25e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a3ccfb9016b0b7b7d508d77cf9d0ef25e" kindref="member">set_coefs</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mm,</highlight></codeline>
-<codeline lineno="682"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;&amp;<sp/>cos1,</highlight></codeline>
-<codeline lineno="683"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;&amp;<sp/>sin1,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>zero=</highlight><highlight class="keyword">true</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="684"><highlight class="normal"></highlight></codeline>
-<codeline lineno="686" refid="class_emp_cyl_s_l_1adb2fa176ce9aad23f30408140174cbc1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1adb2fa176ce9aad23f30408140174cbc1" kindref="member">get_coefs</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mm,<sp/>Eigen::VectorXd&amp;<sp/>cos1,<sp/>Eigen::VectorXd&amp;<sp/>sin1);</highlight></codeline>
-<codeline lineno="687"><highlight class="normal"></highlight></codeline>
-<codeline lineno="689" refid="class_emp_cyl_s_l_1aefdce8f742d10ee3833b9f57ac125d94" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aefdce8f742d10ee3833b9f57ac125d94" kindref="member">get_coefs</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mm,</highlight></codeline>
-<codeline lineno="690"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;&amp;<sp/>cos1,</highlight></codeline>
-<codeline lineno="691"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;&amp;<sp/>sin1);</highlight></codeline>
-<codeline lineno="692"><highlight class="normal"></highlight></codeline>
-<codeline lineno="694" refid="class_emp_cyl_s_l_1a4781146b6d532a885eac87681b5ba419" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a4781146b6d532a885eac87681b5ba419" kindref="member">set_mass</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass)<sp/>{</highlight></codeline>
-<codeline lineno="695"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a65e2efdbf4893d31dfc6e466739133c7" kindref="member">cylmass_made</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="696"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1ac5b718c98b51ee729a87c4e4d3add432" kindref="member">cylmass</ref><sp/>=<sp/>mass;</highlight></codeline>
-<codeline lineno="697"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="698"><highlight class="normal"></highlight></codeline>
-<codeline lineno="700" refid="class_emp_cyl_s_l_1a667aeb1e86302010a4d0d9207e9b24fb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a667aeb1e86302010a4d0d9207e9b24fb" kindref="member">dump_coefs</ref>(std::ostream&amp;<sp/>out);</highlight></codeline>
-<codeline lineno="701"><highlight class="normal"></highlight></codeline>
-<codeline lineno="703" refid="class_emp_cyl_s_l_1aa3d995b136f2f8c713c3551dd14577a0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aa3d995b136f2f8c713c3551dd14577a0" kindref="member">dump_coefs_binary</ref>(std::ostream&amp;<sp/>out,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>time);</highlight></codeline>
-<codeline lineno="704"><highlight class="normal"></highlight></codeline>
-<codeline lineno="706" refid="class_emp_cyl_s_l_1a6fbec197b1432a4ba8b565b613953add" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a6fbec197b1432a4ba8b565b613953add" kindref="member">dump_basis</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>step,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rmax=-1.0);</highlight></codeline>
-<codeline lineno="707"><highlight class="normal"></highlight></codeline>
-<codeline lineno="709" refid="class_emp_cyl_s_l_1a0e97a59d8de16ea6ed7059406a4dc4e2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e97a59d8de16ea6ed7059406a4dc4e2" kindref="member">dump_images</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>OUTFILE,</highlight></codeline>
-<codeline lineno="710"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>XYOUT,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ZOUT,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>OUTR,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>OUTZ,</highlight></codeline>
-<codeline lineno="711"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>logscale);</highlight></codeline>
-<codeline lineno="712"><highlight class="normal"></highlight></codeline>
-<codeline lineno="714" refid="class_emp_cyl_s_l_1af268662f8998695185625f734f028a71" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1af268662f8998695185625f734f028a71" kindref="member">dump_images_basis</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>OUTFILE,</highlight></codeline>
-<codeline lineno="715"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>XYOUT,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ZOUT,<sp/></highlight></codeline>
-<codeline lineno="716"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>OUTR,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>OUTZ,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>logscale,</highlight></codeline>
-<codeline lineno="717"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M1,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M2,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N1,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N2);</highlight></codeline>
-<codeline lineno="718"><highlight class="normal"></highlight></codeline>
-<codeline lineno="720" refid="class_emp_cyl_s_l_1a2f3e7464c373fa3c9d0a782b1e2187ff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a2f3e7464c373fa3c9d0a782b1e2187ff" kindref="member">dump_images_basis_pca</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>runtag,</highlight></codeline>
-<codeline lineno="721"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>XYOUT,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ZOUT,<sp/></highlight></codeline>
-<codeline lineno="722"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>OUTR,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>OUTZ,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cnt);</highlight></codeline>
-<codeline lineno="723"><highlight class="normal"></highlight></codeline>
-<codeline lineno="725" refid="class_emp_cyl_s_l_1a85056f370f790a6f05c38319d5e407ff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a85056f370f790a6f05c38319d5e407ff" kindref="member">dump_images_basis_eof</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>runtag,</highlight></codeline>
-<codeline lineno="726"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>XYOUT,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ZOUT,<sp/></highlight></codeline>
-<codeline lineno="727"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>OUTR,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>OUTZ,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cnt,</highlight></codeline>
-<codeline lineno="728"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>tp);</highlight></codeline>
-<codeline lineno="729"><highlight class="normal"></highlight></codeline>
-<codeline lineno="731" refid="class_emp_cyl_s_l_1a0405d6102726bae6b522efd162ff8d4e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0405d6102726bae6b522efd162ff8d4e" kindref="member">compare_basis</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref><sp/>*<ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>);</highlight></codeline>
-<codeline lineno="732"><highlight class="normal"></highlight></codeline>
-<codeline lineno="734" refid="class_emp_cyl_s_l_1a6bf83f8f0c4c7e94dc46b2d86ae48295" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a6bf83f8f0c4c7e94dc46b2d86ae48295" kindref="member">restrict_order</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="735"><highlight class="normal"></highlight></codeline>
-<codeline lineno="737"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>@{</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="738"><highlight class="normal"></highlight></codeline>
-<codeline lineno="740" refid="class_emp_cyl_s_l_1ad58896052cd458e7f8c6a69a84a0b061" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ad58896052cd458e7f8c6a69a84a0b061" kindref="member">legendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::MatrixXd&amp;<sp/><ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>);</highlight></codeline>
-<codeline lineno="743" refid="class_emp_cyl_s_l_1a02a79620604c800c332acda6b041447f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a02a79620604c800c332acda6b041447f" kindref="member">dlegendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::MatrixXd<sp/>&amp;<ref refid="class_emp_cyl_s_l_1a4677a8c8d6acc5d29e18961267a37637" kindref="member">p</ref>,<sp/>Eigen::MatrixXd<sp/>&amp;dp);</highlight></codeline>
-<codeline lineno="745" refid="class_emp_cyl_s_l_1ad4393e20f35ceecb752b3fa6a014bcb0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ad4393e20f35ceecb752b3fa6a014bcb0" kindref="member">sinecosine_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,<sp/>Eigen::VectorXd&amp;<sp/>c,<sp/>Eigen::VectorXd&amp;<sp/>s);</highlight></codeline>
-<codeline lineno="746"><highlight class="normal"></highlight></codeline>
-<codeline lineno="747"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>@}</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="748"><highlight class="normal"></highlight></codeline>
-<codeline lineno="750" refid="class_emp_cyl_s_l_1a40fe0cc482bea73f3393f5162d391e2c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a40fe0cc482bea73f3393f5162d391e2c" kindref="member">xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="751"><highlight class="normal"></highlight></codeline>
-<codeline lineno="753" refid="class_emp_cyl_s_l_1a900f4ad76eb155da9a21e483393c30db" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a900f4ad76eb155da9a21e483393c30db" kindref="member">r_to_xi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="754"><highlight class="normal"></highlight></codeline>
-<codeline lineno="756" refid="class_emp_cyl_s_l_1a0e10a3d34155f376150a0ece8a85acbb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0e10a3d34155f376150a0ece8a85acbb" kindref="member">d_xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="757"><highlight class="normal"></highlight></codeline>
-<codeline lineno="759" refid="class_emp_cyl_s_l_1a17510668f28e08910262d470b7e1c36b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a17510668f28e08910262d470b7e1c36b" kindref="member">get_ascale</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a63fbc7a58c18306cf8ff7b9cd1f1acd7" kindref="member">ASCALE</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="760"><highlight class="normal"></highlight></codeline>
-<codeline lineno="762" refid="class_emp_cyl_s_l_1ad9ab639d87404f5410b8136fa75a2873" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ad9ab639d87404f5410b8136fa75a2873" kindref="member">get_hscale</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aafceeb0f77f53e1eb2fafc9ac8d1ddc9" kindref="member">HSCALE</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="763"><highlight class="normal"></highlight></codeline>
-<codeline lineno="765" refid="class_emp_cyl_s_l_1ad1a0ddf3cf580d8c4d688d1232e5d3ad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1ad1a0ddf3cf580d8c4d688d1232e5d3ad" kindref="member">get_rtable</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a6627c10537857cd1da90c8935bba8beb" kindref="member">Rtable</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="766"><highlight class="normal"></highlight></codeline>
-<codeline lineno="768" refid="class_emp_cyl_s_l_1a9488ca326d3fa636bd807f5caf55d2b5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a9488ca326d3fa636bd807f5caf55d2b5" kindref="member">setEven</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>even=</highlight><highlight class="keyword">true</highlight><highlight class="normal">)<sp/>{<sp/><ref refid="class_emp_cyl_s_l_1a0becb34528efb75dd76d60b4a02084d8" kindref="member">EVEN_M</ref><sp/>=<sp/>even;<sp/>}</highlight></codeline>
-<codeline lineno="769"><highlight class="normal"></highlight></codeline>
-<codeline lineno="772" refid="class_emp_cyl_s_l_1a7f48386e3f921bde7ec151270ec78650" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7f48386e3f921bde7ec151270ec78650" kindref="member">setHall</ref>(std::string<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>tot)</highlight></codeline>
-<codeline lineno="773"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="774"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a32cdbad0071825e02d2f697ca4aedf4b" kindref="member">hallfile</ref><sp/>=<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>;</highlight></codeline>
-<codeline lineno="775"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a1966b7be886e21c19de9945e84cf1996" kindref="member">nbodstot</ref><sp/>=<sp/>tot;</highlight></codeline>
-<codeline lineno="776"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="777"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a1090e03956ae9472f3e706155b236a91" kindref="member">init_pca</ref>();</highlight></codeline>
-<codeline lineno="778"><highlight class="normal"></highlight></codeline>
-<codeline lineno="779"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)<sp/>{</highlight></codeline>
-<codeline lineno="780"><highlight class="normal"></highlight></codeline>
-<codeline lineno="781"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl_s_l_1a7421fd16b5bc2b716abdadeb2ee4fbda" kindref="member">PCAVAR</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="782"><highlight class="normal"></highlight></codeline>
-<codeline lineno="783"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>types[]<sp/>=</highlight></codeline>
-<codeline lineno="784"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="785"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Hall&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="786"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Truncate&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="787"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;None&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="788"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="789"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="790"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>desc[]<sp/>=</highlight></codeline>
-<codeline lineno="791"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="792"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Compute<sp/>the<sp/>S/N<sp/>but<sp/>do<sp/>not<sp/>modify<sp/>coefficients&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="793"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Tapered<sp/>signal-to-noise<sp/>power<sp/>defined<sp/>by<sp/>Hall&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="794"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Compute<sp/>the<sp/>S/N<sp/>but<sp/>do<sp/>not<sp/>modify<sp/>coefficients&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="795"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="796"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="797"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;EmpCylSL:<sp/>using<sp/>PCA<sp/>type:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>types[<ref refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" kindref="member">tk_type</ref>]</highlight></codeline>
-<codeline lineno="798"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;====&gt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>desc[<ref refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" kindref="member">tk_type</ref>]<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="799"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="800"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl_s_l_1ad1c941f70ba409b1267a5c602192a06f" kindref="member">PCAEOF</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="801"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;EmpCylSL:<sp/>using<sp/>PCA<sp/>EOF&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="802"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="803"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="804"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="805"><highlight class="normal"></highlight></codeline>
-<codeline lineno="808"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::map&lt;std::string,<sp/>std::string&gt;</highlight></codeline>
-<codeline lineno="809" refid="class_emp_cyl_s_l_1a862b82f17985a1002130ea7d735f3210" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1a862b82f17985a1002130ea7d735f3210" kindref="member">cacheInfo</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="class_emp_cyl_s_l_1ab771f6442cb98992024f528d9711004e" kindref="member">cachefile</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">true</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="810"><highlight class="normal"></highlight></codeline>
-<codeline lineno="812"><highlight class="normal"></highlight></codeline>
-<codeline lineno="813" refid="class_emp_cyl_s_l_1a0671042c6008017bd136991f272894b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a0671042c6008017bd136991f272894b8" kindref="member">getPotSC</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>pC,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>pS);</highlight></codeline>
-<codeline lineno="814"><highlight class="normal"></highlight></codeline>
-<codeline lineno="816" refid="class_emp_cyl_s_l_1aae847e6f397b305dcd301ad7966a7923" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aae847e6f397b305dcd301ad7966a7923" kindref="member">getDensSC</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dC,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dS);</highlight></codeline>
-<codeline lineno="817"><highlight class="normal"></highlight></codeline>
-<codeline lineno="818" refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/>=<sp/>std::vector&lt;Eigen::MatrixXd&gt;;</highlight></codeline>
-<codeline lineno="819"><highlight class="normal"></highlight></codeline>
-<codeline lineno="822" refid="class_emp_cyl_s_l_1adc57fe7deeda26444f065e444814b105" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/><ref refid="class_emp_cyl_s_l_1adc57fe7deeda26444f065e444814b105" kindref="member">getDensC</ref>()</highlight></codeline>
-<codeline lineno="823"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="824"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/>ret((<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>+1)*<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>);</highlight></codeline>
-<codeline lineno="825"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>=0;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>&lt;=<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>++)<sp/>{</highlight></codeline>
-<codeline lineno="826"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n=0;<sp/>n&lt;<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>;<sp/>n++)<sp/>{</highlight></codeline>
-<codeline lineno="827"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal"><sp/>=<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>*<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>+n;</highlight></codeline>
-<codeline lineno="828"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[id].resize(<ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>+1,<sp/><ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>+1);</highlight></codeline>
-<codeline lineno="829"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;=<ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>;<sp/>i++)</highlight></codeline>
-<codeline lineno="830"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;=<ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>;<sp/>j++)</highlight></codeline>
-<codeline lineno="831"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[</highlight><highlight class="keywordtype">id</highlight><highlight class="normal">](i,<sp/>j)<sp/>=<sp/><ref refid="class_emp_cyl_s_l_1a7e56db72abcf0d0eec07f15eb2376032" kindref="member">densC</ref>[<ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>][n](i,<sp/>j);</highlight></codeline>
-<codeline lineno="832"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="833"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="834"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="835"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="836"><highlight class="normal"></highlight></codeline>
-<codeline lineno="837" refid="class_emp_cyl_s_l_1a99e22052f40b08a7a87f8ff89541cf45" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/><ref refid="class_emp_cyl_s_l_1a99e22052f40b08a7a87f8ff89541cf45" kindref="member">getDensS</ref>()</highlight></codeline>
-<codeline lineno="838"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="839"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/>ret((<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>+1)*<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>);</highlight></codeline>
-<codeline lineno="840"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>=1;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>&lt;=<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>++)<sp/>{</highlight></codeline>
-<codeline lineno="841"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n=0;<sp/>n&lt;<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>;<sp/>n++)<sp/>{</highlight></codeline>
-<codeline lineno="842"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal"><sp/>=<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>*<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>+n;</highlight></codeline>
-<codeline lineno="843"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[id].resize(<ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>+1,<sp/><ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>+1);</highlight></codeline>
-<codeline lineno="844"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;=<ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>;<sp/>i++)</highlight></codeline>
-<codeline lineno="845"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;=<ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>;<sp/>j++)</highlight></codeline>
-<codeline lineno="846"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[</highlight><highlight class="keywordtype">id</highlight><highlight class="normal">](i,<sp/>j)<sp/>=<sp/><ref refid="class_emp_cyl_s_l_1ae05a132072a42c08fdfbac5cdd4117b0" kindref="member">densS</ref>[<ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>][n](i,<sp/>j);</highlight></codeline>
-<codeline lineno="847"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="848"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="849"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="850"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="851"><highlight class="normal"></highlight></codeline>
-<codeline lineno="853" refid="class_emp_cyl_s_l_1a733b36fdc7a0bb9b6b57f067eb75d925" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/><ref refid="class_emp_cyl_s_l_1a733b36fdc7a0bb9b6b57f067eb75d925" kindref="member">getPotlC</ref>()</highlight></codeline>
-<codeline lineno="854"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="855"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/>ret((<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>+1)*<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>);</highlight></codeline>
-<codeline lineno="856"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>=0;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>&lt;=<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>++)<sp/>{</highlight></codeline>
-<codeline lineno="857"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n=0;<sp/>n&lt;<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>;<sp/>n++)<sp/>{</highlight></codeline>
-<codeline lineno="858"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal"><sp/>=<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>*<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref><sp/>+<sp/>n;</highlight></codeline>
-<codeline lineno="859"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[id].resize(<ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>+1,<sp/><ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>+1);</highlight></codeline>
-<codeline lineno="860"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;=<ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>;<sp/>i++)</highlight></codeline>
-<codeline lineno="861"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;=<ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>;<sp/>j++)</highlight></codeline>
-<codeline lineno="862"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[</highlight><highlight class="keywordtype">id</highlight><highlight class="normal">](i,<sp/>j)<sp/>=<sp/><ref refid="class_emp_cyl_s_l_1abf856ef4ab862213fcc5b4accb5f135a" kindref="member">potC</ref>[<ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>][n](i,<sp/>j);</highlight></codeline>
-<codeline lineno="863"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="864"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="865"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="866"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="867"><highlight class="normal"></highlight></codeline>
-<codeline lineno="868" refid="class_emp_cyl_s_l_1abca06e6140ca55efa1162089b8346b68" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/><ref refid="class_emp_cyl_s_l_1abca06e6140ca55efa1162089b8346b68" kindref="member">getPotlS</ref>()</highlight></codeline>
-<codeline lineno="869"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="870"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref><sp/>ret((<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>+1)*<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>);</highlight></codeline>
-<codeline lineno="871"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>=1;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>&lt;=<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>;<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>++)<sp/>{</highlight></codeline>
-<codeline lineno="872"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n=0;<sp/>n&lt;<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref>;<sp/>n++)<sp/>{</highlight></codeline>
-<codeline lineno="873"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal"><sp/>=<sp/><ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>*<ref refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" kindref="member">NORDER</ref><sp/>+<sp/>n;</highlight></codeline>
-<codeline lineno="874"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[id].resize(<ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>+1,<sp/><ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>+1);</highlight></codeline>
-<codeline lineno="875"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;=<ref refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" kindref="member">NUMX</ref>;<sp/>i++)</highlight></codeline>
-<codeline lineno="876"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;=<ref refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" kindref="member">NUMY</ref>;<sp/>j++)</highlight></codeline>
-<codeline lineno="877"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[</highlight><highlight class="keywordtype">id</highlight><highlight class="normal">](i,<sp/>j)<sp/>=<sp/><ref refid="class_emp_cyl_s_l_1a80294caadb34d5e85752bed0f85b2b42" kindref="member">potS</ref>[<ref refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" kindref="member">M</ref>][n](i,<sp/>j);</highlight></codeline>
-<codeline lineno="878"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="879"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="880"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="881"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="882"><highlight class="normal"></highlight></codeline>
-<codeline lineno="883"><highlight class="normal"></highlight></codeline>
-<codeline lineno="884" refid="class_emp_cyl_s_l_1a3506d9e2af85bad3fbaa6d4322445139" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a3506d9e2af85bad3fbaa6d4322445139" kindref="member">getPotParticle</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="885"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a72d8726715739ecffdfe29e5c8569cbc" kindref="member">ContribArray</ref>&amp;<sp/><ref refid="class_emp_cyl_s_l_1a554140e8382732014abb3e95f8c54f91" kindref="member">vc</ref>,<sp/><ref refid="class_emp_cyl_s_l_1a72d8726715739ecffdfe29e5c8569cbc" kindref="member">ContribArray</ref>&amp;<sp/><ref refid="class_emp_cyl_s_l_1a67a63f563459749ff1d353c9debce1ad" kindref="member">vs</ref>);</highlight></codeline>
-<codeline lineno="886"><highlight class="normal"></highlight></codeline>
-<codeline lineno="888" refid="class_emp_cyl_s_l_1a1f6cc889a40ff0168ee43b4d139b7e8f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a1f6cc889a40ff0168ee43b4d139b7e8f" kindref="member">get_trimmed</ref></highlight></codeline>
-<codeline lineno="889"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>snr,</highlight></codeline>
-<codeline lineno="890"><highlight class="normal"><sp/><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;&amp;<sp/>ac_cos,<sp/><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;&amp;<sp/>ac_sin,</highlight></codeline>
-<codeline lineno="891"><highlight class="normal"><sp/><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;*<sp/>rt_cos=0,<sp/>std::vector&lt;Eigen::VectorXd&gt;*<sp/>rt_sin=0,</highlight></codeline>
-<codeline lineno="892"><highlight class="normal"><sp/><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;*<sp/>sn_rat=0);</highlight></codeline>
-<codeline lineno="893"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="895" refid="class_emp_cyl_s_l_1a27cd8d9869bfdbb710e28925664f2289" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a27cd8d9869bfdbb710e28925664f2289" kindref="member">set_trimmed</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>snr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rem);</highlight></codeline>
-<codeline lineno="896"><highlight class="normal"></highlight></codeline>
-<codeline lineno="898" refid="class_emp_cyl_s_l_1a9a192aad1ace6a1bc46cb96e7ae13ec2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a9a192aad1ace6a1bc46cb96e7ae13ec2" kindref="member">setTotal</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>tot)<sp/>{</highlight></codeline>
-<codeline lineno="899"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a1966b7be886e21c19de9945e84cf1996" kindref="member">nbodstot</ref><sp/>=<sp/>tot;</highlight></codeline>
-<codeline lineno="900"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="901"><highlight class="normal"></highlight></codeline>
-<codeline lineno="902" refid="class_emp_cyl_s_l_1a2452105272021c3c33064981587c1184" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a2452105272021c3c33064981587c1184" kindref="member">setTK</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>tk)</highlight></codeline>
-<codeline lineno="903"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="904"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>(tk<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;Hall&quot;</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" kindref="member">tk_type</ref><sp/>=<sp/><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793afab918d81116908252f64b5c7e2eaa99" kindref="member">Hall</ref>;</highlight></codeline>
-<codeline lineno="905"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tk<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;Truncate&quot;</highlight><highlight class="normal">)<sp/><ref refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" kindref="member">tk_type</ref><sp/>=<sp/><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793aaef8f7277ef603757d44900f96e17d67" kindref="member">Truncate</ref>;</highlight></codeline>
-<codeline lineno="906"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tk<sp/>==<sp/></highlight><highlight class="stringliteral">&quot;None&quot;</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><ref refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" kindref="member">tk_type</ref><sp/>=<sp/><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793a955b9c65bb82613a6ed0a36482bfbded" kindref="member">None</ref>;</highlight></codeline>
-<codeline lineno="907"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="908"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)<sp/>{</highlight></codeline>
-<codeline lineno="909"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;EmpCylSL:<sp/>no<sp/>such<sp/>TK<sp/>type<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>tk<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="910"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>using<sp/>None<sp/>type\n&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="911"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="912"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="913"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="914"><highlight class="normal"></highlight></codeline>
-<codeline lineno="915" refid="class_emp_cyl_s_l_1ae0476e0a062bbdafcb8a953545e12ac1" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_emp_cyl_s_l_1ae0476e0a062bbdafcb8a953545e12ac1" kindref="member">sanity</ref>()<sp/>{<sp/></highlight></codeline>
-<codeline lineno="916"><highlight class="normal"><sp/><sp/><sp/><sp/>vector&lt;double&gt;<sp/>ret;</highlight></codeline>
-<codeline lineno="917"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>=0;<sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>&lt;=<ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>;<sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>++)<sp/>ret.push_back(<ref refid="class_emp_cyl_s_l_1aa73f0cb40abc6958380212b49e620302" kindref="member">accum_cos</ref>[0][<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>]);</highlight></codeline>
-<codeline lineno="918"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="919"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="920"><highlight class="normal"></highlight></codeline>
-<codeline lineno="922" refid="class_emp_cyl_s_l_1a588dfcebda9ba2b17021345f5966be63" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a588dfcebda9ba2b17021345f5966be63" kindref="member">ortho_check</ref>(std::ostream&amp;<sp/>out);</highlight></codeline>
-<codeline lineno="923"><highlight class="normal"></highlight></codeline>
-<codeline lineno="925" refid="class_emp_cyl_s_l_1af728339f3ca3414a24893217f2f350af" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_emp_cyl_s_l_1af728339f3ca3414a24893217f2f350af" kindref="member">orthoCheck</ref>();</highlight></codeline>
-<codeline lineno="926"><highlight class="normal"></highlight></codeline>
-<codeline lineno="927"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="928"><highlight class="normal"><sp/><sp/>cudaMappingConstants<sp/>getCudaMappingConstants();</highlight></codeline>
-<codeline lineno="929"><highlight class="normal"></highlight></codeline>
-<codeline lineno="930"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>(std::vector&lt;cudaArray_t&gt;&amp;<sp/>cuArray,</highlight></codeline>
-<codeline lineno="931"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thrust::host_vector&lt;cudaTextureObject_t&gt;&amp;<sp/>tex);</highlight></codeline>
-<codeline lineno="932"><highlight class="normal"></highlight></codeline>
-<codeline lineno="933"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>get_coef(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>c)</highlight></codeline>
-<codeline lineno="934"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="935"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref><sp/>&gt;<sp/><sp/><ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>)</highlight></codeline>
-<codeline lineno="936"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="937"><highlight class="normal"></highlight></codeline>
-<codeline lineno="938"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a83e9d2f440817e5be5c52e8870011a04" kindref="member">rank3</ref>)</highlight></codeline>
-<codeline lineno="939"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;=norder&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="940"><highlight class="normal"></highlight></codeline>
-<codeline lineno="941"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(c<sp/>==<sp/></highlight><highlight class="charliteral">&apos;c&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="942"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aa73f0cb40abc6958380212b49e620302" kindref="member">accum_cos</ref>[<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>][n];</highlight></codeline>
-<codeline lineno="943"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="944"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7a9a5f30a82f1540107d6e5c0dcb3ccd" kindref="member">accum_sin</ref>[<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>][n];</highlight></codeline>
-<codeline lineno="945"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="946"><highlight class="normal"></highlight></codeline>
-<codeline lineno="947"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_coef(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlevel,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>c)</highlight></codeline>
-<codeline lineno="948"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="949"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref><sp/>&gt;<sp/><sp/><ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>)</highlight></codeline>
-<codeline lineno="950"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="951"><highlight class="normal"></highlight></codeline>
-<codeline lineno="952"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a83e9d2f440817e5be5c52e8870011a04" kindref="member">rank3</ref>)</highlight></codeline>
-<codeline lineno="953"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;=norder&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="954"><highlight class="normal"></highlight></codeline>
-<codeline lineno="955"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(c<sp/>==<sp/></highlight><highlight class="charliteral">&apos;c&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="956"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1aa21c6a9576dc5d76cba066a238b94409" kindref="member">cosN</ref>(mlevel)[0][<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>][n];</highlight></codeline>
-<codeline lineno="957"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="958"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a82b0d7db830198f6a65ec6548bebc789" kindref="member">sinN</ref>(mlevel)[0][<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>][n];</highlight></codeline>
-<codeline lineno="959"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="960"><highlight class="normal"></highlight></codeline>
-<codeline lineno="961"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_coefT(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>T,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="962"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="963"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref><sp/>&gt;<sp/><sp/><ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>)</highlight></codeline>
-<codeline lineno="964"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="965"><highlight class="normal"></highlight></codeline>
-<codeline lineno="966"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a83e9d2f440817e5be5c52e8870011a04" kindref="member">rank3</ref>)</highlight></codeline>
-<codeline lineno="967"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;=norder&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="968"><highlight class="normal"></highlight></codeline>
-<codeline lineno="969"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(T<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a7e8c6aaa07f701a510982df758e2722c" kindref="member">sampT</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="970"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="971"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;(T=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>T<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&gt;=(sampT=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_emp_cyl_s_l_1a7e8c6aaa07f701a510982df758e2722c" kindref="member">sampT</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="972"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="973"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="974"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="975"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a7b6c8bcf8ee3a9ef0c055fc98a139fd6" kindref="member">covV</ref>(0,<sp/>T,<sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>)[n];</highlight></codeline>
-<codeline lineno="976"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="977"><highlight class="normal"></highlight></codeline>
-<codeline lineno="978"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_covrT(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>T,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>o)</highlight></codeline>
-<codeline lineno="979"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="980"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref><sp/>&gt;<sp/><sp/><ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>)</highlight></codeline>
-<codeline lineno="981"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="982"><highlight class="normal"></highlight></codeline>
-<codeline lineno="983"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a83e9d2f440817e5be5c52e8870011a04" kindref="member">rank3</ref>)</highlight></codeline>
-<codeline lineno="984"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;=norder&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="985"><highlight class="normal"></highlight></codeline>
-<codeline lineno="986"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(o<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a83e9d2f440817e5be5c52e8870011a04" kindref="member">rank3</ref>)</highlight></codeline>
-<codeline lineno="987"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;o&gt;=norder&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="988"><highlight class="normal"></highlight></codeline>
-<codeline lineno="989"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(T<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a7e8c6aaa07f701a510982df758e2722c" kindref="member">sampT</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="990"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="991"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;(T=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>T<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&gt;=(sampT=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_emp_cyl_s_l_1a7e8c6aaa07f701a510982df758e2722c" kindref="member">sampT</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="992"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="993"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="994"><highlight class="normal"></highlight></codeline>
-<codeline lineno="995"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a9c0aa23a0d1b44c9c421d87b1b64a0b4" kindref="member">covM</ref>(0,<sp/>T,<sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>)(n,<sp/>o);</highlight></codeline>
-<codeline lineno="996"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="997"><highlight class="normal"></highlight></codeline>
-<codeline lineno="998"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_tvar(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j)</highlight></codeline>
-<codeline lineno="999"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1000"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref><sp/>&gt;<sp/><sp/><ref refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" kindref="member">MMAX</ref>)</highlight></codeline>
-<codeline lineno="1001"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="1002"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1003"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a83e9d2f440817e5be5c52e8870011a04" kindref="member">rank3</ref><sp/>or<sp/>j<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a83e9d2f440817e5be5c52e8870011a04" kindref="member">rank3</ref>)</highlight></codeline>
-<codeline lineno="1004"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;norder&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="1005"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1006"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a53492da2afd7c58fe5ab4264aea84007" kindref="member">tvar</ref>[0][<ref refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" kindref="member">m</ref>](i,<sp/>j);</highlight></codeline>
-<codeline lineno="1007"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1008"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1009"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_massT(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>T)</highlight></codeline>
-<codeline lineno="1010"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1011"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(T<sp/>&gt;=<sp/><ref refid="class_emp_cyl_s_l_1a7e8c6aaa07f701a510982df758e2722c" kindref="member">sampT</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="1012"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="1013"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;(T=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>T<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&gt;=(sampT=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_emp_cyl_s_l_1a7e8c6aaa07f701a510982df758e2722c" kindref="member">sampT</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1014"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="1015"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1016"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1017"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_emp_cyl_s_l_1a8e7c4e2797ecbb1df34246bd489ce330" kindref="member">massT1</ref>[0][T];</highlight></codeline>
-<codeline lineno="1018"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1019"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1020"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1021"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1022"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1023" refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793" kindref="member">TKType</ref><sp/><ref refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" kindref="member">tk_type</ref>;</highlight></codeline>
-<codeline lineno="1024"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1025"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="1026"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1027" refid="_emp_cyl_s_l_8_h_1a7ee069c575dbced5e3b1893f343a1a94" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="_emp_cyl_s_l_8_h_1a7ee069c575dbced5e3b1893f343a1a94" kindref="member">legendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::MatrixXd&amp;<sp/>p);</highlight></codeline>
-<codeline lineno="1028"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1029" refid="_emp_cyl_s_l_8_h_1ad9b1e85ed65d7efa4b66f9f23eb762a6" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="_emp_cyl_s_l_8_h_1ad9b1e85ed65d7efa4b66f9f23eb762a6" kindref="member">dlegendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,</highlight></codeline>
-<codeline lineno="1030"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd<sp/>&amp;p,<sp/>Eigen::MatrixXd&amp;<sp/>dp);</highlight></codeline>
-<codeline lineno="1031"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1032" refid="_emp_cyl_s_l_8_h_1ac3368ab88e5b782bbb3664074d103bd9" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="_emp_cyl_s_l_8_h_1ac3368ab88e5b782bbb3664074d103bd9" kindref="member">sinecosine_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="1033"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;<sp/>c,<sp/>Eigen::VectorXd&amp;<sp/>s);</highlight></codeline>
-<codeline lineno="1034"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1035" refid="_emp_cyl_s_l_8_h_1aa0ef74652fa64c2615c9ff54a5d9e8e2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;EmpCylSL&gt;<sp/><ref refid="_emp_cyl_s_l_8_h_1aa0ef74652fa64c2615c9ff54a5d9e8e2" kindref="member">EmpCylSLptr</ref>;</highlight></codeline>
-<codeline lineno="1036"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1037"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1038"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1039"><highlight class="normal"></highlight><highlight class="comment">//<sp/>-*-<sp/>C++<sp/>-*-</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1040"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_enum_bitset_8_h.xml b/doxyxml/_enum_bitset_8_h.xml
deleted file mode 100644
index a7d4394..0000000
--- a/doxyxml/_enum_bitset_8_h.xml
+++ /dev/null
@@ -1,105 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_enum_bitset_8_h" kind="file" language="C++">
-    <compoundname>EnumBitset.H</compoundname>
-    <includes local="no">bitset</includes>
-    <includes local="no">type_traits</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/EnumBitset.H</label>
-        <link refid="_enum_bitset_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>bitset</label>
-      </node>
-      <node id="3">
-        <label>type_traits</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_enum_bitset" prot="public">EnumBitset</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_EnumBitset_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_EnumBitset_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;bitset&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;type_traits&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="10" refid="struct_enum_traits" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_enum_traits" kindref="compound">EnumTraits</ref>;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="16" refid="class_enum_bitset" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_enum_bitset" kindref="compound">EnumBitset</ref></highlight></codeline>
-<codeline lineno="17"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_enum_bitset_1a36cbc7aa57a2c059e543494aeece3b2a" refkind="member"><highlight class="normal"><sp/><sp/>std::bitset&lt;static_cast&lt;typename<sp/>std::underlying_type&lt;T&gt;::type&gt;(<ref refid="struct_enum_traits" kindref="compound">EnumTraits&lt;T&gt;::max</ref>)&gt;<sp/><ref refid="class_enum_bitset_1a36cbc7aa57a2c059e543494aeece3b2a" kindref="member">s</ref>;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="class_enum_bitset_1abd171154ac6e6652ead6f2397e3588d1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::underlying_type&lt;T&gt;::type<sp/><ref refid="class_enum_bitset_1abd171154ac6e6652ead6f2397e3588d1" kindref="member">get_value</ref>(T<sp/>v)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="24"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">typename<sp/>std::underlying_type&lt;T&gt;::type</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(v);</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_enum_bitset_1a6a676cc43a11608c33d0bccef926b5b5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_enum_bitset_1a6a676cc43a11608c33d0bccef926b5b5" kindref="member">EnumBitset</ref>()<sp/>:<sp/><ref refid="class_enum_bitset_1a36cbc7aa57a2c059e543494aeece3b2a" kindref="member">s</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_enum_bitset_1aa404f760400af3e98e53ba5d0d3d4b57" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_enum_bitset_1aa404f760400af3e98e53ba5d0d3d4b57" kindref="member">test</ref>(T<sp/>pos)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="35"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_enum_bitset_1a36cbc7aa57a2c059e543494aeece3b2a" kindref="member">s</ref>.test(<ref refid="class_enum_bitset_1abd171154ac6e6652ead6f2397e3588d1" kindref="member">get_value</ref>(pos));</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_enum_bitset_1ae16c4498f32671b7fa2eaa560acbb6c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_enum_bitset_1ae16c4498f32671b7fa2eaa560acbb6c8" kindref="member">operator[]</ref>(T<sp/>pos)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="41"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_enum_bitset_1a36cbc7aa57a2c059e543494aeece3b2a" kindref="member">s</ref>.test(<ref refid="class_enum_bitset_1abd171154ac6e6652ead6f2397e3588d1" kindref="member">get_value</ref>(pos));</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
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-  </compounddef>
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diff --git a/doxyxml/_external_collection_8_h.xml b/doxyxml/_external_collection_8_h.xml
deleted file mode 100644
index ea6413f..0000000
--- a/doxyxml/_external_collection_8_h.xml
+++ /dev/null
@@ -1,552 +0,0 @@
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-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_ExternalCollection_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_component_container_8_h" kindref="compound">ComponentContainer.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_external_force_8_h" kindref="compound">ExternalForce.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
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diff --git a/doxyxml/_external_force_8_h.xml b/doxyxml/_external_force_8_h.xml
deleted file mode 100644
index c16c125..0000000
--- a/doxyxml/_external_force_8_h.xml
+++ /dev/null
@@ -1,592 +0,0 @@
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deleted file mode 100644
index 09009a9..0000000
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diff --git a/doxyxml/_find_orb_8_h.xml b/doxyxml/_find_orb_8_h.xml
deleted file mode 100644
index bac7d50..0000000
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-<codeline lineno="12"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="class_find_orb" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_find_orb" kindref="compound">FindOrb</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::function&lt;double(std::vector&lt;double&gt;&amp;)&gt;</highlight></codeline>
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-<codeline lineno="17" refid="class_find_orb_1adaf6d5d0ed3f5edae681b2cb4aee3171" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SphericalOrbit&gt;<sp/><ref refid="class_find_orb_1adaf6d5d0ed3f5edae681b2cb4aee3171" kindref="member">orb</ref>;</highlight></codeline>
-<codeline lineno="18" refid="class_find_orb_1a5c1963ffe47aa3a92a8434dffb7d2bf9" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/><sp/><sp/><sp/><ref refid="class_find_orb_1a5c1963ffe47aa3a92a8434dffb7d2bf9" kindref="member">halo_model</ref>;</highlight></codeline>
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-<codeline lineno="40"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="42" refid="class_find_orb_1a24beff1f157f81b5626869bb92f57033" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_find_orb_1a24beff1f157f81b5626869bb92f57033" kindref="member">FindOrb</ref>(std::shared_ptr&lt;AxiSymModel&gt;<sp/>mod,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>PERI,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>APO);</highlight></codeline>
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-<codeline lineno="48" refid="class_find_orb_1a02785568e04e5a1665ac5de3f7a31dce" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_orb_values" kindref="compound">OrbValues</ref><sp/><ref refid="class_find_orb_1a02785568e04e5a1665ac5de3f7a31dce" kindref="member">Anneal</ref>();</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_find_orb_1a2ee2cbd0107340d78e9e0742b77953de" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref>&amp;<sp/><ref refid="class_find_orb_1a2ee2cbd0107340d78e9e0742b77953de" kindref="member">Orb</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*<ref refid="class_find_orb_1adaf6d5d0ed3f5edae681b2cb4aee3171" kindref="member">orb</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/FindOrb.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_flat_disk_8_h.xml b/doxyxml/_flat_disk_8_h.xml
deleted file mode 100644
index cd4d85c..0000000
--- a/doxyxml/_flat_disk_8_h.xml
+++ /dev/null
@@ -1,498 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_flat_disk_8_h" kind="file" language="C++">
-    <compoundname>FlatDisk.H</compoundname>
-    <includes local="no">memory</includes>
-    <includes local="no">map</includes>
-    <includes refid="_biorth_cyl_8_h" local="no">BiorthCyl.H</includes>
-    <includes refid="_polar_basis_8_h" local="no">PolarBasis.H</includes>
-    <incdepgraph>
-      <node id="4">
-        <label>BiorthCyl.H</label>
-        <link refid="_biorth_cyl_8_h"/>
-        <childnode refid="5" relation="include">
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-        <childnode refid="9" relation="include">
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-        <childnode refid="32" relation="include">
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-      </node>
-      <node id="26">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="37">
-        <label>EXPmath.H</label>
-        <link refid="_e_x_pmath_8_h"/>
-      </node>
-      <node id="32">
-        <label>EmpCyl2d.H</label>
-        <link refid="_emp_cyl2d_8_h"/>
-        <childnode refid="33" relation="include">
-        </childnode>
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-        <childnode refid="38" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="15" relation="include">
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-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
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-      </node>
-      <node id="25">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="12" relation="include">
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-        <childnode refid="7" relation="include">
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-        <childnode refid="20" relation="include">
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-      <node id="48">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
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-      <node id="49">
-        <label>YamlCheck.H</label>
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-        </childnode>
-        <childnode refid="27" relation="include">
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-      <node id="22">
-        <label>gaussQ.H</label>
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-      </node>
-      <node id="17">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
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-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="7" relation="include">
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-      <node id="14">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
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-      <node id="20">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="21" relation="include">
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-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/FlatDisk.H</label>
-        <link refid="_flat_disk_8_h"/>
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-      <node id="51">
-        <label>NVTX.H</label>
-        <link refid="_n_v_t_x_8_h"/>
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-        <childnode refid="13" relation="include">
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-        <label>PolarBasis.H</label>
-        <link refid="_polar_basis_8_h"/>
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-      <node id="44">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="24" relation="include">
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-      </node>
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-        <label>highfive/H5DataSet.hpp</label>
-      </node>
-      <node id="30">
-        <label>highfive/H5DataSpace.hpp</label>
-      </node>
-      <node id="28">
-        <label>highfive/H5File.hpp</label>
-      </node>
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-        <label>highfive/eigen.hpp</label>
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-        <label>highfive/highfive.hpp</label>
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-    </incdepgraph>
-    <innerclass refid="class_flat_disk" prot="public">FlatDisk</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="_flat_disk_8_h_1a44ac299dfbdd6e45965acbe30c201240" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_biorth_cyl" kindref="compound">BiorthCyl</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;BiorthCyl&gt; CylPtr</definition>
-        <argsstring></argsstring>
-        <name>CylPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="10" column="25" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="10" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_FlatDisk_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_FlatDisk_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_biorth_cyl_8_h" kindref="compound">BiorthCyl.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_polar_basis_8_h" kindref="compound">PolarBasis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="_flat_disk_8_h_1a44ac299dfbdd6e45965acbe30c201240" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;BiorthCyl&gt;<sp/><ref refid="_flat_disk_8_h_1a44ac299dfbdd6e45965acbe30c201240" kindref="member">CylPtr</ref>;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaUtil.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_flat_disk" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_flat_disk" kindref="compound">FlatDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis" kindref="compound">PolarBasis</ref><sp/></highlight></codeline>
-<codeline lineno="59"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63" refid="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_flat_disk_8_h_1a44ac299dfbdd6e45965acbe30c201240" kindref="member">CylPtr</ref><sp/><ref refid="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" kindref="member">ortho</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_flat_disk_1a99ce7aa447bc828ce26a69cf18136556" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a99ce7aa447bc828ce26a69cf18136556" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_flat_disk_1a22f0831bd87fafebf499abc0556c0d60" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a22f0831bd87fafebf499abc0556c0d60" kindref="member">get_dpotl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>dpr,<sp/>Eigen::MatrixXd&amp;<sp/>dpz,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_flat_disk_1adfae4fe4709805480d401787378b14ef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1adfae4fe4709805480d401787378b14ef" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_flat_disk_1a60547addec40a8e202c206ff94497843" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a60547addec40a8e202c206ff94497843" kindref="member">getRtable</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" kindref="member">ortho</ref>-&gt;getRtable();<sp/>}</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>()</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_polar_basis_1a3bd4a78d9444ffbbe83a56ae99bea773" kindref="member">sampT</ref><sp/>=<sp/>floor(sqrt(<ref refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" kindref="member">component</ref>-&gt;<ref refid="class_component_1a19a8ac34f26702235706c33b9161e31e" kindref="member">CurTotal</ref>()));</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" kindref="member">ortho</ref>-&gt;initialize_cuda(<ref refid="class_flat_disk_1a50ea5cdeac07d334db7b0f1c2f7e714a" kindref="member">disk</ref>,<sp/>cuInterpArray,<sp/>tex);</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" kindref="member">ortho</ref>-&gt;getCudaMappingConstants();</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_flat_disk_1ac006bf5130da0326357efebf23e49dea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_flat_disk_1ac006bf5130da0326357efebf23e49dea" kindref="member">Disk2d</ref><sp/>=<sp/>std::shared_ptr&lt;EmpCyl2d::ModelCyl&gt;;</highlight></codeline>
-<codeline lineno="89" refid="class_flat_disk_1a50ea5cdeac07d334db7b0f1c2f7e714a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_flat_disk_1ac006bf5130da0326357efebf23e49dea" kindref="member">Disk2d</ref><sp/><ref refid="class_flat_disk_1a50ea5cdeac07d334db7b0f1c2f7e714a" kindref="member">disk</ref>;</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_flat_disk_1af564a3c779bd3f731e90de066198f02f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1af564a3c779bd3f731e90de066198f02f" kindref="member">setBackground</ref>();</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::tuple&lt;double,<sp/>double,<sp/>double&gt;</highlight></codeline>
-<codeline lineno="96" refid="class_flat_disk_1a7605820abb7e8222f48e04c25209f20b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_flat_disk_1a7605820abb7e8222f48e04c25209f20b" kindref="member">background</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_flat_disk_1a50ea5cdeac07d334db7b0f1c2f7e714a" kindref="member">disk</ref>-&gt;pot(r),<sp/>-<ref refid="class_flat_disk_1a50ea5cdeac07d334db7b0f1c2f7e714a" kindref="member">disk</ref>-&gt;dpot(r),<sp/>0.0};<sp/>}</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="99" refid="class_flat_disk_1a661d3b56742b8816e6ddb5ef60a1764d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a661d3b56742b8816e6ddb5ef60a1764d" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101" refid="class_flat_disk_1a9fbcdede578288260d155e0033de33d1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a9fbcdede578288260d155e0033de33d1" kindref="member">get_potl_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_flat_disk_1ac81dad1d2fc54b67f5aca603916f112c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1ac81dad1d2fc54b67f5aca603916f112c" kindref="member">acyltbl</ref>,<sp/><ref refid="class_flat_disk_1a20a52477e571fea4c0f80e5308db97ed" kindref="member">scale</ref>,<sp/><ref refid="class_flat_disk_1a84f29ab9899e8a21d9761bd20108c2a7" kindref="member">rcylmin</ref>,<sp/><ref refid="class_flat_disk_1ab46447ce29362256e6216ae996c73a1a" kindref="member">rcylmax</ref>;</highlight></codeline>
-<codeline lineno="106" refid="class_flat_disk_1a678a676a416f83fde29fc47674e279d7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_flat_disk_1a678a676a416f83fde29fc47674e279d7" kindref="member">numr</ref>;</highlight></codeline>
-<codeline lineno="107" refid="class_flat_disk_1a20ea051932dcf9a890c64230050ebaae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_flat_disk_1a20ea051932dcf9a890c64230050ebaae" kindref="member">mmax</ref>;</highlight></codeline>
-<codeline lineno="108" refid="class_flat_disk_1a015184ce4a14ed1fd6e96584d003c5b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_flat_disk_1a015184ce4a14ed1fd6e96584d003c5b0" kindref="member">knots</ref>;</highlight></codeline>
-<codeline lineno="109" refid="class_flat_disk_1a8f34e318bd07c46deb0d65e9e23bf05b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a8f34e318bd07c46deb0d65e9e23bf05b" kindref="member">model</ref>;</highlight></codeline>
-<codeline lineno="110" refid="class_flat_disk_1a990e9606b5f56506fcc9f8d1fcd97a15" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a990e9606b5f56506fcc9f8d1fcd97a15" kindref="member">biorth</ref>;</highlight></codeline>
-<codeline lineno="111" refid="class_flat_disk_1a91d1dd1d35d2b21c717f8b8d6fc73201" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_flat_disk_1a91d1dd1d35d2b21c717f8b8d6fc73201" kindref="member">logr</ref>;</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_flat_disk_1a383ce35717432fd54ec31007114ee2dc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_flat_disk_1a383ce35717432fd54ec31007114ee2dc" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116" refid="class_flat_disk_1a829b341fce5b6656537225116a0a70cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_flat_disk_1a829b341fce5b6656537225116a0a70cd" kindref="member">dump_basis</ref>;</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121" refid="class_flat_disk_1a4d17639bc22514aa13b0c20ddc62c315" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a4d17639bc22514aa13b0c20ddc62c315" kindref="member">get_pot</ref>(Eigen::MatrixXd&amp;<sp/>Vc,<sp/>Eigen::MatrixXd&amp;<sp/>Vs,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" kindref="member">ortho</ref>-&gt;get_pot(Vc,<sp/>Vs,<sp/>r,<sp/>z);<sp/>}</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Global<sp/>parameters</highlight></codeline>
-<codeline lineno="140" refid="class_flat_disk_1aaf97cb50ba9e2c8a8ef6a838f96a4e47" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_flat_disk_1aaf97cb50ba9e2c8a8ef6a838f96a4e47" kindref="member">FlatDisk</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>,<sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref>*<sp/>m=0);</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="143" refid="class_flat_disk_1a508a4d23c2eee77a4259a9519ba74cf8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_flat_disk_1a508a4d23c2eee77a4259a9519ba74cf8" kindref="member">~FlatDisk</ref>();</highlight></codeline>
-<codeline lineno="144"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_func1d_8_h.xml b/doxyxml/_func1d_8_h.xml
deleted file mode 100644
index 26a785d..0000000
--- a/doxyxml/_func1d_8_h.xml
+++ /dev/null
@@ -1,28 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_func1d_8_h" kind="file" language="C++">
-    <compoundname>Func1d.H</compoundname>
-    <innerclass refid="class_func1d" prot="public">Func1d</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Func1d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Func1d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4" refid="class_func1d" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_func1d" kindref="compound">Func1d</ref></highlight></codeline>
-<codeline lineno="5"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="6"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="7"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="8" refid="class_func1d_1af66de5be849332eec1f855f73cafc0b7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_func1d_1af66de5be849332eec1f855f73cafc0b7" kindref="member">~Func1d</ref>()<sp/>{};</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="class_func1d_1aa97c69a5b6dd24c9ef5379ed652a1966" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_func1d_1aa97c69a5b6dd24c9ef5379ed652a1966" kindref="member">CostFunction</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/Func1d.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_gen_poly_8_h.xml b/doxyxml/_gen_poly_8_h.xml
deleted file mode 100644
index 7b3dd0c..0000000
--- a/doxyxml/_gen_poly_8_h.xml
+++ /dev/null
@@ -1,200 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_gen_poly_8_h" kind="file" language="C++">
-    <compoundname>GenPoly.H</compoundname>
-    <includes local="no">cmath</includes>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
-      <node id="21">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/GenPoly.H</label>
-        <link refid="_gen_poly_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="2">
-        <label>cmath</label>
-      </node>
-      <node id="19">
-        <label>cstdlib</label>
-      </node>
-      <node id="9">
-        <label>deque</label>
-      </node>
-      <node id="14">
-        <label>functional</label>
-      </node>
-      <node id="17">
-        <label>iomanip</label>
-      </node>
-      <node id="16">
-        <label>iostream</label>
-      </node>
-      <node id="11">
-        <label>map</label>
-      </node>
-      <node id="5">
-        <label>memory</label>
-      </node>
-      <node id="6">
-        <label>random</label>
-      </node>
-      <node id="18">
-        <label>sstream</label>
-      </node>
-      <node id="12">
-        <label>string</label>
-      </node>
-      <node id="4">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_generalized_polytrope" prot="public">GeneralizedPolytrope</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_GenPoly_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_GenPoly_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="class_generalized_polytrope" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_generalized_polytrope" kindref="compound">GeneralizedPolytrope</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="8"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="10" refid="class_generalized_polytrope_1a70249bf05be2fabe096c1ffaadc7d361" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_r_u_n" kindref="compound">RUN</ref><sp/><ref refid="class_generalized_polytrope_1a70249bf05be2fabe096c1ffaadc7d361" kindref="member">mass</ref>;</highlight></codeline>
-<codeline lineno="11" refid="class_generalized_polytrope_1a75523162b4731446f4b5f7d01d1d7068" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_r_u_n" kindref="compound">RUN</ref><sp/><ref refid="class_generalized_polytrope_1a75523162b4731446f4b5f7d01d1d7068" kindref="member">dens</ref>;</highlight></codeline>
-<codeline lineno="12" refid="class_generalized_polytrope_1a801d2fae3ebe3bcb5f851f2476a4303d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_r_u_n" kindref="compound">RUN</ref><sp/><ref refid="class_generalized_polytrope_1a801d2fae3ebe3bcb5f851f2476a4303d" kindref="member">pot</ref>;</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="class_generalized_polytrope_1aa3ff71bffeec1836500e2eba7653f7ab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a8ec33ee2de60c75f23f420ee541101b0" kindref="member">n</ref>,<sp/><ref refid="class_generalized_polytrope_1a08545ef0f7801554516a7acf6f57cee9" kindref="member">m</ref>,<sp/><ref refid="class_generalized_polytrope_1aa3ff71bffeec1836500e2eba7653f7ab" kindref="member">KF</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_generalized_polytrope_1affb84a1acbbf5ee4c5f2858bf6f8ca0e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_generalized_polytrope_1affb84a1acbbf5ee4c5f2858bf6f8ca0e" kindref="member">GeneralizedPolytrope</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="19" refid="class_generalized_polytrope_1a0f470281b1c0098aae9e3dc078c8b11b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_generalized_polytrope_1a0f470281b1c0098aae9e3dc078c8b11b" kindref="member">GeneralizedPolytrope</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>num,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a8ec33ee2de60c75f23f420ee541101b0" kindref="member">n</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a08545ef0f7801554516a7acf6f57cee9" kindref="member">m</ref>,</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>eps0=1.0e-5,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>step=1.0e-5);</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_generalized_polytrope_1a77454bcd6978e4b86684ed7d4b7732d7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a77454bcd6978e4b86684ed7d4b7732d7" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="25" refid="class_generalized_polytrope_1a125f13afc28f30693e35c13dcbfde7fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a125f13afc28f30693e35c13dcbfde7fe" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="26" refid="class_generalized_polytrope_1a243e9d11aff03024e8f635ef5807af2c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a243e9d11aff03024e8f635ef5807af2c" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="27" refid="class_generalized_polytrope_1aaa1f8ae202009ce7ae1431b172960b46" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1aaa1f8ae202009ce7ae1431b172960b46" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="28" refid="class_generalized_polytrope_1ae5a4a781841c445d7945f01e4e5b6135" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1ae5a4a781841c445d7945f01e4e5b6135" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="29" refid="class_generalized_polytrope_1a840a6bc68bdcd6d06d9c841d01717b08" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a840a6bc68bdcd6d06d9c841d01717b08" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;);</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Additional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_generalized_polytrope_1ae36b9c46f56a8dbe4c1928549cb21bb0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1ae36b9c46f56a8dbe4c1928549cb21bb0" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a70249bf05be2fabe096c1ffaadc7d361" kindref="member">mass</ref>.<ref refid="class_r_u_n_1a76f53056d68ccd55c6e525cc4da63851" kindref="member">x</ref>[1];<sp/>}</highlight></codeline>
-<codeline lineno="34" refid="class_generalized_polytrope_1a6f820fed7dfb1835337fbb0edeccd2ed" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a6f820fed7dfb1835337fbb0edeccd2ed" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a70249bf05be2fabe096c1ffaadc7d361" kindref="member">mass</ref>.<ref refid="class_r_u_n_1a76f53056d68ccd55c6e525cc4da63851" kindref="member">x</ref>[<ref refid="class_generalized_polytrope_1a70249bf05be2fabe096c1ffaadc7d361" kindref="member">mass</ref>.<ref refid="class_r_u_n_1ab7530cfee3955f1a9f1deb497a83b1da" kindref="member">num</ref>];<sp/>}</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_generalized_polytrope_1a526a23d94d1f7b67b02401c38ae00765" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a526a23d94d1f7b67b02401c38ae00765" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="37" refid="class_generalized_polytrope_1aff48aa7eb441b764bec859a26e579624" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1aff48aa7eb441b764bec859a26e579624" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="38" refid="class_generalized_polytrope_1a89223dc9021ffb20c3109296a7f7ca53" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a89223dc9021ffb20c3109296a7f7ca53" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="39" refid="class_generalized_polytrope_1a148092ddae0d7b616a747861e09cb453" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a148092ddae0d7b616a747861e09cb453" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Dump<sp/>model<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_generalized_polytrope_1a5def9704ddb03bee671bb2d8d21266c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_generalized_polytrope_1a5def9704ddb03bee671bb2d8d21266c2" kindref="member">dump_model</ref>(ostream*<sp/>out);</highlight></codeline>
-<codeline lineno="43"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/GenPoly.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_grav_kernel_8_h.xml b/doxyxml/_grav_kernel_8_h.xml
deleted file mode 100644
index c4ac15f..0000000
--- a/doxyxml/_grav_kernel_8_h.xml
+++ /dev/null
@@ -1,96 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_grav_kernel_8_h" kind="file" language="C++">
-    <compoundname>GravKernel.H</compoundname>
-    <includes local="no">utility</includes>
-    <includedby refid="_direct_8_h" local="no">/home/weinberg/Projects/EXP/src/Direct.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/GravKernel.H</label>
-        <link refid="_grav_kernel_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>utility</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/src/Direct.H</label>
-        <link refid="_direct_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/GravKernel.H</label>
-        <link refid="_grav_kernel_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_plummer_soft" prot="public">PlummerSoft</innerclass>
-    <innerclass refid="class_soft_kernel" prot="public">SoftKernel</innerclass>
-    <innerclass refid="class_spline_soft" prot="public">SplineSoft</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_GravKernel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_GravKernel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;utility&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="class_soft_kernel" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_soft_kernel" kindref="compound">SoftKernel</ref></highlight></codeline>
-<codeline lineno="8"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="11" refid="class_soft_kernel_1af804c372222bc2622cc472c88ac59b61" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_soft_kernel_1af804c372222bc2622cc472c88ac59b61" kindref="member">tol</ref><sp/>=<sp/>1.0e-8;</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_soft_kernel_1afc1f982ae91e01ee09aff7d2d8e5a5c1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::pair&lt;double,<sp/>double&gt;<sp/><ref refid="class_soft_kernel_1afc1f982ae91e01ee09aff7d2d8e5a5c1" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>eps)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_plummer_soft" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_plummer_soft" kindref="compound">PlummerSoft</ref><sp/>:<sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_soft_kernel" kindref="compound">SoftKernel</ref></highlight></codeline>
-<codeline lineno="22"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_plummer_soft_1a32d77200041892a69f1224c98b242be7" refkind="member"><highlight class="normal"><sp/><sp/>std::pair&lt;double,<sp/>double&gt;<sp/><ref refid="class_plummer_soft_1a32d77200041892a69f1224c98b242be7" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>eps);</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_spline_soft" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_spline_soft" kindref="compound">SplineSoft</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_soft_kernel" kindref="compound">SoftKernel</ref></highlight></codeline>
-<codeline lineno="33"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="35" refid="class_spline_soft_1ae7558c977bb437fee1fe245e98791fbe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline_soft_1ae7558c977bb437fee1fe245e98791fbe" kindref="member">eps</ref>,<sp/><ref refid="class_spline_soft_1af071cc88f57c40e7e929b09c69be7199" kindref="member">fac0</ref>,<sp/><ref refid="class_spline_soft_1a3584d8beb6667500968f04abb3380e58" kindref="member">fac1</ref>,<sp/><ref refid="class_spline_soft_1a7d66a524798057666f68e090ab09491e" kindref="member">fac2</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="40" refid="class_spline_soft_1ad068966f2cc439ff159abb586de3cc93" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline_soft_1ad068966f2cc439ff159abb586de3cc93" kindref="member">m1</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>32.*x*x*x*(1./3.<sp/>-<sp/>6./5.*x*x<sp/>+<sp/>x*x*x);<sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_spline_soft_1a451a0f8d2f29061cb27b6cdd7ad0e2a8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline_soft_1a451a0f8d2f29061cb27b6cdd7ad0e2a8" kindref="member">m2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>16./15.*x*x*x*(20.<sp/>-<sp/>45.*x<sp/>+<sp/>36.*x*x<sp/>-<sp/>10.*x*x*x);<sp/>}</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_spline_soft_1a4233dc66ddb2aba8a29b9f5cc0ad672a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline_soft_1a4233dc66ddb2aba8a29b9f5cc0ad672a" kindref="member">p1</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>32.*x*x*(0.5<sp/>-<sp/>1.5*x*x<sp/>+<sp/>6./5.*x*x*x);<sp/>}</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_spline_soft_1aa705813a133c1be0547cdf1fdd581c21" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline_soft_1aa705813a133c1be0547cdf1fdd581c21" kindref="member">p2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>32.*x*x*(1.<sp/>-<sp/>2.*x<sp/>+<sp/>1.5*x*x<sp/>-<sp/>2./5.*x*x*x);<sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_spline_soft_1a7797e9378090aa9210340654819928a2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spline_soft_1a7797e9378090aa9210340654819928a2" kindref="member">SplineSoft</ref>()</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_spline_soft_1af071cc88f57c40e7e929b09c69be7199" kindref="member">fac0</ref><sp/>=<sp/><ref refid="class_spline_soft_1ad068966f2cc439ff159abb586de3cc93" kindref="member">m1</ref>(0.5)<sp/>-<sp/><ref refid="class_spline_soft_1a451a0f8d2f29061cb27b6cdd7ad0e2a8" kindref="member">m2</ref>(0.5);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_spline_soft_1a3584d8beb6667500968f04abb3380e58" kindref="member">fac1</ref><sp/>=<sp/><ref refid="class_spline_soft_1aa705813a133c1be0547cdf1fdd581c21" kindref="member">p2</ref>(1.0)<sp/>-<sp/><ref refid="class_spline_soft_1aa705813a133c1be0547cdf1fdd581c21" kindref="member">p2</ref>(0.5)<sp/>+<sp/><ref refid="class_spline_soft_1a4233dc66ddb2aba8a29b9f5cc0ad672a" kindref="member">p1</ref>(0.5);</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_spline_soft_1a7d66a524798057666f68e090ab09491e" kindref="member">fac2</ref><sp/>=<sp/><ref refid="class_spline_soft_1aa705813a133c1be0547cdf1fdd581c21" kindref="member">p2</ref>(1.0);</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_spline_soft_1a9689cbc5a2af8fecb3e847673bc3040a" refkind="member"><highlight class="normal"><sp/><sp/>std::pair&lt;double,<sp/>double&gt;<sp/><ref refid="class_spline_soft_1a9689cbc5a2af8fecb3e847673bc3040a" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline_soft_1ae7558c977bb437fee1fe245e98791fbe" kindref="member">eps</ref>);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/GravKernel.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_grid2_d_8_h.xml b/doxyxml/_grid2_d_8_h.xml
deleted file mode 100644
index 7c752f6..0000000
--- a/doxyxml/_grid2_d_8_h.xml
+++ /dev/null
@@ -1,161 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_grid2_d_8_h" kind="file" language="C++">
-    <compoundname>Grid2D.H</compoundname>
-    <includes local="no">fstream</includes>
-    <includes local="no">vector</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H</label>
-        <link refid="_grid2_d_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>fstream</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_grid2_d" prot="public">Grid2D</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>Grid2D_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>Grid2D_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Define<sp/>NO_MPI<sp/>to<sp/>compile<sp/>without<sp/>the<sp/>MPI<sp/>libraries</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>NO_MPI</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>=0;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_grid2_d" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_grid2_d" kindref="compound">Grid2D</ref></highlight></codeline>
-<codeline lineno="17"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>,<sp/><ref refid="class_grid2_d_1ac770165b4575f148b975a83d098cbaec" kindref="member">T</ref>,<sp/><ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="27" refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="31" refid="class_grid2_d_1a659da1bccd65da697b45f6b660197a13" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_grid2_d_1a659da1bccd65da697b45f6b660197a13" kindref="member">Grid2D</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>num,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t)<sp/>:<sp/><ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>(Rmax),<sp/><ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>(num),<sp/><ref refid="class_grid2_d_1ac770165b4575f148b975a83d098cbaec" kindref="member">T</ref>(t)</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref><sp/>=<sp/>2.0*Rmax/<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>.resize(<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>*<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>,<sp/>0.0);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_grid2_d_1a35d5cb14b2ffd5037fc030f5d83e13c2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_grid2_d_1a35d5cb14b2ffd5037fc030f5d83e13c2" kindref="member">Grid2D</ref>(std::istream&amp;<sp/>in)<sp/>{<sp/><ref refid="class_grid2_d_1ae4501b9e24f8c7caaca5721ac410f326" kindref="member">read</ref>(in);<sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_grid2_d_1aed116c892588ab434fc298e03f06dbe2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1aed116c892588ab434fc298e03f06dbe2" kindref="member">addPoint</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y)</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x&lt;-R<sp/>or<sp/>x&gt;=<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref><sp/>or<sp/>y&lt;-R<sp/>or<sp/>y&gt;=<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>iX<sp/>=<sp/>(x<sp/>+<sp/><ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>)/<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>iY<sp/>=<sp/>(y<sp/>+<sp/><ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>)/<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>[iX*<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>+iY]<sp/>+=<sp/>mass;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_grid2_d_1abad8a36ba11951796e836c60c99b8c31" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1abad8a36ba11951796e836c60c99b8c31" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y)</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Bounds<sp/>check</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x&lt;-R<sp/>or<sp/>x&gt;=<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref><sp/>or<sp/>y&lt;-R<sp/>or<sp/>y&gt;=<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Grid<sp/>indices</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>iX1<sp/>=<sp/>(x<sp/>+<sp/><ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>)/<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>,<sp/>iX2;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>iY1<sp/>=<sp/>(y<sp/>+<sp/><ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>)/<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>,<sp/>iY2;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Sanity<sp/>check<sp/>for<sp/>enclosing<sp/>bin</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/>iX1<sp/>=<sp/>std::min&lt;int&gt;(iX1,<sp/><ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>-1);</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/>iY1<sp/>=<sp/>std::min&lt;int&gt;(iY1,<sp/><ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>-1);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Closest<sp/>bin<sp/>center</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1<sp/>=<sp/>-<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref><sp/>+<sp/>(iX1<sp/>+<sp/>0.5)*<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>;</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y1<sp/>=<sp/>-<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref><sp/>+<sp/>(iY1<sp/>+<sp/>0.5)*<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x&lt;x1)<sp/>{</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iX1&gt;0)<sp/><sp/><sp/>iX2<sp/>=<sp/>iX1<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>iX2<sp/>=<sp/>iX1<sp/>+<sp/>1;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iX1&lt;<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>-1)<sp/>iX2<sp/>=<sp/>iX1<sp/>+<sp/>1;</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>iX2<sp/>=<sp/>iX1<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(y&lt;y1)<sp/>{</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iY1&gt;0)<sp/><sp/><sp/>iY2<sp/>=<sp/>iY1<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>iY2<sp/>=<sp/>iY1<sp/>+<sp/>1;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iY1&lt;<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>-1)<sp/>iY2<sp/>=<sp/>iY1<sp/>+<sp/>1;</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>iY2<sp/>=<sp/>iY1<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>The<sp/>adjacent<sp/>bin<sp/>center</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2<sp/>=<sp/>-<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref><sp/>+<sp/>(iX2<sp/>+<sp/>0.5)*<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>;</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y2<sp/>=<sp/>-<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref><sp/>+<sp/>(iY2<sp/>+<sp/>0.5)*<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>;</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Perform<sp/>the<sp/>bilinear<sp/>interpolation</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>a<sp/>=<sp/>(x2<sp/>-<sp/>x)/(x2<sp/>-<sp/>x1),<sp/>b<sp/>=<sp/>(x<sp/>-<sp/>x1)/(x2<sp/>-<sp/>x1);</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>c<sp/>=<sp/>(y2<sp/>-<sp/>y)/(y2<sp/>-<sp/>y1),<sp/>d<sp/>=<sp/>(y<sp/>-<sp/>y1)/(y2<sp/>-<sp/>y1);</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass<sp/>=<sp/></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>a*(c*<ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>[iX1*<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>+iY1]<sp/>+<sp/>d*<ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>[iX1*<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>+iY2])<sp/>+</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>b*(c*<ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>[iX2*<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>+iY1]<sp/>+<sp/>d*<ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>[iX2*<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>+iY2])<sp/>;</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Compute<sp/>and<sp/>return<sp/>the<sp/>density</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>mass/(<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>*<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>);</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107" refid="class_grid2_d_1a67d943d657ab5f6ed9897704eafce4ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1a67d943d657ab5f6ed9897704eafce4ee" kindref="member">Time</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1ac770165b4575f148b975a83d098cbaec" kindref="member">T</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="class_grid2_d_1a87db0c90847f58f98959ec17bdd1f184" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1a87db0c90847f58f98959ec17bdd1f184" kindref="member">sync</ref>()</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>NO_MPI</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/>MPI_Allreduce(MPI_IN_PLACE,<sp/><ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>.data(),<sp/><ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>*<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>,<sp/>MPI_DOUBLE,<sp/>MPI_SUM,<sp/>MPI_COMM_WORLD);</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_grid2_d_1a7247cf15129bd6d34e1b6c95ac265af0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1a7247cf15129bd6d34e1b6c95ac265af0" kindref="member">write</ref>(std::ostream&amp;<sp/>out)</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)<sp/>{</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>out.write((</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>,<sp/><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>out.write((</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>,<sp/><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>out.write((</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_grid2_d_1ac770165b4575f148b975a83d098cbaec" kindref="member">T</ref>,<sp/><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>out.write((</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" kindref="member">dr</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>out.write((</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)<ref refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" kindref="member">dens</ref>.data(),<sp/><ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>*<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>*</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="130" refid="class_grid2_d_1ae4501b9e24f8c7caaca5721ac410f326" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_grid2_d_1ae4501b9e24f8c7caaca5721ac410f326" kindref="member">read</ref>(std::istream&amp;<sp/>in)</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_grid2_d_1a41fa077e79f40ef5cc8bbc91ac93c705" kindref="member">N</ref>,<sp/><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_grid2_d_1a34926969759afd9accfb616ca4ef173a" kindref="member">R</ref>,<sp/><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">));</highlight></codeline>
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diff --git a/doxyxml/_halo_bulge_8_h.xml b/doxyxml/_halo_bulge_8_h.xml
deleted file mode 100644
index 1beb20d..0000000
--- a/doxyxml/_halo_bulge_8_h.xml
+++ /dev/null
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diff --git a/doxyxml/_hankel_8_h.xml b/doxyxml/_hankel_8_h.xml
deleted file mode 100644
index add14ed..0000000
--- a/doxyxml/_hankel_8_h.xml
+++ /dev/null
@@ -1,114 +0,0 @@
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-    <includes local="no">boost/math/tools/minima.hpp</includes>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_HankelTransform_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_HankelTransform_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;boost/math/special_functions/bessel.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;boost/math/tools/minima.hpp&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="82"><highlight class="normal"></highlight><highlight class="comment">//<sp/>END:<sp/>_HankelTransform_H</highlight><highlight class="normal"></highlight></codeline>
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deleted file mode 100644
index dec536a..0000000
--- a/doxyxml/_hunter_x_8_h.xml
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-      </node>
-      <node id="8">
-        <label>deque</label>
-      </node>
-      <node id="13">
-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
-      </node>
-      <node id="15">
-        <label>iostream</label>
-      </node>
-      <node id="10">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="5">
-        <label>random</label>
-      </node>
-      <node id="17">
-        <label>sstream</label>
-      </node>
-      <node id="11">
-        <label>string</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_hunter_disk_x" prot="public">HunterDiskX</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Hunter&apos;s<sp/>Legendre<sp/>Models<sp/>with<sp/>Maclauring<sp/>subtracted</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//<sp/>as<sp/>defined<sp/>in<sp/>Hunter<sp/>&amp;<sp/>Toomre</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_HunterX.H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_HunterX.H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="hunter_8_h" kindref="compound">hunter.h</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12" refid="class_hunter_disk_x" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_hunter_disk_x" kindref="compound">HunterDiskX</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="13"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="16" refid="class_hunter_disk_x_1a11ea93cf71efd8279820014070de4898" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_hunter_disk" kindref="compound">HunterDisk</ref><sp/>*<ref refid="class_hunter_disk_x_1a27f43cff5cfd70b64075f4eb80c7c368" kindref="member">diskN</ref>,<sp/>*<ref refid="class_hunter_disk_x_1a11ea93cf71efd8279820014070de4898" kindref="member">disk1</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_hunter_disk_x_1a9f28c950a1bad48a8ca76fc73be60995" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a9f28c950a1bad48a8ca76fc73be60995" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="18" refid="class_hunter_disk_x_1ac7a4eb7770bf7e901d8a5e4769811007" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1ac7a4eb7770bf7e901d8a5e4769811007" kindref="member">factor</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Constructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_hunter_disk_x_1abbb277972ddaaea04770fe01f150c319" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_hunter_disk_x_1abbb277972ddaaea04770fe01f150c319" kindref="member">HunterDiskX</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX=1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>MASS=1.0);</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Destructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_hunter_disk_x_1a730a90a87dd11ba40419eb91eef1042b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_hunter_disk_x_1a730a90a87dd11ba40419eb91eef1042b" kindref="member">~HunterDiskX</ref>();</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="29" refid="class_hunter_disk_x_1aadb4e4f74b978e76eb94490a7ce47a8e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1aadb4e4f74b978e76eb94490a7ce47a8e" kindref="member">set_params</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>KMAX=20.0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RCUT=8.0,<sp/></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NINT=200,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>MGRID=200,<sp/></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NHANK=400);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_hunter_disk_x_1ab9bcba1db3f28823bb333e2072a9322a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1ab9bcba1db3f28823bb333e2072a9322a" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_hunter_disk_x_1aa1a308ffa3d1b2b35a1e58d813df87df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1aa1a308ffa3d1b2b35a1e58d813df87df" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_hunter_disk_x_1a20cf6b997e9438188699be9da03c52fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a20cf6b997e9438188699be9da03c52fd" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_hunter_disk_x_1a467fdd0a08dc1ed3ffba21f6122f2dbf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a467fdd0a08dc1ed3ffba21f6122f2dbf" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_hunter_disk_x_1a848f4b3a021e57904669e5b7492957bd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a848f4b3a021e57904669e5b7492957bd" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_hunter_disk_x_1a2571c30fd730a7748689338765f540de" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a2571c30fd730a7748689338765f540de" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_hunter_disk_x_1aca107ed811b6cdd7176822c3f4cf8589" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1aca107ed811b6cdd7176822c3f4cf8589" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>double<sp/>get_max_radius(void)<sp/>{<sp/>return<sp/>rmax;<sp/>}</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_hunter_disk_x_1a6a6b44b92d9dd564aea8862b1cd090cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a6a6b44b92d9dd564aea8862b1cd090cd" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1e10;<sp/>}</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_hunter_disk_x_1a1ffee46f3d1881b501d7a15f51abd2db" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a1ffee46f3d1881b501d7a15f51abd2db" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Function<sp/>&lt;distf&gt;<sp/>not<sp/>implemented&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_hunter_disk_x_1a5662076c9a428d0d20c324288ac83cce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a5662076c9a428d0d20c324288ac83cce" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Function<sp/>&lt;dfde&gt;<sp/>not<sp/>implemented&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_hunter_disk_x_1a88978d54c210b1f392f18cc8e1ecc3f9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a88978d54c210b1f392f18cc8e1ecc3f9" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Function<sp/>&lt;dfdl&gt;<sp/>not<sp/>implemented&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_hunter_disk_x_1a9da09b7ec81260b9ad7f885af1973541" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a9da09b7ec81260b9ad7f885af1973541" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Function<sp/>&lt;d2fde2&gt;<sp/>not<sp/>implemented&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_hunter_disk_x_1a3de652c7c3aa62798f6d93e65cfe23ba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a3de652c7c3aa62798f6d93e65cfe23ba" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_hunter_disk_x_1a4f34c50e2619863d6dacf154fb8e03cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a4f34c50e2619863d6dacf154fb8e03cd" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_hunter_disk_x_1a68f8554f505edcb949f3c08226f50518" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a68f8554f505edcb949f3c08226f50518" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76" refid="class_hunter_disk_x_1a78442d565a3f0d44e8d1b1068f9637ab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_x_1a78442d565a3f0d44e8d1b1068f9637ab" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur);</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/HunterX.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_init_container_8_h.xml b/doxyxml/_init_container_8_h.xml
deleted file mode 100644
index c292290..0000000
--- a/doxyxml/_init_container_8_h.xml
+++ /dev/null
@@ -1,165 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_init_container_8_h" kind="file" language="C++">
-    <compoundname>InitContainer.H</compoundname>
-    <includes local="no">map</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/InitContainer.H</label>
-        <link refid="_init_container_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>map</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_icont" prot="public">Icont</innerclass>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="_init_container_8_h_1aa4c383fcb52894c09bd68fcf8baa8bb5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <templateparamlist>
-          <param>
-            <type>template&lt; class, class, class... &gt; class</type>
-            <declname>C</declname>
-            <defname>C</defname>
-          </param>
-          <param>
-            <type>typename K</type>
-          </param>
-          <param>
-            <type>typename V</type>
-          </param>
-          <param>
-            <type>typename...</type>
-            <declname>Args</declname>
-            <defname>Args</defname>
-          </param>
-        </templateparamlist>
-        <type>V &amp;</type>
-        <definition>V &amp; GetWithDef</definition>
-        <argsstring>(C&lt; K, V, Args... &gt; &amp;m, K const &amp;key, const V &amp;defval)</argsstring>
-        <name>GetWithDef</name>
-        <param>
-          <type>C&lt; K, V, Args... &gt; &amp;</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>K const &amp;</type>
-          <declname>key</declname>
-        </param>
-        <param>
-          <type>const V &amp;</type>
-          <declname>defval</declname>
-        </param>
-        <briefdescription>
-<para>Non-invasive, assignable, lvalue return. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/InitContainer.H" line="35" column="3" bodyfile="/home/weinberg/Projects/EXP/include/InitContainer.H" bodystart="35" bodyend="40"/>
-      </memberdef>
-      <memberdef kind="function" id="_init_container_8_h_1a9401365b5683750c84dacd81b97b54bc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <templateparamlist>
-          <param>
-            <type>template&lt; class, class, class... &gt; class</type>
-            <declname>C</declname>
-            <defname>C</defname>
-          </param>
-          <param>
-            <type>typename K</type>
-          </param>
-          <param>
-            <type>typename V</type>
-          </param>
-          <param>
-            <type>typename...</type>
-            <declname>Args</declname>
-            <defname>Args</defname>
-          </param>
-        </templateparamlist>
-        <type>V</type>
-        <definition>V GetWithDef</definition>
-        <argsstring>(const C&lt; K, V, Args... &gt; &amp;m, K const &amp;key, const V &amp;defval)</argsstring>
-        <name>GetWithDef</name>
-        <param>
-          <type>const C&lt; K, V, Args... &gt; &amp;</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>K const &amp;</type>
-          <declname>key</declname>
-        </param>
-        <param>
-          <type>const V &amp;</type>
-          <declname>defval</declname>
-        </param>
-        <briefdescription>
-<para>Non-invasive, constant rvalue return. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Wrapper template for STL containers for initializing value for new key.</para>
-<para>GetWithDef returns a value and MapWithDef returns the container.</para>
-<para>The <ref refid="class_icont" kindref="compound">Icont</ref> class derives a helper class using the STL container as a base class. This version seems the cleanest but may have slightly more overhead.</para>
-<para>This version is updated for C++11 variadic arguments. Should work for generic associative containers including the optional comparator and allocator parameters. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/InitContainer.H" line="25" column="3" bodyfile="/home/weinberg/Projects/EXP/include/InitContainer.H" bodystart="25" bodyend="30"/>
-      </memberdef>
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-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_InitContainer_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_InitContainer_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"></codeline>
-<codeline lineno="23"><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;<sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal">,</highlight><highlight class="keyword">class</highlight><highlight class="normal">,</highlight><highlight class="keyword">class</highlight><highlight class="normal">...&gt;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">C,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>K,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>V,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal">...<sp/>Args<sp/>&gt;</highlight></codeline>
-<codeline lineno="25" refid="_init_container_8_h_1a9401365b5683750c84dacd81b97b54bc" refkind="member"><highlight class="normal">V<sp/><ref refid="_init_container_8_h_1a9401365b5683750c84dacd81b97b54bc" kindref="member">GetWithDef</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>C&lt;K,V,Args...&gt;&amp;<sp/>m,<sp/>K<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">&amp;<sp/>key,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>V<sp/>&amp;<sp/>defval)</highlight></codeline>
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-<codeline lineno="29"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>it-&gt;second;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;<sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal">,</highlight><highlight class="keyword">class</highlight><highlight class="normal">,</highlight><highlight class="keyword">class</highlight><highlight class="normal">...&gt;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">C,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>K,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>V,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal">...<sp/>Args<sp/>&gt;</highlight></codeline>
-<codeline lineno="35" refid="_init_container_8_h_1aa4c383fcb52894c09bd68fcf8baa8bb5" refkind="member"><highlight class="normal">V&amp;<sp/><ref refid="_init_container_8_h_1a9401365b5683750c84dacd81b97b54bc" kindref="member">GetWithDef</ref>(C&lt;K,V,Args...&gt;&amp;<sp/>m,<sp/>K<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">&amp;<sp/>key,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>V<sp/>&amp;<sp/>defval)</highlight></codeline>
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-<codeline lineno="37"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>C&lt;K,V,Args...&gt;::iterator<sp/>it<sp/>=<sp/>m.find(<sp/>key<sp/>);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it<sp/>==<sp/>m.end())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(m[key]<sp/>=<sp/>defval);</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>it-&gt;second;</highlight></codeline>
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-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;<sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal">,</highlight><highlight class="keyword">class</highlight><highlight class="normal">,</highlight><highlight class="keyword">class</highlight><highlight class="normal">...&gt;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">C,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>K,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>V,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal">...<sp/>Args<sp/>&gt;</highlight></codeline>
-<codeline lineno="46" refid="class_icont" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_icont" kindref="compound">Icont</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>C&lt;K,<sp/>V,<sp/>Args...&gt;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_icont_1a65ba76160892e686d56ca9c5d005607a" refkind="member"><highlight class="normal"><sp/><sp/>V&amp;<sp/><ref refid="class_icont_1a65ba76160892e686d56ca9c5d005607a" kindref="member">operator[]</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>K&amp;<sp/>key)</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/>std::map&lt;K,<sp/>V,<sp/>Args...&gt;*<sp/>p<sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">std::map&lt;K,V,<sp/>Args...</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">*&gt;(</highlight><highlight class="keyword">this</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::map&lt;K,<sp/>V&gt;::iterator<sp/>it<sp/>=<sp/>p-&gt;find(key);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it<sp/>==<sp/>p-&gt;end())<sp/>{</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::pair&lt;const<sp/>K,<sp/>V&gt;<sp/>value(key,<sp/><ref refid="class_icont_1a95419daaf624c5690c7e6383b17a81bb" kindref="member">Default</ref>());</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>it<sp/>=<sp/>p-&gt;insert(value).first;<sp/></highlight><highlight class="comment">//<sp/>Insert<sp/>and<sp/>return<sp/>new<sp/>iterator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>it-&gt;second;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="65"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/InitContainer.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_iterable_8_h.xml b/doxyxml/_iterable_8_h.xml
deleted file mode 100644
index edf597e..0000000
--- a/doxyxml/_iterable_8_h.xml
+++ /dev/null
@@ -1,66 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_iterable_8_h" kind="file" language="C++">
-    <compoundname>Iterable.H</compoundname>
-    <includes local="no">iterator</includes>
-    <includes local="no">cstddef</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/Iterable.H</label>
-        <link refid="_iterable_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>cstddef</label>
-      </node>
-      <node id="2">
-        <label>iterator</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_iterable" prot="public">Iterable</innerclass>
-    <innerclass refid="struct_iterator" prot="public">Iterator</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>Iterable_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>Iterable_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iterator&gt;</highlight><highlight class="normal"><sp/></highlight><highlight class="comment">//<sp/>For<sp/>std::forward_iterator_tag</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstddef&gt;</highlight><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>std::ptrdiff_t</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="8" refid="struct_iterator" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/></highlight></codeline>
-<codeline lineno="9"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="10" refid="struct_iterator_1acdd10e3cfe71d270663c73685c1b0791" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="struct_iterator_1acdd10e3cfe71d270663c73685c1b0791" kindref="member">iterator_category</ref><sp/>=<sp/>std::forward_iterator_tag;</highlight></codeline>
-<codeline lineno="11" refid="struct_iterator_1a397e0a4d87f933bbfd566a3368aca34c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="struct_iterator_1a397e0a4d87f933bbfd566a3368aca34c" kindref="member">difference_type</ref><sp/><sp/><sp/>=<sp/>std::ptrdiff_t;</highlight></codeline>
-<codeline lineno="12" refid="struct_iterator_1ab30ee4ae468e806a7897d6a0c7705c54" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="struct_iterator_1ab30ee4ae468e806a7897d6a0c7705c54" kindref="member">value_type</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>T;</highlight></codeline>
-<codeline lineno="13" refid="struct_iterator_1a37c4732ae0b73e9fdc3a585c01750d05" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="struct_iterator_1a37c4732ae0b73e9fdc3a585c01750d05" kindref="member">pointer</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>T*;<sp/><sp/></highlight><highlight class="comment">//<sp/>or<sp/>also<sp/>value_type*</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="struct_iterator_1a104c7f213cd33d599aa25277176529d5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="struct_iterator_1a104c7f213cd33d599aa25277176529d5" kindref="member">reference</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>T&amp;;<sp/><sp/></highlight><highlight class="comment">//<sp/>or<sp/>also<sp/>value_type&amp;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="19" refid="class_iterable" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_iterable" kindref="compound">Iterable</ref>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref>&lt;T&gt;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="22" refid="class_iterable_1a1ba485e8dba76e792d973a9a23eac8d1" refkind="member"><highlight class="normal"><sp/><sp/>T*<sp/><ref refid="class_iterable_1a1ba485e8dba76e792d973a9a23eac8d1" kindref="member">ptr</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="24" refid="class_iterable_1a8ff8a2db20db0c23274bfbb2ce925c90" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="class_iterable_1a8ff8a2db20db0c23274bfbb2ce925c90" kindref="member">Iterable</ref>(T*<sp/>_ptr)<sp/>:<sp/><ref refid="class_iterable_1a1ba485e8dba76e792d973a9a23eac8d1" kindref="member">ptr</ref>(_ptr)<sp/>{}</highlight></codeline>
-<codeline lineno="25" refid="class_iterable_1a9cdbe54599a872dc80729ba43a44ed9e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_iterable" kindref="compound">Iterable</ref>&amp;<sp/><ref refid="class_iterable_1a9cdbe54599a872dc80729ba43a44ed9e" kindref="member">operator++</ref>()<sp/>{<ref refid="class_iterable_1a1ba485e8dba76e792d973a9a23eac8d1" kindref="member">ptr</ref>++;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;}</highlight></codeline>
-<codeline lineno="26" refid="class_iterable_1a5c1337488f0d3b5416346bff39c0a54a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_iterable" kindref="compound">Iterable</ref><sp/><ref refid="class_iterable_1a5c1337488f0d3b5416346bff39c0a54a" kindref="member">operator++</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>{<ref refid="class_iterable" kindref="compound">Iterable</ref><sp/>retval<sp/>=<sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;<sp/>++(*this);<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>retval;}</highlight></codeline>
-<codeline lineno="27" refid="class_iterable_1a0e9c879856f31f4e866b97141f386109" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_iterable_1a0e9c879856f31f4e866b97141f386109" kindref="member">operator==</ref>(<ref refid="class_iterable" kindref="compound">Iterable</ref><sp/>other)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_iterable_1a1ba485e8dba76e792d973a9a23eac8d1" kindref="member">ptr</ref><sp/>==<sp/>other.<ref refid="class_iterable_1a1ba485e8dba76e792d973a9a23eac8d1" kindref="member">ptr</ref>;}</highlight></codeline>
-<codeline lineno="28" refid="class_iterable_1a88dcd5e0508fdf2db02c3a5a6b0733dd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_iterable_1a88dcd5e0508fdf2db02c3a5a6b0733dd" kindref="member">operator!=</ref>(<ref refid="class_iterable" kindref="compound">Iterable</ref><sp/>other)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>!(*</highlight><highlight class="keyword">this</highlight><highlight class="normal"><sp/>==<sp/>other);}</highlight></codeline>
-<codeline lineno="29" refid="class_iterable_1a0b1241dd5184b102952ba0f70bf928df" refkind="member"><highlight class="normal"><sp/><sp/>T*<sp/><ref refid="class_iterable_1a0b1241dd5184b102952ba0f70bf928df" kindref="member">operator*</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_iterable_1a1ba485e8dba76e792d973a9a23eac8d1" kindref="member">ptr</ref>;}</highlight></codeline>
-<codeline lineno="30"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/Iterable.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_k_dtree_8_h.xml b/doxyxml/_k_dtree_8_h.xml
deleted file mode 100644
index 36910a0..0000000
--- a/doxyxml/_k_dtree_8_h.xml
+++ /dev/null
@@ -1,407 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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-  <compounddef id="_k_dtree_8_h" kind="file" language="C++">
-    <compoundname>KDtree.H</compoundname>
-    <includes local="no">algorithm</includes>
-    <includes local="no">random</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">array</includes>
-    <includes local="no">cmath</includes>
-    <includes local="no">tuple</includes>
-    <includes local="no">map</includes>
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-        <label>tuple</label>
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-      <node id="4">
-        <label>vector</label>
-      </node>
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-    <innerclass refid="class_k_dtree_1_1_cache" prot="public">KDtree::Cache</innerclass>
-    <innerclass refid="class_k_dtree_1_1kdtree" prot="public">KDtree::kdtree</innerclass>
-    <innerclass refid="struct_k_dtree_1_1kdtree_1_1node" prot="public">KDtree::kdtree::node</innerclass>
-    <innerclass refid="struct_k_dtree_1_1kdtree_1_1node__cmp" prot="private">KDtree::kdtree::node_cmp</innerclass>
-    <innerclass refid="class_k_dtree_1_1point" prot="public">KDtree::point</innerclass>
-    <innernamespace refid="namespace_k_dtree">KDtree</innernamespace>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#include<sp/>&lt;algorithm&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;random&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;array&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;tuple&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="10"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>key_t,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>value_t&gt;</highlight></codeline>
-<codeline lineno="13" refid="class_k_dtree_1_1_cache" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_k_dtree_1_1_cache" kindref="compound">Cache</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::map&lt;key_t,<sp/>value_t&gt;</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="16" refid="class_k_dtree_1_1_cache_1aa0c064f398368f4b9117787fe293a02f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1_cache_1aa0c064f398368f4b9117787fe293a02f" kindref="member">Cache</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N=1)<sp/>:<sp/><ref refid="class_k_dtree_1_1_cache_1aed57f00769b00f8c9d1964729a1ea39b" kindref="member">max_size</ref>(N)<sp/>{}</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_k_dtree_1_1_cache_1a32fbf35f2f64d89669b35c340bcfef29" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1_cache_1a32fbf35f2f64d89669b35c340bcfef29" kindref="member">resize</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N)<sp/>{<sp/><ref refid="class_k_dtree_1_1_cache_1aed57f00769b00f8c9d1964729a1ea39b" kindref="member">max_size</ref><sp/>=<sp/>N;<sp/>}</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_k_dtree_1_1_cache_1a496ef1c22183670fd782fad18c0d559f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1_cache_1a496ef1c22183670fd782fad18c0d559f" kindref="member">add</ref>(<sp/>key_t<sp/>key,<sp/>value_t<sp/>value<sp/>)</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>(*this)[key]<sp/>=<sp/>value;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(this-&gt;size()<sp/>&gt;<sp/><ref refid="class_k_dtree_1_1_cache_1aed57f00769b00f8c9d1964729a1ea39b" kindref="member">max_size</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>this-&gt;erase(--(*this).end());</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="30"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>coordinate_type,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>dimensions&gt;</highlight></codeline>
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-<codeline lineno="39"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="42" refid="class_k_dtree_1_1point_1a758b8d7d5ce3bdf7dc84fff7385fce59" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1point_1a758b8d7d5ce3bdf7dc84fff7385fce59" kindref="member">point</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="45" refid="class_k_dtree_1_1point_1af623764bce859271d5bf094aab542cc9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1point_1af623764bce859271d5bf094aab542cc9" kindref="member">point</ref>(std::array&lt;coordinate_type,<sp/>dimensions&gt;<sp/>c,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m=1,</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>=0)<sp/>:<sp/><ref refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" kindref="member">coords_</ref>(c),<sp/><ref refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" kindref="member">mass_</ref>(m),<sp/><ref refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" kindref="member">indx_</ref>(<ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>)<sp/>{}</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::array&lt;coordinate_type,<sp/>dimensions&gt;<sp/>v,</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m=1,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>=0)<sp/>:<sp/><ref refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" kindref="member">coords_</ref>(c),<sp/><ref refid="class_k_dtree_1_1point_1afb068a06a84f62a6b7878ca24e22d552" kindref="member">vels_</ref>(v),</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" kindref="member">mass_</ref>(m),<sp/><ref refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" kindref="member">indx_</ref>(<ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>)<sp/>{}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="54" refid="class_k_dtree_1_1point_1aeb4734d7cb40a203c8f2220c128a4eae" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1point_1aeb4734d7cb40a203c8f2220c128a4eae" kindref="member">point</ref>(std::initializer_list&lt;coordinate_type&gt;<sp/>list,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m=1,</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>=0)<sp/>:<sp/><ref refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" kindref="member">mass_</ref>(m),<sp/><ref refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" kindref="member">indx_</ref>(<ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>)</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n<sp/>=<sp/>std::min(dimensions,<sp/>list.size());</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::copy_n(list.begin(),<sp/>n,<sp/><ref refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" kindref="member">coords_</ref>.begin());</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="61" refid="class_k_dtree_1_1point_1aeec2c809a952b726430a57e05f7a88e1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1point_1aeec2c809a952b726430a57e05f7a88e1" kindref="member">point</ref>(std::initializer_list&lt;coordinate_type&gt;<sp/>list,</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::initializer_list&lt;coordinate_type&gt;<sp/>vlst,</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m=1,</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>=0)<sp/>:<sp/><ref refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" kindref="member">mass_</ref>(m),<sp/><ref refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" kindref="member">indx_</ref>(<ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>)</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n<sp/>=<sp/>std::min(dimensions,<sp/>list.size());</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::copy_n(list.begin(),<sp/>n,<sp/><ref refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" kindref="member">coords_</ref>.begin());</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::copy_n(vlst.begin(),<sp/>n,<sp/><ref refid="class_k_dtree_1_1point_1afb068a06a84f62a6b7878ca24e22d552" kindref="member">vels_</ref>.begin());</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n=0;<sp/>n&lt;dimensions;<sp/>n++)<sp/><ref refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" kindref="member">coords_</ref>[n]<sp/>=<sp/>p.<ref refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" kindref="member">coords_</ref>[n];</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n=0;<sp/>n&lt;dimensions;<sp/>n++)<sp/><ref refid="class_k_dtree_1_1point_1afb068a06a84f62a6b7878ca24e22d552" kindref="member">vels_</ref><sp/><sp/>[n]<sp/>=<sp/>p.<ref refid="class_k_dtree_1_1point_1afb068a06a84f62a6b7878ca24e22d552" kindref="member">vels_</ref><sp/><sp/>[n];</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" kindref="member">mass_</ref><sp/>=<sp/>p.<ref refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" kindref="member">mass_</ref>;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" kindref="member">indx_</ref><sp/>=<sp/>p.<ref refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" kindref="member">indx_</ref>;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>coordinate_type<sp/><ref refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" kindref="member">get</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="87"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" kindref="member">coords_</ref>[index];</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="91" refid="class_k_dtree_1_1point_1a3c34df22ae6c007ea39db1d51d27e83b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>coordinate_type<sp/><ref refid="class_k_dtree_1_1point_1a3c34df22ae6c007ea39db1d51d27e83b" kindref="member">vel</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="92"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1afb068a06a84f62a6b7878ca24e22d552" kindref="member">vels_</ref>[index];</highlight></codeline>
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-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
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-<codeline lineno="104"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dist<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>i<sp/>=<sp/>0;<sp/>i<sp/>&lt;<sp/>dimensions;<sp/>++i)</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>d<sp/>=<sp/><ref refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" kindref="member">get</ref>(i)<sp/>-<sp/>pt.<ref refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" kindref="member">get</ref>(i);</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dist<sp/>+=<sp/>d<sp/>*<sp/>d;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>dist;</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="122"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rvel<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>i<sp/>=<sp/>0;<sp/>i<sp/>&lt;<sp/>dimensions;<sp/>++i)</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>d<sp/>=<sp/><ref refid="class_k_dtree_1_1point_1a3c34df22ae6c007ea39db1d51d27e83b" kindref="member">vel</ref>(i)<sp/>-<sp/>pt.<ref refid="class_k_dtree_1_1point_1a3c34df22ae6c007ea39db1d51d27e83b" kindref="member">vel</ref>(i);</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>rvel<sp/>+=<sp/>d<sp/>*<sp/>d;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>rvel;</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="132" refid="class_k_dtree_1_1point_1a4af520f622c96f436069a4d1b7afa90d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1a4af520f622c96f436069a4d1b7afa90d" kindref="member">mass</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="133"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" kindref="member">mass_</ref>;</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="137" refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="138"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" kindref="member">indx_</ref>;</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="143" refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::array&lt;coordinate_type,<sp/>dimensions&gt;<sp/><ref refid="class_k_dtree_1_1point_1aa76daca7569e1b06319436b995971cec" kindref="member">coords_</ref>;</highlight></codeline>
-<codeline lineno="144" refid="class_k_dtree_1_1point_1afb068a06a84f62a6b7878ca24e22d552" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::array&lt;coordinate_type,<sp/>dimensions&gt;<sp/><ref refid="class_k_dtree_1_1point_1afb068a06a84f62a6b7878ca24e22d552" kindref="member">vels_</ref>;</highlight></codeline>
-<codeline lineno="145" refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1aa22bab8d8b520eabe9d7789dd00d8413" kindref="member">mass_</ref>;</highlight></codeline>
-<codeline lineno="146" refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point_1a69bb4a71b6c370d78b5395fccf532316" kindref="member">indx_</ref>;</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>coordinate_type,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>dimensions&gt;</highlight></codeline>
-<codeline lineno="151" refid="namespace_k_dtree_1ae65ddc968742c1a90478e83ca9cd52b5" refkind="member"><highlight class="normal"><sp/><sp/>std::ostream&amp;<sp/><ref refid="namespace_k_dtree_1ae65ddc968742c1a90478e83ca9cd52b5" kindref="member">operator&lt;&lt;</ref>(std::ostream&amp;<sp/>out,</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point&lt;coordinate_type, dimensions&gt;</ref>&amp;<sp/>pt)</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/></highlight><highlight class="charliteral">&apos;(&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>i<sp/>=<sp/>0;<sp/>i<sp/>&lt;<sp/>dimensions;<sp/>++i)<sp/>{</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i<sp/>&gt;<sp/>0)<sp/>out<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;,<sp/>&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/>pt.<ref refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" kindref="member">get</ref>(i);</highlight></codeline>
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-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/>out<sp/>&lt;&lt;<sp/></highlight><highlight class="charliteral">&apos;)&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>out;</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"></highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>coordinate_type,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>dimensions&gt;</highlight></codeline>
-<codeline lineno="165" refid="class_k_dtree_1_1kdtree" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_k_dtree_1_1kdtree" kindref="compound">kdtree</ref></highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169" refid="class_k_dtree_1_1kdtree_1a90ad8cf6e73e970269c2dd27675eaede" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_k_dtree_1_1point" kindref="compound">point_type</ref><sp/>=<sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point&lt;coordinate_type, dimensions&gt;</ref>;</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="171" refid="struct_k_dtree_1_1kdtree_1_1node" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref></highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="173" refid="struct_k_dtree_1_1kdtree_1_1node_1a73f374e8a370b52ec97bbe2c760696c0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a73f374e8a370b52ec97bbe2c760696c0" kindref="member">node</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point_type</ref>&amp;<sp/>pt)<sp/>:<sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" kindref="member">point_</ref>(pt),<sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a1b960ae93ff36d6385f90c1327bbe2b5" kindref="member">left_</ref>(nullptr),<sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a2de68af5f626fac1e412ef947b1003f5" kindref="member">right_</ref>(nullptr)</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="177" refid="struct_k_dtree_1_1kdtree_1_1node_1a791f1cbecb854afdc09431606e5776b4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>coordinate_type<sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a791f1cbecb854afdc09431606e5776b4" kindref="member">get</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="178"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" kindref="member">point_</ref>.<ref refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" kindref="member">get</ref>(index);</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="182" refid="struct_k_dtree_1_1kdtree_1_1node_1af3ead000be381d9633076f7a049c9ca1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1af3ead000be381d9633076f7a049c9ca1" kindref="member">distance</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point_type</ref>&amp;<sp/>pt)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="183"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" kindref="member">point_</ref>.<ref refid="class_k_dtree_1_1point_1a228926317c27fa58a250d543e6e3b210" kindref="member">distance</ref>(pt);</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="186" refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point_type</ref><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" kindref="member">point_</ref>;</highlight></codeline>
-<codeline lineno="187" refid="struct_k_dtree_1_1kdtree_1_1node_1a1b960ae93ff36d6385f90c1327bbe2b5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>*<sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a1b960ae93ff36d6385f90c1327bbe2b5" kindref="member">left_</ref>;</highlight></codeline>
-<codeline lineno="188" refid="struct_k_dtree_1_1kdtree_1_1node_1a2de68af5f626fac1e412ef947b1003f5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>*<sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node_1a2de68af5f626fac1e412ef947b1003f5" kindref="member">right_</ref>;</highlight></codeline>
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-<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="191" refid="class_k_dtree_1_1kdtree_1a73c843c42fd511a710344813eb7e9376" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_k_dtree_1_1_cache" kindref="compound">cache</ref><sp/>=<sp/><ref refid="class_k_dtree_1_1_cache" kindref="compound">Cache&lt;double, node*&gt;</ref>;</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"></highlight></codeline>
-<codeline lineno="195" refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>*<sp/><ref refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" kindref="member">root_</ref>;</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197" refid="class_k_dtree_1_1kdtree_1ad7a1d004e9c6c0c775041dc47f487f1f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1ad7a1d004e9c6c0c775041dc47f487f1f" kindref="member">visited_</ref>;</highlight></codeline>
-<codeline lineno="198" refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;node&gt;<sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>;</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="200" refid="struct_k_dtree_1_1kdtree_1_1node__cmp" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_k_dtree_1_1kdtree_1_1node__cmp" kindref="compound">node_cmp</ref></highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="202" refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1a7a4132e4f7e62538751b148eea6fe9e1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1a7a4132e4f7e62538751b148eea6fe9e1" kindref="member">node_cmp</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index)<sp/>:<sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1ad822414d04812c9f94f19f612ca56f8c" kindref="member">index_</ref>(index)</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight></codeline>
-<codeline lineno="206" refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1a75cfe2eb6e7ec79e452604855e2cdb18" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1a75cfe2eb6e7ec79e452604855e2cdb18" kindref="member">operator()</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>&amp;<sp/>n1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>&amp;<sp/>n2)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="207"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>n1.<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" kindref="member">point_</ref>.<ref refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" kindref="member">get</ref>(<ref refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1ad822414d04812c9f94f19f612ca56f8c" kindref="member">index_</ref>)<sp/>&lt;<sp/>n2.<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" kindref="member">point_</ref>.<ref refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" kindref="member">get</ref>(<ref refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1ad822414d04812c9f94f19f612ca56f8c" kindref="member">index_</ref>);</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="210" refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1ad822414d04812c9f94f19f612ca56f8c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node__cmp_1ad822414d04812c9f94f19f612ca56f8c" kindref="member">index_</ref>;</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="213" refid="class_k_dtree_1_1kdtree_1aa32d61a1534b52c07765750706a5335f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>*<sp/><ref refid="class_k_dtree_1_1kdtree_1aa32d61a1534b52c07765750706a5335f" kindref="member">make_tree</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>begin,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>end,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index)</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(end<sp/>&lt;=<sp/>begin)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n<sp/>=<sp/>begin<sp/>+<sp/>(end<sp/>-<sp/>begin)/2;</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::nth_element(&amp;<ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>[begin],<sp/>&amp;<ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>[n],<sp/>&amp;<ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>[end],<sp/><ref refid="struct_k_dtree_1_1kdtree_1_1node__cmp" kindref="compound">node_cmp</ref>(index));</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>index<sp/>=<sp/>(index<sp/>+<sp/>1)<sp/>%<sp/>dimensions;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>[n].left_<sp/><sp/>=<sp/><ref refid="class_k_dtree_1_1kdtree_1aa32d61a1534b52c07765750706a5335f" kindref="member">make_tree</ref>(begin,<sp/>n,<sp/>index);</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>[n].right_<sp/>=<sp/><ref refid="class_k_dtree_1_1kdtree_1aa32d61a1534b52c07765750706a5335f" kindref="member">make_tree</ref>(n<sp/>+<sp/>1,<sp/>end,<sp/>index);</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>[n];</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="224" refid="class_k_dtree_1_1kdtree_1aa58bba9dfe7d739510ef269d0eda12a7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1aa58bba9dfe7d739510ef269d0eda12a7" kindref="member">nearestN</ref>(<ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>*<sp/>root,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point_type</ref>&amp;<sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point</ref>,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1_cache" kindref="compound">cache</ref>&amp;<sp/>best_)</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(root<sp/>==<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"></highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++<ref refid="class_k_dtree_1_1kdtree_1ad7a1d004e9c6c0c775041dc47f487f1f" kindref="member">visited_</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>diagnostic<sp/>info<sp/>only</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>d<sp/>=<sp/>root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1af3ead000be381d9633076f7a049c9ca1" kindref="member">distance</ref>(<ref refid="class_k_dtree_1_1point" kindref="compound">point</ref>);</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(best_.size()&lt;N<sp/>||<sp/>d<sp/>&lt;<sp/>best_.rbegin()-&gt;first)<sp/>{</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>best_.<ref refid="class_k_dtree_1_1_cache_1a496ef1c22183670fd782fad18c0d559f" kindref="member">add</ref>(d,<sp/>root);</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>This<sp/>is<sp/>only<sp/>correct<sp/>if<sp/>the<sp/>test<sp/>point<sp/>is<sp/>never<sp/>in<sp/>the<sp/>data<sp/>set<sp/>.<sp/>.<sp/>.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>if<sp/>(best_.begin()-&gt;first<sp/>==<sp/>0)<sp/>return;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dx<sp/>=<sp/>root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a791f1cbecb854afdc09431606e5776b4" kindref="member">get</ref>(index)<sp/>-<sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point</ref>.<ref refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" kindref="member">get</ref>(index);</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>index<sp/>=<sp/>(index<sp/>+<sp/>1)<sp/>%<sp/>dimensions;</highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1aa58bba9dfe7d739510ef269d0eda12a7" kindref="member">nearestN</ref>(dx<sp/>&gt;<sp/>0<sp/>?<sp/>root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a1b960ae93ff36d6385f90c1327bbe2b5" kindref="member">left_</ref><sp/><sp/>:<sp/>root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a2de68af5f626fac1e412ef947b1003f5" kindref="member">right_</ref>,<sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point</ref>,<sp/>index,<sp/>N,<sp/>best_);</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(best_.size()&gt;=N<sp/>and<sp/>dx<sp/>*<sp/>dx<sp/>&gt;=<sp/>best_.rbegin()-&gt;first)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1aa58bba9dfe7d739510ef269d0eda12a7" kindref="member">nearestN</ref>(dx<sp/>&gt;<sp/>0<sp/>?<sp/>root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a2de68af5f626fac1e412ef947b1003f5" kindref="member">right_</ref><sp/>:<sp/>root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a1b960ae93ff36d6385f90c1327bbe2b5" kindref="member">left_</ref>,<sp/><sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point</ref>,<sp/>index,<sp/>N,<sp/>best_);</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="248" refid="class_k_dtree_1_1kdtree_1a08ace98fabf7f04410138593270d1cee" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1a08ace98fabf7f04410138593270d1cee" kindref="member">accum</ref>(<ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>*<sp/>root,<sp/>std::vector&lt;std::vector&lt;unsigned<sp/>long&gt;&gt;&amp;<sp/>ret,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>cur)</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>ret[cur].push_back(root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" kindref="member">point_</ref>.<ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>());</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a1b960ae93ff36d6385f90c1327bbe2b5" kindref="member">left_</ref>)<sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a08ace98fabf7f04410138593270d1cee" kindref="member">accum</ref>(root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a1b960ae93ff36d6385f90c1327bbe2b5" kindref="member">left_</ref>,<sp/><sp/>ret,<sp/>cur);</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a2de68af5f626fac1e412ef947b1003f5" kindref="member">right_</ref>)<sp/><ref refid="class_k_dtree_1_1kdtree_1a08ace98fabf7f04410138593270d1cee" kindref="member">accum</ref>(root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a2de68af5f626fac1e412ef947b1003f5" kindref="member">right_</ref>,<sp/>ret,<sp/>cur);</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255" refid="class_k_dtree_1_1kdtree_1a3f1ff1ad7101d0cca08124390a4d8628" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1a3f1ff1ad7101d0cca08124390a4d8628" kindref="member">walk</ref>(<ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref>*<sp/>root,<sp/>std::vector&lt;std::vector&lt;unsigned<sp/>long&gt;&gt;&amp;<sp/>ret,</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lev,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>level)</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(lev<sp/>==<sp/>level)<sp/><ref refid="class_k_dtree_1_1kdtree_1a08ace98fabf7f04410138593270d1cee" kindref="member">accum</ref>(root,<sp/>ret,<sp/>cur);</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ret[cur].push_back(root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a4b85af0f26388e84665ba184155ba3a4" kindref="member">point_</ref>.<ref refid="class_k_dtree_1_1point_1a93001f2f3d45f19f7c2b178df4ae2a7f" kindref="member">indx</ref>());</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a3f1ff1ad7101d0cca08124390a4d8628" kindref="member">walk</ref>(root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a1b960ae93ff36d6385f90c1327bbe2b5" kindref="member">left_</ref>,<sp/><sp/>ret,<sp/>2*cur<sp/>+<sp/>0,<sp/>lev<sp/>+<sp/>1,<sp/>level);</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a3f1ff1ad7101d0cca08124390a4d8628" kindref="member">walk</ref>(root-&gt;<ref refid="struct_k_dtree_1_1kdtree_1_1node_1a2de68af5f626fac1e412ef947b1003f5" kindref="member">right_</ref>,<sp/>ret,<sp/>2*cur<sp/>+<sp/>1,<sp/>lev<sp/>+<sp/>1,<sp/>level);</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"></highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="267"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"></highlight></codeline>
-<codeline lineno="270"><highlight class="normal"></highlight></codeline>
-<codeline lineno="271" refid="class_k_dtree_1_1kdtree_1a3f2048b06eab9fc46b0c9c5bcc9bc714" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a3f2048b06eab9fc46b0c9c5bcc9bc714" kindref="member">kdtree</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree" kindref="compound">kdtree</ref>&amp;)<sp/>=<sp/></highlight><highlight class="keyword">delete</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="272" refid="class_k_dtree_1_1kdtree_1a95c7055268303a010a957cb9a2f72708" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree" kindref="compound">kdtree</ref>&amp;<sp/><ref refid="class_k_dtree_1_1kdtree_1a95c7055268303a010a957cb9a2f72708" kindref="member">operator=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree" kindref="compound">kdtree</ref>&amp;)<sp/>=<sp/></highlight><highlight class="keyword">delete</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>iterator&gt;</highlight></codeline>
-<codeline lineno="283" refid="class_k_dtree_1_1kdtree_1a2dc15e091ae69946ab7242675c7972b3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a2dc15e091ae69946ab7242675c7972b3" kindref="member">kdtree</ref>(iterator<sp/>begin,<sp/>iterator<sp/>end)</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ad7a1d004e9c6c0c775041dc47f487f1f" kindref="member">visited_</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>.reserve(std::distance(begin,<sp/>end));</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>i<sp/>=<sp/>begin;<sp/>i<sp/>!=<sp/>end;<sp/>++i)</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>.emplace_back(*i);</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" kindref="member">root_</ref><sp/>=<sp/><ref refid="class_k_dtree_1_1kdtree_1aa32d61a1534b52c07765750706a5335f" kindref="member">make_tree</ref>(0,<sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>.size(),<sp/>0);</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>func&gt;</highlight></codeline>
-<codeline lineno="301" refid="class_k_dtree_1_1kdtree_1a96221d70f375af756bb1d507d33aabd1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a96221d70f375af756bb1d507d33aabd1" kindref="member">kdtree</ref>(func&amp;&amp;<sp/>f,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ad7a1d004e9c6c0c775041dc47f487f1f" kindref="member">visited_</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>.reserve(n);</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>i<sp/>=<sp/>0;<sp/>i<sp/>&lt;<sp/>n;<sp/>++i)</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>.emplace_back(f());</highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" kindref="member">root_</ref><sp/>=<sp/><ref refid="class_k_dtree_1_1kdtree_1aa32d61a1534b52c07765750706a5335f" kindref="member">make_tree</ref>(0,<sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>.size(),<sp/>0);</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="313" refid="class_k_dtree_1_1kdtree_1a5444c39408966995b6ec3634087ec521" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1a5444c39408966995b6ec3634087ec521" kindref="member">empty</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="314"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1ae459908407ba06e78f5d11739d622b53" kindref="member">nodes_</ref>.empty();</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="322" refid="class_k_dtree_1_1kdtree_1a50778a9c54c2b709400e2a20c8e7dc2a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1a50778a9c54c2b709400e2a20c8e7dc2a" kindref="member">visited</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="323"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1ad7a1d004e9c6c0c775041dc47f487f1f" kindref="member">visited_</ref>;</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="331" refid="class_k_dtree_1_1kdtree_1a024425e1dac5ca602177aa0fbc114505" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1kdtree_1a024425e1dac5ca602177aa0fbc114505" kindref="member">distance</ref>(<ref refid="class_k_dtree_1_1_cache" kindref="compound">cache</ref>&amp;<sp/>best_)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="332"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::sqrt(best_.begin()-&gt;first);</highlight></codeline>
-<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/>std::tuple&lt;point_type,<sp/>double,<sp/>double,<sp/>cache&gt;</highlight></codeline>
-<codeline lineno="347" refid="class_k_dtree_1_1kdtree_1a1184c06c17ad742ef1d21321f48c9c6e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a1184c06c17ad742ef1d21321f48c9c6e" kindref="member">nearestN</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point_type</ref>&amp;<sp/>pt,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N)</highlight></codeline>
-<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" kindref="member">root_</ref><sp/>==<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::logic_error(</highlight><highlight class="stringliteral">&quot;tree<sp/>is<sp/>empty&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1_cache" kindref="compound">cache</ref><sp/>best_(N);</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ad7a1d004e9c6c0c775041dc47f487f1f" kindref="member">visited_</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1aa58bba9dfe7d739510ef269d0eda12a7" kindref="member">nearestN</ref>(<ref refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" kindref="member">root_</ref>,<sp/>pt,<sp/>0,<sp/>N,<sp/>best_);</highlight></codeline>
-<codeline lineno="353"><highlight class="normal"></highlight></codeline>
-<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>wgt<sp/>=<sp/>0.0;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Sum<sp/>weights</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>b<sp/>:<sp/>best_)<sp/>wgt<sp/>+=<sp/>b.second-&gt;point_.mass();</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"></highlight></codeline>
-<codeline lineno="357"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>__GNUC__<sp/>&gt;<sp/>6<sp/>or<sp/>defined(__clang__)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{best_.begin()-&gt;second-&gt;point_,<sp/>wgt,<sp/>std::sqrt(best_.rbegin()-&gt;first),<sp/>best_};</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::tuple&lt;point_type,<sp/>double,<sp/>double,<sp/>cache&gt;<sp/>ret;</highlight></codeline>
-<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::get&lt;0&gt;(ret)<sp/>=<sp/>best_.begin()-&gt;second-&gt;point_;</highlight></codeline>
-<codeline lineno="362"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::get&lt;1&gt;(ret)<sp/>=<sp/>wgt;</highlight></codeline>
-<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::get&lt;2&gt;(ret)<sp/>=<sp/>std::sqrt(best_.rbegin()-&gt;first);</highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::get&lt;3&gt;(ret)<sp/>=<sp/>best_;</highlight></codeline>
-<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="366"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="368"><highlight class="normal"></highlight></codeline>
-<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/>std::tuple&lt;std::vector&lt;point_type&gt;,<sp/>double,<sp/><ref refid="class_k_dtree_1_1kdtree_1a73c843c42fd511a710344813eb7e9376" kindref="member">cache</ref>&gt;</highlight></codeline>
-<codeline lineno="380" refid="class_k_dtree_1_1kdtree_1a9f434a583dfc36c081bc847ce08f604b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a9f434a583dfc36c081bc847ce08f604b" kindref="member">nearestList</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_k_dtree_1_1point" kindref="compound">point_type</ref>&amp;<sp/>pt,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N)</highlight></codeline>
-<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" kindref="member">root_</ref><sp/>==<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">)<sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::logic_error(</highlight><highlight class="stringliteral">&quot;tree<sp/>is<sp/>empty&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1_cache" kindref="compound">cache</ref><sp/>best_(N);</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1ad7a1d004e9c6c0c775041dc47f487f1f" kindref="member">visited_</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1aa58bba9dfe7d739510ef269d0eda12a7" kindref="member">nearestN</ref>(<ref refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" kindref="member">root_</ref>,<sp/>pt,<sp/>0,<sp/>N,<sp/>best_);</highlight></codeline>
-<codeline lineno="386"><highlight class="normal"></highlight></codeline>
-<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;point_type&gt;<sp/>pts;<sp/></highlight><highlight class="comment">//<sp/>The<sp/>returned<sp/>point<sp/>list</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>b<sp/>:<sp/>best_)<sp/>pts.push_back(b.second-&gt;point_);</highlight></codeline>
-<codeline lineno="389"><highlight class="normal"></highlight></codeline>
-<codeline lineno="390"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>__GNUC__<sp/>&gt;<sp/>6</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{pts,<sp/>std::sqrt(best_.rbegin()-&gt;first),<sp/>best_};</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::tuple&lt;std::vector&lt;point_type&gt;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&gt;<sp/>ret;</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::get&lt;0&gt;(ret)<sp/>=<sp/>pts;</highlight></codeline>
-<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::get&lt;1&gt;(ret)<sp/>=<sp/>std::sqrt(best_.rbegin()-&gt;first);</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::get&lt;2&gt;(ret)<sp/>=<sp/>best_;</highlight></codeline>
-<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="399"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="400"><highlight class="normal"></highlight></codeline>
-<codeline lineno="401" refid="class_k_dtree_1_1kdtree_1ac2e6fafd4d40a8bf6e9fc6e4c1ab5d67" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_k_dtree_1_1kdtree_1ac2e6fafd4d40a8bf6e9fc6e4c1ab5d67" kindref="member">getDist</ref>(<ref refid="class_k_dtree_1_1_cache" kindref="compound">cache</ref>&amp;<sp/>best_)</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/>ret;</highlight></codeline>
-<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>v<sp/>:<sp/>best_)<sp/>ret.push_back(v.first);</highlight></codeline>
-<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="408" refid="class_k_dtree_1_1kdtree_1a6983e3adb42de73fe6250532e0171091" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::vector&lt;unsigned<sp/>long&gt;&gt;<sp/><ref refid="class_k_dtree_1_1kdtree_1a6983e3adb42de73fe6250532e0171091" kindref="member">getPartition</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>level)</highlight></codeline>
-<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>partitions<sp/>=<sp/>(1<sp/>&lt;&lt;<sp/>level);</highlight></codeline>
-<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;std::vector&lt;unsigned<sp/>long&gt;&gt;<sp/>ret(partitions);</highlight></codeline>
-<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_k_dtree_1_1kdtree_1a3f1ff1ad7101d0cca08124390a4d8628" kindref="member">walk</ref>(<ref refid="class_k_dtree_1_1kdtree_1a05e29ac38ae5a71beda716fbfddbc766" kindref="member">root_</ref>,<sp/>ret,<sp/>0,<sp/>0,<sp/>level);</highlight></codeline>
-<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="415"><highlight class="normal"></highlight></codeline>
-<codeline lineno="416"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="417"><highlight class="normal"></highlight></codeline>
-<codeline lineno="418"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="419"><highlight class="normal"></highlight><highlight class="comment">//<sp/>END:<sp/>namespace<sp/>KDtree</highlight><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/KDtree.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_make_model_8_h.xml b/doxyxml/_make_model_8_h.xml
deleted file mode 100644
index 21f2e5b..0000000
--- a/doxyxml/_make_model_8_h.xml
+++ /dev/null
@@ -1,191 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_make_model_8_h" kind="file" language="C++">
-    <compoundname>MakeModel.H</compoundname>
-    <includes local="no">string</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
-      <node id="20">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
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-        <link refid="_monot_cubic_interpolator_8_h"/>
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-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
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-      </node>
-      <node id="19">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
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-        <childnode refid="12" relation="include">
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-      <node id="14">
-        <label>gaussQ.H</label>
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-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
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-        <childnode refid="18" relation="include">
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-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/PhaseSpace/MakeModel.H</label>
-        <link refid="_make_model_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="18">
-        <label>cstdlib</label>
-      </node>
-      <node id="9">
-        <label>deque</label>
-      </node>
-      <node id="13">
-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
-      </node>
-      <node id="15">
-        <label>iostream</label>
-      </node>
-      <node id="11">
-        <label>map</label>
-      </node>
-      <node id="3">
-        <label>memory</label>
-      </node>
-      <node id="7">
-        <label>random</label>
-      </node>
-      <node id="17">
-        <label>sstream</label>
-      </node>
-      <node id="2">
-        <label>string</label>
-      </node>
-      <node id="6">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_make_model" prot="public">MakeModel</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_MakeModel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_MakeModel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_make_model" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_make_model" kindref="compound">MakeModel</ref><sp/></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="15" refid="class_make_model_1a70b803431a08c097ef8d161163257199" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_make_model_1a70b803431a08c097ef8d161163257199" kindref="member">num</ref>;</highlight></codeline>
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-<codeline lineno="18" refid="class_make_model_1ab1d71bb80b5f3f57f95f60d1eabeb833" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_make_model_1ad4cba032a10c6929ed001a8b4d6dfaaa" kindref="member">r</ref>,<sp/><ref refid="class_make_model_1ab1d71bb80b5f3f57f95f60d1eabeb833" kindref="member">d</ref>,<sp/><ref refid="class_make_model_1a404d9b3349b8674d2c476b5f737ff4be" kindref="member">m</ref>,<sp/><ref refid="class_make_model_1a51d88af2cd3dc16ff40e160122bf5a4f" kindref="member">p</ref>,<sp/><ref refid="class_make_model_1a15ddf70fa8edd5f8d1869e24822635c6" kindref="member">p1</ref>;<sp/></highlight></codeline>
-<codeline lineno="19" refid="class_make_model_1a1056c6991fdfbaa980008c3134a4fd41" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_make_model_1a1056c6991fdfbaa980008c3134a4fd41" kindref="member">dm</ref>;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="24" refid="class_make_model_1a254734fd8582e9a90fc1fb9cf242756a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_make_model_1a254734fd8582e9a90fc1fb9cf242756a" kindref="member">MakeModel</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rmax,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_make_model_1af4d68da3c528bd1c71e8918456ce1c3b" kindref="member">logr</ref>=</highlight><highlight class="keyword">true</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_make_model_1a869ba19a9fff43debf21b2ba7bb94915" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SphericalModelTable&gt;<sp/><ref refid="class_make_model_1a869ba19a9fff43debf21b2ba7bb94915" kindref="member">Compute</ref>();</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_make_model_1adfe91918c6dc9ab5262e66af6d6f97f1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_make_model_1adfe91918c6dc9ab5262e66af6d6f97f1" kindref="member">WriteModel</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>filename);</highlight></codeline>
-<codeline lineno="31"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/MakeModel.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_mixture_basis_8_h.xml b/doxyxml/_mixture_basis_8_h.xml
deleted file mode 100644
index 511cbb1..0000000
--- a/doxyxml/_mixture_basis_8_h.xml
+++ /dev/null
@@ -1,824 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_mixture_basis_8_h" kind="file" language="C++">
-    <compoundname>MixtureBasis.H</compoundname>
-    <includes refid="_two_center_8_h" local="no">TwoCenter.H</includes>
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-      <node id="62">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="5" relation="include">
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-        <childnode refid="33" relation="include">
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-        <childnode refid="14" relation="include">
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-        </childnode>
-        <childnode refid="8" relation="include">
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-      </node>
-      <node id="75">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
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-        <childnode refid="29" relation="include">
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-      </node>
-      <node id="76">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
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-        </childnode>
-      </node>
-      <node id="27">
-        <label>DiskWithHalo.H</label>
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-        <childnode refid="12" relation="include">
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-      </node>
-      <node id="72">
-        <label>EXPException.H</label>
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-        <childnode refid="13" relation="include">
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-        <childnode refid="30" relation="include">
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-      </node>
-      <node id="79">
-        <label>EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
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-        <childnode refid="14" relation="include">
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-        <childnode refid="61" relation="include">
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-        <childnode refid="16" relation="include">
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-        <childnode refid="23" relation="include">
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-        <childnode refid="17" relation="include">
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-        <childnode refid="63" relation="include">
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-        <childnode refid="80" relation="include">
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-        <childnode refid="3" relation="include">
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-        <childnode refid="82" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="80">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="81" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
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-      <node id="51">
-        <label>PseudoAccel.H</label>
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-        <childnode refid="52" relation="include">
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-        <childnode refid="53" relation="include">
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-      <node id="26">
-        <label>QPDistF.H</label>
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-        <childnode refid="10" relation="include">
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-        <childnode refid="7" relation="include">
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-        <childnode refid="21" relation="include">
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-      <node id="53">
-        <label>QuadLS.H</label>
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-        <childnode refid="5" relation="include">
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-        <childnode refid="10" relation="include">
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-      <node id="3">
-        <label>SLGridMP2.H</label>
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-        </childnode>
-        <childnode refid="5" relation="include">
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-      <node id="64">
-        <label>Species.H</label>
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-        <childnode refid="16" relation="include">
-        </childnode>
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-        <label>Sphere.H</label>
-        <link refid="_sphere_8_h"/>
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-        <label>SphericalBasis.H</label>
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-        <childnode refid="15" relation="include">
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-        </childnode>
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-        </childnode>
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-      <node id="2">
-        <label>TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
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-        <label>chkTimer.H</label>
-        <link refid="chk_timer_8_h"/>
-        <childnode refid="60" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="58">
-        <label>coef.H</label>
-        <link refid="src_2coef_8_h"/>
-      </node>
-      <node id="65">
-        <label>expand.H</label>
-        <link refid="expand_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
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-        <childnode refid="8" relation="include">
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-        <name>CALL_MEMBER_FN</name>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_MixtureBasis_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_MixtureBasis_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4" refid="_mixture_basis_8_h_1a9c75e3ed4f289dca9f75ac0cd3b8ac7e" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>CALL_MEMBER_FN(object,ptrToMember)<sp/><sp/>((object).*(ptrToMember))<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_two_center_8_h" kindref="compound">TwoCenter.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8" refid="class_mixture_basis" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref></highlight></codeline>
-<codeline lineno="9"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_mixture_basis_1a6161a8310c6ff14ff1d3f95dc7074d62" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>double<sp/>(<ref refid="class_two_center" kindref="compound">TwoCenter</ref>::*<ref refid="class_mixture_basis_1a6161a8310c6ff14ff1d3f95dc7074d62" kindref="member">mixFunc</ref>)(double<sp/>*<ref refid="class_mixture_basis_1a4c6266875ab6084d36d62e39c02efc9d" kindref="member">p</ref>);</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_mixture_basis_1addf9949f10af52c168cf49966de8de4e" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;*<sp/><ref refid="class_mixture_basis_1addf9949f10af52c168cf49966de8de4e" kindref="member">ctr</ref>;</highlight></codeline>
-<codeline lineno="16" refid="class_mixture_basis_1a4c6266875ab6084d36d62e39c02efc9d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_two_center" kindref="compound">TwoCenter</ref><sp/>*<ref refid="class_mixture_basis_1a4c6266875ab6084d36d62e39c02efc9d" kindref="member">p</ref>;</highlight></codeline>
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-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>debugging</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_mixture_basis_1a081a9e9230478d4b0cf4e42478d7e859" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_mixture_basis_1a081a9e9230478d4b0cf4e42478d7e859" kindref="member">MixtureBasis</ref>(<ref refid="class_two_center" kindref="compound">TwoCenter</ref>&amp;<sp/>instance,<sp/>vector&lt;double&gt;<sp/>*c,</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>ID,<sp/><ref refid="class_mixture_basis_1a6161a8310c6ff14ff1d3f95dc7074d62" kindref="member">mixFunc</ref><sp/>func)<sp/>:<sp/></highlight></codeline>
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diff --git a/doxyxml/_monot_cubic_interpolator_8_h.xml b/doxyxml/_monot_cubic_interpolator_8_h.xml
deleted file mode 100644
index 80a9a5b..0000000
--- a/doxyxml/_monot_cubic_interpolator_8_h.xml
+++ /dev/null
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-<codeline lineno="12"><highlight class="comment"><sp/><sp/>Copyright<sp/>(C)<sp/>2006<sp/>Statoil<sp/>ASA</highlight></codeline>
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-<codeline lineno="14"><highlight class="comment"><sp/><sp/>This<sp/>program<sp/>is<sp/>free<sp/>software;<sp/>you<sp/>can<sp/>redistribute<sp/>it<sp/>and/or</highlight></codeline>
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-<codeline lineno="16"><highlight class="comment"><sp/><sp/>as<sp/>published<sp/>by<sp/>the<sp/>Free<sp/>Software<sp/>Foundation;<sp/>either<sp/>version<sp/>2</highlight></codeline>
-<codeline lineno="17"><highlight class="comment"><sp/><sp/>of<sp/>the<sp/>License,<sp/>or<sp/>(at<sp/>your<sp/>option)<sp/>any<sp/>later<sp/>version.</highlight></codeline>
-<codeline lineno="18"><highlight class="comment"><sp/><sp/></highlight></codeline>
-<codeline lineno="19"><highlight class="comment"><sp/><sp/>This<sp/>program<sp/>is<sp/>distributed<sp/>in<sp/>the<sp/>hope<sp/>that<sp/>it<sp/>will<sp/>be<sp/>useful,</highlight></codeline>
-<codeline lineno="20"><highlight class="comment"><sp/><sp/>but<sp/>WITHOUT<sp/>ANY<sp/>WARRANTY;<sp/>without<sp/>even<sp/>the<sp/>implied<sp/>warranty<sp/>of</highlight></codeline>
-<codeline lineno="21"><highlight class="comment"><sp/><sp/>MERCHANTABILITY<sp/>or<sp/>FITNESS<sp/>FOR<sp/>A<sp/>PARTICULAR<sp/>PURPOSE.<sp/><sp/>See<sp/>the</highlight></codeline>
-<codeline lineno="22"><highlight class="comment"><sp/><sp/>GNU<sp/>General<sp/>Public<sp/>License<sp/>for<sp/>more<sp/>details.</highlight></codeline>
-<codeline lineno="23"><highlight class="comment"><sp/><sp/></highlight></codeline>
-<codeline lineno="24"><highlight class="comment"><sp/><sp/>You<sp/>should<sp/>have<sp/>received<sp/>a<sp/>copy<sp/>of<sp/>the<sp/>GNU<sp/>General<sp/>Public<sp/>License</highlight></codeline>
-<codeline lineno="25"><highlight class="comment"><sp/><sp/>along<sp/>with<sp/>this<sp/>program;<sp/>if<sp/>not,<sp/>write<sp/>to<sp/>the<sp/>Free<sp/>Software</highlight></codeline>
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-<codeline lineno="78"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_monot_cubic_interpolator_1abd5924a2e51068e10f5f412df9608db7" kindref="member">read</ref>(datafilename))<sp/>{<sp/></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">(</highlight><highlight class="stringliteral">&quot;Unable<sp/>to<sp/>constuct<sp/>MonotCubicInterpolator<sp/>from<sp/>file.&quot;</highlight><highlight class="normal">);<sp/></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_monot_cubic_interpolator_1a103ab96b6b68651eaaaa85180f4d88ac" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a103ab96b6b68651eaaaa85180f4d88ac" kindref="member">MonotCubicInterpolator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/>datafilename)</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_monot_cubic_interpolator_1abd5924a2e51068e10f5f412df9608db7" kindref="member">read</ref>(std::string(datafilename)))<sp/>{<sp/></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">(</highlight><highlight class="stringliteral">&quot;Unable<sp/>to<sp/>constuct<sp/>MonotCubicInterpolator<sp/>from<sp/>file.&quot;</highlight><highlight class="normal">);<sp/></highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115" refid="class_monot_cubic_interpolator_1acccc26f87c47ab6149ce14b91bff327c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_monot_cubic_interpolator_1acccc26f87c47ab6149ce14b91bff327c" kindref="member">MonotCubicInterpolator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/>datafilename,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>xColumn,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>fColumn)</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_monot_cubic_interpolator_1abd5924a2e51068e10f5f412df9608db7" kindref="member">read</ref>(std::string(datafilename),xColumn,fColumn))<sp/>{<sp/></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">(</highlight><highlight class="stringliteral">&quot;Unable<sp/>to<sp/>constuct<sp/>MonotCubicInterpolator<sp/>from<sp/>file.&quot;</highlight><highlight class="normal">);<sp/></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="130" refid="class_monot_cubic_interpolator_1ac9a3b7f50f24011576c6725dd62862ce" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_monot_cubic_interpolator_1ac9a3b7f50f24011576c6725dd62862ce" kindref="member">MonotCubicInterpolator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;<sp/>datafilename,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>xColumn,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>fColumn)</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_monot_cubic_interpolator_1abd5924a2e51068e10f5f412df9608db7" kindref="member">read</ref>(datafilename,xColumn,fColumn))<sp/>{<sp/></highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">(</highlight><highlight class="stringliteral">&quot;Unable<sp/>to<sp/>constuct<sp/>MonotCubicInterpolator<sp/>from<sp/>file.&quot;</highlight><highlight class="normal">);<sp/></highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="145" refid="class_monot_cubic_interpolator_1a9bac422d76d206f82b46cb971ae0fe41" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a9bac422d76d206f82b46cb971ae0fe41" kindref="member">MonotCubicInterpolator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;<sp/>&amp;<sp/>x<sp/>,<sp/></highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;<sp/>&amp;<sp/>f);</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="154" refid="class_monot_cubic_interpolator_1a9feb3521c6d339482c670c47c3273fab" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a9feb3521c6d339482c670c47c3273fab" kindref="member">MonotCubicInterpolator</ref>()<sp/>{;};</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="171" refid="class_monot_cubic_interpolator_1abd5924a2e51068e10f5f412df9608db7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1abd5924a2e51068e10f5f412df9608db7" kindref="member">read</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;<sp/>datafilename)<sp/>{</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1abd5924a2e51068e10f5f412df9608db7" kindref="member">read</ref>(datafilename,1,2);</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="183" refid="class_monot_cubic_interpolator_1a0d099337ab5d0f8b4d2c69ec6bcbc5a3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a0d099337ab5d0f8b4d2c69ec6bcbc5a3" kindref="member">read</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;<sp/><sp/>datafilename,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>xColumn,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>fColumn);<sp/></highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="198" refid="class_monot_cubic_interpolator_1a0958e5f35b2ce7a3694e39270086cc4e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a0958e5f35b2ce7a3694e39270086cc4e" kindref="member">operator () </ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1afa8df0327dfaba8d3b65819bff769e84" kindref="member">evaluate</ref>(x);<sp/>};</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="211" refid="class_monot_cubic_interpolator_1afa8df0327dfaba8d3b65819bff769e84" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1afa8df0327dfaba8d3b65819bff769e84" kindref="member">evaluate</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="232" refid="class_monot_cubic_interpolator_1a64df179fe82fd50dd0c9f9ea898b08a9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a64df179fe82fd50dd0c9f9ea898b08a9" kindref="member">evaluate</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;<sp/>errorestimate_output<sp/>)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;<sp/></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="240" refid="class_monot_cubic_interpolator_1a1494736ec67ea38a483117199f829937" refkind="member"><highlight class="normal"><sp/><sp/>std::pair&lt;double,double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1a1494736ec67ea38a483117199f829937" kindref="member">getMinimumX</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Easy<sp/>since<sp/>the<sp/>data<sp/>is<sp/>sorted<sp/>on<sp/>x:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*<ref refid="class_monot_cubic_interpolator_1a664653849fba0adff687da21f92a2c50" kindref="member">data</ref>.begin();</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="251" refid="class_monot_cubic_interpolator_1a6010fb0559add5a4caa5d2ecf7fb4ffb" refkind="member"><highlight class="normal"><sp/><sp/>std::pair&lt;double,double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1a6010fb0559add5a4caa5d2ecf7fb4ffb" kindref="member">getMaximumX</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Easy<sp/>since<sp/>the<sp/>data<sp/>is<sp/>sorted<sp/>on<sp/>x:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*<ref refid="class_monot_cubic_interpolator_1a664653849fba0adff687da21f92a2c50" kindref="member">data</ref>.rbegin();</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="262" refid="class_monot_cubic_interpolator_1a9be851a504df8e804b71ab35616fcc82" refkind="member"><highlight class="normal"><sp/><sp/>std::pair&lt;double,double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1a9be851a504df8e804b71ab35616fcc82" kindref="member">getMaximumF</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="270" refid="class_monot_cubic_interpolator_1a86d17f00caba1a7cf148ba9a04a33281" refkind="member"><highlight class="normal"><sp/><sp/>std::pair&lt;double,double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1a86d17f00caba1a7cf148ba9a04a33281" kindref="member">getMinimumF</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="280" refid="class_monot_cubic_interpolator_1ada1414008545d4c514dc4576d6907b1b" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1ada1414008545d4c514dc4576d6907b1b" kindref="member">get_xVector</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="290" refid="class_monot_cubic_interpolator_1a7c7bb0b934bc26781b004f071bc46b3b" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1a7c7bb0b934bc26781b004f071bc46b3b" kindref="member">get_fVector</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="297" refid="class_monot_cubic_interpolator_1a28f4640da98b82b087e74732c620f3f0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a28f4640da98b82b087e74732c620f3f0" kindref="member">scaleData</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>factor);</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="306" refid="class_monot_cubic_interpolator_1afd775edd1e48b05532f912fb830501c7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1afd775edd1e48b05532f912fb830501c7" kindref="member">isStrictlyMonotone</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">/*<sp/>Use<sp/>cached<sp/>value<sp/>if<sp/>it<sp/>can<sp/>be<sp/>trusted<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1af4f7e31f8a86f4d74ef78545da881d0f" kindref="member">strictlyMonotoneCached</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a7f47c10641aec29b07f610bdc8d3d697" kindref="member">strictlyMonotone</ref>;</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37" kindref="member">computeInternalFunctionData</ref>();</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a7f47c10641aec29b07f610bdc8d3d697" kindref="member">strictlyMonotone</ref>;</highlight></codeline>
-<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="323" refid="class_monot_cubic_interpolator_1a9302b07699db98f262d530834688a306" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a9302b07699db98f262d530834688a306" kindref="member">isMonotone</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1abccf505d969bf6761287a05c02fb231d" kindref="member">monotoneCached</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a1eb76f1770400c38473661c50d1bcd86" kindref="member">monotone</ref>;</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37" kindref="member">computeInternalFunctionData</ref>();</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a1eb76f1770400c38473661c50d1bcd86" kindref="member">monotone</ref>;</highlight></codeline>
-<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="331"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="339" refid="class_monot_cubic_interpolator_1afde66e6c4fd72a3c8b07e4396cc949d0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1afde66e6c4fd72a3c8b07e4396cc949d0" kindref="member">isStrictlyIncreasing</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">/*<sp/>Use<sp/>cached<sp/>value<sp/>if<sp/>it<sp/>can<sp/>be<sp/>trusted<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1af4f7e31f8a86f4d74ef78545da881d0f" kindref="member">strictlyMonotoneCached</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1a7f47c10641aec29b07f610bdc8d3d697" kindref="member">strictlyMonotone</ref><sp/>&amp;&amp;<sp/><ref refid="class_monot_cubic_interpolator_1a090fcf67aab0e92482256eef3a5db244" kindref="member">strictlyIncreasing</ref>);</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37" kindref="member">computeInternalFunctionData</ref>();</highlight></codeline>
-<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1a7f47c10641aec29b07f610bdc8d3d697" kindref="member">strictlyMonotone</ref><sp/>&amp;&amp;<sp/><ref refid="class_monot_cubic_interpolator_1a090fcf67aab0e92482256eef3a5db244" kindref="member">strictlyIncreasing</ref>);</highlight></codeline>
-<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="350"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="356" refid="class_monot_cubic_interpolator_1a8b7fcc56aa55c4d47b67ede95f2bf721" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a8b7fcc56aa55c4d47b67ede95f2bf721" kindref="member">isMonotoneIncreasing</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1abccf505d969bf6761287a05c02fb231d" kindref="member">monotoneCached</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1a1eb76f1770400c38473661c50d1bcd86" kindref="member">monotone</ref><sp/>&amp;&amp;<sp/><ref refid="class_monot_cubic_interpolator_1aa0fd1dd1ed5a2170c6a87102a34f124f" kindref="member">increasing</ref>);</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37" kindref="member">computeInternalFunctionData</ref>();</highlight></codeline>
-<codeline lineno="362"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1a1eb76f1770400c38473661c50d1bcd86" kindref="member">monotone</ref><sp/>&amp;&amp;<sp/><ref refid="class_monot_cubic_interpolator_1aa0fd1dd1ed5a2170c6a87102a34f124f" kindref="member">increasing</ref>);</highlight></codeline>
-<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="372" refid="class_monot_cubic_interpolator_1a050b5c4031ad3be6c63a930ee32d3c30" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a050b5c4031ad3be6c63a930ee32d3c30" kindref="member">isStrictlyDecreasing</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">/*<sp/>Use<sp/>cached<sp/>value<sp/>if<sp/>it<sp/>can<sp/>be<sp/>trusted<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1af4f7e31f8a86f4d74ef78545da881d0f" kindref="member">strictlyMonotoneCached</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1a7f47c10641aec29b07f610bdc8d3d697" kindref="member">strictlyMonotone</ref><sp/>&amp;&amp;<sp/><ref refid="class_monot_cubic_interpolator_1adecf61c001c3f9b3293bfebf1bd5edca" kindref="member">strictlyDecreasing</ref>);</highlight></codeline>
-<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37" kindref="member">computeInternalFunctionData</ref>();</highlight></codeline>
-<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1a7f47c10641aec29b07f610bdc8d3d697" kindref="member">strictlyMonotone</ref><sp/>&amp;&amp;<sp/><ref refid="class_monot_cubic_interpolator_1adecf61c001c3f9b3293bfebf1bd5edca" kindref="member">strictlyDecreasing</ref>);</highlight></codeline>
-<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="389" refid="class_monot_cubic_interpolator_1a6d7ea3c296303c255e485c083ec5a76a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a6d7ea3c296303c255e485c083ec5a76a" kindref="member">isMonotoneDecreasing</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1abccf505d969bf6761287a05c02fb231d" kindref="member">monotoneCached</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1a1eb76f1770400c38473661c50d1bcd86" kindref="member">monotone</ref><sp/>&amp;&amp;<sp/><ref refid="class_monot_cubic_interpolator_1ae62d5b8ddd32a797a58f8f331a3e3147" kindref="member">decreasing</ref>);</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37" kindref="member">computeInternalFunctionData</ref>();</highlight></codeline>
-<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_monot_cubic_interpolator_1a1eb76f1770400c38473661c50d1bcd86" kindref="member">monotone</ref><sp/>&amp;&amp;<sp/><ref refid="class_monot_cubic_interpolator_1ae62d5b8ddd32a797a58f8f331a3e3147" kindref="member">decreasing</ref>);</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="397"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="399"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="400"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="414" refid="class_monot_cubic_interpolator_1a752222ba7fe035ce6b64c5874bc0758e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a752222ba7fe035ce6b64c5874bc0758e" kindref="member">addPair</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>newx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>newf);</highlight></codeline>
-<codeline lineno="415"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="428" refid="class_monot_cubic_interpolator_1a16b99f4c0757cc6957d9a1b8da9cf03a" refkind="member"><highlight class="normal"><sp/><sp/>std::pair&lt;double,double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1a16b99f4c0757cc6957d9a1b8da9cf03a" kindref="member">getMissingX</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="429"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="435" refid="class_monot_cubic_interpolator_1a37150b71b5453de787f9e9185e7e41e5" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_monot_cubic_interpolator_1a37150b71b5453de787f9e9185e7e41e5" kindref="member">toString</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="436"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="440" refid="class_monot_cubic_interpolator_1a7e51d95079f77bb617feeacd12eee26e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a7e51d95079f77bb617feeacd12eee26e" kindref="member">getSize</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a664653849fba0adff687da21f92a2c50" kindref="member">data</ref>.size();</highlight></codeline>
-<codeline lineno="442"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="443"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="463" refid="class_monot_cubic_interpolator_1a91de72bd2bff6f7d3bf0b5b82002ccd4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a91de72bd2bff6f7d3bf0b5b82002ccd4" kindref="member">chopFlatEndpoints</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="464"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="469" refid="class_monot_cubic_interpolator_1a71f51d09499f535c0892fc186e97b4f5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a71f51d09499f535c0892fc186e97b4f5" kindref="member">chopFlatEndpoints</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="470"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_monot_cubic_interpolator_1a71f51d09499f535c0892fc186e97b4f5" kindref="member">chopFlatEndpoints</ref>(1e-14);</highlight></codeline>
-<codeline lineno="471"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="472"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="487" refid="class_monot_cubic_interpolator_1ae9cd95952a0251fe8c44ab8305ed1a1e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1ae9cd95952a0251fe8c44ab8305ed1a1e" kindref="member">shrinkFlatAreas</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="488"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="493" refid="class_monot_cubic_interpolator_1afec063b4c7537300ed99905d025c0ef6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1afec063b4c7537300ed99905d025c0ef6" kindref="member">shrinkFlatAreas</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="494"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_monot_cubic_interpolator_1afec063b4c7537300ed99905d025c0ef6" kindref="member">shrinkFlatAreas</ref>(1e-14);</highlight></codeline>
-<codeline lineno="495"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="496"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="497"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="498"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="499"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="500"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="501"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Data<sp/>structure<sp/>to<sp/>store<sp/>x-<sp/>and<sp/>f-values</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="502" refid="class_monot_cubic_interpolator_1a664653849fba0adff687da21f92a2c50" refkind="member"><highlight class="normal"><sp/><sp/>std::map&lt;double,<sp/>double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1a664653849fba0adff687da21f92a2c50" kindref="member">data</ref>;</highlight></codeline>
-<codeline lineno="503"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="504"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Data<sp/>structure<sp/>to<sp/>store<sp/>x-<sp/>and<sp/>d-values</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="505" refid="class_monot_cubic_interpolator_1a642373d6467598df56ef0e213f9cc7e7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/>std::map&lt;double,<sp/>double&gt;<sp/><ref refid="class_monot_cubic_interpolator_1a642373d6467598df56ef0e213f9cc7e7" kindref="member">ddata</ref>;<sp/><sp/></highlight></codeline>
-<codeline lineno="506"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="507"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="508"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Storage<sp/>containers<sp/>for<sp/>precomputed<sp/>interpolation<sp/>data</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="509"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/>std::vector&lt;double&gt;<sp/>dvalues;<sp/>//<sp/>derivatives<sp/>in<sp/>Hermite<sp/>interpolation.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="510"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="511"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Flag<sp/>to<sp/>determine<sp/>whether<sp/>the<sp/>boolean<sp/>strictlyMonotone<sp/>can<sp/>be</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="512"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>trusted.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="513" refid="class_monot_cubic_interpolator_1af4f7e31f8a86f4d74ef78545da881d0f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1af4f7e31f8a86f4d74ef78545da881d0f" kindref="member">strictlyMonotoneCached</ref>;</highlight></codeline>
-<codeline lineno="514" refid="class_monot_cubic_interpolator_1abccf505d969bf6761287a05c02fb231d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1abccf505d969bf6761287a05c02fb231d" kindref="member">monotoneCached</ref>;<sp/></highlight><highlight class="comment">/*<sp/>only<sp/>monotone,<sp/>not<sp/>stricly<sp/>montone<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="515"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="516" refid="class_monot_cubic_interpolator_1a7f47c10641aec29b07f610bdc8d3d697" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a7f47c10641aec29b07f610bdc8d3d697" kindref="member">strictlyMonotone</ref>;</highlight></codeline>
-<codeline lineno="517" refid="class_monot_cubic_interpolator_1a1eb76f1770400c38473661c50d1bcd86" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a1eb76f1770400c38473661c50d1bcd86" kindref="member">monotone</ref>;</highlight></codeline>
-<codeline lineno="518"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="519"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>if<sp/>strictlyMonotone<sp/>is<sp/>true<sp/>(and<sp/>can<sp/>be<sp/>trusted),<sp/>the<sp/>two<sp/>next<sp/>are<sp/>meaningful</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="520" refid="class_monot_cubic_interpolator_1adecf61c001c3f9b3293bfebf1bd5edca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1adecf61c001c3f9b3293bfebf1bd5edca" kindref="member">strictlyDecreasing</ref>;</highlight></codeline>
-<codeline lineno="521" refid="class_monot_cubic_interpolator_1a090fcf67aab0e92482256eef3a5db244" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a090fcf67aab0e92482256eef3a5db244" kindref="member">strictlyIncreasing</ref>;</highlight></codeline>
-<codeline lineno="522" refid="class_monot_cubic_interpolator_1ae62d5b8ddd32a797a58f8f331a3e3147" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1ae62d5b8ddd32a797a58f8f331a3e3147" kindref="member">decreasing</ref>;</highlight></codeline>
-<codeline lineno="523" refid="class_monot_cubic_interpolator_1aa0fd1dd1ed5a2170c6a87102a34f124f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">mutable</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1aa0fd1dd1ed5a2170c6a87102a34f124f" kindref="member">increasing</ref>;</highlight></codeline>
-<codeline lineno="524"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="525"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="526"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">/*<sp/>Hermite<sp/>basis<sp/>functions,<sp/>t<sp/>\in<sp/>[0,1]<sp/>,</highlight></codeline>
-<codeline lineno="527"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>notation<sp/>from:</highlight></codeline>
-<codeline lineno="528"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>http://en.wikipedia.org/w/index.php?title=Cubic_Hermite_spline&amp;oldid=84495502</highlight></codeline>
-<codeline lineno="529"><highlight class="comment"><sp/><sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="530"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="531" refid="class_monot_cubic_interpolator_1a8cdadccef9cb6675ff25c9339346dee2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a8cdadccef9cb6675ff25c9339346dee2" kindref="member">H00</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="532"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2*t*t*t<sp/>-<sp/>3*t*t<sp/>+<sp/>1;</highlight></codeline>
-<codeline lineno="533"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="534" refid="class_monot_cubic_interpolator_1a56b2c59c4a6d29928ac7924097d23844" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a56b2c59c4a6d29928ac7924097d23844" kindref="member">H10</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="535"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>t*t*t<sp/>-<sp/>2*t*t<sp/>+<sp/>t;</highlight></codeline>
-<codeline lineno="536"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="537" refid="class_monot_cubic_interpolator_1a5396824ca0482d00a29b72a550155a96" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a5396824ca0482d00a29b72a550155a96" kindref="member">H01</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="538"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-2*t*t*t<sp/>+<sp/>3*t*t;</highlight></codeline>
-<codeline lineno="539"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="540" refid="class_monot_cubic_interpolator_1ab92f6967f6e6a750816e974d2ece5348" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1ab92f6967f6e6a750816e974d2ece5348" kindref="member">H11</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="541"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>t*t*t<sp/>-<sp/>t*t;</highlight></codeline>
-<codeline lineno="542"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="543"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="544"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="545" refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37" kindref="member">computeInternalFunctionData</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="546"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="554" refid="class_monot_cubic_interpolator_1a01333da09996298258f6ce9d47cb128c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a01333da09996298258f6ce9d47cb128c" kindref="member">computeSimpleDerivatives</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="555"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="556"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="563" refid="class_monot_cubic_interpolator_1a11a59bc51ddfd431869ced297e1b3eb0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a11a59bc51ddfd431869ced297e1b3eb0" kindref="member">adjustDerivativesForMonotoneness</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="564"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="574" refid="class_monot_cubic_interpolator_1a5b486f66fd61a841fc639416da6e3411" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_monot_cubic_interpolator_1a5b486f66fd61a841fc639416da6e3411" kindref="member">isMonotoneCoeff</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>alpha,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>beta)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="575"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>((alpha*alpha<sp/>+<sp/>beta*beta)<sp/>&lt;=<sp/>9)<sp/>{</highlight></codeline>
-<codeline lineno="576"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="577"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="578"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="579"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="580"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="581"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="582"><highlight class="normal">};<sp/></highlight></codeline>
-<codeline lineno="583"><highlight class="normal"></highlight></codeline>
-<codeline lineno="584"><highlight class="normal"></highlight></codeline>
-<codeline lineno="585"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_n_v_t_x_8_h.xml b/doxyxml/_n_v_t_x_8_h.xml
deleted file mode 100644
index 46a9ad8..0000000
--- a/doxyxml/_n_v_t_x_8_h.xml
+++ /dev/null
@@ -1,155 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_n_v_t_x_8_h" kind="file" language="C++">
-    <compoundname>NVTX.H</compoundname>
-    <includes local="no">memory</includes>
-    <includes local="no">config_exp.h</includes>
-    <includedby refid="_cyl_two_d_8_h" local="no">/home/weinberg/Projects/EXP/src/CylTwoD.H</includedby>
-    <includedby refid="_polar_basis_8_h" local="no">/home/weinberg/Projects/EXP/src/PolarBasis.H</includedby>
-    <includedby refid="_spherical_basis_8_h" local="no">/home/weinberg/Projects/EXP/src/SphericalBasis.H</includedby>
-    <incdepgraph>
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-      <node id="4">
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-        <link refid="_c_b_disk_8_h"/>
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-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="9">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/FlatDisk.H</label>
-        <link refid="_flat_disk_8_h"/>
-      </node>
-      <node id="10">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/NVTX.H</label>
-        <link refid="_n_v_t_x_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/src/PolarBasis.H</label>
-        <link refid="_polar_basis_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>/home/weinberg/Projects/EXP/src/Sphere.H</label>
-        <link refid="_sphere_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/SphericalBasis.H</label>
-        <link refid="_spherical_basis_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/src/TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="classnv_tracer" prot="public">nvTracer</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="_n_v_t_x_8_h_1a31a371410753045ab3817221bb7f609b" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="classnv_tracer" kindref="compound">nvTracer</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;nvTracer&gt; nvTracerPtr</definition>
-        <argsstring></argsstring>
-        <name>nvTracerPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/NVTX.H" line="35" column="25" bodyfile="/home/weinberg/Projects/EXP/src/NVTX.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>NVTX_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>NVTX_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>__CUDACC_VER_MAJOR__<sp/>&lt;<sp/>12</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;nvToolsExt.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;nvtx3/nvToolsExt.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classnv_tracer" kindref="compound">nvTracer</ref><sp/>{</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>count;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><ref refid="classnv_tracer" kindref="compound">nvTracer</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/>name);</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><ref refid="classnv_tracer_1af34ae43cbed9a9a6f3926db6eb8a2727" kindref="member">~nvTracer</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/>nvtxRangePop();</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="26"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="classnv_tracer" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classnv_tracer" kindref="compound">nvTracer</ref><sp/>{</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="30" refid="classnv_tracer_1ad46dfd2b94d3bbbe30cf39778b8b5023" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classnv_tracer_1ad46dfd2b94d3bbbe30cf39778b8b5023" kindref="member">nvTracer</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/>name)<sp/>{}</highlight></codeline>
-<codeline lineno="31" refid="classnv_tracer_1af34ae43cbed9a9a6f3926db6eb8a2727" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classnv_tracer_1af34ae43cbed9a9a6f3926db6eb8a2727" kindref="member">~nvTracer</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="32"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="_n_v_t_x_8_h_1a31a371410753045ab3817221bb7f609b" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;nvTracer&gt;<sp/><ref refid="_n_v_t_x_8_h_1a31a371410753045ab3817221bb7f609b" kindref="member">nvTracerPtr</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/NVTX.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_no_force_8_h.xml b/doxyxml/_no_force_8_h.xml
deleted file mode 100644
index 2c0b179..0000000
--- a/doxyxml/_no_force_8_h.xml
+++ /dev/null
@@ -1,128 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_no_force_8_h" kind="file" language="C++">
-    <compoundname>NoForce.H</compoundname>
-    <includes local="no">string</includes>
-    <includes refid="_pot_accel_8_h" local="no">PotAccel.H</includes>
-    <incdepgraph>
-      <node id="11">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="12">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/NoForce.H</label>
-        <link refid="_no_force_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
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-        <childnode refid="7" relation="include">
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-        <childnode refid="8" relation="include">
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-        <childnode refid="9" relation="include">
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-        <childnode refid="11" relation="include">
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-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>Particle.H</label>
-      </node>
-      <node id="5">
-        <label>chrono</label>
-      </node>
-      <node id="14">
-        <label>config_exp.h</label>
-      </node>
-      <node id="4">
-        <label>cstdlib</label>
-      </node>
-      <node id="6">
-        <label>list</label>
-      </node>
-      <node id="7">
-        <label>map</label>
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-        <label>memory</label>
-      </node>
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-        <label>set</label>
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-      <node id="2">
-        <label>string</label>
-      </node>
-      <node id="9">
-        <label>yaml-cpp/yaml.h</label>
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-    </incdepgraph>
-    <innerclass refid="class_no_force" prot="public">NoForce</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_NoForce_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_NoForce_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_pot_accel_8_h" kindref="compound">PotAccel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_no_force" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_no_force" kindref="compound">NoForce</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel" kindref="compound">PotAccel</ref></highlight></codeline>
-<codeline lineno="16"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_no_force_1a361db5a4e98f0fdd9d6948f1e6f92a3a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_no_force_1a361db5a4e98f0fdd9d6948f1e6f92a3a" kindref="member">initialize</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="22" refid="class_no_force_1a80e706be89887dea929ae9d836c01fde" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_no_force_1a80e706be89887dea929ae9d836c01fde" kindref="member">determine_acceleration_and_potential</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{}</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_no_force_1a5601e2a9756b33aa0e49f0de9e4d2be6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_no_force_1a5601e2a9756b33aa0e49f0de9e4d2be6" kindref="member">~NoForce</ref>();</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/NoForce.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_orb_trace_8_h.xml b/doxyxml/_orb_trace_8_h.xml
deleted file mode 100644
index 96a6483..0000000
--- a/doxyxml/_orb_trace_8_h.xml
+++ /dev/null
@@ -1,73 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_orb_trace_8_h" kind="file" language="C++">
-    <compoundname>OrbTrace.H</compoundname>
-    <includes refid="_orb_trace_8_h" local="no">OrbTrace.H</includes>
-    <includedby refid="_orb_trace_8_h" local="no">/home/weinberg/Projects/EXP/src/OrbTrace.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OrbTrace.H</label>
-        <link refid="_orb_trace_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OrbTrace.H</label>
-        <link refid="_orb_trace_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_orb_trace" prot="public">OrbTrace</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OrbTrace_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OrbTrace_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_orb_trace_8_h" kindref="compound">OrbTrace.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_orb_trace" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_orb_trace" kindref="compound">OrbTrace</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
-<codeline lineno="32"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_orb_trace_1a4904b82695586154193df5b0f6129813" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_orb_trace_1a4904b82695586154193df5b0f6129813" kindref="member">filename</ref>;</highlight></codeline>
-<codeline lineno="37" refid="class_orb_trace_1afc27d67b14b6848651f7945db5a12a3d" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_orb_trace_1afc27d67b14b6848651f7945db5a12a3d" kindref="member">orbitlist</ref>;</highlight></codeline>
-<codeline lineno="38" refid="class_orb_trace_1acc7654d19c49c359053e496b0593c6f6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1acc7654d19c49c359053e496b0593c6f6" kindref="member">nbeg</ref>;</highlight></codeline>
-<codeline lineno="39" refid="class_orb_trace_1a0a0b568e0454aeb89a05f97a543e5e3e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1a0a0b568e0454aeb89a05f97a543e5e3e" kindref="member">nskip</ref>;</highlight></codeline>
-<codeline lineno="40" refid="class_orb_trace_1abf316253b26847e999d98d0a8d0ff04a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1abf316253b26847e999d98d0a8d0ff04a" kindref="member">norb</ref>;</highlight></codeline>
-<codeline lineno="41" refid="class_orb_trace_1af4fcce1c4fd3ec56be003324de2ce5cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1af4fcce1c4fd3ec56be003324de2ce5cf" kindref="member">use_acc</ref>;</highlight></codeline>
-<codeline lineno="42" refid="class_orb_trace_1a366b9fbd3ef9d63a214b55478ad6d2cc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1a366b9fbd3ef9d63a214b55478ad6d2cc" kindref="member">use_pot</ref>;</highlight></codeline>
-<codeline lineno="43" refid="class_orb_trace_1afd7bb20f6d3544e374c74ca048dccdaa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1afd7bb20f6d3544e374c74ca048dccdaa" kindref="member">use_lev</ref>;</highlight></codeline>
-<codeline lineno="44" refid="class_orb_trace_1a836db57c795ff64325f6f016249fb801" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1a836db57c795ff64325f6f016249fb801" kindref="member">local</ref>;</highlight></codeline>
-<codeline lineno="45" refid="class_orb_trace_1a7e25ecf48de34e047dfd4b5c361afd5c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component" kindref="compound">Component</ref><sp/>*<ref refid="class_orb_trace_1a7e25ecf48de34e047dfd4b5c361afd5c" kindref="member">tcomp</ref>;</highlight></codeline>
-<codeline lineno="46" refid="class_orb_trace_1a56daf771e7356b67c8d6639de918637e" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;int&gt;<sp/><ref refid="class_orb_trace_1a56daf771e7356b67c8d6639de918637e" kindref="member">orblist</ref>;</highlight></codeline>
-<codeline lineno="47" refid="class_orb_trace_1a8213236086651a4f9574c91b1c75e098" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_orb_trace_1a8213236086651a4f9574c91b1c75e098" kindref="member">pbuf</ref>;</highlight></codeline>
-<codeline lineno="48" refid="class_orb_trace_1a193d912a01938bb111c04daee5131598" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1a193d912a01938bb111c04daee5131598" kindref="member">nbuf</ref>;</highlight></codeline>
-<codeline lineno="49" refid="class_orb_trace_1a9779dc75badc9fd5b2b044ba4f218623" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1a9779dc75badc9fd5b2b044ba4f218623" kindref="member">flags</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_orb_trace_1addb52f79a730401e20c59e6e9abe943a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1addb52f79a730401e20c59e6e9abe943a" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_orb_trace_1a58efd5f23f71863e2c18213fdd250d88" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_orb_trace_1a58efd5f23f71863e2c18213fdd250d88" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57" refid="class_orb_trace_1a83edfa294246b0a4cd87a2cd1d34f534" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1a83edfa294246b0a4cd87a2cd1d34f534" kindref="member">prev</ref><sp/>=<sp/>-std::numeric_limits&lt;double&gt;::max();</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_orb_trace_1a67780b3cad38f5b4b6662c56cad56a3f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_orb_trace_1a67780b3cad38f5b4b6662c56cad56a3f" kindref="member">OrbTrace</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_orb_trace_1a885467d6278216bc2e46a3c8424c4b6c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_orb_trace_1a885467d6278216bc2e46a3c8424c4b6c" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_orient_8_h.xml b/doxyxml/_orient_8_h.xml
deleted file mode 100644
index f27669a..0000000
--- a/doxyxml/_orient_8_h.xml
+++ /dev/null
@@ -1,443 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_orient_8_h" kind="file" language="C++">
-    <compoundname>Orient.H</compoundname>
-    <includes local="no">vector</includes>
-    <includes local="no">set</includes>
-    <includes local="no">deque</includes>
-    <includes local="no">algorithm</includes>
-    <includes refid="euler_8_h" local="no">euler.H</includes>
-    <includes local="no">Particle.H</includes>
-    <includes refid="_pseudo_accel_8_h" local="no">PseudoAccel.H</includes>
-    <includes local="no">config_exp.h</includes>
-    <includedby refid="_component_8_h" local="no">/home/weinberg/Projects/EXP/src/Component.H</includedby>
-    <includedby refid="_cyl_two_d_8_h" local="no">/home/weinberg/Projects/EXP/src/CylTwoD.H</includedby>
-    <includedby refid="_cylinder_8_h" local="no">/home/weinberg/Projects/EXP/src/Cylinder.H</includedby>
-    <incdepgraph>
-      <node id="9">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/Orient.H</label>
-        <link refid="_orient_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
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-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
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-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="8">
-        <label>Particle.H</label>
-      </node>
-      <node id="5">
-        <label>algorithm</label>
-      </node>
-      <node id="10">
-        <label>array</label>
-      </node>
-      <node id="15">
-        <label>config_exp.h</label>
-      </node>
-      <node id="4">
-        <label>deque</label>
-      </node>
-      <node id="13">
-        <label>iomanip</label>
-      </node>
-      <node id="12">
-        <label>iostream</label>
-      </node>
-      <node id="3">
-        <label>set</label>
-      </node>
-      <node id="14">
-        <label>tuple</label>
-      </node>
-      <node id="2">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/src/Component.H</label>
-        <link refid="_component_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/src/ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>/home/weinberg/Projects/EXP/src/CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="16">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="18">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/src/ExternalCollection.H</label>
-        <link refid="_external_collection_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
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-        <childnode refid="7" relation="include">
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-        <childnode refid="8" relation="include">
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-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="21">
-        <label>/home/weinberg/Projects/EXP/src/ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
-        <childnode refid="4" relation="include">
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-        <childnode refid="22" relation="include">
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-        <childnode refid="24" relation="include">
-        </childnode>
-      </node>
-      <node id="22">
-        <label>/home/weinberg/Projects/EXP/src/HaloBulge.H</label>
-        <link refid="_halo_bulge_8_h"/>
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-      <node id="19">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
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-<codeline lineno="114" refid="class_orient_1a25dc109bf488f4cf78e1208f6e198eda" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a25dc109bf488f4cf78e1208f6e198eda" kindref="member">logfile</ref>;</highlight></codeline>
-<codeline lineno="115" refid="class_orient_1a4b1088387f9d9cc2ccfd2082a5410fdc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a4b1088387f9d9cc2ccfd2082a5410fdc" kindref="member">linear</ref>;</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="117" refid="class_orient_1a3c2620c2dd967b5ee26eafe5ba3abb18" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_orient_1a3c2620c2dd967b5ee26eafe5ba3abb18" kindref="member">pos</ref>,<sp/><ref refid="class_orient_1a70af3b9f2042db78043be7b8693f5b97" kindref="member">psa</ref>,<sp/><ref refid="class_orient_1a37a9fae59c55d4e4a808f7b69ac634b9" kindref="member">vel</ref>;</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="119" refid="class_orient_1aae522c2f57d3dc55cfc623af0eb95f33" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;PseudoAccel&gt;<sp/><ref refid="class_orient_1aae522c2f57d3dc55cfc623af0eb95f33" kindref="member">accel</ref>;</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121" refid="class_orient_1a333f3ce67df7508c31241998328e106b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a333f3ce67df7508c31241998328e106b" kindref="member">accumulate_cpu</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>time,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c);</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>accumulate_gpu(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>time,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c);</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="128" refid="class_orient_1ac11a69e8024f1092460e9f969d273596a238ddc83b278efbb4d2696b60a8a7059" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_orient_1ac11a69e8024f1092460e9f969d273596" kindref="member">OrientFlags</ref><sp/>{<ref refid="class_orient_1ac11a69e8024f1092460e9f969d273596a238ddc83b278efbb4d2696b60a8a7059" kindref="member">AXIS</ref>=1,<sp/><ref refid="class_orient_1ac11a69e8024f1092460e9f969d273596a5bc52ef920db5ed1929af96ce023dacb" kindref="member">CENTER</ref>=2};</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="131" refid="class_orient_1ab5d37af72a85b76b2227627b490116f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_orient_1ab5d37af72a85b76b2227627b490116f2" kindref="member">ControlFlags</ref><sp/>{<ref refid="class_orient_1ab5d37af72a85b76b2227627b490116f2a9bea29023577cfecab897fb1bf4efea4" kindref="member">DIAG</ref>=1,<sp/><ref refid="class_orient_1ab5d37af72a85b76b2227627b490116f2a56390961a62625218e91702d63bbf041" kindref="member">KE</ref>=2,<sp/><ref refid="class_orient_1ab5d37af72a85b76b2227627b490116f2aae9a4f491c8a858c01522c38c0fb6e86" kindref="member">EXTERNAL</ref>=4};</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="134" refid="class_orient_1ae40302e5cfa6dc14e1b7cb5d4977d93a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_orient_1ae40302e5cfa6dc14e1b7cb5d4977d93a" kindref="member">Orient</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>number_to_keep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>target,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Naccel,</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>orient_flags,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>control_flags,<sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a25dc109bf488f4cf78e1208f6e198eda" kindref="member">logfile</ref>,</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dt=0.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>damping=1.0);</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="139" refid="class_orient_1ade8e8e2be43f17d2550539575c24cab9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_orient_1ade8e8e2be43f17d2550539575c24cab9" kindref="member">~Orient</ref>();</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="142" refid="class_orient_1aab4939d097ff48294805c98a625fc2a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_orient_1aab4939d097ff48294805c98a625fc2a4" kindref="member">set_center</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_orient_1a0e0c27e1f35f0156e18febc3b6bbd2e4" kindref="member">center</ref>[0]<sp/>=<sp/><ref refid="class_orient_1a36f1ade07be9d350eac5597c384af7a5" kindref="member">center0</ref>[0]<sp/>=<sp/>x;</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_orient_1a0e0c27e1f35f0156e18febc3b6bbd2e4" kindref="member">center</ref>[1]<sp/>=<sp/><ref refid="class_orient_1a36f1ade07be9d350eac5597c384af7a5" kindref="member">center0</ref>[1]<sp/>=<sp/>y;</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_orient_1a0e0c27e1f35f0156e18febc3b6bbd2e4" kindref="member">center</ref>[2]<sp/>=<sp/><ref refid="class_orient_1a36f1ade07be9d350eac5597c384af7a5" kindref="member">center0</ref>[2]<sp/>=<sp/>z;</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="149" refid="class_orient_1a16b6bc7639a7bc3888e57ddc6d2aed23" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a16b6bc7639a7bc3888e57ddc6d2aed23" kindref="member">set_cenvel</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>u,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>v,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>w)<sp/>{</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_orient_1ade6f7629954efbf54fa1824f5095d54b" kindref="member">cenvel0</ref>[0]<sp/>=<sp/>u;</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_orient_1ade6f7629954efbf54fa1824f5095d54b" kindref="member">cenvel0</ref>[1]<sp/>=<sp/>v;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_orient_1ade6f7629954efbf54fa1824f5095d54b" kindref="member">cenvel0</ref>[2]<sp/>=<sp/>w;</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="156" refid="class_orient_1ac7560513b2547f3bb788cb98368a34f3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_orient_1ac7560513b2547f3bb788cb98368a34f3" kindref="member">logEntry</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>time,<sp/><ref refid="class_component" kindref="compound">Component</ref><sp/>*c);</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="159" refid="class_orient_1a1c8fb4529d57d33dd60ec4e4e3318394" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a1c8fb4529d57d33dd60ec4e4e3318394" kindref="member">set_linear</ref>()<sp/>{<sp/><ref refid="class_orient_1a4b1088387f9d9cc2ccfd2082a5410fdc" kindref="member">linear</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="162" refid="class_orient_1a248c5cab4353d1e0e479d3a5a5ee786e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a248c5cab4353d1e0e479d3a5a5ee786e" kindref="member">accumulate</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>time,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c);</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="165" refid="class_orient_1a7c8daade94aabf07737c7ef20ba3358b" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Matrix3d&amp;<sp/><ref refid="class_orient_1a7c8daade94aabf07737c7ef20ba3358b" kindref="member">transformBody</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1acec1058ed4797b77efa21e8f87696386" kindref="member">body</ref>;};</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="168" refid="class_orient_1a16619422febe1574aa86d402d65a4594" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Matrix3d&amp;<sp/><ref refid="class_orient_1a16619422febe1574aa86d402d65a4594" kindref="member">transformOrig</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1afcdb5ceb334f569702d848df957f9803" kindref="member">orig</ref>;};</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="171" refid="class_orient_1abd75e9d427721004de6b7ae615767259" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d&amp;<sp/><ref refid="class_orient_1abd75e9d427721004de6b7ae615767259" kindref="member">currentAxis</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1ab517af8a0cade5f03a44dd47c663a6e2" kindref="member">axis</ref>;};</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="174" refid="class_orient_1aa97d11652158f43075e70f1b43654c84" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d&amp;<sp/><ref refid="class_orient_1aa97d11652158f43075e70f1b43654c84" kindref="member">currentCenter</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a0e0c27e1f35f0156e18febc3b6bbd2e4" kindref="member">center</ref>;};</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::tuple&lt;Eigen::Vector3d&amp;,<sp/>Eigen::Vector3d&amp;,<sp/>Eigen::Vector3d&amp;&gt;</highlight></codeline>
-<codeline lineno="179" refid="class_orient_1a2aaecf7e96749b9f1f89b61a6f1218f7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_orient_1a2aaecf7e96749b9f1f89b61a6f1218f7" kindref="member">currentAccel</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_orient_1aae522c2f57d3dc55cfc623af0eb95f33" kindref="member">accel</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_orient_1aae522c2f57d3dc55cfc623af0eb95f33" kindref="member">accel</ref>)();</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_orient_1a92e4cf917f9bc05b829012aa70ec173c" kindref="member">pseudo</ref>.setZero();<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>No<sp/>acceleration<sp/>or<sp/>angular<sp/>velocity</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_orient_1a92e4cf917f9bc05b829012aa70ec173c" kindref="member">pseudo</ref>,<sp/><ref refid="class_orient_1a92e4cf917f9bc05b829012aa70ec173c" kindref="member">pseudo</ref>,<sp/><ref refid="class_orient_1a92e4cf917f9bc05b829012aa70ec173c" kindref="member">pseudo</ref>};</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"></highlight></codeline>
-<codeline lineno="187" refid="class_orient_1aa81c949d07c23e010579495ae9fcbeec" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_orient_1aa81c949d07c23e010579495ae9fcbeec" kindref="member">currentAxisVar</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a608f69f374c8506493118fd078a686de" kindref="member">sigA</ref>;}</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="190" refid="class_orient_1a63dc5d8f5cd59b45eb91ff2960c2760c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a63dc5d8f5cd59b45eb91ff2960c2760c" kindref="member">currentCenterVar</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a6b473e284278e092e123a55db5a86384" kindref="member">sigC</ref>;}</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="193" refid="class_orient_1afbffdea19192fa3d6aec41469ff2eafd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_orient_1afbffdea19192fa3d6aec41469ff2eafd" kindref="member">currentCenterVarZ</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1ab74f590e11d8a94c4f4279cb1c09b4bd" kindref="member">sigCz</ref>;}</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="196" refid="class_orient_1a5e862e1a3a6efd39c0b28df031b6261d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a5e862e1a3a6efd39c0b28df031b6261d" kindref="member">currentUsed</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1afdb91c183fd364fe2991af75abef823c" kindref="member">used</ref>;};</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="199" refid="class_orient_1a8a36ae9f3eafc8d4afb6a93841240c33" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a8a36ae9f3eafc8d4afb6a93841240c33" kindref="member">currentE</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_orient_1a1d04a94ca95c872f4806290759e9edf7" kindref="member">Ecurr</ref>;};</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="201"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"></highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/Orient.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_ortho_function_8_h.xml b/doxyxml/_ortho_function_8_h.xml
deleted file mode 100644
index c429ef0..0000000
--- a/doxyxml/_ortho_function_8_h.xml
+++ /dev/null
@@ -1,160 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <includes local="no">functional</includes>
-    <includes local="no">memory</includes>
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-      </node>
-      <node id="11">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_ortho_function" prot="public">OrthoFunction</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OrthoFunction_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OrthoFunction_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;functional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="gauss_q_8_h" kindref="compound">gaussQ.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="15"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="18" refid="class_ortho_function_1ae9ede9ae3c0c32d5e60ec326bce606f0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_ortho_function_1ae9ede9ae3c0c32d5e60ec326bce606f0" kindref="member">DensFunc</ref><sp/>=<sp/>std::function&lt;double(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_ortho_function_1a1cab252ae2b89b95da17bf6e59aaa9d9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a1cab252ae2b89b95da17bf6e59aaa9d9" kindref="member">dof</ref>;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_ortho_function_1a1a9ce9fcf086f7cc99741db4daafcc90" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a1a9ce9fcf086f7cc99741db4daafcc90" kindref="member">segment</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_ortho_function_1a8352622b6558a4f039e69d54562509df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1ad7f7640272b85b2c697cceb25e61a049" kindref="member">rmin</ref>,<sp/><ref refid="class_ortho_function_1a8352622b6558a4f039e69d54562509df" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_ortho_function_1a3a2733eb9891d1b40ed7a9a98cc99f4b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a76cc8c546e2193411a454dab3271824e" kindref="member">xmin</ref>,<sp/><ref refid="class_ortho_function_1a696a02f38c75aa85334ff36a337a6f36" kindref="member">xmax</ref>,<sp/><ref refid="class_ortho_function_1a3a2733eb9891d1b40ed7a9a98cc99f4b" kindref="member">dx</ref>;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_ortho_function_1abcda02877da0939ed12bf55417b2a082" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_ortho_function_1abcda02877da0939ed12bf55417b2a082" kindref="member">alph</ref>,<sp/><ref refid="class_ortho_function_1ab721d5201751cc3eedf241fa51b4428d" kindref="member">beta</ref>,<sp/><ref refid="class_ortho_function_1a28fbb28fd3c6a67877e7166a79f2e247" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_ortho_function_1af05163e297127c0405fc7330f65ec90e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1af05163e297127c0405fc7330f65ec90e" kindref="member">knots</ref><sp/>=<sp/>400;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_ortho_function_1a3338b7e38105d023860cffe98c1ffee7" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;LegeQuad&gt;<sp/><ref refid="class_ortho_function_1a3338b7e38105d023860cffe98c1ffee7" kindref="member">lq</ref>;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="55" refid="class_ortho_function_1a6b1e4f353cd771970a6062f68205282c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a6b1e4f353cd771970a6062f68205282c" kindref="member">r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ra<sp/>=<sp/>r/<ref refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(ra<sp/>-<sp/>1.0)/(ra<sp/>+<sp/>1.0);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61" refid="class_ortho_function_1a9aabff39825d50734517fad79ee458b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a9aabff39825d50734517fad79ee458b0" kindref="member">x_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" kindref="member">scale</ref><sp/>*<sp/>(1.0<sp/>+<sp/>x)/(1.0<sp/>-<sp/>x);</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_ortho_function_1a214ec08eca9cacf8e79bf382e750b871" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a214ec08eca9cacf8e79bf382e750b871" kindref="member">d_r_to_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mx<sp/>=<sp/>1.0<sp/>-<sp/>x;</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0<sp/>*<sp/><ref refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" kindref="member">scale</ref><sp/>/<sp/>(<sp/>mx<sp/>*<sp/>mx<sp/>);</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="72"></codeline>
-<codeline lineno="74" refid="class_ortho_function_1a1db6981a7296814ae36ccc824b208c77" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a1db6981a7296814ae36ccc824b208c77" kindref="member">scalar_prod</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="class_ortho_function_1ae7690d4e1253a6784e7978f41679bae2" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_ortho_function_1ae7690d4e1253a6784e7978f41679bae2" kindref="member">poly_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_ortho_function_1ad48d9a2800afd2d519ee48a104dc1d43" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1ad48d9a2800afd2d519ee48a104dc1d43" kindref="member">generate</ref>();</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85" refid="class_ortho_function_1a5fba8890bba5e3ab528e590687ae559a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ortho_function_1a5fba8890bba5e3ab528e590687ae559a" kindref="member">OrthoFunction</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a89d9c79cdafc9b54dbc3d8d8bbc4efc9" kindref="member">nmax</ref>,<sp/><ref refid="class_ortho_function_1ae9ede9ae3c0c32d5e60ec326bce606f0" kindref="member">DensFunc</ref><sp/><ref refid="class_ortho_function_1a27bf66591a8c18be3f5ca572703554d0" kindref="member">W</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1ad7f7640272b85b2c697cceb25e61a049" kindref="member">rmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a8352622b6558a4f039e69d54562509df" kindref="member">rmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" kindref="member">scale</ref>,</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a1cab252ae2b89b95da17bf6e59aaa9d9" kindref="member">dof</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a1a9ce9fcf086f7cc99741db4daafcc90" kindref="member">segment</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_ortho_function_1a3f176d99aaac1e31727176967e9b8bce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a3f176d99aaac1e31727176967e9b8bce" kindref="member">~OrthoFunction</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_ortho_function_1a5dce33e098819f50e474faaec38f8e6d" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_ortho_function_1a5dce33e098819f50e474faaec38f8e6d" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_ortho_function_1a49de6972d696ee6175ecc4a552d9f3e7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a49de6972d696ee6175ecc4a552d9f3e7" kindref="member">setKnots</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N)</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_function_1af05163e297127c0405fc7330f65ec90e" kindref="member">knots</ref><sp/>=<sp/>N;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_function_1a3338b7e38105d023860cffe98c1ffee7" kindref="member">lq</ref><sp/>=<sp/>std::make_shared&lt;LegeQuad&gt;(N);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_ortho_function_1aeb8b4c618c4f0d8be7be8ecd20f39bc5" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_ortho_function_1aeb8b4c618c4f0d8be7be8ecd20f39bc5" kindref="member">testOrtho</ref>();</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_ortho_function_1a14279151a6c9cea9db93ebf056ab0c8c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ortho_function_1a14279151a6c9cea9db93ebf056ab0c8c" kindref="member">dumpOrtho</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>filename);</highlight></codeline>
-<codeline lineno="106"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_ortho_poly_8_h.xml b/doxyxml/_ortho_poly_8_h.xml
deleted file mode 100644
index 250684f..0000000
--- a/doxyxml/_ortho_poly_8_h.xml
+++ /dev/null
@@ -1,250 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_ortho_poly_8_h" kind="file" language="C++">
-    <compoundname>OrthoPoly.H</compoundname>
-    <includes local="no">cfloat</includes>
-    <includes local="no">cmath</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/OrthoPoly.H</label>
-        <link refid="_ortho_poly_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="2">
-        <label>cfloat</label>
-      </node>
-      <node id="3">
-        <label>cmath</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_cheb1" prot="public">Cheb1</innerclass>
-    <innerclass refid="class_cheb2" prot="public">Cheb2</innerclass>
-    <innerclass refid="class_gen_lagu" prot="public">GenLagu</innerclass>
-    <innerclass refid="class_hermite" prot="public">Hermite</innerclass>
-    <innerclass refid="class_legendre" prot="public">Legendre</innerclass>
-    <innerclass refid="class_ortho_poly" prot="public">OrthoPoly</innerclass>
-    <innerclass refid="class_ultra" prot="public">Ultra</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>Class<sp/>for<sp/>generating<sp/>orhogonal<sp/>polynomials</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_OrthoPoly_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OrthoPoly_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cfloat&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="class_ortho_poly" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_ortho_poly" kindref="compound">OrthoPoly</ref></highlight></codeline>
-<codeline lineno="11"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_ortho_poly_1a2477962944125247f6bb446ba361afaa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a2477962944125247f6bb446ba361afaa" kindref="member">coefs</ref>[4];</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*<ref refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" kindref="member">param</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_ortho_poly_1a789ce34b2842e2ddf958e0af56cdc4e6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a789ce34b2842e2ddf958e0af56cdc4e6" kindref="member">w</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="28" refid="class_ortho_poly_1a012dedf1c757a8ac3c999f2c6c2c6b05" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a012dedf1c757a8ac3c999f2c6c2c6b05" kindref="member">h</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_ortho_poly_1afaaab0fc6afe43bc01271a549adfc96f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1afaaab0fc6afe43bc01271a549adfc96f" kindref="member">f0</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="31" refid="class_ortho_poly_1a9e16af920759d1d259e492fab6c79100" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a9e16af920759d1d259e492fab6c79100" kindref="member">f1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_ortho_poly_1a8691a2e79b7d678a2f33c295a230ce48" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a8691a2e79b7d678a2f33c295a230ce48" kindref="member">coef1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="34" refid="class_ortho_poly_1a074c75f7b1758471d5ca9e0c9556adc7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a074c75f7b1758471d5ca9e0c9556adc7" kindref="member">coef2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="35" refid="class_ortho_poly_1a5a1ad9977808f1a4503ccde47b260b57" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a5a1ad9977808f1a4503ccde47b260b57" kindref="member">coef3</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="36" refid="class_ortho_poly_1aa86a42c4a207651a43822242d198725b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1aa86a42c4a207651a43822242d198725b" kindref="member">coef4</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_ortho_poly_1afe8111b9a2946e381e7283a8e06da3b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1afe8111b9a2946e381e7283a8e06da3b8" kindref="member">f</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="39" refid="class_ortho_poly_1aed2903244bcd8423c11ddb3343f701c0" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_ortho_poly_1aed2903244bcd8423c11ddb3343f701c0" kindref="member">fv</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="40" refid="class_ortho_poly_1a954a4941a43f355ddb7e17185eca5052" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a954a4941a43f355ddb7e17185eca5052" kindref="member">get_a</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" kindref="member">a</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="41" refid="class_ortho_poly_1a5e664c78f30952123f31d15582e0bee2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1a5e664c78f30952123f31d15582e0bee2" kindref="member">get_b</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" kindref="member">b</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_gen_lagu" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_gen_lagu" kindref="compound">GenLagu</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly" kindref="compound">OrthoPoly</ref></highlight></codeline>
-<codeline lineno="47"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="48" refid="class_gen_lagu_1abbb1624e8457ca05f28e6fcbddade2f5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1abbb1624e8457ca05f28e6fcbddade2f5" kindref="member">alpha</ref>;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="52" refid="class_gen_lagu_1aea07b10cc1f0b67cc1b00f50edcdd134" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_gen_lagu_1aea07b10cc1f0b67cc1b00f50edcdd134" kindref="member">GenLagu</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A)<sp/>{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" kindref="member">a</ref><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" kindref="member">b</ref><sp/>=<sp/>DBL_MAX;</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_gen_lagu_1abbb1624e8457ca05f28e6fcbddade2f5" kindref="member">alpha</ref><sp/>=<sp/>A;<sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" kindref="member">param</ref><sp/>=<sp/>&amp;<ref refid="class_gen_lagu_1abbb1624e8457ca05f28e6fcbddade2f5" kindref="member">alpha</ref>;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_gen_lagu_1a89233d639e24c4101f2c2ba1d530429b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1a89233d639e24c4101f2c2ba1d530429b" kindref="member">w</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>exp(-x)*pow(x,<sp/><ref refid="class_gen_lagu_1abbb1624e8457ca05f28e6fcbddade2f5" kindref="member">alpha</ref>);<sp/>}</highlight></codeline>
-<codeline lineno="60" refid="class_gen_lagu_1a9d7ecca4767fe280c50869b3a66b525b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1a9d7ecca4767fe280c50869b3a66b525b" kindref="member">h</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="62" refid="class_gen_lagu_1a6ac0b03f6e53a985e91edf1a2effcbeb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1a6ac0b03f6e53a985e91edf1a2effcbeb" kindref="member">coef1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0+n;<sp/>}</highlight></codeline>
-<codeline lineno="63" refid="class_gen_lagu_1a58f4b9eafe779f340024d37ed79590de" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1a58f4b9eafe779f340024d37ed79590de" kindref="member">coef2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0+<ref refid="class_gen_lagu_1abbb1624e8457ca05f28e6fcbddade2f5" kindref="member">alpha</ref>+2.0*n;<sp/>}</highlight></codeline>
-<codeline lineno="64" refid="class_gen_lagu_1adec311d3e33863145b12fa9b47fd41b2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1adec311d3e33863145b12fa9b47fd41b2" kindref="member">coef3</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-1.0;<sp/>}</highlight></codeline>
-<codeline lineno="65" refid="class_gen_lagu_1af46b94ad882e040d1ed43cad6b6002ad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1af46b94ad882e040d1ed43cad6b6002ad" kindref="member">coef4</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1abbb1624e8457ca05f28e6fcbddade2f5" kindref="member">alpha</ref><sp/>+<sp/>n;<sp/>}</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_gen_lagu_1ac551c2e819da1c33d57f8261ae684577" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1ac551c2e819da1c33d57f8261ae684577" kindref="member">f0</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="68" refid="class_gen_lagu_1af4d0e1aa8aa9f44d3647e9c13a962a69" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gen_lagu_1af4d0e1aa8aa9f44d3647e9c13a962a69" kindref="member">f1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-x<sp/>+<sp/><ref refid="class_gen_lagu_1abbb1624e8457ca05f28e6fcbddade2f5" kindref="member">alpha</ref><sp/>+<sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73" refid="class_legendre" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_legendre" kindref="compound">Legendre</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly" kindref="compound">OrthoPoly</ref></highlight></codeline>
-<codeline lineno="74"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="78" refid="class_legendre_1a434e3f774067d26051087fe0c49f2620" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_legendre_1a434e3f774067d26051087fe0c49f2620" kindref="member">Legendre</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" kindref="member">a</ref><sp/>=<sp/>-1.0;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" kindref="member">b</ref><sp/>=<sp/><sp/>1.0;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" kindref="member">param</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_legendre_1a0e7d5d53f303b11e78706f9368a690c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_legendre_1a0e7d5d53f303b11e78706f9368a690c8" kindref="member">w</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;}</highlight></codeline>
-<codeline lineno="85" refid="class_legendre_1a3ff47311ca802bdf62979533b23bb947" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_legendre_1a3ff47311ca802bdf62979533b23bb947" kindref="member">h</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0/(2.0*n+1.0);<sp/>}</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="87" refid="class_legendre_1a0d1d4e87fc98c1863a3aa583f126f402" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_legendre_1a0d1d4e87fc98c1863a3aa583f126f402" kindref="member">coef1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0+n;<sp/>}</highlight></codeline>
-<codeline lineno="88" refid="class_legendre_1a269daa87798014d15c424060036918cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_legendre_1a269daa87798014d15c424060036918cf" kindref="member">coef2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="89" refid="class_legendre_1af4ee4c6b608f71e0b294b606de7cf900" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_legendre_1af4ee4c6b608f71e0b294b606de7cf900" kindref="member">coef3</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0+2.0*n;<sp/>}</highlight></codeline>
-<codeline lineno="90" refid="class_legendre_1a9ba54f9872f17576e0537f87df0ac718" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_legendre_1a9ba54f9872f17576e0537f87df0ac718" kindref="member">coef4</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)n;<sp/>}</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_legendre_1a7f8a4f8230d4059d29fc06c106b8fb48" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_legendre_1a7f8a4f8230d4059d29fc06c106b8fb48" kindref="member">f0</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="93" refid="class_legendre_1a6194ebf2e2c7f9ad707a68260d1d5418" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_legendre_1a6194ebf2e2c7f9ad707a68260d1d5418" kindref="member">f1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>x;<sp/>}</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_ultra" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_ultra" kindref="compound">Ultra</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly" kindref="compound">OrthoPoly</ref></highlight></codeline>
-<codeline lineno="99"><highlight class="normal">{</highlight></codeline>
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-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="104" refid="class_ultra_1a3cc10ab65fb04480f8a0fc65c8668939" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ultra_1a3cc10ab65fb04480f8a0fc65c8668939" kindref="member">Ultra</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A)<sp/>{</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" kindref="member">a</ref><sp/>=<sp/>-1.0;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" kindref="member">b</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref><sp/>=<sp/>A;</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" kindref="member">param</ref><sp/>=<sp/>&amp;<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>;</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_ultra_1a91a7c07fff9ef042f830a3b699dfc2fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ultra_1a91a7c07fff9ef042f830a3b699dfc2fe" kindref="member">w</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>pow(fabs(1.0<sp/>-<sp/>x*x),<sp/><ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>-0.5);<sp/>}</highlight></codeline>
-<codeline lineno="112" refid="class_ultra_1a1a071cc2dd0f100eb6682405bbcfe648" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ultra_1a1a071cc2dd0f100eb6682405bbcfe648" kindref="member">h</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>==0.0)</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*M_PI/(n*n);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>M_PI*exp(log(2.0)*(1.0-2.0*<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>)<sp/>+<sp/>lgamma(2.0*<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>+n)</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>-<sp/>lgamma(1.0+n)<sp/>-<sp/>2.0*lgamma(<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>))/(<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>+n);</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="120" refid="class_ultra_1a300930c02d3c86cea3684bcd953b528b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ultra_1a300930c02d3c86cea3684bcd953b528b" kindref="member">coef1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0+n;<sp/>}</highlight></codeline>
-<codeline lineno="121" refid="class_ultra_1a91b9ca746463e7bda00cf84aa6df5421" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ultra_1a91b9ca746463e7bda00cf84aa6df5421" kindref="member">coef2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="122" refid="class_ultra_1a3da223bbee626d16cc568d6d69e16e76" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ultra_1a3da223bbee626d16cc568d6d69e16e76" kindref="member">coef3</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*(<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>+n);<sp/>}</highlight></codeline>
-<codeline lineno="123" refid="class_ultra_1a4f973fceaabb2faa5a21e05e268b7d42" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ultra_1a4f973fceaabb2faa5a21e05e268b7d42" kindref="member">coef4</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref><sp/>+<sp/>n<sp/>-<sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-<codeline lineno="125" refid="class_ultra_1a5315994bd8122511d13408f7d8115b92" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ultra_1a5315994bd8122511d13408f7d8115b92" kindref="member">f0</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="126" refid="class_ultra_1aade53399b6b7634abd5a58d062d4413d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ultra_1aade53399b6b7634abd5a58d062d4413d" kindref="member">f1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>==0.0)</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*x;</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*x*<ref refid="class_ultra_1a2a30fb0a4fdf5fc41d9cb06a16275d50" kindref="member">alpha</ref>;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136" refid="class_cheb1" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cheb1" kindref="compound">Cheb1</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly" kindref="compound">OrthoPoly</ref></highlight></codeline>
-<codeline lineno="137"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="140" refid="class_cheb1_1a778123a0fa83fc0b10c818c7b17910c4" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheb1_1a778123a0fa83fc0b10c818c7b17910c4" kindref="member">Cheb1</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" kindref="member">a</ref><sp/>=<sp/>-1.0;</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" kindref="member">b</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" kindref="member">param</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="146" refid="class_cheb1_1a20b0b48615e0d4e46d9c9671b794885f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb1_1a20b0b48615e0d4e46d9c9671b794885f" kindref="member">w</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/sqrt(fabs(1.0<sp/>-<sp/>x*x));<sp/>}</highlight></codeline>
-<codeline lineno="147" refid="class_cheb1_1ab7dcbd54cb623cc67ba7cc366d73ca84" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb1_1ab7dcbd54cb623cc67ba7cc366d73ca84" kindref="member">h</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n==0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>M_PI;<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.5*M_PI;<sp/>}</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="149" refid="class_cheb1_1ad64c1e132734c4bddcd2ede0e8137100" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb1_1ad64c1e132734c4bddcd2ede0e8137100" kindref="member">coef1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="150" refid="class_cheb1_1a7aa6efb2eed20c6882389664329ae6e0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb1_1a7aa6efb2eed20c6882389664329ae6e0" kindref="member">coef2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="151" refid="class_cheb1_1aa06dbd92891410d54a930c3d8ae57493" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb1_1aa06dbd92891410d54a930c3d8ae57493" kindref="member">coef3</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0;<sp/>}</highlight></codeline>
-<codeline lineno="152" refid="class_cheb1_1a20335fd6b9c528da6399cabacae65039" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb1_1a20335fd6b9c528da6399cabacae65039" kindref="member">coef4</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"></highlight></codeline>
-<codeline lineno="154" refid="class_cheb1_1ab4fdcde16dd68dc8e3bcafa28d35e571" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb1_1ab4fdcde16dd68dc8e3bcafa28d35e571" kindref="member">f0</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="155" refid="class_cheb1_1a7d5956b9e9bce1b0cfec3d3d07e01672" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb1_1a7d5956b9e9bce1b0cfec3d3d07e01672" kindref="member">f1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>x;<sp/>}</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"></highlight></codeline>
-<codeline lineno="157"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_cheb2" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cheb2" kindref="compound">Cheb2</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_ortho_poly" kindref="compound">OrthoPoly</ref></highlight></codeline>
-<codeline lineno="160"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="163" refid="class_cheb2_1af6b0c70c48aa34c3f0498e0a58a6c48e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheb2_1af6b0c70c48aa34c3f0498e0a58a6c48e" kindref="member">Cheb2</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" kindref="member">a</ref><sp/>=<sp/>-1.0;</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" kindref="member">b</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" kindref="member">param</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="169" refid="class_cheb2_1ac6cb9737949aaf8bbad129ee21609778" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb2_1ac6cb9737949aaf8bbad129ee21609778" kindref="member">w</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>sqrt(fabs(1.0<sp/>-<sp/>x*x));<sp/>}</highlight></codeline>
-<codeline lineno="170" refid="class_cheb2_1a9ddb27326d84b1e34210b8c1713c7b2c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheb2_1a9ddb27326d84b1e34210b8c1713c7b2c" kindref="member">h</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.5*M_PI;<sp/>}</highlight></codeline>
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diff --git a/doxyxml/_out_ascii_8_h.xml b/doxyxml/_out_ascii_8_h.xml
deleted file mode 100644
index c6976d0..0000000
--- a/doxyxml/_out_ascii_8_h.xml
+++ /dev/null
@@ -1,440 +0,0 @@
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-    <includes refid="_out_ascii_8_h" local="no">OutAscii.H</includes>
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diff --git a/doxyxml/_out_c_h_k_p_t_8_h.xml b/doxyxml/_out_c_h_k_p_t_8_h.xml
deleted file mode 100644
index 0e99a26..0000000
--- a/doxyxml/_out_c_h_k_p_t_8_h.xml
+++ /dev/null
@@ -1,59 +0,0 @@
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-    <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H"/>
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-</doxygen>
diff --git a/doxyxml/_out_c_h_k_p_t_q_8_h.xml b/doxyxml/_out_c_h_k_p_t_q_8_h.xml
deleted file mode 100644
index b26cf89..0000000
--- a/doxyxml/_out_c_h_k_p_t_q_8_h.xml
+++ /dev/null
@@ -1,101 +0,0 @@
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-        <label>set</label>
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-        <label>string</label>
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-        <label>vector</label>
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-    <briefdescription>
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-    <detaileddescription>
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-    <programlisting>
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-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="29" refid="class_out_c_h_k_p_t_q_1a0aff4474489d36c956cee74d41476880" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_c_h_k_p_t_q_1a0aff4474489d36c956cee74d41476880" kindref="member">filename</ref>,<sp/><ref refid="class_out_c_h_k_p_t_q_1a34e1763bcac91b52be6f5f9f4d4c409c" kindref="member">nagg</ref>;</highlight></codeline>
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-<codeline lineno="53"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
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-  </compounddef>
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diff --git a/doxyxml/_out_calbr_8_h.xml b/doxyxml/_out_calbr_8_h.xml
deleted file mode 100644
index d289025..0000000
--- a/doxyxml/_out_calbr_8_h.xml
+++ /dev/null
@@ -1,450 +0,0 @@
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-    <compoundname>OutCalbr.H</compoundname>
-    <includes refid="_output_8_h" local="no">Output.H</includes>
-    <includes refid="_component_8_h" local="no">Component.H</includes>
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-        <label>Circular.H</label>
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-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutCalbr.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_coef_8_h.xml b/doxyxml/_out_coef_8_h.xml
deleted file mode 100644
index ec4516b..0000000
--- a/doxyxml/_out_coef_8_h.xml
+++ /dev/null
@@ -1,61 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_coef_8_h" kind="file" language="C++">
-    <compoundname>OutCoef.H</compoundname>
-    <includes refid="_out_coef_8_h" local="no">OutCoef.H</includes>
-    <includedby refid="_out_coef_8_h" local="no">/home/weinberg/Projects/EXP/src/OutCoef.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutCoef.H</label>
-        <link refid="_out_coef_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutCoef.H</label>
-        <link refid="_out_coef_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_out_coef" prot="public">OutCoef</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutCoef_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutCoef_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_out_coef_8_h" kindref="compound">OutCoef.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_out_coef" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_out_coef" kindref="compound">OutCoef</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
-<codeline lineno="17"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_out_coef_1a61424a6820881114f27fc4739d7ae092" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_coef_1a61424a6820881114f27fc4739d7ae092" kindref="member">filename</ref>;</highlight></codeline>
-<codeline lineno="22" refid="class_out_coef_1a1cce1046b87c56c64e45e23ae01cffa7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_out_coef_1a1cce1046b87c56c64e45e23ae01cffa7" kindref="member">prev</ref><sp/>=<sp/>-std::numeric_limits&lt;double&gt;::max();</highlight></codeline>
-<codeline lineno="23" refid="class_out_coef_1ae5d416d4c5dacbb4e1ebb4d8f16b342f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component" kindref="compound">Component</ref><sp/>*<ref refid="class_out_coef_1ae5d416d4c5dacbb4e1ebb4d8f16b342f" kindref="member">tcomp</ref>;</highlight></codeline>
-<codeline lineno="24" refid="class_out_coef_1a0f3c9ffb790b9ed5d734fe0f0f321a20" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_out_coef_1a0f3c9ffb790b9ed5d734fe0f0f321a20" kindref="member">native</ref>;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_out_coef_1a004865edcd8ef66cd83adff57b49c564" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_coef_1a004865edcd8ef66cd83adff57b49c564" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_out_coef_1a756249356030a2b5667c50bb6c919536" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_out_coef_1a756249356030a2b5667c50bb6c919536" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_out_coef_1a104cb10e976d385b1d843a134f3383df" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_coef_1a104cb10e976d385b1d843a134f3383df" kindref="member">OutCoef</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_out_coef_1a1bc2ffd2ed33add9431a473b41eef9b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_coef_1a1bc2ffd2ed33add9431a473b41eef9b8" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutCoef.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_diag_8_h.xml b/doxyxml/_out_diag_8_h.xml
deleted file mode 100644
index 58fdbf5..0000000
--- a/doxyxml/_out_diag_8_h.xml
+++ /dev/null
@@ -1,65 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_diag_8_h" kind="file" language="C++">
-    <compoundname>OutDiag.H</compoundname>
-    <includes refid="_out_diag_8_h" local="no">OutDiag.H</includes>
-    <includedby refid="_out_diag_8_h" local="no">/home/weinberg/Projects/EXP/src/OutDiag.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutDiag.H</label>
-        <link refid="_out_diag_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutDiag.H</label>
-        <link refid="_out_diag_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_out_diag" prot="public">OutDiag</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutDiag_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutDiag_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_out_diag_8_h" kindref="compound">OutDiag.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="class_out_diag" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_out_diag" kindref="compound">OutDiag</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
-<codeline lineno="8"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12" refid="class_out_diag_1a8766f4bf4255d618eaca1652517266c2" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_diag_1a8766f4bf4255d618eaca1652517266c2" kindref="member">filename</ref>;</highlight></codeline>
-<codeline lineno="13" refid="class_out_diag_1a61b84dfe38ddc430791e3a38bad5b033" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;Component*&gt;<sp/><ref refid="class_out_diag_1a61b84dfe38ddc430791e3a38bad5b033" kindref="member">lcomp</ref>;</highlight></codeline>
-<codeline lineno="14" refid="class_out_diag_1af3a7ebf633010ba6f5371fe415b05626" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_out_diag_1af3a7ebf633010ba6f5371fe415b05626" kindref="member">names</ref>;</highlight></codeline>
-<codeline lineno="15" refid="class_out_diag_1a04c6ef3c364c9573bc34a91b99d9b4fa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_out_diag_1a04c6ef3c364c9573bc34a91b99d9b4fa" kindref="member">prev</ref><sp/>=<sp/>-std::numeric_limits&lt;double&gt;::max();</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="class_out_diag_1ac57d6a72db2ca3c561966301eb61a413" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_out_diag_1ac57d6a72db2ca3c561966301eb61a413" kindref="member">NUM</ref>;</highlight></codeline>
-<codeline lineno="18" refid="class_out_diag_1a1403d00b1e898227b7e2c8bb38bb74ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_out_diag_1a6d14e3dc8e19aeb5b65a0e047a2558ae" kindref="member">THETA</ref>,<sp/><ref refid="class_out_diag_1a1403d00b1e898227b7e2c8bb38bb74ee" kindref="member">PHI</ref>,<sp/><ref refid="class_out_diag_1aa021c5de3050479f2229b3fe41ed4d60" kindref="member">RMIN</ref>,<sp/><ref refid="class_out_diag_1abcbf8f4922db87da05b2abc4b6c3671c" kindref="member">RMAX</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_out_diag_1a8d711333b84ec6d18d3bc443dda2d362" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_diag_1a8d711333b84ec6d18d3bc443dda2d362" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="21" refid="class_out_diag_1a5965e4614910a5d89f2b2912ad06906f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_diag_1a5965e4614910a5d89f2b2912ad06906f" kindref="member">header</ref>(ostream&amp;<sp/>out);</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_out_diag_1aff27312b0ad45e479a7ab03b66bcb89e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_out_diag_1aff27312b0ad45e479a7ab03b66bcb89e" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_out_diag_1aa65d264636e4d5d012f19ef7d9f9911f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_diag_1aa65d264636e4d5d012f19ef7d9f9911f" kindref="member">OutDiag</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_out_diag_1af9f72ba95e44ebae58f3476b747751f7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_diag_1af9f72ba95e44ebae58f3476b747751f7" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutDiag.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_frac_8_h.xml b/doxyxml/_out_frac_8_h.xml
deleted file mode 100644
index 4755a2c..0000000
--- a/doxyxml/_out_frac_8_h.xml
+++ /dev/null
@@ -1,445 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_frac_8_h" kind="file" language="C++">
-    <compoundname>OutFrac.H</compoundname>
-    <includes refid="_output_8_h" local="no">Output.H</includes>
-    <includes refid="_component_8_h" local="no">Component.H</includes>
-    <incdepgraph>
-      <node id="29">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="46">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="49">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="39">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-      </node>
-      <node id="41">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-      </node>
-      <node id="32">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="8">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="48">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="36">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="37" relation="include">
-        </childnode>
-      </node>
-      <node id="44">
-        <label>header.H</label>
-        <link refid="header_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-      </node>
-      <node id="17">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="18" relation="include">
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index 8d7e180..0000000
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-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_out_log_1aa69f90c81bf0d2a7ce5439d69613ccc3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_out_log_1aa69f90c81bf0d2a7ce5439d69613ccc3" kindref="member">num_global</ref><sp/>=<sp/>19;</highlight></codeline>
-<codeline lineno="85" refid="class_out_log_1a986fca14bf6cd650c0e1165f47f05b09" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_out_log_1a986fca14bf6cd650c0e1165f47f05b09" kindref="member">num_component</ref><sp/>=<sp/>20;</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_out_log_1ac8aeb513b21fe99b76d7cc35d855b355" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><ref refid="class_out_log_1ac8aeb513b21fe99b76d7cc35d855b355" kindref="member">lab_global</ref>[][19];</highlight></codeline>
-<codeline lineno="90" refid="class_out_log_1a58fff77f80b495528e1b8951b9642cef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><ref refid="class_out_log_1a58fff77f80b495528e1b8951b9642cef" kindref="member">lab_component</ref>[][20];</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_out_log_1abf0c95b18184027a638e7020e2dda9e0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_log_1abf0c95b18184027a638e7020e2dda9e0" kindref="member">OutLog</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_out_log_1a2eb1fae0f0506763bb267a86fc62ec11" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_log_1a2eb1fae0f0506763bb267a86fc62ec11" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutLog.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_multi_8_h.xml b/doxyxml/_out_multi_8_h.xml
deleted file mode 100644
index b52fc82..0000000
--- a/doxyxml/_out_multi_8_h.xml
+++ /dev/null
@@ -1,59 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_multi_8_h" kind="file" language="C++">
-    <compoundname>OutMulti.H</compoundname>
-    <includes refid="_out_multi_8_h" local="no">OutMulti.H</includes>
-    <includedby refid="_out_multi_8_h" local="no">/home/weinberg/Projects/EXP/src/OutMulti.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutMulti.H</label>
-        <link refid="_out_multi_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutMulti.H</label>
-        <link refid="_out_multi_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_out_multi" prot="public">OutMulti</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutMulti_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutMulti_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_out_multi_8_h" kindref="compound">OutMulti.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_out_multi" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_out_multi" kindref="compound">OutMulti</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_out_multi_1a27fdb1a3a3d5a7719d1280c3310e43e7" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_multi_1a27fdb1a3a3d5a7719d1280c3310e43e7" kindref="member">filename</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_out_multi_1a7c3711d07524a06dbe72c946c3322423" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_multi_1a7c3711d07524a06dbe72c946c3322423" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_out_multi_1a1e77292ada50ca2379704f9bca0fdd9f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_out_multi_1a1e77292ada50ca2379704f9bca0fdd9f" kindref="member">prev</ref><sp/>=<sp/>-std::numeric_limits&lt;double&gt;::max();</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_out_multi_1a39525b617da2a9af1e6844b5cdef9ef0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_out_multi_1a39525b617da2a9af1e6844b5cdef9ef0" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_out_multi_1affd458a59f9406787d48bd4e2305bbdc" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_multi_1affd458a59f9406787d48bd4e2305bbdc" kindref="member">OutMulti</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_out_multi_1a29ecce1f93c894116764968464d3e72b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_multi_1a29ecce1f93c894116764968464d3e72b" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutMulti.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_p_s_8_h.xml b/doxyxml/_out_p_s_8_h.xml
deleted file mode 100644
index a7a013d..0000000
--- a/doxyxml/_out_p_s_8_h.xml
+++ /dev/null
@@ -1,59 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_p_s_8_h" kind="file" language="C++">
-    <compoundname>OutPS.H</compoundname>
-    <includes refid="_out_p_s_8_h" local="no">OutPS.H</includes>
-    <includedby refid="_out_p_s_8_h" local="no">/home/weinberg/Projects/EXP/src/OutPS.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPS.H</label>
-        <link refid="_out_p_s_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPS.H</label>
-        <link refid="_out_p_s_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_out_p_s" prot="public">OutPS</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutPS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutPS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_out_p_s_8_h" kindref="compound">OutPS.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="class_out_p_s" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_out_p_s" kindref="compound">OutPS</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
-<codeline lineno="18"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_out_p_s_1a7d8fe8f732041e8bec61deaa6b397464" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_p_s_1a7d8fe8f732041e8bec61deaa6b397464" kindref="member">filename</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_out_p_s_1ab3db5727f1b07bc3cfea2b028ea75b2e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_1ab3db5727f1b07bc3cfea2b028ea75b2e" kindref="member">timer</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="25" refid="class_out_p_s_1a6acd8c3b9cdb80d8ebaeff8b6d9da461" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_1a6acd8c3b9cdb80d8ebaeff8b6d9da461" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_out_p_s_1aeb835ec3204124b4a4df62d1c1d76124" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_out_p_s_1aeb835ec3204124b4a4df62d1c1d76124" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_out_p_s_1a36be7b20a035fe923e40f74a3beb29c9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_p_s_1a36be7b20a035fe923e40f74a3beb29c9" kindref="member">OutPS</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_out_p_s_1aa6917ffb83e7bfc1c8c277ab6e29349c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_1aa6917ffb83e7bfc1c8c277ab6e29349c" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutPS.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_p_s_n_8_h.xml b/doxyxml/_out_p_s_n_8_h.xml
deleted file mode 100644
index fed1af1..0000000
--- a/doxyxml/_out_p_s_n_8_h.xml
+++ /dev/null
@@ -1,59 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_p_s_n_8_h" kind="file" language="C++">
-    <compoundname>OutPSN.H</compoundname>
-    <includes refid="_out_p_s_n_8_h" local="no">OutPSN.H</includes>
-    <includedby refid="_out_p_s_n_8_h" local="no">/home/weinberg/Projects/EXP/src/OutPSN.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPSN.H</label>
-        <link refid="_out_p_s_n_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPSN.H</label>
-        <link refid="_out_p_s_n_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_out_p_s_n" prot="public">OutPSN</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutPSN_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutPSN_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_out_p_s_n_8_h" kindref="compound">OutPSN.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_out_p_s_n" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
-<codeline lineno="23"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_out_p_s_n_1a5aa5b6a5b356649a3b64ddb295cfc322" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_p_s_n_1a5aa5b6a5b356649a3b64ddb295cfc322" kindref="member">filename</ref>;</highlight></codeline>
-<codeline lineno="28" refid="class_out_p_s_n_1a675bbfe9c834a5d53ee772ab47845a3f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_n_1a675bbfe9c834a5d53ee772ab47845a3f" kindref="member">real4</ref>,<sp/><ref refid="class_out_p_s_n_1ac3f7befd57580e293744f98fe00242d8" kindref="member">timer</ref>;</highlight></codeline>
-<codeline lineno="29" refid="class_out_p_s_n_1ae7f2203158c4a09597b8a22fb022e56b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_n_1ae7f2203158c4a09597b8a22fb022e56b" kindref="member">nbeg</ref>;</highlight></codeline>
-<codeline lineno="30" refid="class_out_p_s_n_1a371c6c37e27cc35e0a4e8c18c68ac9e5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_n_1a371c6c37e27cc35e0a4e8c18c68ac9e5" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_out_p_s_n_1a2deabe61a8217c95d25950933970ea2c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_out_p_s_n_1a2deabe61a8217c95d25950933970ea2c" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_out_p_s_n_1a745866ab75975af0f96cf959c0c14d23" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_p_s_n_1a745866ab75975af0f96cf959c0c14d23" kindref="member">OutPSN</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node<sp/>&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_out_p_s_n_1a75891567b0a9a47dfbb167e706519a3b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_n_1a75891567b0a9a47dfbb167e706519a3b" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutPSN.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_p_s_p_8_h.xml b/doxyxml/_out_p_s_p_8_h.xml
deleted file mode 100644
index 6458e53..0000000
--- a/doxyxml/_out_p_s_p_8_h.xml
+++ /dev/null
@@ -1,60 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_p_s_p_8_h" kind="file" language="C++">
-    <compoundname>OutPSP.H</compoundname>
-    <includes refid="_out_p_s_p_8_h" local="no">OutPSP.H</includes>
-    <includedby refid="_out_p_s_p_8_h" local="no">/home/weinberg/Projects/EXP/src/OutPSP.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPSP.H</label>
-        <link refid="_out_p_s_p_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPSP.H</label>
-        <link refid="_out_p_s_p_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_out_p_s_p" prot="public">OutPSP</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutPSP_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutPSP_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_out_p_s_p_8_h" kindref="compound">OutPSP.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_out_p_s_p" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
-<codeline lineno="32"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_out_p_s_p_1ae732876ec8c372422f1a9a865b9bf7f5" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_p_s_p_1ae732876ec8c372422f1a9a865b9bf7f5" kindref="member">filename</ref>,<sp/><ref refid="class_out_p_s_p_1a7623f50b5dce1695c15d13b97080715f" kindref="member">nagg</ref>;</highlight></codeline>
-<codeline lineno="37" refid="class_out_p_s_p_1af599b8cdbc1e2e0d5514a2538ac8c7c6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_p_1af599b8cdbc1e2e0d5514a2538ac8c7c6" kindref="member">real4</ref>,<sp/><ref refid="class_out_p_s_p_1ad5a859f3f5833888e55784a0216dafb5" kindref="member">timer</ref>;</highlight></codeline>
-<codeline lineno="38" refid="class_out_p_s_p_1ab630faa53634e487a7554a10f9dd5065" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_p_1ab630faa53634e487a7554a10f9dd5065" kindref="member">nbeg</ref>;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_out_p_s_p_1a2a76759c8f60f7c4ba2e0711a9dab111" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_p_1a2a76759c8f60f7c4ba2e0711a9dab111" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_out_p_s_p_1aa7ff49a20ebc792784aa69537fa1513a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_out_p_s_p_1aa7ff49a20ebc792784aa69537fa1513a" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_out_p_s_p_1a8931c6703abd5de24af8bbb6be3e30e9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_p_s_p_1a8931c6703abd5de24af8bbb6be3e30e9" kindref="member">OutPSP</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_out_p_s_p_1a5cef52ca7dd67f85120d8c8b6fc24836" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_p_1a5cef52ca7dd67f85120d8c8b6fc24836" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutPSP.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_p_s_q_8_h.xml b/doxyxml/_out_p_s_q_8_h.xml
deleted file mode 100644
index a399a1c..0000000
--- a/doxyxml/_out_p_s_q_8_h.xml
+++ /dev/null
@@ -1,59 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_p_s_q_8_h" kind="file" language="C++">
-    <compoundname>OutPSQ.H</compoundname>
-    <includes refid="_out_p_s_q_8_h" local="no">OutPSQ.H</includes>
-    <includedby refid="_out_p_s_q_8_h" local="no">/home/weinberg/Projects/EXP/src/OutPSQ.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPSQ.H</label>
-        <link refid="_out_p_s_q_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPSQ.H</label>
-        <link refid="_out_p_s_q_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_out_p_s_q" prot="public">OutPSQ</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutPSQ_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutPSQ_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_out_p_s_q_8_h" kindref="compound">OutPSQ.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_out_p_s_q" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_out_p_s_q" kindref="compound">OutPSQ</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
-<codeline lineno="29"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_out_p_s_q_1a67fc03fb5b8b46757e991ed23e54a3ab" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_p_s_q_1a67fc03fb5b8b46757e991ed23e54a3ab" kindref="member">filename</ref>;</highlight></codeline>
-<codeline lineno="34" refid="class_out_p_s_q_1afca7901f41925f6f03223090a94dcdb8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_q_1afca7901f41925f6f03223090a94dcdb8" kindref="member">real4</ref>,<sp/><ref refid="class_out_p_s_q_1ac1cfdab83d95ea176115ebc3218c2cfc" kindref="member">timer</ref>;</highlight></codeline>
-<codeline lineno="35" refid="class_out_p_s_q_1a5d50def1746fbe854ae5d77586624d7f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_q_1a5d50def1746fbe854ae5d77586624d7f" kindref="member">nbeg</ref>,<sp/><ref refid="class_out_p_s_q_1a2549e3bbf7b43978ca0934765b5e0312" kindref="member">threads</ref>;</highlight></codeline>
-<codeline lineno="36" refid="class_out_p_s_q_1aef46e9c0c5bce341af30d3f5b10a7531" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_q_1aef46e9c0c5bce341af30d3f5b10a7531" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_out_p_s_q_1a57bb30edf61c4d0f56049cba7aa8f770" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_out_p_s_q_1a57bb30edf61c4d0f56049cba7aa8f770" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_out_p_s_q_1ae78ce55d5f28021ad9ce14aa60766541" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_p_s_q_1ae78ce55d5f28021ad9ce14aa60766541" kindref="member">OutPSQ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node<sp/>&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_out_p_s_q_1a9cf2c3f636c5192b8656804dacea061c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_p_s_q_1a9cf2c3f636c5192b8656804dacea061c" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>last);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_p_s_r_8_h.xml b/doxyxml/_out_p_s_r_8_h.xml
deleted file mode 100644
index e70542a..0000000
--- a/doxyxml/_out_p_s_r_8_h.xml
+++ /dev/null
@@ -1,61 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_p_s_r_8_h" kind="file" language="C++">
-    <compoundname>OutPSR.H</compoundname>
-    <includes refid="_out_p_s_r_8_h" local="no">OutPSR.H</includes>
-    <includedby refid="_out_p_s_r_8_h" local="no">/home/weinberg/Projects/EXP/src/OutPSR.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPSR.H</label>
-        <link refid="_out_p_s_r_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/OutPSR.H</label>
-        <link refid="_out_p_s_r_8_h"/>
-        <childnode refid="1" relation="include">
-        </childnode>
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-    <innerclass refid="class_out_p_s_r" prot="public">OutPSR</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutPSR_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutPSR_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_out_p_s_r_8_h" kindref="compound">OutPSR.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_out_p_s_r" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_out_p_s_r" kindref="compound">OutPSR</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_output" kindref="compound">Output</ref></highlight></codeline>
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-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
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diff --git a/doxyxml/_out_relaxation_8_h.xml b/doxyxml/_out_relaxation_8_h.xml
deleted file mode 100644
index 2a7211c..0000000
--- a/doxyxml/_out_relaxation_8_h.xml
+++ /dev/null
@@ -1,103 +0,0 @@
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-  <compounddef id="_out_relaxation_8_h" kind="file" language="C++">
-    <compoundname>OutRelaxation.H</compoundname>
-    <includes refid="_output_8_h" local="no">Output.H</includes>
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-        <label>vector</label>
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-    <innerclass refid="class_out_relaxation" prot="public">OutRelaxation</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
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-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_OutRelaxation_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_OutRelaxation_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_output_8_h" kindref="compound">Output.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="8"><highlight class="normal">{</highlight></codeline>
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-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12" refid="class_out_relaxation_1a3e0c51a49d6632b50c0e54705dca761e" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_out_relaxation_1a3e0c51a49d6632b50c0e54705dca761e" kindref="member">fname</ref>;</highlight></codeline>
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-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_out_relaxation_1a0b2cef341d31b3a60f7e746ec03f14b5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_out_relaxation_1a0b2cef341d31b3a60f7e746ec03f14b5" kindref="member">epos</ref>;</highlight></codeline>
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-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_out_relaxation_1ae2feea59e4d1d8e75b95c472fec0372e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_out_relaxation_1ae2feea59e4d1d8e75b95c472fec0372e" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_out_relaxation_1a1f6d236b318714644e317c2e5311d8c3" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_out_relaxation_1a1f6d236b318714644e317c2e5311d8c3" kindref="member">OutRelaxation</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" kindref="member">conf</ref>);</highlight></codeline>
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-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_out_relaxation_1a6935d179bc0a47bab5a1ce846e0fffe3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_out_relaxation_1a6935d179bc0a47bab5a1ce846e0fffe3" kindref="member">Run</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nstep,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" kindref="member">mstep</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">final</highlight><highlight class="normal">=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_out_vel_8_h.xml b/doxyxml/_out_vel_8_h.xml
deleted file mode 100644
index fc2b4d4..0000000
--- a/doxyxml/_out_vel_8_h.xml
+++ /dev/null
@@ -1,538 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_out_vel_8_h" kind="file" language="C++">
-    <compoundname>OutVel.H</compoundname>
-    <includes local="no">functional</includes>
-    <includes local="no">string</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes local="no">unsupported/Eigen/CXX11/Tensor</includes>
-    <includes local="no">highfive/H5File.hpp</includes>
-    <includes local="no">highfive/H5DataSet.hpp</includes>
-    <includes local="no">highfive/H5DataSpace.hpp</includes>
-    <includes local="no">highfive/H5Attribute.hpp</includes>
-    <includes refid="interp_8_h" local="no">interp.H</includes>
-    <includes refid="_component_8_h" local="no">Component.H</includes>
-    <includes refid="_e_x_p_exception_8_h" local="no">EXPException.H</includes>
-    <includes local="no">Coefficients.H</includes>
-    <includes local="no">FieldBasis.H</includes>
-    <incdepgraph>
-      <node id="35">
-        <label>BarrierWrapper.H</label>
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-        </childnode>
-        <childnode refid="4" relation="include">
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-        </childnode>
-        <childnode refid="27" relation="include">
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-        <childnode refid="14" relation="include">
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-        <childnode refid="20" relation="include">
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-        <childnode refid="26" relation="include">
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-        <childnode refid="16" relation="include">
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-      <node id="52">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="56">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="45">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="47" relation="include">
-        </childnode>
-      </node>
-      <node id="47">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="48" relation="include">
-        </childnode>
-      </node>
-      <node id="40">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="54">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="36">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
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-        <label>YamlCheck.H</label>
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-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="43">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
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-      <node id="50">
-        <label>header.H</label>
-        <link refid="header_8_h"/>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="22">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="39">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="32" relation="include">
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-        <label>Component.H</label>
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deleted file mode 100644
index ded95d0..0000000
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diff --git a/doxyxml/_output_container_8_h.xml b/doxyxml/_output_container_8_h.xml
deleted file mode 100644
index bca73d8..0000000
--- a/doxyxml/_output_container_8_h.xml
+++ /dev/null
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-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_p2_quantile_8_h.xml b/doxyxml/_p2_quantile_8_h.xml
deleted file mode 100644
index 46781ba..0000000
--- a/doxyxml/_p2_quantile_8_h.xml
+++ /dev/null
@@ -1,143 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_p2_quantile_8_h" kind="file" language="C++">
-    <compoundname>P2Quantile.H</compoundname>
-    <includes local="no">array</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/P2Quantile.H</label>
-        <link refid="_p2_quantile_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>array</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_p2_quantile" prot="public">P2Quantile</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_P2QUANTILE_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_P2QUANTILE_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;array&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="class_p2_quantile" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p2_quantile" kindref="compound">P2Quantile</ref></highlight></codeline>
-<codeline lineno="15"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" refkind="member"><highlight class="normal"><sp/><sp/>std::array&lt;int,<sp/>5&gt;<sp/><ref refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" kindref="member">n</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="class_p2_quantile_1addc82cea12c1248999df5383b0059faa" refkind="member"><highlight class="normal"><sp/><sp/>std::array&lt;double,<sp/>5&gt;<sp/><ref refid="class_p2_quantile_1addc82cea12c1248999df5383b0059faa" kindref="member">ns</ref>;<sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_p2_quantile_1a5e7165f8caddccc724510ed0f5516df8" refkind="member"><highlight class="normal"><sp/><sp/>std::array&lt;double,<sp/>5&gt;<sp/><ref refid="class_p2_quantile_1a5e7165f8caddccc724510ed0f5516df8" kindref="member">dns</ref>;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" refkind="member"><highlight class="normal"><sp/><sp/>std::array&lt;double,<sp/>5&gt;<sp/><ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" kindref="member">count</ref>;</highlight></codeline>
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-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
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-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(<sp/>(<ref refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" kindref="member">n</ref>[i]<sp/>-<sp/><ref refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" kindref="member">n</ref>[i<sp/>-<sp/>1]<sp/>+<sp/>d)<sp/>*<sp/>(<ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[i<sp/>+<sp/>1]<sp/>-<sp/><ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[i])<sp/>/<sp/>(<ref refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" kindref="member">n</ref>[i<sp/>+<sp/>1]<sp/>-<sp/><ref refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" kindref="member">n</ref>[i])<sp/>+</highlight></codeline>
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-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_p2_quantile_1a24ed888c01f041d1f7f694f785f2d5b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p2_quantile_1a24ed888c01f041d1f7f694f785f2d5b9" kindref="member">Linear</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>d)</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[i]<sp/>+<sp/>d<sp/>*<sp/>(<ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[i<sp/>+<sp/>d]<sp/>-<sp/><ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[i])<sp/>/<sp/>(<ref refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" kindref="member">n</ref>[i<sp/>+<sp/>d]<sp/>-<sp/><ref refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" kindref="member">n</ref>[i]);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_p2_quantile_1a15679a32893b62bdc05028065a29db83" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p2_quantile_1a15679a32893b62bdc05028065a29db83" kindref="member">reset</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>prob)</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p2_quantile_1aaa2fd757d5da710da9ebb277973543b6" kindref="member">p</ref><sp/>=<sp/>prob;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" kindref="member">count</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" kindref="member">addValue</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" kindref="member">count</ref><sp/>&lt;<sp/>5)<sp/>{</highlight></codeline>
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-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" kindref="member">count</ref><sp/>==<sp/>5)<sp/>{</highlight></codeline>
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-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;5;<sp/>i++)<sp/><ref refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" kindref="member">n</ref>[i]<sp/>=<sp/>i;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
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-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
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-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x<sp/>&lt;<sp/><ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[0])<sp/>{<sp/><ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[0]<sp/>=<sp/>x;<sp/>k<sp/>=<sp/>0;<sp/>}</highlight></codeline>
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-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x<sp/>&lt;<sp/><ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[3])<sp/>k<sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x<sp/>&lt;<sp/><ref refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" kindref="member">q</ref>[4])<sp/>k<sp/>=<sp/>3;</highlight></codeline>
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diff --git a/doxyxml/_p_s_p2_8_h.xml b/doxyxml/_p_s_p2_8_h.xml
deleted file mode 100644
index df05b4d..0000000
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-<codeline lineno="27" refid="class_p_s_pstanza_1af528728ac1a848e07b470ca5673f5602" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza_1af528728ac1a848e07b470ca5673f5602" kindref="member">index_size</ref>,<sp/><ref refid="class_p_s_pstanza_1ada8afb7b71b2f10e33f176b216bad41b" kindref="member">r_size</ref>;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_p_s_pstanza_1a9d80d4a9e5197f91a752f26257c97006" refkind="member"><highlight class="normal"><sp/><sp/>streampos<sp/><ref refid="class_p_s_pstanza_1a9d80d4a9e5197f91a752f26257c97006" kindref="member">pos</ref>,<sp/><ref refid="class_p_s_pstanza_1ad6d5fd1c161337c6dbb027e495c82a4f" kindref="member">pspos</ref>;</highlight></codeline>
-<codeline lineno="30" refid="class_p_s_pstanza_1a6bb2d0af5e659e64e707acb7ece01e23" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_s_pstanza_1a6bb2d0af5e659e64e707acb7ece01e23" kindref="member">nparts</ref>;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_p_s_pstanza_1aa8033a91801d2bdafc599e19019cc54d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza_1aa8033a91801d2bdafc599e19019cc54d" kindref="member">operator==</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref>&amp;<sp/>x)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="33"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="class_p_s_pstanza_1af7488c06bf74a6cd75d0f905913d667d" kindref="member">name</ref>.compare(x.<ref refid="class_p_s_pstanza_1af7488c06bf74a6cd75d0f905913d667d" kindref="member">name</ref>)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>real&gt;</highlight></codeline>
-<codeline lineno="43" refid="class_p_particle" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_particle" kindref="compound">PParticle</ref><sp/></highlight></codeline>
-<codeline lineno="44"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="46" refid="class_p_particle_1a8b91e6a246ca00270720d5271a4cdb05" refkind="member"><highlight class="normal"><sp/><sp/>real<sp/><ref refid="class_p_particle_1a8b91e6a246ca00270720d5271a4cdb05" kindref="member">mass</ref>;</highlight></codeline>
-<codeline lineno="47" refid="class_p_particle_1a146e6561f9a12ae05e99bc5c9aec3593" refkind="member"><highlight class="normal"><sp/><sp/>real<sp/><ref refid="class_p_particle_1a146e6561f9a12ae05e99bc5c9aec3593" kindref="member">pos</ref>[3];</highlight></codeline>
-<codeline lineno="48" refid="class_p_particle_1a00635e03cd9331c8a771aafddb2b6b95" refkind="member"><highlight class="normal"><sp/><sp/>real<sp/><ref refid="class_p_particle_1a00635e03cd9331c8a771aafddb2b6b95" kindref="member">vel</ref>[3];</highlight></codeline>
-<codeline lineno="49" refid="class_p_particle_1a0779ab6c2e489b40c405def3b60496bb" refkind="member"><highlight class="normal"><sp/><sp/>real<sp/><ref refid="class_p_particle_1a0779ab6c2e489b40c405def3b60496bb" kindref="member">phi</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;int&gt;<sp/><sp/><sp/><sp/><ref refid="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" kindref="member">iatr</ref>;</highlight></codeline>
-<codeline lineno="52" refid="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;real&gt;<sp/><sp/><sp/><ref refid="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" kindref="member">datr</ref>;</highlight></codeline>
-<codeline lineno="53" refid="class_p_particle_1a4ea8f20fdb8947ed69b23d1970ee9e91" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><sp/><ref refid="class_p_particle_1a4ea8f20fdb8947ed69b23d1970ee9e91" kindref="member">indx</ref>;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_p_particle_1a9022093139ac21eacc21e678264253f8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_particle_1a9022093139ac21eacc21e678264253f8" kindref="member">read</ref>(std::istream&amp;<sp/>in,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>pcount,<sp/>list&lt;PSPstanza&gt;::iterator<sp/>spos)<sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Sequence<sp/>value</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>--------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;index_size)<sp/></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a4ea8f20fdb8947ed69b23d1970ee9e91" kindref="member">indx</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_particle_1a4ea8f20fdb8947ed69b23d1970ee9e91" kindref="member">indx</ref><sp/>=<sp/>pcount;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Initialize<sp/>fields</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>-----------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;comp.niatr)<sp/>{</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" kindref="member">iatr</ref>.size()<sp/>!=<sp/>spos-&gt;comp.niatr)</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" kindref="member">iatr</ref><sp/>=<sp/>vector&lt;int&gt;(spos-&gt;comp.niatr);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;comp.ndatr)<sp/>{</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" kindref="member">datr</ref>.size()<sp/>!=<sp/>spos-&gt;comp.ndatr)</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" kindref="member">datr</ref><sp/>=<sp/>vector&lt;real&gt;(spos-&gt;comp.ndatr);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Read<sp/>the<sp/>rest</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>-------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a8b91e6a246ca00270720d5271a4cdb05" kindref="member">mass</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;3;<sp/>i++)<sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a146e6561f9a12ae05e99bc5c9aec3593" kindref="member">pos</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;3;<sp/>i++)<sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a00635e03cd9331c8a771aafddb2b6b95" kindref="member">vel</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a0779ab6c2e489b40c405def3b60496bb" kindref="member">phi</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;spos-&gt;comp.niatr;<sp/>i++)<sp/></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" kindref="member">iatr</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;spos-&gt;comp.ndatr;<sp/>i++)<sp/></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" kindref="member">datr</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_s_particle" kindref="compound">SParticle</ref></highlight></codeline>
-<codeline lineno="92"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="94" refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref>;</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="97" refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;<sp/>PParticle&lt;float&gt;<sp/><sp/>&gt;<sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>;</highlight></codeline>
-<codeline lineno="98" refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;<sp/>PParticle&lt;double&gt;<sp/>&gt;<sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>;</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_s_particle_1aca1ed0bda038aef357c0e2cc5b13e2f9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_particle_1aca1ed0bda038aef357c0e2cc5b13e2f9" kindref="member">SParticle</ref>()<sp/>:<sp/><ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref>(0)<sp/>{}</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_s_particle_1a8157fb0d9cf66912cb6701a2ff9633c9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a8157fb0d9cf66912cb6701a2ff9633c9" kindref="member">mass</ref>()</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;mass;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;mass;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="class_s_particle_1a78846a0b0c51b3cbaf042ae88d7177da" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a78846a0b0c51b3cbaf042ae88d7177da" kindref="member">pos</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;pos[i];</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;pos[i];</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_s_particle_1a41dfa34d6ec61e198033136a872c0c00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a41dfa34d6ec61e198033136a872c0c00" kindref="member">vel</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;vel[i];</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;vel[i];</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126" refid="class_s_particle_1a6a5f63d8da26a14c969db6e041b37bc0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6a5f63d8da26a14c969db6e041b37bc0" kindref="member">niatr</ref>()</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;iatr.size();</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;iatr.size();</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134" refid="class_s_particle_1af2951ccfc489933053cdf4a2c7c1d240" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1af2951ccfc489933053cdf4a2c7c1d240" kindref="member">ndatr</ref>()</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;datr.size();</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;datr.size();</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142" refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" kindref="member">iatr</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/>{</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;f-&gt;<ref refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" kindref="member">iatr</ref>.size())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;iatr[i];</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>index&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/>{</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;d-&gt;<ref refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" kindref="member">iatr</ref>.size())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;iatr[i];</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>index&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_s_particle_1a4ab8645134e8d7ffe1690283764ff64d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a4ab8645134e8d7ffe1690283764ff64d" kindref="member">datr</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/>{</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;f-&gt;<ref refid="class_s_particle_1a4ab8645134e8d7ffe1690283764ff64d" kindref="member">datr</ref>.size())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;datr[i];</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>index&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/>{</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;d-&gt;<ref refid="class_s_particle_1a4ab8645134e8d7ffe1690283764ff64d" kindref="member">datr</ref>.size())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;datr[i];</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>index&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="182" refid="class_s_particle_1a850c9d55a0ac2e88ccb548731d6935c3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a850c9d55a0ac2e88ccb548731d6935c3" kindref="member">phi</ref>()</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;phi;</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;phi;</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight></codeline>
-<codeline lineno="190" refid="class_s_particle_1a41095f11582d1dcc761c7fcab69c56b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a41095f11582d1dcc761c7fcab69c56b6" kindref="member">indx</ref>()</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;indx;</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;indx;</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198" refid="class_s_particle_1a2ec8fb3cbd496e7c4352cb887e7efe04" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a2ec8fb3cbd496e7c4352cb887e7efe04" kindref="member">setSize</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize)<sp/></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/>rsize)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">)<sp/>)<sp/></highlight><highlight class="keyword">delete</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get();</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">))<sp/></highlight><highlight class="keyword">delete</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get();</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>=<sp/>rsize;</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">))</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref><sp/>=<sp/>std::shared_ptr&lt;<sp/>PParticle&lt;float&gt;<sp/><sp/>&gt;(<sp/></highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/><ref refid="class_p_particle" kindref="compound">PParticle&lt;float&gt;</ref>()<sp/>);</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref><sp/>=<sp/>std::shared_ptr&lt;<sp/>PParticle&lt;double&gt;<sp/>&gt;(<sp/></highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/><ref refid="class_p_particle" kindref="compound">PParticle&lt;double&gt;</ref>()<sp/>);</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211" refid="class_s_particle_1a568a112d821c6291b1dc44371179a6e5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a568a112d821c6291b1dc44371179a6e5" kindref="member">read</ref>(std::istream&amp;<sp/>in,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>pcount,<sp/></highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>list&lt;PSPstanza&gt;::iterator<sp/>spos)<sp/></highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a2ec8fb3cbd496e7c4352cb887e7efe04" kindref="member">setSize</ref>(rsize);</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">))<sp/></highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;read(in,<sp/>pcount,<sp/>spos);</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;read(in,<sp/>pcount,<sp/>spos);</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight></codeline>
-<codeline lineno="221" refid="class_s_particle_1acaaab0fbe3e4e7827d3191e9f5b677b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1acaaab0fbe3e4e7827d3191e9f5b677b9" kindref="member">write</ref>(std::ostream&amp;<sp/>out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>isiz);</highlight></codeline>
-<codeline lineno="222"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224" refid="class_p_s_p" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_s_p" kindref="compound">PSP</ref></highlight></codeline>
-<codeline lineno="225"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"></highlight></codeline>
-<codeline lineno="229" refid="class_p_s_p_1a5de18018153d3ebc6878483423c39cc6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a5de18018153d3ebc6878483423c39cc6" kindref="member">magic</ref><sp/>=<sp/>0xadbfabc0;</highlight></codeline>
-<codeline lineno="230" refid="class_p_s_p_1aa420e0d35ceaa543236b116a3509cd24" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1aa420e0d35ceaa543236b116a3509cd24" kindref="member">mmask</ref><sp/>=<sp/>0xf;</highlight></codeline>
-<codeline lineno="231" refid="class_p_s_p_1a3db2dc47d3c7e19eee39f44f82bb69c4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a3db2dc47d3c7e19eee39f44f82bb69c4" kindref="member">nmask</ref><sp/>=<sp/>~mmask;</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233" refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_master_header" kindref="compound">MasterHeader</ref><sp/><ref refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" kindref="member">header</ref>;</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235" refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" kindref="member">VERBOSE</ref>;</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="237" refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" refkind="member"><highlight class="normal"><sp/><sp/>list&lt;PSPstanza&gt;<sp/><ref refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" kindref="member">stanzas</ref>;</highlight></codeline>
-<codeline lineno="238" refid="class_p_s_p_1a7bad6b96c2370bc3bb7abf3cd37f7de4" refkind="member"><highlight class="normal"><sp/><sp/>list&lt;PSPstanza&gt;::iterator<sp/><ref refid="class_p_s_p_1a7bad6b96c2370bc3bb7abf3cd37f7de4" kindref="member">spos</ref>;</highlight></codeline>
-<codeline lineno="239" refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" kindref="member">cur</ref>;</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241" refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/><ref refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" kindref="member">part</ref>;</highlight></codeline>
-<codeline lineno="242" refid="class_p_s_p_1ae472fd355d5a72505917b8f1a878c738" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1ae472fd355d5a72505917b8f1a878c738" kindref="member">pcount</ref>;</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244" refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" refkind="member"><highlight class="normal"><sp/><sp/>std::ifstream<sp/><ref refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" kindref="member">in</ref>;</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247" refid="class_p_s_p_1acf16e5ddf7cec3471faa970e98c18525" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1acf16e5ddf7cec3471faa970e98c18525" kindref="member">mtot</ref>;</highlight></codeline>
-<codeline lineno="248" refid="class_p_s_p_1a13ab03638eda2112ca35865c82b52934" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;float&gt;<sp/><ref refid="class_p_s_p_1a3f18fa7ed15530d6dadb0e147113e387" kindref="member">pmin</ref>,<sp/><ref refid="class_p_s_p_1ac5c8a08a13b0f8d66e4dcfe63cc1d511" kindref="member">pmed</ref>,<sp/><ref refid="class_p_s_p_1a13ab03638eda2112ca35865c82b52934" kindref="member">pmax</ref>;</highlight></codeline>
-<codeline lineno="249" refid="class_p_s_p_1adefeff8d008510d290fe86861a15f966" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;float&gt;<sp/><ref refid="class_p_s_p_1a07e18a1a45d705e9e82360dd8abd093b" kindref="member">vmin</ref>,<sp/><ref refid="class_p_s_p_1a912a4ecef2f5011e96c7f837ff18d6c2" kindref="member">vmed</ref>,<sp/><ref refid="class_p_s_p_1adefeff8d008510d290fe86861a15f966" kindref="member">vmax</ref>;</highlight></codeline>
-<codeline lineno="250" refid="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" kindref="member">ComputeStats</ref>();</highlight></codeline>
-<codeline lineno="251" refid="class_p_s_p_1a3b5328f0e732e5fd4e60339c7e81aa44" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a3b5328f0e732e5fd4e60339c7e81aa44" kindref="member">write_binary</ref>(std::ostream&amp;<sp/>out,</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>list&lt;PSPstanza&gt;::iterator<sp/>its,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255" refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" kindref="member">check_dirname</ref>();</highlight></codeline>
-<codeline lineno="256" refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>;</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"></highlight></codeline>
-<codeline lineno="259" refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" kindref="member">init</ref>()</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Prepare<sp/>&lt;in&gt;<sp/>to<sp/>throw<sp/>if<sp/>failbit<sp/>gets<sp/>set</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" kindref="member">in</ref>.exceptions(std::ifstream::failbit<sp/>|<sp/>std::ifstream::badbit);</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="265"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="268" refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" kindref="member">PSP</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose)<sp/>:<sp/><ref refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" kindref="member">VERBOSE</ref>(verbose),<sp/><ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>(</highlight><highlight class="stringliteral">&quot;./&quot;</highlight><highlight class="normal">)<sp/>{<sp/><ref refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" kindref="member">init</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"></highlight></codeline>
-<codeline lineno="271" refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" kindref="member">PSP</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose,<sp/>std::string<sp/><ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>)<sp/>:<sp/><ref refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" kindref="member">VERBOSE</ref>(verbose),<sp/><ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>(<ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>)</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" kindref="member">init</ref>();<sp/><ref refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" kindref="member">check_dirname</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"></highlight></codeline>
-<codeline lineno="275" refid="class_p_s_p_1a9af6f9e5c41c73ae19ad840d2ae97d25" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a9af6f9e5c41c73ae19ad840d2ae97d25" kindref="member">~PSP</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" kindref="member">in</ref>.is_open())<sp/><ref refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" kindref="member">in</ref>.close();<sp/>}</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"></highlight></codeline>
-<codeline lineno="278" refid="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" kindref="member">CurrentTime</ref>()<sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" kindref="member">header</ref>.<ref refid="class_master_header_1a57c58e93be3ab14b4e3595078eb0a0be" kindref="member">time</ref>;}</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="281" refid="class_p_s_p_1a0d40b61dd7404d13d8d14ea8cdf15de3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_p_s_p_1a0d40b61dd7404d13d8d14ea8cdf15de3" kindref="member">PrintSummary</ref><sp/><sp/><sp/><sp/><sp/>(ostream<sp/>&amp;out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>stats=</highlight><highlight class="keyword">false</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>timeonly=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"></highlight></codeline>
-<codeline lineno="284" refid="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" kindref="member">GetNamed</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name)</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>x;</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/>x.<ref refid="class_p_s_pstanza_1af7488c06bf74a6cd75d0f905913d667d" kindref="member">name</ref><sp/>=<sp/>name;</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>it<sp/>=<sp/>std::find(<ref refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" kindref="member">stanzas</ref>.begin(),<sp/><ref refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" kindref="member">stanzas</ref>.end(),<sp/>x);</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it<sp/>==<sp/><ref refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" kindref="member">stanzas</ref>.end())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_s_p_1a7bad6b96c2370bc3bb7abf3cd37f7de4" kindref="member">spos</ref><sp/>=<sp/>it;</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" kindref="member">cur</ref><sp/><sp/>=<sp/>&amp;(*spos);</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" kindref="member">cur</ref>;</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"></highlight></codeline>
-<codeline lineno="296" refid="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" kindref="member">GetStanza</ref>();</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299" refid="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" kindref="member">NextStanza</ref>();</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"></highlight></codeline>
-<codeline lineno="302" refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/>*<ref refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" kindref="member">GetParticle</ref><sp/>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"></highlight></codeline>
-<codeline lineno="305" refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/>*<ref refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8" kindref="member">NextParticle</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight></codeline>
-<codeline lineno="308" refid="class_p_s_p_1a6faf9fda5ed3f97e1c1d497418692bb1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a6faf9fda5ed3f97e1c1d497418692bb1" kindref="member">writePSP</ref>(std::ostream&amp;<sp/>out,<sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"></highlight></codeline>
-<codeline lineno="310"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"></highlight></codeline>
-<codeline lineno="312"><highlight class="normal"></highlight></codeline>
-<codeline lineno="313"><highlight class="normal"></highlight></codeline>
-<codeline lineno="317" refid="class_p_s_pout" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_s_pout" kindref="compound">PSPout</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p" kindref="compound">PSP</ref></highlight></codeline>
-<codeline lineno="318"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="320" refid="class_p_s_pout_1aaeba5015643b8dc42553170b60938ff3" refkind="member"><highlight class="normal"><sp/><sp/>streampos<sp/><ref refid="class_p_s_pout_1aaeba5015643b8dc42553170b60938ff3" kindref="member">pos</ref>;</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"></highlight></codeline>
-<codeline lineno="322"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="351"><highlight class="normal"></highlight></codeline>
-<codeline lineno="352" refid="class_p_s_pspl_1a5fba477a148cda6c52d37a9c020a7dbb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref>*<sp/><ref refid="class_p_s_pspl_1a5fba477a148cda6c52d37a9c020a7dbb" kindref="member">GetParticle</ref><sp/>();</highlight></codeline>
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-    </programlisting>
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-</doxygen>
diff --git a/doxyxml/_p_s_p_8_h.xml b/doxyxml/_p_s_p_8_h.xml
deleted file mode 100644
index 034d4fb..0000000
--- a/doxyxml/_p_s_p_8_h.xml
+++ /dev/null
@@ -1,529 +0,0 @@
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-    <innerclass refid="class_p_s_pout" prot="public">PSPout</innerclass>
-    <innerclass refid="class_p_s_pspl" prot="public">PSPspl</innerclass>
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-        <type>std::shared_ptr&lt; <ref refid="class_p_s_p" kindref="compound">PSP</ref> &gt;</type>
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-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>real&gt;</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_particle" kindref="compound">PParticle</ref><sp/></highlight></codeline>
-<codeline lineno="44"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/>real<sp/><ref refid="class_p_particle_1a8b91e6a246ca00270720d5271a4cdb05" kindref="member">mass</ref>;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/>real<sp/><ref refid="class_p_particle_1a146e6561f9a12ae05e99bc5c9aec3593" kindref="member">pos</ref>[3];</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/>real<sp/><ref refid="class_p_particle_1a00635e03cd9331c8a771aafddb2b6b95" kindref="member">vel</ref>[3];</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/>real<sp/><ref refid="class_p_particle_1a0779ab6c2e489b40c405def3b60496bb" kindref="member">phi</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_p_particle_1a9c982910921fa8838981bbb167095d8e" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;int&gt;<sp/><sp/><sp/><ref refid="class_p_particle_1a9c982910921fa8838981bbb167095d8e" kindref="member">iatr</ref>;</highlight></codeline>
-<codeline lineno="52" refid="class_p_particle_1ac28bd560eb3f5fe530c79faed34c96db" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;real&gt;<sp/><sp/><ref refid="class_p_particle_1ac28bd560eb3f5fe530c79faed34c96db" kindref="member">datr</ref>;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_particle_1a4ea8f20fdb8947ed69b23d1970ee9e91" kindref="member">indx</ref>;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_p_particle_1a29377bba1dc57d0c277c1ad1e5b811c6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_particle_1a29377bba1dc57d0c277c1ad1e5b811c6" kindref="member">read</ref>(std::istream&amp;<sp/>in,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>pcount,<sp/>std::list&lt;PSPstanza&gt;::iterator<sp/>spos)<sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Sequence<sp/>value</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>--------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;index_size)<sp/></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a4ea8f20fdb8947ed69b23d1970ee9e91" kindref="member">indx</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_particle_1a4ea8f20fdb8947ed69b23d1970ee9e91" kindref="member">indx</ref><sp/>=<sp/>pcount;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Initialize<sp/>fields</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>-----------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;comp.niatr)<sp/>{</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" kindref="member">iatr</ref>.size()<sp/>!=<sp/>spos-&gt;comp.niatr)</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" kindref="member">iatr</ref><sp/>=<sp/>std::vector&lt;int&gt;(spos-&gt;comp.niatr);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;comp.ndatr)<sp/>{</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" kindref="member">datr</ref>.size()<sp/>!=<sp/>spos-&gt;comp.ndatr)</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" kindref="member">datr</ref><sp/>=<sp/>std::vector&lt;real&gt;(spos-&gt;comp.ndatr);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Read<sp/>the<sp/>rest</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>-------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a8b91e6a246ca00270720d5271a4cdb05" kindref="member">mass</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;3;<sp/>i++)<sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a146e6561f9a12ae05e99bc5c9aec3593" kindref="member">pos</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;3;<sp/>i++)<sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a00635e03cd9331c8a771aafddb2b6b95" kindref="member">vel</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a0779ab6c2e489b40c405def3b60496bb" kindref="member">phi</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;spos-&gt;comp.niatr;<sp/>i++)<sp/></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" kindref="member">iatr</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;spos-&gt;comp.ndatr;<sp/>i++)<sp/></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" kindref="member">datr</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_s_particle" kindref="compound">SParticle</ref></highlight></codeline>
-<codeline lineno="92"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref>;</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;<sp/>PParticle&lt;float&gt;<sp/><sp/>&gt;<sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;<sp/>PParticle&lt;double&gt;<sp/>&gt;<sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>;</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_s_particle_1aca1ed0bda038aef357c0e2cc5b13e2f9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_particle_1aca1ed0bda038aef357c0e2cc5b13e2f9" kindref="member">SParticle</ref>()<sp/>:<sp/><ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref>(0)<sp/>{}</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_s_particle_1a8157fb0d9cf66912cb6701a2ff9633c9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a8157fb0d9cf66912cb6701a2ff9633c9" kindref="member">mass</ref>()</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;mass;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;mass;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="class_s_particle_1a78846a0b0c51b3cbaf042ae88d7177da" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a78846a0b0c51b3cbaf042ae88d7177da" kindref="member">pos</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;pos[i];</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;pos[i];</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_s_particle_1a41dfa34d6ec61e198033136a872c0c00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a41dfa34d6ec61e198033136a872c0c00" kindref="member">vel</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;vel[i];</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;vel[i];</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126" refid="class_s_particle_1a6a5f63d8da26a14c969db6e041b37bc0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6a5f63d8da26a14c969db6e041b37bc0" kindref="member">niatr</ref>()</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;iatr.size();</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;iatr.size();</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134" refid="class_s_particle_1af2951ccfc489933053cdf4a2c7c1d240" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1af2951ccfc489933053cdf4a2c7c1d240" kindref="member">ndatr</ref>()</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;datr.size();</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;datr.size();</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142" refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" kindref="member">iatr</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/>{</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;f-&gt;<ref refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" kindref="member">iatr</ref>.size())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;iatr[i];</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>index&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/>{</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;d-&gt;<ref refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" kindref="member">iatr</ref>.size())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;iatr[i];</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>index&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_s_particle_1a4ab8645134e8d7ffe1690283764ff64d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a4ab8645134e8d7ffe1690283764ff64d" kindref="member">datr</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/>{</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;f-&gt;<ref refid="class_s_particle_1a4ab8645134e8d7ffe1690283764ff64d" kindref="member">datr</ref>.size())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;datr[i];</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>index&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/>{</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;d-&gt;<ref refid="class_s_particle_1a4ab8645134e8d7ffe1690283764ff64d" kindref="member">datr</ref>.size())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;datr[i];</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>index&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="182" refid="class_s_particle_1a850c9d55a0ac2e88ccb548731d6935c3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a850c9d55a0ac2e88ccb548731d6935c3" kindref="member">phi</ref>()</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;phi;</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;phi;</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight></codeline>
-<codeline lineno="190" refid="class_s_particle_1a41095f11582d1dcc761c7fcab69c56b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a41095f11582d1dcc761c7fcab69c56b6" kindref="member">indx</ref>()</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;indx;</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;indx;</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;Particle<sp/>not<sp/>initialized&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198" refid="class_s_particle_1a2ec8fb3cbd496e7c4352cb887e7efe04" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a2ec8fb3cbd496e7c4352cb887e7efe04" kindref="member">setSize</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize)<sp/></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/>rsize)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">)<sp/>)<sp/></highlight><highlight class="keyword">delete</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>.get();</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">))<sp/></highlight><highlight class="keyword">delete</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>.get();</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>=<sp/>rsize;</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">))</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref><sp/>=<sp/>std::shared_ptr&lt;<sp/>PParticle&lt;float&gt;<sp/><sp/>&gt;(<sp/></highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/><ref refid="class_p_particle" kindref="compound">PParticle&lt;float&gt;</ref>()<sp/>);</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref><sp/>=<sp/>std::shared_ptr&lt;<sp/>PParticle&lt;double&gt;<sp/>&gt;(<sp/></highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/><ref refid="class_p_particle" kindref="compound">PParticle&lt;double&gt;</ref>()<sp/>);</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211" refid="class_s_particle_1a1013b78907603a527ec111e5bd233521" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1a1013b78907603a527ec111e5bd233521" kindref="member">read</ref>(std::istream&amp;<sp/>in,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>pcount,<sp/></highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::list&lt;PSPstanza&gt;::iterator<sp/>spos)<sp/></highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a2ec8fb3cbd496e7c4352cb887e7efe04" kindref="member">setSize</ref>(rsize);</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" kindref="member">s</ref><sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">))<sp/></highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a6258a2072e60597466c2af5ad40f6b5e" kindref="member">f</ref>-&gt;read(in,<sp/>pcount,<sp/>spos);</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_s_particle_1a6bd589ecef7985abfd77f7f5386a6513" kindref="member">d</ref>-&gt;read(in,<sp/>pcount,<sp/>spos);</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight></codeline>
-<codeline lineno="221" refid="class_s_particle_1acaaab0fbe3e4e7827d3191e9f5b677b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_particle_1acaaab0fbe3e4e7827d3191e9f5b677b9" kindref="member">write</ref>(std::ostream&amp;<sp/>out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>isiz);</highlight></codeline>
-<codeline lineno="222"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_s_p" kindref="compound">PSP</ref></highlight></codeline>
-<codeline lineno="225"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"></highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a5de18018153d3ebc6878483423c39cc6" kindref="member">magic</ref><sp/>=<sp/>0xadbfabc0;</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1aa420e0d35ceaa543236b116a3509cd24" kindref="member">mmask</ref><sp/>=<sp/>0xf;</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a3db2dc47d3c7e19eee39f44f82bb69c4" kindref="member">nmask</ref><sp/>=<sp/>~mmask;</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><ref refid="class_master_header" kindref="compound">MasterHeader</ref><sp/><ref refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" kindref="member">header</ref>;</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" kindref="member">VERBOSE</ref>;</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="237" refid="class_p_s_p_1a0f0f7c13568ccab0cf2aaca433e38fda" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;PSPstanza&gt;<sp/><ref refid="class_p_s_p_1a0f0f7c13568ccab0cf2aaca433e38fda" kindref="member">stanzas</ref>;</highlight></codeline>
-<codeline lineno="238" refid="class_p_s_p_1a305ce18ca9c87c48bacf025fbc8749b4" refkind="member"><highlight class="normal"><sp/><sp/>std::list&lt;PSPstanza&gt;::iterator<sp/><ref refid="class_p_s_p_1a305ce18ca9c87c48bacf025fbc8749b4" kindref="member">spos</ref>;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" kindref="member">cur</ref>;</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/><ref refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" kindref="member">part</ref>;</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1ae472fd355d5a72505917b8f1a878c738" kindref="member">pcount</ref>;</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/>std::ifstream<sp/><ref refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" kindref="member">in</ref>;</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1acf16e5ddf7cec3471faa970e98c18525" kindref="member">mtot</ref>;</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"><sp/><sp/>std::vector&lt;float&gt;<sp/><ref refid="class_p_s_p_1a3f18fa7ed15530d6dadb0e147113e387" kindref="member">pmin</ref>,<sp/><ref refid="class_p_s_p_1ac5c8a08a13b0f8d66e4dcfe63cc1d511" kindref="member">pmed</ref>,<sp/><ref refid="class_p_s_p_1a13ab03638eda2112ca35865c82b52934" kindref="member">pmax</ref>;</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/>std::vector&lt;float&gt;<sp/><ref refid="class_p_s_p_1a07e18a1a45d705e9e82360dd8abd093b" kindref="member">vmin</ref>,<sp/><ref refid="class_p_s_p_1a912a4ecef2f5011e96c7f837ff18d6c2" kindref="member">vmed</ref>,<sp/><ref refid="class_p_s_p_1adefeff8d008510d290fe86861a15f966" kindref="member">vmax</ref>;</highlight></codeline>
-<codeline lineno="250" refid="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" kindref="member">ComputeStats</ref>();</highlight></codeline>
-<codeline lineno="251" refid="class_p_s_p_1af76c58f257d5dcf8461886c7fde94342" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1af76c58f257d5dcf8461886c7fde94342" kindref="member">write_binary</ref>(std::ostream&amp;<sp/>out,</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::list&lt;PSPstanza&gt;::iterator<sp/>its,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255" refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" kindref="member">check_dirname</ref>();</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>;</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"></highlight></codeline>
-<codeline lineno="259" refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" kindref="member">init</ref>()</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Prepare<sp/>&lt;in&gt;<sp/>to<sp/>throw<sp/>if<sp/>failbit<sp/>gets<sp/>set</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" kindref="member">in</ref>.exceptions(std::ifstream::failbit<sp/>|<sp/>std::ifstream::badbit);</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="265"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="268" refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" kindref="member">PSP</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose)<sp/>:<sp/><ref refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" kindref="member">VERBOSE</ref>(verbose),<sp/><ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>(</highlight><highlight class="stringliteral">&quot;./&quot;</highlight><highlight class="normal">)<sp/>{<sp/><ref refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" kindref="member">init</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"></highlight></codeline>
-<codeline lineno="271" refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" kindref="member">PSP</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose,<sp/>std::string<sp/><ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>)<sp/>:<sp/><ref refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" kindref="member">VERBOSE</ref>(verbose),<sp/><ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>(<ref refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" kindref="member">new_dir</ref>)</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" kindref="member">init</ref>();<sp/><ref refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" kindref="member">check_dirname</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"></highlight></codeline>
-<codeline lineno="275" refid="class_p_s_p_1a9af6f9e5c41c73ae19ad840d2ae97d25" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a9af6f9e5c41c73ae19ad840d2ae97d25" kindref="member">~PSP</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" kindref="member">in</ref>.is_open())<sp/><ref refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" kindref="member">in</ref>.close();<sp/>}</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"></highlight></codeline>
-<codeline lineno="278" refid="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" kindref="member">CurrentTime</ref>()<sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" kindref="member">header</ref>.<ref refid="class_master_header_1a57c58e93be3ab14b4e3595078eb0a0be" kindref="member">time</ref>;}</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="281" refid="class_p_s_p_1a6b3a0cb0a82c573c806361375ad75ab8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_p_s_p_1a6b3a0cb0a82c573c806361375ad75ab8" kindref="member">PrintSummary</ref><sp/><sp/><sp/><sp/><sp/>(std::ostream<sp/>&amp;out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>stats=</highlight><highlight class="keyword">false</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>timeonly=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"></highlight></codeline>
-<codeline lineno="284" refid="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" kindref="member">GetNamed</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name)</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>x;</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/>x.<ref refid="class_p_s_pstanza_1af7488c06bf74a6cd75d0f905913d667d" kindref="member">name</ref><sp/>=<sp/>name;</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>it<sp/>=<sp/>std::find(<ref refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" kindref="member">stanzas</ref>.begin(),<sp/><ref refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" kindref="member">stanzas</ref>.end(),<sp/>x);</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it<sp/>==<sp/><ref refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" kindref="member">stanzas</ref>.end())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_s_p_1a7bad6b96c2370bc3bb7abf3cd37f7de4" kindref="member">spos</ref><sp/>=<sp/>it;</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" kindref="member">cur</ref><sp/><sp/>=<sp/>&amp;(*spos);</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" kindref="member">cur</ref>;</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"></highlight></codeline>
-<codeline lineno="296" refid="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" kindref="member">GetStanza</ref>();</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299" refid="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" kindref="member">NextStanza</ref>();</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"></highlight></codeline>
-<codeline lineno="302" refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/>*<ref refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" kindref="member">GetParticle</ref><sp/>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"></highlight></codeline>
-<codeline lineno="305" refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref><sp/>*<ref refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8" kindref="member">NextParticle</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight></codeline>
-<codeline lineno="308"></codeline>
-<codeline lineno="310" refid="class_p_s_p_1a2aafae2e71f5d928a3a2c9075ebfd72f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref>*<sp/><ref refid="class_p_s_p_1a2aafae2e71f5d928a3a2c9075ebfd72f" kindref="member">begin</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" kindref="member">GetParticle</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="311" refid="class_p_s_p_1a75ffb3e202683386b7b9646afb349213" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref>*<sp/><ref refid="class_p_s_p_1a75ffb3e202683386b7b9646afb349213" kindref="member">end</ref><sp/><sp/>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;<sp/>}</highlight></codeline>
-<codeline lineno="312" refid="class_p_s_p_1a5be729fe6610014a5300aed5bdd6c97e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_particle" kindref="compound">SParticle</ref>*<sp/><ref refid="class_p_s_p_1a5be729fe6610014a5300aed5bdd6c97e" kindref="member">operator++</ref>()<sp/>{<sp/><ref refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8" kindref="member">NextParticle</ref>();<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" kindref="member">part</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="313" refid="class_p_s_p_1a3becaa90556a364f94574e3f0cdbc8e3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a3becaa90556a364f94574e3f0cdbc8e3" kindref="member">operator==</ref>(<ref refid="class_s_particle" kindref="compound">SParticle</ref>*<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>&amp;other)</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" kindref="member">part</ref><sp/>==<sp/>other;<sp/>}</highlight></codeline>
-<codeline lineno="315" refid="class_p_s_p_1a5ea1bb15edde30f2976ad9887d6ed3d1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a5ea1bb15edde30f2976ad9887d6ed3d1" kindref="member">operator!=</ref>(<ref refid="class_s_particle" kindref="compound">SParticle</ref>*<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>&amp;other)</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" kindref="member">part</ref><sp/>!=<sp/>other;<sp/>}</highlight></codeline>
-<codeline lineno="318"></codeline>
-<codeline lineno="320" refid="class_p_s_p_1a6faf9fda5ed3f97e1c1d497418692bb1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p_1a6faf9fda5ed3f97e1c1d497418692bb1" kindref="member">writePSP</ref>(std::ostream&amp;<sp/>out,<sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"></highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="324" refid="class_p_s_p_1ac771aabc04e43d59c60dbf69a1970c43" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;PSP&gt;<sp/><ref refid="class_p_s_p_1ac771aabc04e43d59c60dbf69a1970c43" kindref="member">getPSP</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>dir<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"></highlight></codeline>
-<codeline lineno="326"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"></highlight></codeline>
-<codeline lineno="328"><highlight class="normal"></highlight></codeline>
-<codeline lineno="329"><highlight class="normal"></highlight></codeline>
-<codeline lineno="333"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_s_pout" kindref="compound">PSPout</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_p_s_p" kindref="compound">PSP</ref></highlight></codeline>
-<codeline lineno="334"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="335"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="336" refid="class_p_s_pout_1a3c5392cc3a22649edf09b14717cc4121" refkind="member"><highlight class="normal"><sp/><sp/>std::streampos<sp/><ref refid="class_p_s_pout_1a3c5392cc3a22649edf09b14717cc4121" kindref="member">pos</ref>;</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"></highlight></codeline>
-<codeline lineno="338"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H"/>
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diff --git a/doxyxml/_particle_ferry_8_h.xml b/doxyxml/_particle_ferry_8_h.xml
deleted file mode 100644
index 95fb17d..0000000
--- a/doxyxml/_particle_ferry_8_h.xml
+++ /dev/null
@@ -1,313 +0,0 @@
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-<codeline lineno="25" refid="class_particle_ferry_1a7170c3f77b954e66c7a92033a671aaa4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1a085af18de974b3d75bd80023d39b6e53" kindref="member">keypos</ref>,<sp/><ref refid="class_particle_ferry_1a4174e6cd52ab29e704fcc74177bfb52e" kindref="member">treepos</ref>,<sp/><ref refid="class_particle_ferry_1a7170c3f77b954e66c7a92033a671aaa4" kindref="member">idxpos</ref>;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_particle_ferry_1ae9b995e951a15078a2c2a473abc90a01" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1ae9b995e951a15078a2c2a473abc90a01" kindref="member">BufferSend</ref>();</highlight></codeline>
-<codeline lineno="28" refid="class_particle_ferry_1a4e5f03c1fd509974fd8e1bc7e3303f3b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1a4e5f03c1fd509974fd8e1bc7e3303f3b" kindref="member">BufferRecv</ref>();</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_particle_ferry_1a3e0cc48d7e45755d0913f48b0913b22f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1a3e0cc48d7e45755d0913f48b0913b22f" kindref="member">particleBufInit</ref>();</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_particle_ferry_1afcfcd2fc8e4f3b63286f6500ecba435c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_ferry_1afcfcd2fc8e4f3b63286f6500ecba435c" kindref="member">ParticleFerry</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1a8da9f51543b67b0891bc1888b0d0c96e" kindref="member">nimax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1a786643ea2e4b606db70b01996b823f83" kindref="member">ndmax</ref>);</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_particle_ferry_1ac24a7d926c9de17e112a01d2c4278412" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_ferry_1ac24a7d926c9de17e112a01d2c4278412" kindref="member">~ParticleFerry</ref>();</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_particle_ferry_1aeb928058fd99d1070c8abd44cb509949" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1aeb928058fd99d1070c8abd44cb509949" kindref="member">particlePack</ref>(<ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/>in,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/>buffer);</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_particle_ferry_1aae73e8ee1a6f5ec6148f2f63d05a0d80" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1aae73e8ee1a6f5ec6148f2f63d05a0d80" kindref="member">particleUnpack</ref>(<ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/>out,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/>buffer);</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_particle_ferry_1a64420347f8ebb09f0f0e0a5068debf05" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1a64420347f8ebb09f0f0e0a5068debf05" kindref="member">ShipParticles</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>to,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>from,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal">&amp;<sp/>total);</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_particle_ferry_1a216878dcd10a3d40e6b94a667733aa8d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1a216878dcd10a3d40e6b94a667733aa8d" kindref="member">SendParticle</ref>(<ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/>part);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_particle_ferry_1a56c22b187bffd63dafe52e543b9e6c28" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref><sp/><ref refid="class_particle_ferry_1a56c22b187bffd63dafe52e543b9e6c28" kindref="member">RecvParticle</ref>();</highlight></codeline>
-<codeline lineno="58"></codeline>
-<codeline lineno="60" refid="class_particle_ferry_1abfab74b8ba486afa91e757074b8d5a94" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1abfab74b8ba486afa91e757074b8d5a94" kindref="member">getBufsize</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_particle_ferry_1a48c119b69b5f548e4dbe87f3989ade7d" kindref="member">bufsiz</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63" refid="_particle_ferry_8_h_1aaccf181b89a271f9a3cf718cf1ef244b" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;ParticleFerry&gt;<sp/><ref refid="_particle_ferry_8_h_1aaccf181b89a271f9a3cf718cf1ef244b" kindref="member">ParticleFerryPtr</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_particle_reader_8_h.xml b/doxyxml/_particle_reader_8_h.xml
deleted file mode 100644
index 66c9175..0000000
--- a/doxyxml/_particle_reader_8_h.xml
+++ /dev/null
@@ -1,661 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_particle_reader_8_h" kind="file" language="C++">
-    <compoundname>ParticleReader.H</compoundname>
-    <includes local="no">unordered_map</includes>
-    <includes local="no">stdexcept</includes>
-    <includes local="no">algorithm</includes>
-    <includes local="no">iostream</includes>
-    <includes local="no">fstream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">string</includes>
-    <includes local="no">cmath</includes>
-    <includes local="no">list</includes>
-    <includes local="no">mpi.h</includes>
-    <includes local="no">config_exp.h</includes>
-    <includes refid="_string_tok_8_h" local="no">StringTok.H</includes>
-    <includes refid="header_8_h" local="no">header.H</includes>
-    <includes refid="include_2_particle_8_h" local="no">Particle.H</includes>
-    <includes refid="gadget_8_h" local="no">gadget.H</includes>
-    <includes refid="tipsy_8_h" local="no">tipsy.H</includes>
-    <incdepgraph>
-      <node id="19">
-        <label>Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="2" relation="include">
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-        <childnode refid="8" relation="include">
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-        <label>/home/weinberg/Projects/EXP/include/ParticleReader.H</label>
-        <link refid="_particle_reader_8_h"/>
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-        </childnode>
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-      <node id="15">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
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-      <node id="20">
-        <label>gadget.H</label>
-        <link refid="gadget_8_h"/>
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-        <label>header.H</label>
-        <link refid="header_8_h"/>
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-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
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-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_p_r_1_1_gadget_h_d_f5" prot="public">PR::GadgetHDF5</innerclass>
-    <innerclass refid="class_p_r_1_1_gadget_native" prot="public">PR::GadgetNative</innerclass>
-    <innerclass refid="class_p_r_1_1_particle_reader" prot="public">PR::ParticleReader</innerclass>
-    <innerclass refid="class_p_r_1_1_p_particle" prot="public">PR::PParticle</innerclass>
-    <innerclass refid="class_p_r_1_1_p_s_p" prot="public">PR::PSP</innerclass>
-    <innerclass refid="class_p_r_1_1_p_s_pout" prot="public">PR::PSPout</innerclass>
-    <innerclass refid="class_p_r_1_1_p_s_pspl" prot="public">PR::PSPspl</innerclass>
-    <innerclass refid="class_p_r_1_1_p_s_pstanza" prot="public">PR::PSPstanza</innerclass>
-    <innerclass refid="class_p_r_1_1_tipsy" prot="public">PR::Tipsy</innerclass>
-    <innernamespace refid="namespace_p_r">PR</innernamespace>
-    <briefdescription>
-    </briefdescription>
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-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_ParticleReader_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_ParticleReader_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;unordered_map&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_string_tok_8_h" kindref="compound">StringTok.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="header_8_h" kindref="compound">header.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="utils_2_analysis_2_particle_8_h" kindref="compound">Particle.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="28"><highlight class="normal">{</highlight></codeline>
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-<codeline lineno="31" refid="class_p_r_1_1_particle_reader" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_particle_reader" kindref="compound">ParticleReader</ref></highlight></codeline>
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-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="35" refid="class_p_r_1_1_particle_reader_1a6d0293092f653021b87b779bb2d20bc2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_particle_reader_1a6d0293092f653021b87b779bb2d20bc2" kindref="member">readerTypes</ref>;</highlight></codeline>
-<codeline lineno="36" refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader_1abeb9841e4af7a88c1cf1293c7d59dfd7" kindref="member">numprocs</ref>,<sp/><ref refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" kindref="member">myid</ref>;</highlight></codeline>
-<codeline lineno="37" refid="class_p_r_1_1_particle_reader_1a321c230acfa8d63e36166e2789cb001a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader_1a321c230acfa8d63e36166e2789cb001a" kindref="member">use_mpi</ref>;</highlight></codeline>
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-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="42" refid="class_p_r_1_1_particle_reader_1aff014ecb55fcf3bfdb2e4596ddbc8b20" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_particle_reader_1aff014ecb55fcf3bfdb2e4596ddbc8b20" kindref="member">ParticleReader</ref>()</highlight></codeline>
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-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Check<sp/>for<sp/>MPI</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>MPI_Comm_size(MPI_COMM_WORLD,<sp/>&amp;<ref refid="class_p_r_1_1_particle_reader_1abeb9841e4af7a88c1cf1293c7d59dfd7" kindref="member">numprocs</ref>);</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>MPI_Comm_rank(MPI_COMM_WORLD,<sp/>&amp;<ref refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" kindref="member">myid</ref>);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_particle_reader_1a321c230acfa8d63e36166e2789cb001a" kindref="member">use_mpi</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_particle_reader_1abeb9841e4af7a88c1cf1293c7d59dfd7" kindref="member">numprocs</ref><sp/>=<sp/>1;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" kindref="member">myid</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="58" refid="class_p_r_1_1_particle_reader_1a44664d520e38091ae61b53340fe9ec3e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader_1a44664d520e38091ae61b53340fe9ec3e" kindref="member">~ParticleReader</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61" refid="class_p_r_1_1_particle_reader_1a63c8f579270234489399e7e920ee59bd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader_1a63c8f579270234489399e7e920ee59bd" kindref="member">SelectType</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>type)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="64" refid="class_p_r_1_1_particle_reader_1ad07059133f265c81866db1aad2026cdf" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader_1ad07059133f265c81866db1aad2026cdf" kindref="member">CurrentNumber</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="67" refid="class_p_r_1_1_particle_reader_1aaa7bdf2a176d8446e6229fd03256ab58" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_particle_reader_1aaa7bdf2a176d8446e6229fd03256ab58" kindref="member">GetTypes</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="70" refid="class_p_r_1_1_particle_reader_1a10927485f5e04ee75096e70b52dca6a9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader_1a10927485f5e04ee75096e70b52dca6a9" kindref="member">CurrentTime</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="73" refid="class_p_r_1_1_particle_reader_1a8b50438acca8230e8eb45a91781b9152" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_particle_reader_1a8b50438acca8230e8eb45a91781b9152" kindref="member">firstParticle</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="76" refid="class_p_r_1_1_particle_reader_1a5768007e1583c7c59031fd611c699768" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_particle_reader_1a5768007e1583c7c59031fd611c699768" kindref="member">nextParticle</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="79" refid="class_p_r_1_1_particle_reader_1ab23fba530a517ea46bd6f68fa46c659c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader_1ab23fba530a517ea46bd6f68fa46c659c" kindref="member">PrintSummary</ref>(std::ostream<sp/>&amp;out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>stats=</highlight><highlight class="keyword">false</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>timeonly=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;std::string&gt;&gt;</highlight></codeline>
-<codeline lineno="83" refid="class_p_r_1_1_particle_reader_1af5d10d72983a64c933650656ab8e616c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_particle_reader_1af5d10d72983a64c933650656ab8e616c" kindref="member">parseFileList</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>delimit);</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;std::string&gt;&gt;</highlight></codeline>
-<codeline lineno="87" refid="class_p_r_1_1_particle_reader_1a7ae979e31716b0cdf44f6da87f11d853" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_particle_reader_1a7ae979e31716b0cdf44f6da87f11d853" kindref="member">parseStringList</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>delimit);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;ParticleReader&gt;</highlight></codeline>
-<codeline lineno="91" refid="class_p_r_1_1_particle_reader_1a0965aecd1dbd2f6fbd1cfb868f9e4723" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_particle_reader_1a0965aecd1dbd2f6fbd1cfb868f9e4723" kindref="member">createReader</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>type,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" kindref="member">myid</ref>=0,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="95" refid="class_p_r_1_1_gadget_native" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_gadget_native" kindref="compound">GadgetNative</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader" kindref="compound">ParticleReader</ref></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="97" refid="class_p_r_1_1_gadget_native_1a12b10e7ce993cb63b34171631f861bec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structgadget__header" kindref="compound">gadget_header</ref><sp/><ref refid="class_p_r_1_1_gadget_native_1a12b10e7ce993cb63b34171631f861bec" kindref="member">header</ref>;</highlight></codeline>
-<codeline lineno="98" refid="class_p_r_1_1_gadget_native_1a3e3ccf543918d0458417bf442fda3797" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a3e3ccf543918d0458417bf442fda3797" kindref="member">totalCount</ref>;</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="100" refid="class_p_r_1_1_gadget_native_1a0fa39690d0a499d2d8f129487cb43b86" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a0fa39690d0a499d2d8f129487cb43b86" kindref="member">time</ref>;</highlight></codeline>
-<codeline lineno="101" refid="class_p_r_1_1_gadget_native_1a53fcb4037f8424ab4932ca15f9a374ab" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;Particle&gt;<sp/><ref refid="class_p_r_1_1_gadget_native_1a53fcb4037f8424ab4932ca15f9a374ab" kindref="member">particles</ref>;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>_verbose;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/>_files;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_p_r_1_1_gadget_native_1a891b33d7a2c7c192f8083570df74ff89" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a891b33d7a2c7c192f8083570df74ff89" kindref="member">mass</ref>[6];</highlight></codeline>
-<codeline lineno="106" refid="class_p_r_1_1_gadget_native_1ac01f8a7d9c6597abf0d86da989c3c4eb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1ac01f8a7d9c6597abf0d86da989c3c4eb" kindref="member">npart</ref>[6],<sp/><ref refid="class_p_r_1_1_gadget_native_1aa06192c9d99310d7397003f64b647256" kindref="member">nptot</ref>[6];</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109" refid="class_p_r_1_1_gadget_native_1ac490d912e586b47ba6568d2c9c9ae692" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;::iterator<sp/><ref refid="class_p_r_1_1_gadget_native_1ac490d912e586b47ba6568d2c9c9ae692" kindref="member">curfile</ref>;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_p_r_1_1_gadget_native_1ae2f0b535adea40ffe9e8913f2630cd57" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_gadget_native_1ae2f0b535adea40ffe9e8913f2630cd57" kindref="member">Ptypes</ref>;</highlight></codeline>
-<codeline lineno="112" refid="class_p_r_1_1_gadget_native_1ab09aa004eb44c8c8cf8175bff54cdaf1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::unordered_map&lt;std::string,<sp/>int&gt;<sp/><ref refid="class_p_r_1_1_gadget_native_1ab09aa004eb44c8c8cf8175bff54cdaf1" kindref="member">findP</ref>;</highlight></codeline>
-<codeline lineno="113" refid="class_p_r_1_1_gadget_native_1aff7b4a54be38839b5248a70472022a56" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_gadget_native_1aff7b4a54be38839b5248a70472022a56" kindref="member">Pfound</ref>;</highlight></codeline>
-<codeline lineno="114" refid="class_p_r_1_1_gadget_native_1a26976f3909aa295f231598483a887efa" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a26976f3909aa295f231598483a887efa" kindref="member">ptype</ref>;</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="116" refid="class_p_r_1_1_gadget_native_1a11a6554a4ebf7771522ace196dff2cf7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a11a6554a4ebf7771522ace196dff2cf7" kindref="member">pcount</ref>;</highlight></codeline>
-<codeline lineno="117" refid="class_p_r_1_1_gadget_native_1a1b3d6384de8efdf3bc254d2b236a7a02" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a1b3d6384de8efdf3bc254d2b236a7a02" kindref="member">read_and_load</ref>();</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="119" refid="class_p_r_1_1_gadget_native_1a9a3ca6128fa77fdbec189374672d80ec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a9a3ca6128fa77fdbec189374672d80ec" kindref="member">getNumbers</ref>();</highlight></codeline>
-<codeline lineno="120" refid="class_p_r_1_1_gadget_native_1aad3f1dde3ba8703572f4a112e5e11e52" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1aad3f1dde3ba8703572f4a112e5e11e52" kindref="member">packParticle</ref>();</highlight></codeline>
-<codeline lineno="121" refid="class_p_r_1_1_gadget_native_1af902478fe48655130bebcb746a7255c7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1af902478fe48655130bebcb746a7255c7" kindref="member">nextFile</ref>();</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="126" refid="class_p_r_1_1_gadget_native_1a9deed42858112e1e979dc4a0e7ccf4ed" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_gadget_native_1a9deed42858112e1e979dc4a0e7ccf4ed" kindref="member">GadgetNative</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="129" refid="class_p_r_1_1_gadget_native_1aea9565e7a8acc89cc3c327a542fff04e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1aea9565e7a8acc89cc3c327a542fff04e" kindref="member">SelectType</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>type)<sp/>{</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>it<sp/>=<sp/><ref refid="class_p_r_1_1_gadget_native_1ab09aa004eb44c8c8cf8175bff54cdaf1" kindref="member">findP</ref>.find(type);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it<sp/>!=<sp/><ref refid="class_p_r_1_1_gadget_native_1ab09aa004eb44c8c8cf8175bff54cdaf1" kindref="member">findP</ref>.end())<sp/><ref refid="class_p_r_1_1_gadget_native_1a26976f3909aa295f231598483a887efa" kindref="member">ptype</ref><sp/>=<sp/>it-&gt;second;</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;GadgetNative<sp/>error:<sp/>no<sp/>particle<sp/>type<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>type</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Valid<sp/>GadgetNative<sp/>types<sp/>are:&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>s<sp/>:<sp/><ref refid="class_p_r_1_1_gadget_native_1ae2f0b535adea40ffe9e8913f2630cd57" kindref="member">Ptypes</ref>)<sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>s;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;GadgetNative:<sp/>non-existent<sp/>particle<sp/>type&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_gadget_native_1ac490d912e586b47ba6568d2c9c9ae692" kindref="member">curfile</ref><sp/>=<sp/>_files.begin();<sp/></highlight><highlight class="comment">//<sp/>Set<sp/>to<sp/>first<sp/>file<sp/>and<sp/>open</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_gadget_native_1af902478fe48655130bebcb746a7255c7" kindref="member">nextFile</ref>();</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="146" refid="class_p_r_1_1_gadget_native_1acb886c19ac37c185a2c117ab817698ee" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1acb886c19ac37c185a2c117ab817698ee" kindref="member">CurrentNumber</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a3e3ccf543918d0458417bf442fda3797" kindref="member">totalCount</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="149" refid="class_p_r_1_1_gadget_native_1a9122f85b25cb3e363870f89b7a969bb5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_gadget_native_1a9122f85b25cb3e363870f89b7a969bb5" kindref="member">GetTypes</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1aff7b4a54be38839b5248a70472022a56" kindref="member">Pfound</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="152" refid="class_p_r_1_1_gadget_native_1a354d4611ea99923c8622eb50ef27a569" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a354d4611ea99923c8622eb50ef27a569" kindref="member">CurrentTime</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_native_1a0fa39690d0a499d2d8f129487cb43b86" kindref="member">time</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="155" refid="class_p_r_1_1_gadget_native_1ac55817d77f80ccf30763ec5afa564c6b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_gadget_native_1ac55817d77f80ccf30763ec5afa564c6b" kindref="member">firstParticle</ref>();</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="158" refid="class_p_r_1_1_gadget_native_1acba766d12aa59d40490d77b805a86628" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_gadget_native_1acba766d12aa59d40490d77b805a86628" kindref="member">nextParticle</ref>();</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="163" refid="class_p_r_1_1_gadget_h_d_f5" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_gadget_h_d_f5" kindref="compound">GadgetHDF5</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader" kindref="compound">ParticleReader</ref></highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="166" refid="class_p_r_1_1_gadget_h_d_f5_1a5c133d2c0571392e8abd3108c1018e2f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a5c133d2c0571392e8abd3108c1018e2f" kindref="member">totalCount</ref>;</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="168" refid="class_p_r_1_1_gadget_h_d_f5_1a36889ebf9d343a09270a723903120907" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a36889ebf9d343a09270a723903120907" kindref="member">time</ref>;</highlight></codeline>
-<codeline lineno="169" refid="class_p_r_1_1_gadget_h_d_f5_1a168a3a7257f33cc1351505e10e82ec59" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;Particle&gt;<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a168a3a7257f33cc1351505e10e82ec59" kindref="member">particles</ref>;</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>_verbose;</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/>_files;</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"></highlight></codeline>
-<codeline lineno="173" refid="class_p_r_1_1_gadget_h_d_f5_1a6396641f5b2ef27d896f43a7944cbf10" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a6396641f5b2ef27d896f43a7944cbf10" kindref="member">mass</ref>[6];</highlight></codeline>
-<codeline lineno="174" refid="class_p_r_1_1_gadget_h_d_f5_1a0bcc3af3db76b8a586da43feed3ace0a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a0bcc3af3db76b8a586da43feed3ace0a" kindref="member">npart</ref>[6],<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1ad73e9518617668ac942d3436d506f060" kindref="member">nptot</ref>[6];</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="178" refid="class_p_r_1_1_gadget_h_d_f5_1aee94616a8ca8176592b47f558662122e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;::iterator<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1aee94616a8ca8176592b47f558662122e" kindref="member">curfile</ref>;</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"></highlight></codeline>
-<codeline lineno="180" refid="class_p_r_1_1_gadget_h_d_f5_1aa3e6596e94992c14411c16a38943c066" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1aa3e6596e94992c14411c16a38943c066" kindref="member">Ptypes</ref>;</highlight></codeline>
-<codeline lineno="181" refid="class_p_r_1_1_gadget_h_d_f5_1af78f7f5e85b12cdaa2f3c31a143e38f5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::unordered_map&lt;std::string,<sp/>int&gt;<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1af78f7f5e85b12cdaa2f3c31a143e38f5" kindref="member">findP</ref>;</highlight></codeline>
-<codeline lineno="182" refid="class_p_r_1_1_gadget_h_d_f5_1a0c3ab2469a029cae0c14a65e1e699764" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a0c3ab2469a029cae0c14a65e1e699764" kindref="member">Pfound</ref>;</highlight></codeline>
-<codeline lineno="183" refid="class_p_r_1_1_gadget_h_d_f5_1a252c03e0601aa32390f1490f1f95b447" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a252c03e0601aa32390f1490f1f95b447" kindref="member">ptype</ref>;</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="185" refid="class_p_r_1_1_gadget_h_d_f5_1af8aaca4400042b4b65a796b9e9e270e0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1af8aaca4400042b4b65a796b9e9e270e0" kindref="member">pcount</ref>;</highlight></codeline>
-<codeline lineno="186" refid="class_p_r_1_1_gadget_h_d_f5_1a5f310e43a574e482f92ffd1fe32747e1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a5f310e43a574e482f92ffd1fe32747e1" kindref="member">read_and_load</ref>();</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="188" refid="class_p_r_1_1_gadget_h_d_f5_1a422eb92cf8dfdb3035d994ae0a7f354f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a422eb92cf8dfdb3035d994ae0a7f354f" kindref="member">getNumbers</ref>();</highlight></codeline>
-<codeline lineno="189" refid="class_p_r_1_1_gadget_h_d_f5_1ae24bdefb3cc8289a1ce9c8d60fc25204" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1ae24bdefb3cc8289a1ce9c8d60fc25204" kindref="member">packParticle</ref>();</highlight></codeline>
-<codeline lineno="190" refid="class_p_r_1_1_gadget_h_d_f5_1aaaf32192899eb8de5033069cc06af549" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1aaaf32192899eb8de5033069cc06af549" kindref="member">nextFile</ref>();</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="195" refid="class_p_r_1_1_gadget_h_d_f5_1ad43a07a92f7607521812f78c2c53e356" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1ad43a07a92f7607521812f78c2c53e356" kindref="member">GadgetHDF5</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="198" refid="class_p_r_1_1_gadget_h_d_f5_1a57edc697f801746ef7dd0e02c705ab9c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a57edc697f801746ef7dd0e02c705ab9c" kindref="member">SelectType</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>type)<sp/>{</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>it<sp/>=<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1af78f7f5e85b12cdaa2f3c31a143e38f5" kindref="member">findP</ref>.find(type);</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it<sp/>!=<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1af78f7f5e85b12cdaa2f3c31a143e38f5" kindref="member">findP</ref>.end())<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a252c03e0601aa32390f1490f1f95b447" kindref="member">ptype</ref><sp/>=<sp/>it-&gt;second;</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;GadgetHDF5<sp/>error:<sp/>no<sp/>particle<sp/>type<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>type<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Valid<sp/>GadgetHDF5<sp/>types<sp/>are:&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>s<sp/>:<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1aa3e6596e94992c14411c16a38943c066" kindref="member">Ptypes</ref>)<sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>s;</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;GadgetHDF5:<sp/>non-existent<sp/>particle<sp/>type&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"></highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1aee94616a8ca8176592b47f558662122e" kindref="member">curfile</ref><sp/>=<sp/>_files.begin();<sp/></highlight><highlight class="comment">//<sp/>Set<sp/>to<sp/>first<sp/>file<sp/>and<sp/>open</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1aaaf32192899eb8de5033069cc06af549" kindref="member">nextFile</ref>();</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="214" refid="class_p_r_1_1_gadget_h_d_f5_1ac26138eecb62ad48b6d838c8b4e9e487" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1ac26138eecb62ad48b6d838c8b4e9e487" kindref="member">CurrentNumber</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a5c133d2c0571392e8abd3108c1018e2f" kindref="member">totalCount</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="217" refid="class_p_r_1_1_gadget_h_d_f5_1aa1e6ac26ae6c7bd3780e382fc31e7fb9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1aa1e6ac26ae6c7bd3780e382fc31e7fb9" kindref="member">GetTypes</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a0c3ab2469a029cae0c14a65e1e699764" kindref="member">Pfound</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="220" refid="class_p_r_1_1_gadget_h_d_f5_1a9134eda7c9eeb4c7389b0b8725048fe6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a9134eda7c9eeb4c7389b0b8725048fe6" kindref="member">CurrentTime</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1a36889ebf9d343a09270a723903120907" kindref="member">time</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="223" refid="class_p_r_1_1_gadget_h_d_f5_1aa5d78d2bfe77626133c2018b6e9edbb2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1aa5d78d2bfe77626133c2018b6e9edbb2" kindref="member">firstParticle</ref>();</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="226" refid="class_p_r_1_1_gadget_h_d_f5_1ae4f7d5e8fed97bdb27a9b200c64b7b30" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_gadget_h_d_f5_1ae4f7d5e8fed97bdb27a9b200c64b7b30" kindref="member">nextParticle</ref>();</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="230" refid="class_p_r_1_1_p_s_pstanza" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/></highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="233" refid="class_p_r_1_1_p_s_pstanza_1a5c41938956df85748e6be52e2ec21b8d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_component_header" kindref="compound">ComponentHeader</ref><sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a5c41938956df85748e6be52e2ec21b8d" kindref="member">comp</ref>;</highlight></codeline>
-<codeline lineno="234" refid="class_p_r_1_1_p_s_pstanza_1adcf57e7c7e3259c89e16925e1240d240" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_p_r_1_1_p_s_pstanza_1adcf57e7c7e3259c89e16925e1240d240" kindref="member">name</ref>;</highlight></codeline>
-<codeline lineno="235" refid="class_p_r_1_1_p_s_pstanza_1a803f5172df2f10f52cb756d94377dd1f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a803f5172df2f10f52cb756d94377dd1f" kindref="member">id</ref>;</highlight></codeline>
-<codeline lineno="236" refid="class_p_r_1_1_p_s_pstanza_1af91a2d243eeea39805289013945d7a34" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_p_r_1_1_p_s_pstanza_1af91a2d243eeea39805289013945d7a34" kindref="member">cparam</ref>;</highlight></codeline>
-<codeline lineno="237" refid="class_p_r_1_1_p_s_pstanza_1a473cbd7961d68ca403f667bac634e9d9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a473cbd7961d68ca403f667bac634e9d9" kindref="member">fparam</ref>;</highlight></codeline>
-<codeline lineno="238" refid="class_p_r_1_1_p_s_pstanza_1a737c842edca0b767d0b341246059195a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a737c842edca0b767d0b341246059195a" kindref="member">index_size</ref>,<sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a9081ca8d9005def13cbe1bb41e316b69" kindref="member">r_size</ref>;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="240" refid="class_p_r_1_1_p_s_pstanza_1a02cc3c11e5276d58eab016d391d69d4d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>streampos<sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a02cc3c11e5276d58eab016d391d69d4d" kindref="member">pos</ref>,<sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a99325bc261ae076975107b271b44481a" kindref="member">pspos</ref>;</highlight></codeline>
-<codeline lineno="241" refid="class_p_r_1_1_p_s_pstanza_1a4574a5b84ba0177b458f7cdbd5f8ee48" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a4574a5b84ba0177b458f7cdbd5f8ee48" kindref="member">nparts</ref>;</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="243" refid="class_p_r_1_1_p_s_pstanza_1a9723beb48312f0f2707405e6e9e227eb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pstanza_1a9723beb48312f0f2707405e6e9e227eb" kindref="member">operator==</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref>&amp;<sp/>x)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="244"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="class_p_r_1_1_p_s_pstanza_1adcf57e7c7e3259c89e16925e1240d240" kindref="member">name</ref>.compare(x.<ref refid="class_p_r_1_1_p_s_pstanza_1adcf57e7c7e3259c89e16925e1240d240" kindref="member">name</ref>)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>real&gt;</highlight></codeline>
-<codeline lineno="254" refid="class_p_r_1_1_p_particle" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_p_particle" kindref="compound">PParticle</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref></highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/>real<sp/>_mass;</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/>real<sp/>_pos[3];</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/>real<sp/>_vel[3];</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/>real<sp/>_phi;</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/>vector&lt;real&gt;<sp/><sp/><sp/>_datr;</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="265"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="267" refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" kindref="member">read</ref>(std::istream&amp;<sp/>in,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>pcount,<sp/>list&lt;PSPstanza&gt;::iterator<sp/>spos)<sp/></highlight></codeline>
-<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Sequence<sp/>value</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>--------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;index_size)<sp/></highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_particle_1a041051e4763a83554abed7304dfda4a7" kindref="member">indx</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_particle_1a041051e4763a83554abed7304dfda4a7" kindref="member">indx</ref><sp/>=<sp/>pcount;</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Initialize<sp/>fields</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>-----------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;comp.niatr)<sp/>{</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" kindref="member">iattrib</ref>.resize(spos-&gt;comp.niatr);</highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;comp.ndatr)<sp/>{</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_datr.resize(spos-&gt;comp.ndatr);</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_particle_1a04153827c29d7a278023801845f9c8f3" kindref="member">dattrib</ref>.resize(spos-&gt;comp.ndatr);</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Read<sp/>the<sp/>rest</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>-------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;_mass,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;3;<sp/>i++)<sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;_pos[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;3;<sp/>i++)<sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;_vel[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;_phi,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;spos-&gt;comp.niatr;<sp/>i++)<sp/></highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" kindref="member">iattrib</ref>[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;spos-&gt;comp.ndatr;<sp/>i++)<sp/></highlight></codeline>
-<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>in.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;_datr[i],<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real));</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Copy<sp/>real<sp/>to<sp/>double</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>-------------------</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_particle_1ae6d46dc24a6666d526f211151fecca5f" kindref="member">mass</ref><sp/>=<sp/>_mass;</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;3;<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_particle_1a3606e8a85c0b5ef30d7cf2777907e58e" kindref="member">pos</ref>[i]<sp/>=<sp/>_pos[i];</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_particle_1a13bd0267040135a338f62130ca1614d6" kindref="member">vel</ref>[i]<sp/>=<sp/>_vel[i];</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_particle_1a04153827c29d7a278023801845f9c8f3" kindref="member">dattrib</ref>.clear();</highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>v<sp/>:<sp/>_datr)<sp/><ref refid="class_particle_1a04153827c29d7a278023801845f9c8f3" kindref="member">dattrib</ref>.push_back(v);</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_datr.clear();</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="311" refid="class_p_r_1_1_p_particle_1ab9489dd2dd36e7537df98d3dea3744ce" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_particle_1ab9489dd2dd36e7537df98d3dea3744ce" kindref="member">skip</ref>(std::istream&amp;<sp/>in,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>pcount,<sp/>list&lt;PSPstanza&gt;::iterator<sp/>spos)<sp/></highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>skipsize<sp/>=<sp/>8*</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real)<sp/>+</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>spos-&gt;comp.niatr*</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>+</highlight></codeline>
-<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>spos-&gt;comp.ndatr*</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(real);</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(spos-&gt;index_size)<sp/>skipsize<sp/>+=<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>long);</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in.seekg(skipsize,<sp/>std::ios::cur);</highlight></codeline>
-<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="322"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="325" refid="class_p_r_1_1_p_s_p" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_p_s_p" kindref="compound">PSP</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader" kindref="compound">ParticleReader</ref></highlight></codeline>
-<codeline lineno="326"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="328"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="330" refid="class_p_r_1_1_p_s_p_1a12424e52bab67a14df6596a84a1dfbf0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1a12424e52bab67a14df6596a84a1dfbf0" kindref="member">magic</ref><sp/>=<sp/>0xadbfabc0;</highlight></codeline>
-<codeline lineno="331" refid="class_p_r_1_1_p_s_p_1aa1a016605ba6d8ac681dc57c95b856ea" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1aa1a016605ba6d8ac681dc57c95b856ea" kindref="member">mmask</ref><sp/>=<sp/>0xf;</highlight></codeline>
-<codeline lineno="332" refid="class_p_r_1_1_p_s_p_1ae03de96b330fbc496203a944c9d8155d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1ae03de96b330fbc496203a944c9d8155d" kindref="member">nmask</ref><sp/>=<sp/>~mmask;</highlight></codeline>
-<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="334" refid="class_p_r_1_1_p_s_p_1a04d41b889b796fb902bd73956c504935" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_master_header" kindref="compound">MasterHeader</ref><sp/><ref refid="class_p_r_1_1_p_s_p_1a04d41b889b796fb902bd73956c504935" kindref="member">header</ref>;</highlight></codeline>
-<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="336" refid="class_p_r_1_1_p_s_p_1a3018193d989bfd8e85197323bff9d915" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1a3018193d989bfd8e85197323bff9d915" kindref="member">VERBOSE</ref>;</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="338" refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::list&lt;PSPstanza&gt;<sp/><ref refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" kindref="member">stanzas</ref>;</highlight></codeline>
-<codeline lineno="339" refid="class_p_r_1_1_p_s_p_1a8e6869ea4615051c89d7fab466df84f7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::list&lt;PSPstanza&gt;::iterator<sp/><ref refid="class_p_r_1_1_p_s_p_1a8e6869ea4615051c89d7fab466df84f7" kindref="member">spos</ref>;</highlight></codeline>
-<codeline lineno="340" refid="class_p_r_1_1_p_s_p_1aa97fe74ea485da5231a34720f33f3126" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_r_1_1_p_s_p_1aa97fe74ea485da5231a34720f33f3126" kindref="member">cur</ref>;</highlight></codeline>
-<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="342" refid="class_p_r_1_1_p_s_p_1afe9d8e39d4211db9161dcc9aac41aff2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_particle" kindref="compound">PParticle&lt;float&gt;</ref><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_p_1afe9d8e39d4211db9161dcc9aac41aff2" kindref="member">fpart</ref>;</highlight></codeline>
-<codeline lineno="343" refid="class_p_r_1_1_p_s_p_1ab040502b6884fdd165b4e34176c2d41e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_particle" kindref="compound">PParticle&lt;double&gt;</ref><sp/><sp/><ref refid="class_p_r_1_1_p_s_p_1ab040502b6884fdd165b4e34176c2d41e" kindref="member">dpart</ref>;</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="345" refid="class_p_r_1_1_p_s_p_1a3d9f66a7c77203d1caa22bf738d60b5e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1a3d9f66a7c77203d1caa22bf738d60b5e" kindref="member">pcount</ref>;</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="347" refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::ifstream<sp/><ref refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" kindref="member">in</ref>;</highlight></codeline>
-<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="350" refid="class_p_r_1_1_p_s_p_1aee7068c55f7839c92f0de0be5cd92c7d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1aee7068c55f7839c92f0de0be5cd92c7d" kindref="member">mtot</ref>;</highlight></codeline>
-<codeline lineno="351" refid="class_p_r_1_1_p_s_p_1abe6860a6f676e6a33d0c40d50e7c8350" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_p_r_1_1_p_s_p_1aa1481a5cdbf370f85a807129eca9430d" kindref="member">pmin</ref>,<sp/><ref refid="class_p_r_1_1_p_s_p_1a6fdce0cb920f7dfdea11359bf3f886af" kindref="member">pmed</ref>,<sp/><ref refid="class_p_r_1_1_p_s_p_1abe6860a6f676e6a33d0c40d50e7c8350" kindref="member">pmax</ref>;</highlight></codeline>
-<codeline lineno="352" refid="class_p_r_1_1_p_s_p_1a423891dd160ef3e7f653ebc770111009" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_p_r_1_1_p_s_p_1ad84fbdde4036eda1dbbc48e52a3acd6b" kindref="member">vmin</ref>,<sp/><ref refid="class_p_r_1_1_p_s_p_1a0fae17f0db9e902d6bcd988c58655ab2" kindref="member">vmed</ref>,<sp/><ref refid="class_p_r_1_1_p_s_p_1a423891dd160ef3e7f653ebc770111009" kindref="member">vmax</ref>;</highlight></codeline>
-<codeline lineno="353" refid="class_p_r_1_1_p_s_p_1a88ca1aef25d9b850adf02f2c767837bb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1a88ca1aef25d9b850adf02f2c767837bb" kindref="member">ComputeStats</ref>();</highlight></codeline>
-<codeline lineno="354" refid="class_p_r_1_1_p_s_p_1ab8025923eeff5ec56ce3512b95c66317" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1ab8025923eeff5ec56ce3512b95c66317" kindref="member">write_binary</ref>(std::ostream&amp;<sp/>out,</highlight></codeline>
-<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>list&lt;PSPstanza&gt;::iterator<sp/>its,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="358" refid="class_p_r_1_1_p_s_p_1abe920a1152f5c03fb3505e5cf51041df" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1abe920a1152f5c03fb3505e5cf51041df" kindref="member">init</ref>()</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Prepare<sp/>&lt;in&gt;<sp/>to<sp/>throw<sp/>if<sp/>failbit<sp/>gets<sp/>set</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" kindref="member">in</ref>.exceptions(std::ifstream::failbit<sp/>|<sp/>std::ifstream::badbit);</highlight></codeline>
-<codeline lineno="362"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="365"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="366"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="368" refid="class_p_r_1_1_p_s_p_1a8e16d6172c04d65dcc3caac13e619bb7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_p_1a8e16d6172c04d65dcc3caac13e619bb7" kindref="member">PSP</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose)<sp/>:<sp/><ref refid="class_p_r_1_1_p_s_p_1a3018193d989bfd8e85197323bff9d915" kindref="member">VERBOSE</ref>(verbose)<sp/>{<sp/><ref refid="class_p_r_1_1_p_s_p_1abe920a1152f5c03fb3505e5cf51041df" kindref="member">init</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="371" refid="class_p_r_1_1_p_s_p_1aabf80c9f67ccfd25beb1abe1d6354825" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1aabf80c9f67ccfd25beb1abe1d6354825" kindref="member">~PSP</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" kindref="member">in</ref>.is_open())<sp/><ref refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" kindref="member">in</ref>.close();<sp/>}</highlight></codeline>
-<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="374" refid="class_p_r_1_1_p_s_p_1adceed7e0b520c1e2b97875428fad369c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1adceed7e0b520c1e2b97875428fad369c" kindref="member">CurrentTime</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1a04d41b889b796fb902bd73956c504935" kindref="member">header</ref>.<ref refid="class_master_header_1a57c58e93be3ab14b4e3595078eb0a0be" kindref="member">time</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="377" refid="class_p_r_1_1_p_s_p_1a3db00a81bbfad079f5d903a150ab695c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1a3db00a81bbfad079f5d903a150ab695c" kindref="member">PrintSummary</ref>(ostream<sp/>&amp;out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>stats=</highlight><highlight class="keyword">false</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>timeonly=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="380" refid="class_p_r_1_1_p_s_p_1afb271968385451704400b13eb9ed66b0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_r_1_1_p_s_p_1afb271968385451704400b13eb9ed66b0" kindref="member">GetNamed</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name)</highlight></codeline>
-<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>x;</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>x.<ref refid="class_p_r_1_1_p_s_pstanza_1adcf57e7c7e3259c89e16925e1240d240" kindref="member">name</ref><sp/>=<sp/>name;</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>it<sp/>=<sp/>std::find(<ref refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" kindref="member">stanzas</ref>.begin(),<sp/><ref refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" kindref="member">stanzas</ref>.end(),<sp/>x);</highlight></codeline>
-<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(it<sp/>==<sp/><ref refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" kindref="member">stanzas</ref>.end())<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_p_1a8e6869ea4615051c89d7fab466df84f7" kindref="member">spos</ref><sp/>=<sp/>it;</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_p_1aa97fe74ea485da5231a34720f33f3126" kindref="member">cur</ref><sp/><sp/>=<sp/>&amp;(*spos);</highlight></codeline>
-<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1aa97fe74ea485da5231a34720f33f3126" kindref="member">cur</ref>;</highlight></codeline>
-<codeline lineno="389"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="391" refid="class_p_r_1_1_p_s_p_1aad3b887d40b88207ea894fc0024c4884" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_p_s_p_1aad3b887d40b88207ea894fc0024c4884" kindref="member">GetTypes</ref>()</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/>ret;</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>v<sp/>:<sp/><ref refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" kindref="member">stanzas</ref>)<sp/>ret.push_back(v.name);</highlight></codeline>
-<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="399" refid="class_p_r_1_1_p_s_p_1a3c5ed37a3c7a2311f368f287a36cbfcc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1a3c5ed37a3c7a2311f368f287a36cbfcc" kindref="member">SelectType</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name)</highlight></codeline>
-<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_p_r_1_1_p_s_p_1afb271968385451704400b13eb9ed66b0" kindref="member">GetNamed</ref>(name))<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;PSP<sp/>error:<sp/>no<sp/>particle<sp/>type<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>name<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;PSP<sp/>error:<sp/>non-existent<sp/>particle<sp/>type&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="407" refid="class_p_r_1_1_p_s_p_1a30508c9bcea21d4c88f3bb097935c13d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1a30508c9bcea21d4c88f3bb097935c13d" kindref="member">CurrentNumber</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1aa97fe74ea485da5231a34720f33f3126" kindref="member">cur</ref>-&gt;<ref refid="class_p_r_1_1_p_s_pstanza_1a5c41938956df85748e6be52e2ec21b8d" kindref="member">comp</ref>.<ref refid="class_component_header_1adbc701a318d16c3801ae8e3bbc9abc8d" kindref="member">nbod</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="410" refid="class_p_r_1_1_p_s_p_1aac293b9ac96890e4d94a62efbfd39fc4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_r_1_1_p_s_p_1aac293b9ac96890e4d94a62efbfd39fc4" kindref="member">GetStanza</ref>();</highlight></codeline>
-<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="413" refid="class_p_r_1_1_p_s_p_1a73724dc649c5f4814cdd955c36e901e0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref><sp/>*<ref refid="class_p_r_1_1_p_s_p_1a73724dc649c5f4814cdd955c36e901e0" kindref="member">NextStanza</ref>();</highlight></codeline>
-<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="416" refid="class_p_r_1_1_p_s_p_1aa87bdd1965311624af398338f3d9c928" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p_1aa87bdd1965311624af398338f3d9c928" kindref="member">writePSP</ref>(std::ostream&amp;<sp/>out,<sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>real4);</highlight></codeline>
-<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="419"><highlight class="normal"></highlight></codeline>
-<codeline lineno="420" refid="class_p_r_1_1_p_s_p_1a5c7372c606bfa1860e47f80abb50dc41" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_p_s_p_1a5c7372c606bfa1860e47f80abb50dc41" kindref="member">firstParticle</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="421" refid="class_p_r_1_1_p_s_p_1aa1049c277a7602af55f565d299cc3042" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_p_s_p_1aa1049c277a7602af55f565d299cc3042" kindref="member">nextParticle</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="423"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="424"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="425"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="429" refid="class_p_r_1_1_p_s_pout" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_p_s_pout" kindref="compound">PSPout</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p" kindref="compound">PSP</ref></highlight></codeline>
-<codeline lineno="430"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="431"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="432" refid="class_p_r_1_1_p_s_pout_1ac2a29bde3ef885cb479142b7a0e1d25a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>streampos<sp/><ref refid="class_p_r_1_1_p_s_pout_1ac2a29bde3ef885cb479142b7a0e1d25a" kindref="member">pos</ref>;</highlight></codeline>
-<codeline lineno="433"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="434"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="435"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="437" refid="class_p_r_1_1_p_s_pout_1a4448dec760b8cd2dfa763a1d20624f36" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_pout_1a4448dec760b8cd2dfa763a1d20624f36" kindref="member">PSPout</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="438"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="440" refid="class_p_r_1_1_p_s_pout_1a7b18e8184d94cf8ae31a5210ba1a1d78" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pout_1a7b18e8184d94cf8ae31a5210ba1a1d78" kindref="member">~PSPout</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="443"><highlight class="normal"></highlight></codeline>
-<codeline lineno="444" refid="class_p_r_1_1_p_s_pout_1a8bfaa7b449c0a698fd6839330d89503e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_p_s_pout_1a8bfaa7b449c0a698fd6839330d89503e" kindref="member">firstParticle</ref>();</highlight></codeline>
-<codeline lineno="445" refid="class_p_r_1_1_p_s_pout_1addda79bc2ff8cad57564329ecc24e347" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_p_s_pout_1addda79bc2ff8cad57564329ecc24e347" kindref="member">nextParticle</ref><sp/>();</highlight></codeline>
-<codeline lineno="447"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="448"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="452" refid="class_p_r_1_1_p_s_pspl" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_p_s_pspl" kindref="compound">PSPspl</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_p" kindref="compound">PSP</ref></highlight></codeline>
-<codeline lineno="453"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="454"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="455" refid="class_p_r_1_1_p_s_pspl_1aa5293538b772d83be817aa01c911bfc8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pspl_1aa5293538b772d83be817aa01c911bfc8" kindref="member">N</ref>;</highlight></codeline>
-<codeline lineno="456" refid="class_p_r_1_1_p_s_pspl_1ac97232104903c00093da6ab3a1f01cf1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pspl_1ac97232104903c00093da6ab3a1f01cf1" kindref="member">fcount</ref>;</highlight></codeline>
-<codeline lineno="457" refid="class_p_r_1_1_p_s_pspl_1a9f5b165f27255297ac3d6d88f8d1d6a2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;::iterator<sp/><ref refid="class_p_r_1_1_p_s_pspl_1a9f5b165f27255297ac3d6d88f8d1d6a2" kindref="member">fit</ref>;</highlight></codeline>
-<codeline lineno="458"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="460" refid="class_p_r_1_1_p_s_pspl_1af5c92c57704a41091895daa0ec879572" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pspl_1af5c92c57704a41091895daa0ec879572" kindref="member">openNextBlob</ref>();</highlight></codeline>
-<codeline lineno="461"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="462"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="464" refid="class_p_r_1_1_p_s_pspl_1a616927352631db61f3f035edbb5df842" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_p_s_pspl_1a616927352631db61f3f035edbb5df842" kindref="member">PSPspl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="465"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="467" refid="class_p_r_1_1_p_s_pspl_1a5ff3e5af49872c8de1c3f13fd6f5ef10" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_p_s_pspl_1a5ff3e5af49872c8de1c3f13fd6f5ef10" kindref="member">~PSPspl</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="468"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="470"><highlight class="normal"></highlight></codeline>
-<codeline lineno="471" refid="class_p_r_1_1_p_s_pspl_1ad7a167749de40943fc65d3a17cf75cf7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_p_s_pspl_1ad7a167749de40943fc65d3a17cf75cf7" kindref="member">firstParticle</ref>();</highlight></codeline>
-<codeline lineno="472" refid="class_p_r_1_1_p_s_pspl_1a2e0e812854ced4ea81424e553605e6fc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_p_s_pspl_1a2e0e812854ced4ea81424e553605e6fc" kindref="member">nextParticle</ref>();</highlight></codeline>
-<codeline lineno="474"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="475"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="476"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="480" refid="class_p_r_1_1_tipsy" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_tipsy" kindref="compound">Tipsy</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_particle_reader" kindref="compound">ParticleReader</ref></highlight></codeline>
-<codeline lineno="481"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="482"><highlight class="normal"></highlight></codeline>
-<codeline lineno="483"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="484"><highlight class="normal"></highlight></codeline>
-<codeline lineno="485" refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">enum<sp/>class</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" kindref="member">TipsyType</ref><sp/>{<sp/><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9a8e5f3adee38c8fccc13c1f3be0143796" kindref="member">native</ref>,<sp/><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9a05e46a892c9f038a22dddb6b2877477c" kindref="member">xdr</ref>,<sp/><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9a90155b2515ab6ecfbb2275c03a47472a" kindref="member">bonsai</ref><sp/>};</highlight></codeline>
-<codeline lineno="486"><highlight class="normal"></highlight></codeline>
-<codeline lineno="487"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="489" refid="class_p_r_1_1_tipsy_1ad486d41fa373ead22ced9851919d0fa6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_tipsy_1ad486d41fa373ead22ced9851919d0fa6" kindref="member">files</ref>;</highlight></codeline>
-<codeline lineno="490"><highlight class="normal"></highlight></codeline>
-<codeline lineno="492" refid="class_p_r_1_1_tipsy_1a196f9443ea19812440e858c6b76c1461" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;::iterator<sp/><ref refid="class_p_r_1_1_tipsy_1a196f9443ea19812440e858c6b76c1461" kindref="member">curfile</ref>;</highlight></codeline>
-<codeline lineno="493"><highlight class="normal"></highlight></codeline>
-<codeline lineno="495" refid="class_p_r_1_1_tipsy_1a2d39f6045070a3c0f492c19932d97dfd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;TipsyReader::TipsyFile&gt;<sp/><ref refid="class_p_r_1_1_tipsy_1a2d39f6045070a3c0f492c19932d97dfd" kindref="member">ps</ref>;</highlight></codeline>
-<codeline lineno="496"><highlight class="normal"></highlight></codeline>
-<codeline lineno="498" refid="class_p_r_1_1_tipsy_1a98a9f8ee827371e340f26e45a98fd790" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_particle" kindref="compound">Particle</ref><sp/><ref refid="class_p_r_1_1_tipsy_1a98a9f8ee827371e340f26e45a98fd790" kindref="member">P</ref>;</highlight></codeline>
-<codeline lineno="499"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="501" refid="class_p_r_1_1_tipsy_1a781177372bc346ee137b101da29213e8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_tipsy_1a781177372bc346ee137b101da29213e8" kindref="member">curTypes</ref>;</highlight></codeline>
-<codeline lineno="502"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="504" refid="class_p_r_1_1_tipsy_1ac8211969e32fde3fd5ac6e2c76ecb560" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="class_p_r_1_1_tipsy_1ac8211969e32fde3fd5ac6e2c76ecb560" kindref="member">curName</ref>;</highlight></codeline>
-<codeline lineno="505"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="507" refid="class_p_r_1_1_tipsy_1a31178dc266e3e3bf35690698494a815c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a9e23dca62c8156c64da0dd973c28a605" kindref="member">Ngas</ref>,<sp/><ref refid="class_p_r_1_1_tipsy_1a31178dc266e3e3bf35690698494a815c" kindref="member">Ndark</ref>,<sp/><ref refid="class_p_r_1_1_tipsy_1a88be6d3b3b5bf441e76ee77ecb771c78" kindref="member">Nstar</ref>;</highlight></codeline>
-<codeline lineno="508"><highlight class="normal"></highlight></codeline>
-<codeline lineno="510" refid="class_p_r_1_1_tipsy_1a919d7144ab6e008ef75f604b339cd569" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" kindref="member">TipsyType</ref><sp/><ref refid="class_p_r_1_1_tipsy_1a919d7144ab6e008ef75f604b339cd569" kindref="member">ttype</ref>;</highlight></codeline>
-<codeline lineno="511"><highlight class="normal"></highlight></codeline>
-<codeline lineno="512"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="513"><highlight class="normal"></highlight></codeline>
-<codeline lineno="514" refid="class_p_r_1_1_tipsy_1a8704c791527d7a01c4dbea7d27a07f15" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_tipsy_1a8704c791527d7a01c4dbea7d27a07f15" kindref="member">Ptypes</ref>;</highlight></codeline>
-<codeline lineno="515" refid="class_p_r_1_1_tipsy_1a90f3dd570086ac3194d23b75c4c7a3e1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::unordered_map&lt;std::string,<sp/>int&gt;<sp/><ref refid="class_p_r_1_1_tipsy_1a90f3dd570086ac3194d23b75c4c7a3e1" kindref="member">findP</ref>;</highlight></codeline>
-<codeline lineno="516" refid="class_p_r_1_1_tipsy_1ae58f9aef468a7962caead2d067a2243e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1ae58f9aef468a7962caead2d067a2243e" kindref="member">ptype</ref>;</highlight></codeline>
-<codeline lineno="517"><highlight class="normal"></highlight></codeline>
-<codeline lineno="518" refid="class_p_r_1_1_tipsy_1a86eb068baf2da718ef595e81d9081965" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a86eb068baf2da718ef595e81d9081965" kindref="member">pcount</ref>;</highlight></codeline>
-<codeline lineno="519"><highlight class="normal"></highlight></codeline>
-<codeline lineno="520" refid="class_p_r_1_1_tipsy_1a14a5d4da099e3363c9227ad1420f6b5b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a14a5d4da099e3363c9227ad1420f6b5b" kindref="member">getNumbers</ref>();</highlight></codeline>
-<codeline lineno="521" refid="class_p_r_1_1_tipsy_1ad39e1a4e56ccfc26467519adabecdd43" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1ad39e1a4e56ccfc26467519adabecdd43" kindref="member">packParticle</ref>();</highlight></codeline>
-<codeline lineno="522" refid="class_p_r_1_1_tipsy_1aee9665014a8e0068abd90ef0e699fb4c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1aee9665014a8e0068abd90ef0e699fb4c" kindref="member">nextFile</ref>();</highlight></codeline>
-<codeline lineno="523"><highlight class="normal"></highlight></codeline>
-<codeline lineno="524"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="525"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="527" refid="class_p_r_1_1_tipsy_1adb35a9d48ae22cdc236d4dc4aaae4545" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_tipsy_1adb35a9d48ae22cdc236d4dc4aaae4545" kindref="member">Tipsy</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,</highlight></codeline>
-<codeline lineno="528"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" kindref="member">TipsyType</ref><sp/>type=<ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9a8e5f3adee38c8fccc13c1f3be0143796" kindref="member">TipsyType::native</ref>,</highlight></codeline>
-<codeline lineno="529"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="530"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="532" refid="class_p_r_1_1_tipsy_1a8a54becbffc8b8e84b31ade0e152e221" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_tipsy_1a8a54becbffc8b8e84b31ade0e152e221" kindref="member">Tipsy</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,</highlight></codeline>
-<codeline lineno="533"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" kindref="member">TipsyType</ref><sp/>type=<ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9a8e5f3adee38c8fccc13c1f3be0143796" kindref="member">TipsyType::native</ref>,</highlight></codeline>
-<codeline lineno="534"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="535"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="537" refid="class_p_r_1_1_tipsy_1a2582ba5fcc6bdb0868d695243570050c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a2582ba5fcc6bdb0868d695243570050c" kindref="member">~Tipsy</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="538"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="540" refid="class_p_r_1_1_tipsy_1ae9180a2edcf20c6902e4fd2bb9cc5f9f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="class_p_r_1_1_tipsy_1ae9180a2edcf20c6902e4fd2bb9cc5f9f" kindref="member">GetTypes</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a781177372bc346ee137b101da29213e8" kindref="member">curTypes</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="541"><highlight class="normal"></highlight></codeline>
-<codeline lineno="543" refid="class_p_r_1_1_tipsy_1a00ef302e96bd8bad1103ae5446295290" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a00ef302e96bd8bad1103ae5446295290" kindref="member">SelectType</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>type);</highlight></codeline>
-<codeline lineno="544"><highlight class="normal"></highlight></codeline>
-<codeline lineno="546" refid="class_p_r_1_1_tipsy_1ad92eead4b9155d00ae2707bda0e2f850" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1ad92eead4b9155d00ae2707bda0e2f850" kindref="member">CurrentNumber</ref>();</highlight></codeline>
-<codeline lineno="547"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="549" refid="class_p_r_1_1_tipsy_1a2a30817723dd66082d7c53385f2160e0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a2a30817723dd66082d7c53385f2160e0" kindref="member">CurrentTime</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_p_r_1_1_tipsy_1a2d39f6045070a3c0f492c19932d97dfd" kindref="member">ps</ref>-&gt;header.time;<sp/>}</highlight></codeline>
-<codeline lineno="550"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="552"><highlight class="normal"></highlight></codeline>
-<codeline lineno="553" refid="class_p_r_1_1_tipsy_1a947f48d1fbf5acdc58f012c46c7d0b42" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_tipsy_1a947f48d1fbf5acdc58f012c46c7d0b42" kindref="member">firstParticle</ref><sp/>();</highlight></codeline>
-<codeline lineno="554" refid="class_p_r_1_1_tipsy_1a614737fbbdddfde0987a85dbcbc926d4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref>*<sp/><ref refid="class_p_r_1_1_tipsy_1a614737fbbdddfde0987a85dbcbc926d4" kindref="member">nextParticle</ref>();</highlight></codeline>
-<codeline lineno="556"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="557"><highlight class="normal"></highlight></codeline>
-<codeline lineno="558" refid="namespace_p_r_1aa648448a7375649cf71073df2bbad4d1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;ParticleReader&gt;<sp/><ref refid="namespace_p_r_1aa648448a7375649cf71073df2bbad4d1" kindref="member">PRptr</ref>;</highlight></codeline>
-<codeline lineno="559"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="560"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="561"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="562"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="563"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="564"><highlight class="normal"><sp/><sp/></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_periodic_b_c_8_h.xml b/doxyxml/_periodic_b_c_8_h.xml
deleted file mode 100644
index e29a290..0000000
--- a/doxyxml/_periodic_b_c_8_h.xml
+++ /dev/null
@@ -1,492 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_periodic_b_c_8_h" kind="file" language="C++">
-    <compoundname>PeriodicBC.H</compoundname>
-    <includes local="no">random</includes>
-    <includes local="no">Particle.H</includes>
-    <includes refid="_axisymmetric_basis_8_h" local="no">AxisymmetricBasis.H</includes>
-    <includes refid="_external_collection_8_h" local="no">ExternalCollection.H</includes>
-    <incdepgraph>
-      <node id="37">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="51">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="35" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="52">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="24">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-      </node>
-      <node id="45">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="42" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="47" relation="include">
-        </childnode>
-      </node>
-      <node id="47">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="48" relation="include">
-        </childnode>
-      </node>
-      <node id="40">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="38">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="44">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="49">
-        <label>header.H</label>
-        <link refid="header_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-      </node>
-      <node id="27">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="39">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="35" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>AxisymmetricBasis.H</label>
-        <link refid="_axisymmetric_basis_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Basis.H</label>
-        <link refid="_basis_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="21">
-        <label>Component.H</label>
-        <link refid="_component_8_h"/>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-        <childnode refid="49" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="50" relation="include">
-        </childnode>
-        <childnode refid="51" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="52" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>ExternalCollection.H</label>
-        <link refid="_external_collection_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="53" relation="include">
-        </childnode>
-      </node>
-      <node id="53">
-        <label>ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="41">
-        <label>Orient.H</label>
-        <link refid="_orient_8_h"/>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-        <childnode refid="43" relation="include">
-        </childnode>
-        <childnode refid="44" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="45" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="50">
-        <label>ParticleFerry.H</label>
-        <link refid="_particle_ferry_8_h"/>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/PeriodicBC.H</label>
-        <link refid="_periodic_b_c_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_PeriodicBC_H</highlight><highlight class="normal"></highlight></codeline>
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diff --git a/doxyxml/_polar_basis_8_h.xml b/doxyxml/_polar_basis_8_h.xml
deleted file mode 100644
index 29e6465..0000000
--- a/doxyxml/_polar_basis_8_h.xml
+++ /dev/null
@@ -1,847 +0,0 @@
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-<codeline lineno="132" refid="class_polar_basis_1a3433ec168c294734e038b126ef4be6f1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a3433ec168c294734e038b126ef4be6f1" kindref="member">determine_coefficients_particles</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135" refid="class_polar_basis_1a64b464f89b72cc7755f75e828a9a6a87" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a64b464f89b72cc7755f75e828a9a6a87" kindref="member">determine_coefficients_playback</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"></highlight></codeline>
-<codeline lineno="137" refid="class_polar_basis_1a9cd5f130653fbfbabc6c6b53afbe3808" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;unsigned&gt;&gt;<sp/><ref refid="class_polar_basis_1a9cd5f130653fbfbabc6c6b53afbe3808" kindref="member">howmany1</ref>;</highlight></codeline>
-<codeline lineno="138" refid="class_polar_basis_1a193e8bdb15a1bee988c45b5a5d4cbb1b" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;unsigned&gt;<sp/><ref refid="class_polar_basis_1a193e8bdb15a1bee988c45b5a5d4cbb1b" kindref="member">howmany</ref>;</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="157" refid="struct_polar_basis_1_1_coef_vector" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_polar_basis_1_1_coef_vector" kindref="compound">CoefVector</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;VectorM&gt;&gt;</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="159" refid="struct_polar_basis_1_1_coef_vector_1a28a8d8a6cfca724246ccf7ae0ef66a0f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>&amp;<sp/><ref refid="struct_polar_basis_1_1_coef_vector_1a28a8d8a6cfca724246ccf7ae0ef66a0f" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((*</highlight><highlight class="keyword">this</highlight><highlight class="normal">)[i][j][m]);<sp/>}</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="struct_polar_basis_1_1_coef_matrix" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_polar_basis_1_1_coef_matrix" kindref="compound">CoefMatrix</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;MatrixM&gt;&gt;</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="164" refid="struct_polar_basis_1_1_coef_matrix_1a13eb0265c13ebbdc1a9e540bbaea8f31" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::MatrixXd<sp/>&amp;<sp/><ref refid="struct_polar_basis_1_1_coef_matrix_1a13eb0265c13ebbdc1a9e540bbaea8f31" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>j,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((*</highlight><highlight class="keyword">this</highlight><highlight class="normal">)[i][j][m]);<sp/>}</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Test<sp/>for<sp/>eof<sp/>trim</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="170" refid="class_polar_basis_1a35b9bc2b401b6ca50284052b22c16607" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt;&gt;<sp/><ref refid="class_polar_basis_1a35b9bc2b401b6ca50284052b22c16607" kindref="member">tvar</ref>;</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"></highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Error<sp/>analysis</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="173" refid="class_polar_basis_1acf405ea76324f560aa152c596de1228c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_polar_basis_1_1_coef_vector" kindref="compound">CoefVector</ref><sp/><sp/><ref refid="class_polar_basis_1acf405ea76324f560aa152c596de1228c" kindref="member">covV</ref>;</highlight></codeline>
-<codeline lineno="174" refid="class_polar_basis_1af841dfe17fd179e7cad33616f9584a0c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="struct_polar_basis_1_1_coef_matrix" kindref="compound">CoefMatrix</ref><sp/><sp/><ref refid="class_polar_basis_1af841dfe17fd179e7cad33616f9584a0c" kindref="member">covM</ref>;</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight></codeline>
-<codeline lineno="176" refid="class_polar_basis_1a3553fdf50173154f1854aed4be95253d" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;unsigned&gt;<sp/><sp/>&gt;<sp/><ref refid="class_polar_basis_1a3553fdf50173154f1854aed4be95253d" kindref="member">numbT1</ref>;</highlight></codeline>
-<codeline lineno="177" refid="class_polar_basis_1a92bf1bad9abede0a8634a3d9045c0dd2" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;double&gt;<sp/><sp/>&gt;<sp/><ref refid="class_polar_basis_1a92bf1bad9abede0a8634a3d9045c0dd2" kindref="member">massT1</ref>;</highlight></codeline>
-<codeline lineno="178" refid="class_polar_basis_1a118ccb84ebd70f359f9926d8f2829842" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;unsigned&gt;<sp/><ref refid="class_polar_basis_1a118ccb84ebd70f359f9926d8f2829842" kindref="member">numbT</ref>;</highlight></codeline>
-<codeline lineno="179" refid="class_polar_basis_1ae8dfb1cfd65cd8f4d753c0255a6a7ef8" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_polar_basis_1ae8dfb1cfd65cd8f4d753c0255a6a7ef8" kindref="member">massT</ref>;</highlight></codeline>
-<codeline lineno="180" refid="class_polar_basis_1a24a24c5e0ab5d4a85ead71fea374f812" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a3bd4a78d9444ffbbe83a56ae99bea773" kindref="member">sampT</ref>,<sp/><ref refid="class_polar_basis_1a24a24c5e0ab5d4a85ead71fea374f812" kindref="member">defSampT</ref>;</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="182" refid="class_polar_basis_1aeb57eed94e2c11e9a47ee9786b7c0b1a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_polar_basis_1aeb57eed94e2c11e9a47ee9786b7c0b1a" kindref="member">cylmass1</ref>;</highlight></codeline>
-<codeline lineno="183" refid="class_polar_basis_1a08dfe64d5a1733ffe27bde9b1bf16d51" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a08dfe64d5a1733ffe27bde9b1bf16d51" kindref="member">cylmass</ref>;</highlight></codeline>
-<codeline lineno="184" refid="class_polar_basis_1ace5aea039f333b325a02266bf91b518d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a0ba528379df5a33db38b6d1463e53b4d" kindref="member">minSNR</ref>,<sp/><ref refid="class_polar_basis_1ace5aea039f333b325a02266bf91b518d" kindref="member">maxSNR</ref>;</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"></highlight></codeline>
-<codeline lineno="186" refid="class_polar_basis_1a3197446ade65d9b4d17e381333aff246" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_polar_basis_1a3197446ade65d9b4d17e381333aff246" kindref="member">vc</ref>,<sp/><ref refid="class_polar_basis_1a22efaf97472b275a5cffe707f31a49e7" kindref="member">vs</ref>;</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"></highlight></codeline>
-<codeline lineno="188" refid="class_polar_basis_1adacb1bb523e1ed452d7075cf6b97135f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1adacb1bb523e1ed452d7075cf6b97135f" kindref="member">get_pot</ref>(Eigen::MatrixXd&amp;<sp/>Vc,<sp/>Eigen::MatrixXd&amp;<sp/>Vs,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191"></codeline>
-<codeline lineno="192" refid="class_polar_basis_1a62f0e567cfac40ee6c955aa9b46b331c" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/>&gt;<sp/><ref refid="class_polar_basis_1a14b747134e7a5e92e73f2c6cb6570a14" kindref="member">differS1</ref>,<sp/><ref refid="class_polar_basis_1a62f0e567cfac40ee6c955aa9b46b331c" kindref="member">differC1</ref>;</highlight></codeline>
-<codeline lineno="193" refid="class_polar_basis_1ad68931ee90a672f077a8ccaae1bc72df" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_polar_basis_1a9807aaaf18f9e1a8c36babf586dae852" kindref="member">workC1</ref>,<sp/><ref refid="class_polar_basis_1ad68931ee90a672f077a8ccaae1bc72df" kindref="member">workC</ref>,<sp/><ref refid="class_polar_basis_1a9ca96eb5c70ca2b17032fe5a2c0f813c" kindref="member">workS1</ref>,<sp/><ref refid="class_polar_basis_1aa664182951b12af8a5bc377a8421f849" kindref="member">workS</ref>;</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198" refid="class_polar_basis_1adfeabbff17849499d42172409cde90ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1adfeabbff17849499d42172409cde90ee" kindref="member">getRtable</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"></highlight></codeline>
-<codeline lineno="201"><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_coefficients_cuda(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute_pca);</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_acceleration_cuda();</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>multistep_update_cuda();</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/>thrust::host_vector&lt;cuFP_t&gt;<sp/>host_coefs,<sp/>host_massT;</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dev_coefs;</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/>std::vector&lt;thrust::host_vector&lt;cuFP_t&gt;&gt;<sp/>host_coefsT,<sp/>host_covarT;</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/>cuFP_t<sp/>host_mass_tot;</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>HtoD_coefs();</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>DtoH_coefs(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"></highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>coef_cuda_compare();</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"></highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/>std::vector&lt;cudaArray_t&gt;<sp/>cuInterpArray;</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/>thrust::host_vector&lt;cudaTextureObject_t&gt;<sp/>tex;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"></highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>destroy_cuda();</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/>cudaMappingConstants<sp/>ret;</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.rscale<sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.hscale<sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmin<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmax<sp/><sp/><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymin<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymax<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numr<sp/><sp/><sp/>=<sp/>100;</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numx<sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numy<sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dxi<sp/><sp/><sp/><sp/>=<sp/>1.0/(ret.numr-1);</highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dxi<sp/><sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.cmapR<sp/><sp/>=<sp/>1;</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>initialize_mapping_constants();</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>host_dev_force_compare();</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight></codeline>
-<codeline lineno="250"><highlight class="normal"></highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;cudaTextureObject_t&gt;<sp/>t_d;</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"></highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal">cudaStorage</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dN_coef;</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dc_coef;</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dw_coef;</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>df_coef;</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dN_tvar;</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dW_tvar;</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dc_tvar;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dw_tvar;</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>df_tvar;</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>m_d,<sp/>u_d,<sp/>X_d,<sp/>Y_d,<sp/>a_d,<sp/>p_d;</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;int<sp/><sp/><sp/>&gt;<sp/>iX_d,<sp/>iY_d;</highlight></codeline>
-<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;thrust::device_vector&lt;cuFP_t&gt;&gt;<sp/>T_covr;</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"></highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>resize_coefs(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Mmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>gridSize,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>stride,</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sampT,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>pca,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>pcaeof,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>subsamp);</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>resize_acc<sp/><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Mmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Nthread);</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"></highlight></codeline>
-<codeline lineno="275"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>get_coef(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>c)</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m<sp/>&gt;<sp/><sp/><ref refid="class_axisymmetric_basis_1a2307130cf92a81e6cfb6f69fb2279585" kindref="member">Mmax</ref>)</highlight></codeline>
-<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n<sp/>&gt;=<sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>)</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;=nmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(c<sp/>==<sp/></highlight><highlight class="charliteral">&apos;c&apos;</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m==0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_axisymmetric_basis_1afae69589bd4f7341ab42b8c48c22b707" kindref="member">expcoef</ref>[0])[n];</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_axisymmetric_basis_1afae69589bd4f7341ab42b8c48c22b707" kindref="member">expcoef</ref>[2*m-1])[n];</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_axisymmetric_basis_1afae69589bd4f7341ab42b8c48c22b707" kindref="member">expcoef</ref>[2*m])[n];</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_coef(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" kindref="member">mlevel</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>c)</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m<sp/>&gt;<sp/><sp/><ref refid="class_axisymmetric_basis_1a2307130cf92a81e6cfb6f69fb2279585" kindref="member">Mmax</ref>)</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n<sp/>&gt;=<sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>)</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;=nmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(c<sp/>==<sp/></highlight><highlight class="charliteral">&apos;c&apos;</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m==0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_polar_basis_1a15d95a42911345cf8a447f8b87dc0db4" kindref="member">expcoef0</ref>[0][0])[n];</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_polar_basis_1a15d95a42911345cf8a447f8b87dc0db4" kindref="member">expcoef0</ref>[0][2*m-1])[n];</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_polar_basis_1a15d95a42911345cf8a447f8b87dc0db4" kindref="member">expcoef0</ref>[0][2*m])[n];</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_coefT(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>T,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m<sp/>&gt;<sp/><sp/><ref refid="class_axisymmetric_basis_1a2307130cf92a81e6cfb6f69fb2279585" kindref="member">Mmax</ref>)</highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n<sp/>&gt;=<sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>)</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;=nmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(T<sp/>&gt;=<sp/><ref refid="class_polar_basis_1a3bd4a78d9444ffbbe83a56ae99bea773" kindref="member">sampT</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;(T=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>T<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&gt;=(sampT=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_polar_basis_1a3bd4a78d9444ffbbe83a56ae99bea773" kindref="member">sampT</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_axisymmetric_basis_1acd8494e7bb875fc2c8677ca92a0c6f01" kindref="member">expcoefT</ref>[T][m])[n];</highlight></codeline>
-<codeline lineno="322"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_covrT(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>T,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>o)</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m<sp/>&gt;<sp/><sp/><ref refid="class_axisymmetric_basis_1a2307130cf92a81e6cfb6f69fb2279585" kindref="member">Mmax</ref>)</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n<sp/>&gt;=<sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>)</highlight></codeline>
-<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;=nmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(o<sp/>&gt;=<sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>)</highlight></codeline>
-<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;o&gt;=nmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(T<sp/>&gt;=<sp/><ref refid="class_polar_basis_1a3bd4a78d9444ffbbe83a56ae99bea773" kindref="member">sampT</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;(T=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>T<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&gt;=(sampT=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_polar_basis_1a3bd4a78d9444ffbbe83a56ae99bea773" kindref="member">sampT</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*<ref refid="class_axisymmetric_basis_1acc9740eafab3aa6d3b935bb310c568bd" kindref="member">expcoefM</ref>[T][m])(n,<sp/>o);</highlight></codeline>
-<codeline lineno="342"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="344"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_tvar(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j)</highlight></codeline>
-<codeline lineno="345"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(m<sp/>&gt;<sp/><sp/><ref refid="class_axisymmetric_basis_1a2307130cf92a81e6cfb6f69fb2279585" kindref="member">Mmax</ref>)</highlight></codeline>
-<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;m&gt;mmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="348"><highlight class="normal"></highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i<sp/>&gt;=<sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref><sp/>or<sp/>j<sp/>&gt;=<sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>)</highlight></codeline>
-<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;n&gt;nmax&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"></highlight></codeline>
-<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a35b9bc2b401b6ca50284052b22c16607" kindref="member">tvar</ref>[0][m](i,<sp/>j);</highlight></codeline>
-<codeline lineno="353"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="354"><highlight class="normal"></highlight></codeline>
-<codeline lineno="355"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>set_massT(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>T)</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(T<sp/>&gt;=<sp/><ref refid="class_polar_basis_1a3bd4a78d9444ffbbe83a56ae99bea773" kindref="member">sampT</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;(T=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>T<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&gt;=(sampT=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_polar_basis_1a3bd4a78d9444ffbbe83a56ae99bea773" kindref="member">sampT</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;)&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="362"><highlight class="normal"></highlight></codeline>
-<codeline lineno="363"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a92bf1bad9abede0a8634a3d9045c0dd2" kindref="member">massT1</ref>[0][T];</highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="365"><highlight class="normal"></highlight></codeline>
-<codeline lineno="367"><highlight class="normal"><sp/><sp/>cudaStorage<sp/>cuS;</highlight></codeline>
-<codeline lineno="368"><highlight class="normal"></highlight></codeline>
-<codeline lineno="370"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>initialize_cuda_plr;</highlight></codeline>
-<codeline lineno="371"><highlight class="normal"></highlight></codeline>
-<codeline lineno="373"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_initialize();</highlight></codeline>
-<codeline lineno="374"><highlight class="normal"></highlight></codeline>
-<codeline lineno="376"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_zero_coefs();</highlight></codeline>
-<codeline lineno="378"><highlight class="normal"></highlight></codeline>
-<codeline lineno="379"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="380"><highlight class="normal"></highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::tuple&lt;double,<sp/>double,<sp/>double&gt;</highlight></codeline>
-<codeline lineno="383" refid="class_polar_basis_1a89ded72802c057e9900f24d493f9dce3" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_polar_basis_1a89ded72802c057e9900f24d493f9dce3" kindref="member">background</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{0.0,<sp/>0.0,<sp/>0.0};<sp/>}</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"></highlight></codeline>
-<codeline lineno="386" refid="class_polar_basis_1acaba49129ac6aeeb0d44e1ff25eb4e22" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_polar_basis_1acaba49129ac6aeeb0d44e1ff25eb4e22" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"></highlight></codeline>
-<codeline lineno="389" refid="class_polar_basis_1a678a5f22d42f8456b994a51afd6ed765" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a678a5f22d42f8456b994a51afd6ed765" kindref="member">mlim</ref>;</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="395" refid="class_polar_basis_1a3a0be17ee62bb4879aea655ae19edaa7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a3a0be17ee62bb4879aea655ae19edaa7" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"></highlight></codeline>
-<codeline lineno="398" refid="class_polar_basis_1adb549c80cf4c39ca310bd9de22c04c07" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1adb549c80cf4c39ca310bd9de22c04c07" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="399"><highlight class="normal"></highlight></codeline>
-<codeline lineno="401" refid="class_polar_basis_1ad09ca298def19fc208e57ef144ce16f6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1ad09ca298def19fc208e57ef144ce16f6" kindref="member">self_consistent</ref>;</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"></highlight></codeline>
-<codeline lineno="404" refid="class_polar_basis_1a915ee44780b239759e053a4fc36d8816" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a915ee44780b239759e053a4fc36d8816" kindref="member">NO_M0</ref>;</highlight></codeline>
-<codeline lineno="405"><highlight class="normal"></highlight></codeline>
-<codeline lineno="407" refid="class_polar_basis_1a3db7a5c1581abdbad2d411cef3337f05" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a3db7a5c1581abdbad2d411cef3337f05" kindref="member">NO_MONO</ref>;</highlight></codeline>
-<codeline lineno="408"><highlight class="normal"></highlight></codeline>
-<codeline lineno="410" refid="class_polar_basis_1a0bbb25e024f9e05ba4f0f09ddd29d38c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a0bbb25e024f9e05ba4f0f09ddd29d38c" kindref="member">NO_M1</ref>;</highlight></codeline>
-<codeline lineno="411"><highlight class="normal"></highlight></codeline>
-<codeline lineno="413" refid="class_polar_basis_1a8296f5a47fc5b64f7ca3bd40629996af" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a8296f5a47fc5b64f7ca3bd40629996af" kindref="member">EVEN_M</ref>;</highlight></codeline>
-<codeline lineno="414"><highlight class="normal"></highlight></codeline>
-<codeline lineno="416" refid="class_polar_basis_1a816312706a8b38652b6969ecb540fb83" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a816312706a8b38652b6969ecb540fb83" kindref="member">M0_only</ref>;</highlight></codeline>
-<codeline lineno="417"><highlight class="normal"></highlight></codeline>
-<codeline lineno="419" refid="class_polar_basis_1a4ac3897f3193cce28ec862d51862549c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a4ac3897f3193cce28ec862d51862549c" kindref="member">M0_back</ref>;</highlight></codeline>
-<codeline lineno="420"><highlight class="normal"></highlight></codeline>
-<codeline lineno="422" refid="class_polar_basis_1a3eea87c05c80ea26d61cf7fa851963b5" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_polar_basis_1a3eea87c05c80ea26d61cf7fa851963b5" kindref="member">meanC</ref>;</highlight></codeline>
-<codeline lineno="423"><highlight class="normal"></highlight></codeline>
-<codeline lineno="425" refid="class_polar_basis_1a2e121b84e9254efa5cbd308991c66e54" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_polar_basis_1a2e121b84e9254efa5cbd308991c66e54" kindref="member">rmsC</ref>;</highlight></codeline>
-<codeline lineno="426"><highlight class="normal"></highlight></codeline>
-<codeline lineno="428"><highlight class="normal"></highlight></codeline>
-<codeline lineno="429" refid="class_polar_basis_1a05fd3a74d0b2657ded0339a346cbf997" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a05fd3a74d0b2657ded0339a346cbf997" kindref="member">seedN</ref>;</highlight></codeline>
-<codeline lineno="430" refid="class_polar_basis_1a6101c6d9456396713bd0c589c27f85c9" refkind="member"><highlight class="normal"><sp/><sp/>std::mt19937<sp/><ref refid="class_polar_basis_1a6101c6d9456396713bd0c589c27f85c9" kindref="member">rgen</ref>;</highlight></codeline>
-<codeline lineno="431" refid="class_polar_basis_1a0068f61d14aec9c87ed6d9cc24e02b1d" refkind="member"><highlight class="normal"><sp/><sp/>std::normal_distribution&lt;&gt;<sp/><ref refid="class_polar_basis_1a0068f61d14aec9c87ed6d9cc24e02b1d" kindref="member">nrand</ref>;</highlight></codeline>
-<codeline lineno="433"></codeline>
-<codeline lineno="435" refid="class_polar_basis_1ab5d0ad742eec040c918d0a3398e0df5a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1ab5d0ad742eec040c918d0a3398e0df5a" kindref="member">ssfrac</ref>;</highlight></codeline>
-<codeline lineno="436"><highlight class="normal"></highlight></codeline>
-<codeline lineno="438" refid="class_polar_basis_1aade6058d4754068e3390aecc59241901" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1aade6058d4754068e3390aecc59241901" kindref="member">subset</ref>;</highlight></codeline>
-<codeline lineno="439"><highlight class="normal"></highlight></codeline>
-<codeline lineno="444" refid="class_polar_basis_1ab837dfe291f4c04c498805ad3d7899a5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1ab837dfe291f4c04c498805ad3d7899a5" kindref="member">compute_multistep_coefficients</ref>();</highlight></codeline>
-<codeline lineno="445"><highlight class="normal"></highlight></codeline>
-<codeline lineno="447"></codeline>
-<codeline lineno="448" refid="class_polar_basis_1afb8531a9c023e49bc2a2c112e47490eb" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;<sp/>vector&lt;Eigen::MatrixXd&gt;<sp/>&gt;<sp/><ref refid="class_polar_basis_1afb8531a9c023e49bc2a2c112e47490eb" kindref="member">differ1</ref>;</highlight></codeline>
-<codeline lineno="449" refid="class_polar_basis_1a99c0c982b5199a2f2f637d929def3782" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;<sp/>double<sp/>&gt;<sp/><ref refid="class_polar_basis_1a99c0c982b5199a2f2f637d929def3782" kindref="member">pack</ref>,<sp/><ref refid="class_polar_basis_1abca00424b2046864e5d8242ab314d299" kindref="member">unpack</ref>;</highlight></codeline>
-<codeline lineno="451"></codeline>
-<codeline lineno="455" refid="class_polar_basis_1a2ab3b12283586fff2210ef28df12f834" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a2ab3b12283586fff2210ef28df12f834" kindref="member">dump_coefs_all</ref>(ostream<sp/>&amp;);</highlight></codeline>
-<codeline lineno="456"><highlight class="normal"></highlight></codeline>
-<codeline lineno="458" refid="class_polar_basis_1a88caee4e6225bee5a620dd123944641a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a88caee4e6225bee5a620dd123944641a" kindref="member">cmagic</ref><sp/>=<sp/>0xc0a57a2;</highlight></codeline>
-<codeline lineno="459"><highlight class="normal"></highlight></codeline>
-<codeline lineno="461" refid="class_polar_basis_1a2751b7dbf6ebb3b067666e03470fcf58" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref><sp/>*<ref refid="class_polar_basis_1a2751b7dbf6ebb3b067666e03470fcf58" kindref="member">mix</ref>;</highlight></codeline>
-<codeline lineno="462"><highlight class="normal"></highlight></codeline>
-<codeline lineno="466" refid="class_polar_basis_1a4b5f9c6bef2c419f84b76fb396e82723" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CoefClasses::CylCoefs&gt;<sp/><ref refid="class_polar_basis_1a4b5f9c6bef2c419f84b76fb396e82723" kindref="member">playback</ref>;</highlight></codeline>
-<codeline lineno="467"><highlight class="normal"></highlight></codeline>
-<codeline lineno="474" refid="class_polar_basis_1a41aced55714de2c225f7a2f19fe3b596" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a41aced55714de2c225f7a2f19fe3b596" kindref="member">coefMaster</ref>;</highlight></codeline>
-<codeline lineno="475"><highlight class="normal"></highlight></codeline>
-<codeline lineno="477" refid="class_polar_basis_1a7e1ac0795981fe6cd99dc0ef4553f3a1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a7e1ac0795981fe6cd99dc0ef4553f3a1" kindref="member">lastPlayTime</ref>;</highlight></codeline>
-<codeline lineno="478"><highlight class="normal"></highlight></codeline>
-<codeline lineno="480" refid="class_polar_basis_1a79001ab9c1f4d7756828473039736910" refkind="member"><highlight class="normal"><sp/><sp/>CoefClasses::CylCoefs<sp/><ref refid="class_polar_basis_1a79001ab9c1f4d7756828473039736910" kindref="member">cylCoefs</ref>;</highlight></codeline>
-<codeline lineno="481"><highlight class="normal"></highlight></codeline>
-<codeline lineno="483" refid="class_polar_basis_1a80f934a93cbe526d28c6f8787b31b729" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_polar_basis_1a80f934a93cbe526d28c6f8787b31b729" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="484"><highlight class="normal"></highlight></codeline>
-<codeline lineno="486"></codeline>
-<codeline lineno="487" refid="class_polar_basis_1adfedd329d82bf29612dc7effb68d6527" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>pthread_mutex_t<sp/><ref refid="class_polar_basis_1a1e8407fa2d119488c94015b74b977e37" kindref="member">used_lock</ref>,<sp/><ref refid="class_polar_basis_1adfedd329d82bf29612dc7effb68d6527" kindref="member">cos_coef_lock</ref>,<sp/><ref refid="class_polar_basis_1a50c1a4d646f89ac3d9d07e9700a9ead1" kindref="member">sin_coef_lock</ref>;</highlight></codeline>
-<codeline lineno="489"><highlight class="normal"></highlight></codeline>
-<codeline lineno="490"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="491"><highlight class="normal"></highlight></codeline>
-<codeline lineno="493" refid="class_polar_basis_1ae3e10d1d2db082490f8a28b32915def5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1ae3e10d1d2db082490f8a28b32915def5" kindref="member">NewCoefs</ref>;</highlight></codeline>
-<codeline lineno="494"><highlight class="normal"></highlight></codeline>
-<codeline lineno="496" refid="class_polar_basis_1a45940af63c3a13154e29504458495c9d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_polar_basis_1a45940af63c3a13154e29504458495c9d" kindref="member">PolarBasis</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>,<sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref><sp/>*m=0);</highlight></codeline>
-<codeline lineno="497"><highlight class="normal"></highlight></codeline>
-<codeline lineno="499" refid="class_polar_basis_1aaa494cc1d1daa18fc49e97afc5921df0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_polar_basis_1aaa494cc1d1daa18fc49e97afc5921df0" kindref="member">PolarBasis</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis" kindref="compound">PolarBasis</ref>&amp;<sp/>p);</highlight></codeline>
-<codeline lineno="500"><highlight class="normal"></highlight></codeline>
-<codeline lineno="502" refid="class_polar_basis_1aea22978a077e0f22f369e48e96ef6af1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1aea22978a077e0f22f369e48e96ef6af1" kindref="member">~PolarBasis</ref>();</highlight></codeline>
-<codeline lineno="503"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="505"><highlight class="normal"></highlight></codeline>
-<codeline lineno="506" refid="class_polar_basis_1af3ccc880f0cc299abc8c603c7e9778e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1af3ccc880f0cc299abc8c603c7e9778e9" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/><ref refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" kindref="member">cC</ref>);</highlight></codeline>
-<codeline lineno="507"><highlight class="normal"></highlight></codeline>
-<codeline lineno="509"><highlight class="normal"></highlight></codeline>
-<codeline lineno="510" refid="class_polar_basis_1ad124f3ba09e1b792053c736294f6ddb7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1ad124f3ba09e1b792053c736294f6ddb7" kindref="member">determine_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="511"><highlight class="normal"></highlight></codeline>
-<codeline lineno="513" refid="class_polar_basis_1a6e26e359a05e6860626196e156475b6b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a6e26e359a05e6860626196e156475b6b" kindref="member">determine_coefficients</ref>(<ref refid="class_component" kindref="compound">Component</ref><sp/>*c)<sp/></highlight></codeline>
-<codeline lineno="514"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" kindref="member">cC</ref><sp/>=<sp/>c;<sp/><ref refid="class_polar_basis_1ad124f3ba09e1b792053c736294f6ddb7" kindref="member">determine_coefficients</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="515"><highlight class="normal"></highlight></codeline>
-<codeline lineno="517"><highlight class="normal"></highlight></codeline>
-<codeline lineno="518" refid="class_polar_basis_1acb8cf13811dc3e6d8556b70d00a4d8c6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1acb8cf13811dc3e6d8556b70d00a4d8c6" kindref="member">determine_acceleration_and_potential</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="519"><highlight class="normal"></highlight></codeline>
-<codeline lineno="525" refid="class_polar_basis_1a176f79dfddda7dae31a595259abf797b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a176f79dfddda7dae31a595259abf797b" kindref="member">multistep_reset</ref>();</highlight></codeline>
-<codeline lineno="526" refid="class_polar_basis_1ad8614d1a76923db9331a1080fdc7cf2b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1ad8614d1a76923db9331a1080fdc7cf2b" kindref="member">multistep_update_begin</ref>();</highlight></codeline>
-<codeline lineno="527" refid="class_polar_basis_1abd587da712635ad6b559671f10fa5b32" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1abd587da712635ad6b559671f10fa5b32" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>next,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="528" refid="class_polar_basis_1aea28de3f69eb403dab0bd5049e71d04e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1aea28de3f69eb403dab0bd5049e71d04e" kindref="member">multistep_update_finish</ref>();</highlight></codeline>
-<codeline lineno="530"></codeline>
-<codeline lineno="543"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="544" refid="class_polar_basis_1a35dcc79a47abe1c6de84dbdb9203896d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a35dcc79a47abe1c6de84dbdb9203896d" kindref="member">get_dpotl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>p,</highlight></codeline>
-<codeline lineno="545"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>dpr,<sp/>Eigen::MatrixXd&amp;<sp/>dpz,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="546"><highlight class="normal"></highlight></codeline>
-<codeline lineno="555"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="556" refid="class_polar_basis_1a5bd90a17ffb1b1f7e06fdb9a9861b9e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a5bd90a17ffb1b1f7e06fdb9a9861b9e9" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="557"><highlight class="normal"></highlight></codeline>
-<codeline lineno="566"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="567" refid="class_polar_basis_1a7e4f51d9a6cb765a29e4a90c6020b3fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a7e4f51d9a6cb765a29e4a90c6020b3fe" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::MatrixXd&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid)<sp/>=<sp/>0;</highlight></codeline>
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-<codeline lineno="580"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid)<sp/>=<sp/>0;</highlight></codeline>
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-<codeline lineno="583" refid="class_polar_basis_1a05e6a24b91fd7c8239bffa2df1bb9004" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><ref refid="class_polar_basis_1a05e6a24b91fd7c8239bffa2df1bb9004" kindref="member">determine_fields_at_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="584"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="585"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="586"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpoty,<sp/></highlight></codeline>
-<codeline lineno="587"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz);</highlight></codeline>
-<codeline lineno="588"><highlight class="normal"></highlight></codeline>
-<codeline lineno="590" refid="class_polar_basis_1a4d396e0af9e54f2f09009f05a5d95672" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1a4d396e0af9e54f2f09009f05a5d95672" kindref="member">determine_fields_at_point_sph</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>theta,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="591"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="592"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="593"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpott,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp);</highlight></codeline>
-<codeline lineno="594"><highlight class="normal"></highlight></codeline>
-<codeline lineno="595"><highlight class="normal"></highlight></codeline>
-<codeline lineno="597" refid="class_polar_basis_1aeef7e49e923b2a7bd510c99f10cdb19e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_polar_basis_1aeef7e49e923b2a7bd510c99f10cdb19e" kindref="member">determine_fields_at_point_cyl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="598"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="599"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="600"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp);</highlight></codeline>
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-<codeline lineno="610"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="611"><highlight class="normal"></highlight></codeline>
-<codeline lineno="612"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_pot_accel_8_h.xml b/doxyxml/_pot_accel_8_h.xml
deleted file mode 100644
index 915d7ff..0000000
--- a/doxyxml/_pot_accel_8_h.xml
+++ /dev/null
@@ -1,575 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_pot_accel_8_h" kind="file" language="C++">
-    <compoundname>PotAccel.H</compoundname>
-    <includes local="no">cstdlib</includes>
-    <includes local="no">string</includes>
-    <includes local="no">chrono</includes>
-    <includes local="no">list</includes>
-    <includes local="no">map</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">yaml-cpp/yaml.h</includes>
-    <includes local="no">Particle.H</includes>
-    <includes refid="_string_tok_8_h" local="no">StringTok.H</includes>
-    <includes refid="_yaml_check_8_h" local="no">YamlCheck.H</includes>
-    <includes local="no">config_exp.h</includes>
-    <includedby refid="_basis_8_h" local="no">/home/weinberg/Projects/EXP/src/Basis.H</includedby>
-    <includedby refid="_component_8_h" local="no">/home/weinberg/Projects/EXP/src/Component.H</includedby>
-    <includedby refid="_cube_8_h" local="no">/home/weinberg/Projects/EXP/src/Cube.H</includedby>
-    <includedby refid="_external_force_8_h" local="no">/home/weinberg/Projects/EXP/src/ExternalForce.H</includedby>
-    <includedby refid="_no_force_8_h" local="no">/home/weinberg/Projects/EXP/src/NoForce.H</includedby>
-    <includedby refid="_slab_s_l_8_h" local="no">/home/weinberg/Projects/EXP/src/SlabSL.H</includedby>
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-        <label>/home/weinberg/Projects/EXP/src/user/UserDisk.H</label>
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-        <label>/home/weinberg/Projects/EXP/src/user/UserHalo.H</label>
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-        <label>/home/weinberg/Projects/EXP/src/user/UserLogPot.H</label>
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-        <label>/home/weinberg/Projects/EXP/src/user/UserMW.H</label>
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-    </invincdepgraph>
-    <innerclass refid="struct_pot_accel_1_1_n_data" prot="public">PotAccel::NData</innerclass>
-    <innerclass refid="class_pot_accel" prot="public">PotAccel</innerclass>
-    <innerclass refid="structthrd__pass___pot_accel" prot="public">thrd_pass_PotAccel</innerclass>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="_pot_accel_8_h_1a721787e87ec6b2d633dfc2334d8ff339" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool ltdub</definition>
-        <argsstring>(const pair&lt; double, PotAccel::NData &gt; &amp;A, const pair&lt; double, PotAccel::NData &gt; &amp;B)</argsstring>
-        <name>ltdub</name>
-        <param>
-          <type>const pair&lt; double, <ref refid="struct_pot_accel_1_1_n_data" kindref="compound">PotAccel::NData</ref> &gt; &amp;</type>
-          <declname>A</declname>
-        </param>
-        <param>
-          <type>const pair&lt; double, <ref refid="struct_pot_accel_1_1_n_data" kindref="compound">PotAccel::NData</ref> &gt; &amp;</type>
-          <declname>B</declname>
-        </param>
-        <briefdescription>
-<para>Used for thread timing only (VERBOSE&gt;5) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="253" column="6" declfile="/home/weinberg/Projects/EXP/src/PotAccel.H" declline="253" declcolumn="6"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_PotAccel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_PotAccel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstdlib&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;chrono&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;list&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;yaml-cpp/yaml.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Particle.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_string_tok_8_h" kindref="compound">StringTok.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_yaml_check_8_h" kindref="compound">YamlCheck.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_component" kindref="compound">Component</ref>;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structthrd__pass___pot_accel" kindref="compound">thrd_pass_PotAccel</ref>;</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">std;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_pot_accel" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_pot_accel" kindref="compound">PotAccel</ref></highlight></codeline>
-<codeline lineno="31"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="35" refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::vector&lt;std::time_t&gt;<sp/><ref refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" kindref="member">TList</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Threading<sp/>stuff</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_pot_accel_1a125d7343a34d292a3e4a48a5d984cac4" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="structthrd__pass___pot_accel" kindref="compound">thrd_pass_PotAccel</ref><sp/>*<ref refid="class_pot_accel_1a125d7343a34d292a3e4a48a5d984cac4" kindref="member">td</ref>;</highlight></codeline>
-<codeline lineno="41" refid="class_pot_accel_1aff158a74d7328a080ed619c1456836f5" refkind="member"><highlight class="normal"><sp/><sp/>pthread_t<sp/>*<ref refid="class_pot_accel_1aff158a74d7328a080ed619c1456836f5" kindref="member">t</ref>;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"></codeline>
-<codeline lineno="53" refid="class_pot_accel_1a73976f361ed7abf13001835bfcdee639" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a73976f361ed7abf13001835bfcdee639" kindref="member">nbodies</ref>;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="56" refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component" kindref="compound">Component</ref><sp/>*<ref refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" kindref="member">component</ref>;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component" kindref="compound">Component</ref><sp/>*<ref refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" kindref="member">cC</ref>;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68" refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" kindref="member">use_external</ref>;</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" kindref="member">coef_dump</ref>;</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" kindref="member">play_back</ref>;</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" kindref="member">play_cnew</ref>;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" kindref="member">mlevel</ref>;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_pot_accel_1a4315e73a641c54eefc548b7d14cb06b6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" kindref="member">TList</ref><sp/><ref refid="class_pot_accel_1a4315e73a641c54eefc548b7d14cb06b6" kindref="member">timer_list</ref>;</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" kindref="member">cuda_aware</ref>;</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94" refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" refkind="member"><highlight class="normal"><sp/><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" kindref="member">current_keys</ref>;</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="struct_pot_accel_1_1_n_data" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_pot_accel_1_1_n_data" kindref="compound">NData</ref><sp/>{</highlight></codeline>
-<codeline lineno="100" refid="struct_pot_accel_1_1_n_data_1a670ee1199a2e894456a9da537dada27b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_pot_accel_1_1_n_data_1a670ee1199a2e894456a9da537dada27b" kindref="member">node</ref>;</highlight></codeline>
-<codeline lineno="101" refid="struct_pot_accel_1_1_n_data_1a73ef2eda0e2273e036cecbd7d63acf37" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_pot_accel_1_1_n_data_1a73ef2eda0e2273e036cecbd7d63acf37" kindref="member">tid</ref>;</highlight></codeline>
-<codeline lineno="102" refid="struct_pot_accel_1_1_n_data_1a87c7cde8c24f051e2c261caf45ad1c02" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="struct_pot_accel_1_1_n_data_1a87c7cde8c24f051e2c261caf45ad1c02" kindref="member">name</ref>;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="class_pot_accel_1a1cdb2381070d7772caf533433455284c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a1cdb2381070d7772caf533433455284c" kindref="member">id</ref>;</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109" refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fd" kindref="member">Geometry</ref><sp/>{<ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda996ce4577548b6da6b1330a78b1c6f6a" kindref="member">sphere</ref>,<sp/><ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" kindref="member">cylinder</ref>,<sp/><ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" kindref="member">cube</ref>,<sp/><ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda0a1acd8c0d6e745fb0ae3e33e458a9b8" kindref="member">slab</ref>,<sp/><ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda1792d3c00a41ee78957c83611fd368a2" kindref="member">table</ref>,<sp/><ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda7c49f38007dad33fb1e48fdebdd2f8c1" kindref="member">other</ref>};</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="class_pot_accel_1ade38f6ecdf80f80cde847d463b14909b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::map&lt;Geometry,<sp/>std::string&gt;<sp/><ref refid="class_pot_accel_1ade38f6ecdf80f80cde847d463b14909b" kindref="member">geoname</ref>;</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115" refid="class_pot_accel_1adb6ef0bdae7d3520ca1f9fd8a6d648ea" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fd" kindref="member">Geometry</ref><sp/><ref refid="class_pot_accel_1adb6ef0bdae7d3520ca1f9fd8a6d648ea" kindref="member">geometry</ref>;</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_pot_accel_1a6a9ec23d29b553c1625bd8e88fe7692d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a6a9ec23d29b553c1625bd8e88fe7692d" kindref="member">dof</ref>;</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124" refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" kindref="member">PotAccel</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127" refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" kindref="member">~PotAccel</ref>();</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="130" refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref><sp/>*c)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135" refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8" kindref="member">determine_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="136" refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724" kindref="member">determine_coefficients</ref>(<ref refid="class_component" kindref="compound">Component</ref><sp/>*c)<sp/></highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" kindref="member">cC</ref><sp/>=<sp/>c;<sp/><ref refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8" kindref="member">determine_coefficients</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="139"></codeline>
-<codeline lineno="141" refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49" kindref="member">determine_coefficients_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="144" refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148" refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>pthread_mutex_t<sp/><ref refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" kindref="member">cc_lock</ref>;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151" refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" kindref="member">compute</ref>;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="154" refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb" kindref="member">RegisterComponent</ref>(<ref refid="class_component" kindref="compound">Component</ref><sp/>*c)<sp/>{<sp/><ref refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" kindref="member">component</ref><sp/>=<sp/>c;<sp/>}</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"></highlight></codeline>
-<codeline lineno="157" refid="class_pot_accel_1acd32c6464b705469911df718114187b9" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;int&gt;<sp/><ref refid="class_pot_accel_1acd32c6464b705469911df718114187b9" kindref="member">use</ref>;</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160" refid="class_pot_accel_1abee9651463af53460b622250d311329e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1abee9651463af53460b622250d311329e" kindref="member">exp_thread_fork</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>coef);</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="163" refid="class_pot_accel_1a65fa890eea987e18d552825ab074939b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a65fa890eea987e18d552825ab074939b" kindref="member">make_mutex</ref>(pthread_mutex_t<sp/>*m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*caller,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*name);</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166" refid="class_pot_accel_1a706b04f03c8beb4369dd125406770116" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a706b04f03c8beb4369dd125406770116" kindref="member">kill_mutex</ref>(pthread_mutex_t<sp/>*m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*caller,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*name);</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169" refid="class_pot_accel_1ae2e0dbf849707704a3d42a1fa91ce060" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ae2e0dbf849707704a3d42a1fa91ce060" kindref="member">Used</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" kindref="member">used</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="172" refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" kindref="member">SetExternal</ref>()<sp/>{<sp/><ref refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" kindref="member">use_external</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight></codeline>
-<codeline lineno="175" refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" kindref="member">ClearExternal</ref>()<sp/>{<sp/><ref refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" kindref="member">use_external</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"></highlight></codeline>
-<codeline lineno="178" refid="class_pot_accel_1a4a812594dff363f07bf57d69a60e4a13" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a4a812594dff363f07bf57d69a60e4a13" kindref="member">HaveCoefDump</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" kindref="member">coef_dump</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181" refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf" kindref="member">dump_coefs</ref>(ostream<sp/>&amp;out)<sp/>{};</highlight></codeline>
-<codeline lineno="182" refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c" kindref="member">dump_coefs_h5</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;<ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>)<sp/>{};</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"></highlight></codeline>
-<codeline lineno="190" refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381" kindref="member">multistep_update_begin</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193" refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>next,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">)<sp/>{}</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196" refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e" kindref="member">multistep_update_finish</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>multistep_update_cuda()<sp/>{}</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="202"><highlight class="normal"></highlight></codeline>
-<codeline lineno="204" refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" kindref="member">set_multistep_level</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/><ref refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" kindref="member">mlevel</ref>=n;<sp/>}</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight></codeline>
-<codeline lineno="207" refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f" kindref="member">multistep_reset</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"></highlight></codeline>
-<codeline lineno="210" refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121" kindref="member">multistep_debug</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"></highlight></codeline>
-<codeline lineno="213" refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" kindref="member">setScale</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>s)<sp/>{<sp/><ref refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" kindref="member">scale</ref><sp/>=<sp/>s;<sp/>}</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"></highlight></codeline>
-<codeline lineno="216" refid="class_pot_accel_1a0998c361bca277b3bba95f59acaba203" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a0998c361bca277b3bba95f59acaba203" kindref="member">getScale</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" kindref="member">scale</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"></highlight></codeline>
-<codeline lineno="219" refid="class_pot_accel_1a4f2099b1b705731b909e63c90ea59f04" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a4f2099b1b705731b909e63c90ea59f04" kindref="member">NoCoefs</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" kindref="member">play_back</ref><sp/>and<sp/>!<ref refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" kindref="member">play_cnew</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight></codeline>
-<codeline lineno="222"></codeline>
-<codeline lineno="223" refid="class_pot_accel_1a5e257d38dbf5c3d9630906a96abf6915" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a5e257d38dbf5c3d9630906a96abf6915" kindref="member">print_timings</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;,<sp/><ref refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" kindref="member">TList</ref>&amp;<sp/>tlist);</highlight></codeline>
-<codeline lineno="224" refid="class_pot_accel_1a37a3c348c0febbf70ff94949071c3beb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a37a3c348c0febbf70ff94949071c3beb" kindref="member">print_timings</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>label);</highlight></codeline>
-<codeline lineno="225" refid="class_pot_accel_1a86d0d012a44e2eb7c3e385d852a5fdde" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a86d0d012a44e2eb7c3e385d852a5fdde" kindref="member">thread_timing_beg</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="226" refid="class_pot_accel_1a76c805cd8d0d134d37929eeb48115b33" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a76c805cd8d0d134d37929eeb48115b33" kindref="member">thread_timing_end</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="228"></codeline>
-<codeline lineno="230" refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" kindref="member">atol</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>val)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ae3e23f0c0cd22fcc076fea458d657d42" kindref="member">atoi</ref>(val.c_str())<sp/>?<sp/>true<sp/>:<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233" refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" kindref="member">cudaAware</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" kindref="member">cuda_aware</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight></codeline>
-<codeline lineno="236" refid="class_pot_accel_1a0355cfe43cdde5237f7be234e94de64b" refkind="member"><highlight class="normal"><sp/><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_pot_accel_1a0355cfe43cdde5237f7be234e94de64b" kindref="member">unmatched</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" kindref="member">current_keys</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight></codeline>
-<codeline lineno="238"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241" refid="structthrd__pass___pot_accel" refkind="compound"><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structthrd__pass___pot_accel" kindref="compound">thrd_pass_PotAccel</ref><sp/></highlight></codeline>
-<codeline lineno="242"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="244" refid="structthrd__pass___pot_accel_1a942205c6b66936d893861394e91dd058" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_pot_accel" kindref="compound">PotAccel</ref><sp/>*<ref refid="structthrd__pass___pot_accel_1a942205c6b66936d893861394e91dd058" kindref="member">t</ref>;</highlight></codeline>
-<codeline lineno="246" refid="structthrd__pass___pot_accel_1aa937d3332f5d4196f946a9d3699ee27e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structthrd__pass___pot_accel_1aa937d3332f5d4196f946a9d3699ee27e" kindref="member">coef</ref>;</highlight></codeline>
-<codeline lineno="248" refid="structthrd__pass___pot_accel_1a22e6dffd02de47a787874995b21fbd57" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="structthrd__pass___pot_accel_1a22e6dffd02de47a787874995b21fbd57" kindref="member">id</ref>;</highlight></codeline>
-<codeline lineno="249"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"></highlight></codeline>
-<codeline lineno="251"><highlight class="normal"></highlight></codeline>
-<codeline lineno="253" refid="_pot_accel_8_h_1a721787e87ec6b2d633dfc2334d8ff339" refkind="member"><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="_pot_accel_8_h_1a721787e87ec6b2d633dfc2334d8ff339" kindref="member">ltdub</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>pair&lt;double,<sp/>PotAccel::NData&gt;&amp;<sp/>A,<sp/></highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>pair&lt;double,<sp/>PotAccel::NData&gt;&amp;<sp/>B);</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"></highlight></codeline>
-<codeline lineno="256"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>_PotAccel_H</highlight><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/PotAccel.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_pot_r_z_8_h.xml b/doxyxml/_pot_r_z_8_h.xml
deleted file mode 100644
index 5fed8eb..0000000
--- a/doxyxml/_pot_r_z_8_h.xml
+++ /dev/null
@@ -1,212 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_pot_r_z_8_h" kind="file" language="C++">
-    <compoundname>PotRZ.H</compoundname>
-    <includes refid="_q_d_h_t_8_h" local="no">QDHT.H</includes>
-    <includes local="no">cmath</includes>
-    <incdepgraph>
-      <node id="9">
-        <label>EXPmath.H</label>
-        <link refid="_e_x_pmath_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/PotRZ.H</label>
-        <link refid="_pot_r_z_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>QDHT.H</label>
-        <link refid="_q_d_h_t_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="4">
-        <label>algorithm</label>
-      </node>
-      <node id="5">
-        <label>chrono</label>
-      </node>
-      <node id="7">
-        <label>cmath</label>
-      </node>
-      <node id="3">
-        <label>functional</label>
-      </node>
-      <node id="6">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_pot_r_z" prot="public">PotRZ</innerclass>
-    <innerclass refid="class_pot_r_z_1_1_sk" prot="protected">PotRZ::Sk</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_PotRZ_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_PotRZ_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_q_d_h_t_8_h" kindref="compound">QDHT.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_pot_r_z" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_pot_r_z" kindref="compound">PotRZ</ref></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15" refid="class_pot_r_z_1ac9418a8a416f340d0e6374ebd21dfde4" refkind="member"><highlight class="normal"><sp/><sp/>std::function&lt;double(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/><ref refid="class_pot_r_z_1ac9418a8a416f340d0e6374ebd21dfde4" kindref="member">mass</ref>;</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="18" refid="class_pot_r_z_1_1_sk" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_pot_r_z_1_1_sk" kindref="compound">Sk</ref></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" kindref="member">N</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref><sp/><ref refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" kindref="member">v</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="28" refid="class_pot_r_z_1_1_sk_1a9b29e6af601361c3725faa652a6069e0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_pot_r_z_1_1_sk_1a9b29e6af601361c3725faa652a6069e0" kindref="member">Sk</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_pot_r_z_1_1_sk_1a1a01e40c1096829cbd337c6d89a14267" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_pot_r_z_1_1_sk_1a1a01e40c1096829cbd337c6d89a14267" kindref="member">Sk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" kindref="member">N</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>)<sp/>:<sp/><ref refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" kindref="member">N</ref>(<ref refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" kindref="member">N</ref>)</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" kindref="member">v</ref><sp/>=<sp/><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>,<sp/><ref refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" kindref="member">N</ref>,<sp/>R);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/>std::tuple&lt;Eigen::VectorXd,<sp/>Eigen::VectorXd&gt;</highlight></codeline>
-<codeline lineno="39" refid="class_pot_r_z_1_1_sk_1afde061a179f038a2394ff2135f523d91" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_pot_r_z_1_1_sk_1afde061a179f038a2394ff2135f523d91" kindref="member">operator()</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>dens)</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>r<sp/>=<sp/><ref refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" kindref="member">v</ref>.<ref refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" kindref="member">getR</ref>();</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>f(<ref refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" kindref="member">N</ref>);</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;<ref refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" kindref="member">N</ref>;<sp/>i++)<sp/>f[i]<sp/>=<sp/>dens(r[i]);</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" kindref="member">v</ref>.<ref refid="class_q_d_h_t_1a544bb6c7f92c9b89b14e77893a384a3b" kindref="member">getK</ref>(),<sp/><ref refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" kindref="member">v</ref>(f)};</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref><sp/><ref refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" kindref="member">v</ref>,<sp/><ref refid="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" kindref="member">vm</ref>,<sp/><ref refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" kindref="member">vp</ref>;</highlight></codeline>
-<codeline lineno="52" refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_pot_r_z_1_1_sk" kindref="compound">Sk</ref><sp/><sp/><sp/><ref refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" kindref="member">u</ref>;</highlight></codeline>
-<codeline lineno="53" refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" kindref="member">PotRZ</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>)<sp/>:<sp/><ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>)</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" kindref="member">v</ref><sp/>=<sp/><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>,<sp/>N,<sp/>R);</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" kindref="member">u</ref><sp/>=<sp/><ref refid="class_pot_r_z_1_1_sk" kindref="compound">Sk</ref>(R,<sp/>N,<sp/><ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>);</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>&gt;0)<sp/><ref refid="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" kindref="member">vm</ref><sp/>=<sp/><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>-1,<sp/>N,<sp/>R);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" kindref="member">vp</ref><sp/>=<sp/><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>+1,<sp/>N,<sp/>R);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum<sp/>class</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49" kindref="member">Field</ref><sp/>{<sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">potential</ref>,<sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a0412371a6f379b32238a840927f69a59" kindref="member">rforce</ref>,<sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a7d99b11816e890714319466b5641071e" kindref="member">zforce</ref><sp/>};</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" refkind="member"><highlight class="normal"><sp/><sp/>std::tuple&lt;Eigen::VectorXd,<sp/>Eigen::VectorXd&gt;<sp/>operator()</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>std::function&lt;double(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>dens,<sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49" kindref="member">Field</ref><sp/>f=<ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">Field::potential</ref>)</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>k,<sp/>S,<sp/>Sm,<sp/>Sp;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/>std::tie(k,<sp/>S)<sp/>=<sp/><ref refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" kindref="member">u</ref>(dens);</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(f<sp/>==<sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a0412371a6f379b32238a840927f69a59" kindref="member">Field::rforce</ref>)<sp/>{<sp/>Sm.resize(k.size());<sp/>Sp.resize(k.size());<sp/>}</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Prepare<sp/>the<sp/>transform<sp/>for<sp/>the<sp/>desired<sp/>output<sp/>field</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;k.size();<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">switch</highlight><highlight class="normal"><sp/>(f)<sp/>{</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">case</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">Field::potential</ref>:</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>S[i]<sp/>=<sp/>exp(-k[i]*fabs(z))/k[i]<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">case</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a7d99b11816e890714319466b5641071e" kindref="member">Field::zforce</ref>:</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(z&gt;=0)</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>S[i]<sp/>=<sp/><sp/>exp(-k[i]*z)<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>S[i]<sp/>=<sp/>-exp(<sp/>k[i]*z)<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">case</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a0412371a6f379b32238a840927f69a59" kindref="member">Field::rforce</ref>:</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>&gt;0)<sp/>Sm[i]<sp/>=<sp/>-exp(-k[i]*fabs(z))<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Sp[i]<sp/>=<sp/>-exp(-k[i]*fabs(z))<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Compute<sp/>the<sp/>inverse<sp/>transform</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(f==<ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">Field::potential</ref><sp/>or<sp/>f==<ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a7d99b11816e890714319466b5641071e" kindref="member">Field::zforce</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Potential<sp/>or<sp/>zforce</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" kindref="member">v</ref>.<ref refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" kindref="member">getR</ref>(),<sp/><ref refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" kindref="member">v</ref>(S,<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)};</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Derivative<sp/>recursion</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>==0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" kindref="member">v</ref>.<ref refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" kindref="member">getR</ref>(),<sp/>-<ref refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" kindref="member">vp</ref>(Sp,<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)};</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" kindref="member">v</ref>.<ref refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" kindref="member">getR</ref>(),<sp/>(<ref refid="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" kindref="member">vm</ref>(Sm,<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/>-<sp/><ref refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" kindref="member">vp</ref>(Sp,<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">))*0.5};</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_pot_r_z_1aa605b2c0e95c83b100b9a151cf665ae6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>operator()</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>std::function&lt;double(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>dens,<sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49" kindref="member">Field</ref><sp/>f=<ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">Field::potential</ref>)</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>k,<sp/>S,<sp/>Sm,<sp/>Sp;</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/>std::tie(k,<sp/>S)<sp/>=<sp/><ref refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" kindref="member">u</ref>(dens);</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(f<sp/>==<sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a0412371a6f379b32238a840927f69a59" kindref="member">Field::rforce</ref>)<sp/>{<sp/>Sm.resize(k.size());<sp/>Sp.resize(k.size());<sp/>}</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Prepare<sp/>the<sp/>transform<sp/>for<sp/>the<sp/>desired<sp/>output<sp/>field</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;k.size();<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">switch</highlight><highlight class="normal"><sp/>(f)<sp/>{</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">case</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">Field::potential</ref>:</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>S[i]<sp/>=<sp/>exp(-k[i]*fabs(z))/k[i]<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">case</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a7d99b11816e890714319466b5641071e" kindref="member">Field::zforce</ref>:</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(z<sp/>&gt;=<sp/>0.0)</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>S[i]<sp/>=<sp/><sp/>exp(-k[i]*z)<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>S[i]<sp/>=<sp/>-exp(<sp/>k[i]*z)<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">case</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a0412371a6f379b32238a840927f69a59" kindref="member">Field::rforce</ref>:</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>&gt;0)<sp/>Sm[i]<sp/>=<sp/>-exp(-k[i]*fabs(z))<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Sp[i]<sp/>=<sp/>-exp(-k[i]*fabs(z))<sp/>*<sp/>S[i]<sp/>*<sp/>2.0*M_PI;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Perform<sp/>the<sp/>inverse</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(f==<ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">Field::potential</ref><sp/>or<sp/>f==<ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a7d99b11816e890714319466b5641071e" kindref="member">Field::zforce</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Potential<sp/>or<sp/>zforce</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" kindref="member">v</ref>(r,<sp/>S);</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Derivative<sp/>recursion</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" kindref="member">M</ref>==0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" kindref="member">vp</ref>(r,<sp/>Sp);</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" kindref="member">vm</ref>(r,<sp/>Sm)<sp/>-<sp/><ref refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" kindref="member">vp</ref>(r,<sp/>Sp))*0.5;</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"></highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/>std::tuple&lt;Eigen::VectorXd,<sp/>Eigen::VectorXd&gt;</highlight></codeline>
-<codeline lineno="156" refid="class_pot_r_z_1a946c0104998195fd35f0a87a19171b59" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_pot_r_z_1a946c0104998195fd35f0a87a19171b59" kindref="member">getKT</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>func)</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" kindref="member">u</ref>(func);</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="160"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/PotRZ.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_progress_8_h.xml b/doxyxml/_progress_8_h.xml
deleted file mode 100644
index 1ea51bc..0000000
--- a/doxyxml/_progress_8_h.xml
+++ /dev/null
@@ -1,134 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_progress_8_h" kind="file" language="C++">
-    <compoundname>Progress.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">string</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/Progress.H</label>
-        <link refid="_progress_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="3">
-        <label>string</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="classprogress_1_1progress__display" prot="public">progress::progress_display</innerclass>
-    <innernamespace refid="namespaceprogress">progress</innernamespace>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/><sp/>Copyright<sp/>Beman<sp/>Dawes<sp/>1994-99.<sp/><sp/>Distributed<sp/>under<sp/>the<sp/>Boost</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>Software<sp/>License,<sp/>Version<sp/>1.0.<sp/>(See<sp/>accompanying<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>LICENSE_1_0.txt<sp/>or<sp/>copy<sp/>at<sp/>http://www.boost.org/LICENSE_1_0.txt)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>See<sp/>http://www.boost.org/libs/timer<sp/>for<sp/>documentation.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>Revision<sp/>History</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/>1<sp/>Dec<sp/>01<sp/><sp/>Add<sp/>leading<sp/>progress<sp/>display<sp/>strings<sp/>(suggested<sp/>by<sp/>Toon<sp/>Knapen)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>20<sp/>May<sp/>01<sp/><sp/>Introduce<sp/>several<sp/>static_casts&lt;&gt;<sp/>to<sp/>eliminate<sp/>warning<sp/>messages</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(Fixed<sp/>by<sp/>Beman,<sp/>reported<sp/>by<sp/>Herve<sp/>Bronnimann)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>12<sp/>Jan<sp/>01<sp/><sp/>Change<sp/>to<sp/>inline<sp/>implementation<sp/>to<sp/>allow<sp/>use<sp/>without<sp/>library</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>builds.<sp/>See<sp/>docs<sp/>for<sp/>more<sp/>rationale.<sp/>(Beman<sp/>Dawes)<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>22<sp/>Jul<sp/>99<sp/><sp/>Name<sp/>changed<sp/>to<sp/>.hpp</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>16<sp/>Jul<sp/>99<sp/><sp/>Second<sp/>beta</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/><sp/>6<sp/>Jul<sp/>99<sp/><sp/>Initial<sp/>boost<sp/>version</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>15<sp/>Nov<sp/>20<sp/><sp/>Stripped<sp/>from<sp/>boost<sp/>with<sp/>timer<sp/>removed<sp/>by<sp/>MDW</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>PROGRESS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>PROGRESS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>for<sp/>ostream,<sp/>cout,<sp/>etc</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>for<sp/>string</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="namespaceprogress" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespaceprogress" kindref="compound">progress</ref><sp/>{</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>progress_display<sp/><sp/>--------------------------------------------------------//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>progress_display<sp/>displays<sp/>an<sp/>appropriate<sp/>indication<sp/>of<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>progress<sp/>at<sp/>an<sp/>appropriate<sp/>place<sp/>in<sp/>an<sp/>appropriate<sp/>form.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight><highlight class="comment">//<sp/>NOTE:<sp/>(Jan<sp/>12,<sp/>2001)<sp/>Tried<sp/>to<sp/>change<sp/>unsigned<sp/>long<sp/>to<sp/>boost::uintmax_t,<sp/>but</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="comment">//<sp/>found<sp/>some<sp/>compilers<sp/>couldn&apos;t<sp/>handle<sp/>the<sp/>required<sp/>conversion<sp/>to<sp/>double.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Reverted<sp/>to<sp/>unsigned<sp/>long<sp/>until<sp/>the<sp/>compilers<sp/>catch<sp/>up.<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="classprogress_1_1progress__display" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classprogress_1_1progress__display" kindref="compound">progress_display</ref></highlight></codeline>
-<codeline lineno="37"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="39" refid="classprogress_1_1progress__display_1a0c5dbbd210b906fea6360f7f4f29a07a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classprogress_1_1progress__display_1a0c5dbbd210b906fea6360f7f4f29a07a" kindref="member">progress_display</ref>(<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/>expected_count_,</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::ostream<sp/>&amp;<sp/>os<sp/>=<sp/>std::cout,</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;<sp/>s1<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;\n&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="comment">//leading<sp/>strings</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;<sp/>s2<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;<sp/>s3<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"><sp/>)</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>os<sp/>is<sp/>hint;<sp/>implementation<sp/>may<sp/>ignore,<sp/>particularly<sp/>in<sp/>embedded<sp/>systems</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/>:<sp/><ref refid="classprogress_1_1progress__display_1af4d647b3bca28ef06e058f050fca85ad" kindref="member">m_os</ref>(os),<sp/><ref refid="classprogress_1_1progress__display_1a7edcb2af956a49221fd23af72ab11e68" kindref="member">m_s1</ref>(s1),<sp/><ref refid="classprogress_1_1progress__display_1ab543eb5ce132702f32ee7742312c6348" kindref="member">m_s2</ref>(s2),<sp/><ref refid="classprogress_1_1progress__display_1a23ec7365f5ae0e412a22678e3ee40e57" kindref="member">m_s3</ref>(s3)<sp/>{<sp/><ref refid="global_8_h_1a8649fdfafe4f3ed5fa96bb5261379247" kindref="member">restart</ref>(expected_count_);<sp/>}</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="classprogress_1_1progress__display_1a69ad1829f9bc76cec1d350741b33e178" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classprogress_1_1progress__display_1a69ad1829f9bc76cec1d350741b33e178" kindref="member">restart</ref>(<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/>expected_count_<sp/>)</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>Effects:<sp/>display<sp/>appropriate<sp/>scale</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>Postconditions:<sp/>count()==0,<sp/>expected_count()==expected_count_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/>_count<sp/>=<sp/>_next_tic_count<sp/>=<sp/>_tic<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/>_expected_count<sp/>=<sp/>expected_count_;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classprogress_1_1progress__display_1af4d647b3bca28ef06e058f050fca85ad" kindref="member">m_os</ref><sp/>&lt;&lt;<sp/><ref refid="classprogress_1_1progress__display_1a7edcb2af956a49221fd23af72ab11e68" kindref="member">m_s1</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;0%<sp/><sp/><sp/>10<sp/><sp/><sp/>20<sp/><sp/><sp/>30<sp/><sp/><sp/>40<sp/><sp/><sp/>50<sp/><sp/><sp/>60<sp/><sp/><sp/>70<sp/><sp/><sp/>80<sp/><sp/><sp/>90<sp/><sp/><sp/>100%\n&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/><ref refid="classprogress_1_1progress__display_1ab543eb5ce132702f32ee7742312c6348" kindref="member">m_s2</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;|----|----|----|----|----|----|----|----|----|----|&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::endl<sp/><sp/></highlight><highlight class="comment">//<sp/>endl<sp/>implies<sp/>flush,<sp/>which<sp/>ensures<sp/>display</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/><ref refid="classprogress_1_1progress__display_1a23ec7365f5ae0e412a22678e3ee40e57" kindref="member">m_s3</ref>;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>!_expected_count<sp/>)<sp/>_expected_count<sp/>=<sp/>1;<sp/><sp/></highlight><highlight class="comment">//<sp/>prevent<sp/>divide<sp/>by<sp/>zero</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/>}<sp/></highlight><highlight class="comment">//<sp/>restart</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61" refid="classprogress_1_1progress__display_1aa3f9ebb82e22846077ff5e3e88fa7e6f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><sp/><ref refid="classprogress_1_1progress__display_1aa3f9ebb82e22846077ff5e3e88fa7e6f" kindref="member">operator+=</ref>(<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/>increment<sp/>)</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>Effects:<sp/>Display<sp/>appropriate<sp/>progress<sp/>tic<sp/>if<sp/>needed.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>Postconditions:<sp/>count()==<sp/>original<sp/>count()<sp/>+<sp/>increment</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>Returns:<sp/>count().</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>(_count<sp/>+=<sp/>increment)<sp/>&gt;=<sp/>_next_tic_count<sp/>)<sp/>{<sp/><ref refid="classprogress_1_1progress__display_1a1b352d5465ddf82dc4d2b01025e33724" kindref="member">display_tic</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_count;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="classprogress_1_1progress__display_1ad92df6f2d073c297c89f8789bcd324ad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><sp/><ref refid="classprogress_1_1progress__display_1ad92df6f2d073c297c89f8789bcd324ad" kindref="member">operator++</ref>()<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classprogress_1_1progress__display_1aa3f9ebb82e22846077ff5e3e88fa7e6f" kindref="member">operator+=</ref>(<sp/>1<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="71" refid="classprogress_1_1progress__display_1ae6a11677ddfd7b26dbb70de89468e1f8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><sp/><ref refid="classprogress_1_1progress__display_1ae6a11677ddfd7b26dbb70de89468e1f8" kindref="member">count</ref>()</highlight><highlight class="keyword"><sp/>const<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_count;<sp/>}</highlight></codeline>
-<codeline lineno="72" refid="classprogress_1_1progress__display_1a82fc14223fe78d11d5b6192ffcbc3998" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><sp/><ref refid="classprogress_1_1progress__display_1a82fc14223fe78d11d5b6192ffcbc3998" kindref="member">expected_count</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_expected_count;<sp/>}</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="75" refid="classprogress_1_1progress__display_1af4d647b3bca28ef06e058f050fca85ad" refkind="member"><highlight class="normal"><sp/><sp/>std::ostream<sp/>&amp;<sp/><sp/><sp/><sp/><sp/><ref refid="classprogress_1_1progress__display_1af4d647b3bca28ef06e058f050fca85ad" kindref="member">m_os</ref>;<sp/><sp/></highlight><highlight class="comment">//<sp/>may<sp/>not<sp/>be<sp/>present<sp/>in<sp/>all<sp/>imps</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="76" refid="classprogress_1_1progress__display_1a7edcb2af956a49221fd23af72ab11e68" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><sp/><ref refid="classprogress_1_1progress__display_1a7edcb2af956a49221fd23af72ab11e68" kindref="member">m_s1</ref>;<sp/><sp/></highlight><highlight class="comment">//<sp/>string<sp/>is<sp/>more<sp/>general,<sp/>safer<sp/>than<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="classprogress_1_1progress__display_1ab543eb5ce132702f32ee7742312c6348" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><sp/><ref refid="classprogress_1_1progress__display_1ab543eb5ce132702f32ee7742312c6348" kindref="member">m_s2</ref>;<sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>const<sp/>char<sp/>*,<sp/>and<sp/>efficiency<sp/>or<sp/>size<sp/>are</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="classprogress_1_1progress__display_1a23ec7365f5ae0e412a22678e3ee40e57" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><sp/><ref refid="classprogress_1_1progress__display_1a23ec7365f5ae0e412a22678e3ee40e57" kindref="member">m_s3</ref>;<sp/><sp/></highlight><highlight class="comment">//<sp/><sp/>not<sp/>issues</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/>_count,<sp/>_expected_count,<sp/>_next_tic_count;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/>_tic;</highlight></codeline>
-<codeline lineno="82" refid="classprogress_1_1progress__display_1a1b352d5465ddf82dc4d2b01025e33724" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classprogress_1_1progress__display_1a1b352d5465ddf82dc4d2b01025e33724" kindref="member">display_tic</ref>()</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>use<sp/>of<sp/>floating<sp/>point<sp/>ensures<sp/>that<sp/>both<sp/>large<sp/>and<sp/>small<sp/>counts</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>work<sp/>correctly.<sp/><sp/>static_cast&lt;&gt;()<sp/>is<sp/>also<sp/>used<sp/>several<sp/>places</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>to<sp/>suppress<sp/>spurious<sp/>compiler<sp/>warnings.<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tics_needed<sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">((</highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(_count)</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>/<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(_expected_count))<sp/>*<sp/>50.0);</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">do</highlight><highlight class="normal"><sp/>{<sp/><ref refid="classprogress_1_1progress__display_1af4d647b3bca28ef06e058f050fca85ad" kindref="member">m_os</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="charliteral">&apos;*&apos;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::flush;<sp/>}<sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(<sp/>++_tic<sp/>&lt;<sp/>tics_needed<sp/>);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/>_next_tic_count<sp/>=<sp/></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">((_tic/50.0)<sp/>*<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(_expected_count));</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>_count<sp/>==<sp/>_expected_count<sp/>)<sp/>{</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>_tic<sp/>&lt;<sp/>51<sp/>)<sp/><ref refid="classprogress_1_1progress__display_1af4d647b3bca28ef06e058f050fca85ad" kindref="member">m_os</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="charliteral">&apos;*&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classprogress_1_1progress__display_1af4d647b3bca28ef06e058f050fca85ad" kindref="member">m_os</ref><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/>}<sp/></highlight><highlight class="comment">//<sp/>display_tic</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="97"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99"><highlight class="normal">}<sp/></highlight><highlight class="comment">//<sp/>namespace<sp/>boost</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/><sp/></highlight><highlight class="comment">//<sp/>PROGRESS_H</highlight><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/Progress.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_pseudo_accel_8_h.xml b/doxyxml/_pseudo_accel_8_h.xml
deleted file mode 100644
index 3556642..0000000
--- a/doxyxml/_pseudo_accel_8_h.xml
+++ /dev/null
@@ -1,335 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_pseudo_accel_8_h" kind="file" language="C++">
-    <compoundname>PseudoAccel.H</compoundname>
-    <includes local="no">deque</includes>
-    <includes local="no">array</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes refid="_quad_l_s_8_h" local="no">QuadLS.H</includes>
-    <includedby refid="_orient_8_h" local="no">/home/weinberg/Projects/EXP/src/Orient.H</includedby>
-    <incdepgraph>
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-        </childnode>
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-        </childnode>
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-        <link refid="_quad_l_s_8_h"/>
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-        </childnode>
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-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="3">
-        <label>array</label>
-      </node>
-      <node id="2">
-        <label>deque</label>
-      </node>
-      <node id="7">
-        <label>iomanip</label>
-      </node>
-      <node id="6">
-        <label>iostream</label>
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-        <label>tuple</label>
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-        <link refid="_component_8_h"/>
-        <childnode refid="4" relation="include">
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-        <childnode refid="22" relation="include">
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-        <label>/home/weinberg/Projects/EXP/src/ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>/home/weinberg/Projects/EXP/src/CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="16">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="17">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/ExternalCollection.H</label>
-        <link refid="_external_collection_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
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-        <childnode refid="9" relation="include">
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-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="22">
-        <label>/home/weinberg/Projects/EXP/src/ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
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-        </childnode>
-        <childnode refid="23" relation="include">
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-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="23">
-        <label>/home/weinberg/Projects/EXP/src/HaloBulge.H</label>
-        <link refid="_halo_bulge_8_h"/>
-      </node>
-      <node id="20">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/src/Orient.H</label>
-        <link refid="_orient_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="26">
-        <label>/home/weinberg/Projects/EXP/src/OutAscii.H</label>
-        <link refid="_out_ascii_8_h"/>
-        <childnode refid="26" relation="include">
-        </childnode>
-      </node>
-      <node id="27">
-        <label>/home/weinberg/Projects/EXP/src/OutCalbr.H</label>
-        <link refid="_out_calbr_8_h"/>
-      </node>
-      <node id="28">
-        <label>/home/weinberg/Projects/EXP/src/OutFrac.H</label>
-        <link refid="_out_frac_8_h"/>
-      </node>
-      <node id="29">
-        <label>/home/weinberg/Projects/EXP/src/OutVel.H</label>
-        <link refid="_out_vel_8_h"/>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/PeriodicBC.H</label>
-        <link refid="_periodic_b_c_8_h"/>
-      </node>
-      <node id="24">
-        <label>/home/weinberg/Projects/EXP/src/ScatterMFP.H</label>
-        <link refid="_scatter_m_f_p_8_h"/>
-      </node>
-      <node id="21">
-        <label>/home/weinberg/Projects/EXP/src/Shells.H</label>
-        <link refid="_shells_8_h"/>
-      </node>
-      <node id="18">
-        <label>/home/weinberg/Projects/EXP/src/TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>/home/weinberg/Projects/EXP/src/expand.H</label>
-        <link refid="expand_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>/home/weinberg/Projects/EXP/src/user/UserBar.H</label>
-        <link refid="_user_bar_8_h"/>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/src/user/UserDisk.H</label>
-        <link refid="_user_disk_8_h"/>
-      </node>
-      <node id="9">
-        <label>/home/weinberg/Projects/EXP/src/user/UserHalo.H</label>
-        <link refid="_user_halo_8_h"/>
-      </node>
-      <node id="10">
-        <label>/home/weinberg/Projects/EXP/src/user/UserLogPot.H</label>
-        <link refid="_user_log_pot_8_h"/>
-      </node>
-      <node id="11">
-        <label>/home/weinberg/Projects/EXP/src/user/UserMNdisk.H</label>
-        <link refid="_user_m_ndisk_8_h"/>
-      </node>
-      <node id="12">
-        <label>/home/weinberg/Projects/EXP/src/user/UserMW.H</label>
-        <link refid="_user_m_w_8_h"/>
-      </node>
-      <node id="13">
-        <label>/home/weinberg/Projects/EXP/src/user/UserTest.H</label>
-        <link refid="_user_test_8_h"/>
-      </node>
-      <node id="25">
-        <label>/home/weinberg/Projects/EXP/src/user/UserTestCuda.H</label>
-        <link refid="_user_test_cuda_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_pseudo_accel" prot="public">PseudoAccel</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_PseudoAccel_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_PseudoAccel_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;deque&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;array&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_quad_l_s_8_h" kindref="compound">QuadLS.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_pseudo_accel" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_pseudo_accel" kindref="compound">PseudoAccel</ref></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_pseudo_accel_1a2bf7ed60fa31de425d1cb0bd8bb258e0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pseudo_accel_1a2bf7ed60fa31de425d1cb0bd8bb258e0" kindref="member">Nsize</ref>;</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_pseudo_accel_1a558cb73adb4d7506a5aed2d6a6846083" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_pseudo_accel_1a09e5dc197db913699f4e653d371ddaa3" kindref="member">CENTER</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">,<sp/><ref refid="class_pseudo_accel_1a558cb73adb4d7506a5aed2d6a6846083" kindref="member">AXIS</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_pseudo_accel_1a2c968e5f39fd1cca180f2cf267967e97" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_pseudo_accel_1a2c968e5f39fd1cca180f2cf267967e97" kindref="member">Elem</ref><sp/>=<sp/>std::array&lt;double,<sp/>7&gt;;</highlight></codeline>
-<codeline lineno="23" refid="class_pseudo_accel_1a005a23323c3af89dfed3a66efe9def80" refkind="member"><highlight class="normal"><sp/><sp/>std::deque&lt;Elem&gt;<sp/><ref refid="class_pseudo_accel_1a005a23323c3af89dfed3a66efe9def80" kindref="member">queue</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_pseudo_accel_1afd910cc267ebd1580f41cbe5958720dd" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_pseudo_accel_1afd910cc267ebd1580f41cbe5958720dd" kindref="member">accel</ref><sp/>=<sp/>Eigen::Vector3d::Zero();</highlight></codeline>
-<codeline lineno="27" refid="class_pseudo_accel_1a4ecc396017d4241e28a61a1c14527144" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_pseudo_accel_1a4ecc396017d4241e28a61a1c14527144" kindref="member">omega</ref><sp/>=<sp/>Eigen::Vector3d::Zero();</highlight></codeline>
-<codeline lineno="28" refid="class_pseudo_accel_1afd07432015f7f62bdf952fd2160a0b0e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_pseudo_accel_1afd07432015f7f62bdf952fd2160a0b0e" kindref="member">domdt</ref><sp/>=<sp/>Eigen::Vector3d::Zero();</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_pseudo_accel_1a4769f284b0c483413ffd9b2a03a27240" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_pseudo_accel_1a4769f284b0c483413ffd9b2a03a27240" kindref="member">PseudoAccel</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_pseudo_accel_1a2bf7ed60fa31de425d1cb0bd8bb258e0" kindref="member">Nsize</ref>,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>center,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>axis)<sp/>:</highlight></codeline>
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-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pseudo_accel_1a005a23323c3af89dfed3a66efe9def80" kindref="member">queue</ref>.size()<sp/>&gt;<sp/><ref refid="class_pseudo_accel_1a2bf7ed60fa31de425d1cb0bd8bb258e0" kindref="member">Nsize</ref>)<sp/><ref refid="class_pseudo_accel_1a005a23323c3af89dfed3a66efe9def80" kindref="member">queue</ref>.pop_front();</highlight></codeline>
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-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
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-<codeline lineno="43"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pseudo_accel_1a09e5dc197db913699f4e653d371ddaa3" kindref="member">CENTER</ref><sp/>or<sp/><ref refid="class_pseudo_accel_1a558cb73adb4d7506a5aed2d6a6846083" kindref="member">AXIS</ref>)<sp/>{</highlight></codeline>
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-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/>t,<sp/>x,<sp/>y,<sp/>z,<sp/>u,<sp/>v,<sp/>w;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>&amp;e<sp/>:<sp/><ref refid="class_pseudo_accel_1a005a23323c3af89dfed3a66efe9def80" kindref="member">queue</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>t.push_back(e[0]);</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pseudo_accel_1a09e5dc197db913699f4e653d371ddaa3" kindref="member">CENTER</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>x.push_back(e[1]);</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>y.push_back(e[2]);</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>z.push_back(e[3]);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pseudo_accel_1a558cb73adb4d7506a5aed2d6a6846083" kindref="member">AXIS</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>u.push_back(e[4]);</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>v.push_back(e[5]);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>w.push_back(e[6]);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Compute<sp/>the<sp/>acceleration<sp/>only<sp/>if<sp/>there<sp/>are<sp/>enough<sp/>elements</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pseudo_accel_1a005a23323c3af89dfed3a66efe9def80" kindref="member">queue</ref>.size()==<ref refid="class_pseudo_accel_1a2bf7ed60fa31de425d1cb0bd8bb258e0" kindref="member">Nsize</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pseudo_accel_1a09e5dc197db913699f4e653d371ddaa3" kindref="member">CENTER</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_pseudo_accel_1afd910cc267ebd1580f41cbe5958720dd" kindref="member">accel</ref><sp/>&lt;&lt;<sp/></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>2.0*std::get&lt;0&gt;(<ref refid="class_quad_l_s" kindref="compound">QuadLS</ref>(t,<sp/>x).coefs()),</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>2.0*std::get&lt;0&gt;(<ref refid="class_quad_l_s" kindref="compound">QuadLS</ref>(t,<sp/>y).coefs()),</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>2.0*std::get&lt;0&gt;(<ref refid="class_quad_l_s" kindref="compound">QuadLS</ref>(t,<sp/>z).coefs());</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_pseudo_accel_1a558cb73adb4d7506a5aed2d6a6846083" kindref="member">AXIS</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>[a,<sp/>b,<sp/>c]<sp/>=<sp/><ref refid="class_quad_l_s" kindref="compound">QuadLS</ref>(t,<sp/>u).<ref refid="class_quad_l_s_1a70d3b25ce9c4cc3105182ef4c8fb303b" kindref="member">coefs</ref>();</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>[d,<sp/>e,<sp/>f]<sp/>=<sp/><ref refid="class_quad_l_s" kindref="compound">QuadLS</ref>(t,<sp/>v).<ref refid="class_quad_l_s_1a70d3b25ce9c4cc3105182ef4c8fb303b" kindref="member">coefs</ref>();</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>[g,<sp/>h,<sp/>i]<sp/>=<sp/><ref refid="class_quad_l_s" kindref="compound">QuadLS</ref>(t,<sp/>w).<ref refid="class_quad_l_s_1a70d3b25ce9c4cc3105182ef4c8fb303b" kindref="member">coefs</ref>();</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>T<sp/>=<sp/>t.back();<sp/><sp/></highlight><highlight class="comment">//<sp/>Last<sp/>eval<sp/>time</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::Vector3d<sp/>n,<sp/>dndt,<sp/>d2ndt2;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>n<sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>a*T*T+b*T+c,<sp/>d*T*T+e*T+f,<sp/>g*T*T+h*T+i;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dndt<sp/><sp/><sp/>&lt;&lt;<sp/>2.0*a*T+b,<sp/>2.0*d*T+e,<sp/>2.0*g*T+h;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>d2ndt2<sp/>&lt;&lt;<sp/>2.0*a,<sp/>2.0*d,<sp/>2.0*g;</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Get<sp/>angular<sp/>acceleration<sp/>and<sp/>its<sp/>derivative</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_pseudo_accel_1a4ecc396017d4241e28a61a1c14527144" kindref="member">omega</ref><sp/>=<sp/>n.cross(dndt);</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_pseudo_accel_1afd07432015f7f62bdf952fd2160a0b0e" kindref="member">domdt</ref><sp/>=<sp/>n.cross(d2ndt2);</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Return<sp/>center<sp/>acceleration,<sp/>angular<sp/>velocity<sp/>and<sp/>its<sp/>derivative</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{<ref refid="class_pseudo_accel_1afd910cc267ebd1580f41cbe5958720dd" kindref="member">accel</ref>,<sp/><ref refid="class_pseudo_accel_1a4ecc396017d4241e28a61a1c14527144" kindref="member">omega</ref>,<sp/><ref refid="class_pseudo_accel_1afd07432015f7f62bdf952fd2160a0b0e" kindref="member">domdt</ref>};</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="94"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_q_d_h_t_8_h.xml b/doxyxml/_q_d_h_t_8_h.xml
deleted file mode 100644
index 96a4801..0000000
--- a/doxyxml/_q_d_h_t_8_h.xml
+++ /dev/null
@@ -1,133 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_q_d_h_t_8_h" kind="file" language="C++">
-    <compoundname>QDHT.H</compoundname>
-    <includes local="no">functional</includes>
-    <includes local="no">algorithm</includes>
-    <includes local="no">chrono</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">cmath</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes refid="_e_x_pmath_8_h" local="no">EXPmath.H</includes>
-    <includedby refid="_pot_r_z_8_h" local="no">/home/weinberg/Projects/EXP/include/PotRZ.H</includedby>
-    <incdepgraph>
-      <node id="8">
-        <label>EXPmath.H</label>
-        <link refid="_e_x_pmath_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/QDHT.H</label>
-        <link refid="_q_d_h_t_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="3">
-        <label>algorithm</label>
-      </node>
-      <node id="4">
-        <label>chrono</label>
-      </node>
-      <node id="6">
-        <label>cmath</label>
-      </node>
-      <node id="2">
-        <label>functional</label>
-      </node>
-      <node id="5">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/PotRZ.H</label>
-        <link refid="_pot_r_z_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/QDHT.H</label>
-        <link refid="_q_d_h_t_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_q_d_h_t" prot="public">QDHT</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_QDHT_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_QDHT_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;functional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;algorithm&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;chrono&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_e_x_pmath_8_h" kindref="compound">EXPmath.H</ref>&gt;</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>C++17<sp/>special<sp/>function<sp/>workarounds</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_q_d_h_t" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref></highlight></codeline>
-<codeline lineno="23"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26" refid="class_q_d_h_t_1a6f81dbb61d456d837817e0053f3c2642" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a6f81dbb61d456d837817e0053f3c2642" kindref="member">nu</ref>;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_q_d_h_t_1ab07dcd2fae26d4bab6478e059f916a05" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1ab07dcd2fae26d4bab6478e059f916a05" kindref="member">N</ref>;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_q_d_h_t_1abe2b9013a76fc60975234f27a84d85be" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_q_d_h_t_1abe2b9013a76fc60975234f27a84d85be" kindref="member">zeros</ref>;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_q_d_h_t_1ad350bcdbde90afc8c1ad8cbfb30d9e40" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1ad350bcdbde90afc8c1ad8cbfb30d9e40" kindref="member">R</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_q_d_h_t_1a89c0fd5b8e935c6dfd211a552c75491f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a89c0fd5b8e935c6dfd211a552c75491f" kindref="member">S</ref>;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_q_d_h_t_1a4b2903fc891ffffa654cbf47d1a3a1b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a4b2903fc891ffffa654cbf47d1a3a1b9" kindref="member">V</ref>;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_q_d_h_t_1a4f2f28e649bd561f522665157db2de42" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_q_d_h_t_1a2bb30d6ed32fa4a76dfd913abe6a8426" kindref="member">r</ref>,<sp/><ref refid="class_q_d_h_t_1a4f2f28e649bd561f522665157db2de42" kindref="member">k</ref>;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_q_d_h_t_1a8ee835705733e89ef097c315fdaca455" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_q_d_h_t_1a8ee835705733e89ef097c315fdaca455" kindref="member">Jp</ref>;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_q_d_h_t_1a82780d3255fae4851e5af3f1431ab33c" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_q_d_h_t_1a82780d3255fae4851e5af3f1431ab33c" kindref="member">T</ref>;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="54" refid="class_q_d_h_t_1a32f95b71d2282c91ad1bd73a298d9415" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a32f95b71d2282c91ad1bd73a298d9415" kindref="member">debug</ref>;</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57" refid="class_q_d_h_t_1a2e7abe4211e480193147f33e1265ad4f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_q_d_h_t_1a2e7abe4211e480193147f33e1265ad4f" kindref="member">QDHT</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63" refid="class_q_d_h_t_1a1c39b08bbdf5d2cbaac7899178c2054a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_q_d_h_t_1a1c39b08bbdf5d2cbaac7899178c2054a" kindref="member">QDHT</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1ab07dcd2fae26d4bab6478e059f916a05" kindref="member">N</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1ad350bcdbde90afc8c1ad8cbfb30d9e40" kindref="member">R</ref>);</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_q_d_h_t_1a7932acbac720db1014040776691c58a5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_q_d_h_t_1a7932acbac720db1014040776691c58a5" kindref="member">~QDHT</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_q_d_h_t_1a6522df4c3a36e4f3f4368c889aacd7c4" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_q_d_h_t_1a6522df4c3a36e4f3f4368c889aacd7c4" kindref="member">operator()</ref>(Eigen::VectorXd&amp;<sp/>v,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>forward=</highlight><highlight class="keyword">true</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_q_d_h_t_1a1d7d6dc619bcf5b232db6a06052786ea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a1d7d6dc619bcf5b232db6a06052786ea" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a2bb30d6ed32fa4a76dfd913abe6a8426" kindref="member">r</ref>,<sp/>Eigen::VectorXd&amp;<sp/>v);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" kindref="member">getR</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a2bb30d6ed32fa4a76dfd913abe6a8426" kindref="member">r</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="class_q_d_h_t_1a544bb6c7f92c9b89b14e77893a384a3b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_q_d_h_t_1a544bb6c7f92c9b89b14e77893a384a3b" kindref="member">getK</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a4f2f28e649bd561f522665157db2de42" kindref="member">k</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81" refid="class_q_d_h_t_1a36c39f3231a2b6576a8b22ea93c12bf5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_d_h_t_1a36c39f3231a2b6576a8b22ea93c12bf5" kindref="member">check</ref>();</highlight></codeline>
-<codeline lineno="82"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight><highlight class="comment">//<sp/>END:<sp/>_QDHT_H</highlight><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/QDHT.H"/>
-  </compounddef>
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diff --git a/doxyxml/_q_p_dist_f_8_h.xml b/doxyxml/_q_p_dist_f_8_h.xml
deleted file mode 100644
index b6caefc..0000000
--- a/doxyxml/_q_p_dist_f_8_h.xml
+++ /dev/null
@@ -1,586 +0,0 @@
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-    <includes refid="orbit_8_h" local="no">orbit.H</includes>
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-        <link refid="massmodel_8_h"/>
-        <childnode refid="6" relation="include">
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-        <childnode refid="7" relation="include">
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-        <childnode refid="1" relation="include">
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-        <label>Eigen/Eigen</label>
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-        <label>cstdlib</label>
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-        <label>deque</label>
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-        <label>iomanip</label>
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-        <label>iostream</label>
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-        <label>map</label>
-      </node>
-      <node id="7">
-        <label>memory</label>
-      </node>
-      <node id="8">
-        <label>random</label>
-      </node>
-      <node id="17">
-        <label>sstream</label>
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-      <node id="3">
-        <label>string</label>
-      </node>
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-        <label>vector</label>
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-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/include/BiorthCyl.H</label>
-        <link refid="_biorth_cyl_8_h"/>
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-        </childnode>
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-        </childnode>
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-        </childnode>
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-<codeline lineno="27" refid="class_q_p_dist_f_1a38b67139ded694040382b02d9362ca15" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a3430be609339f750b1a5078b5453838e" kindref="member">RMMAX</ref>,<sp/><ref refid="class_q_p_dist_f_1a38b67139ded694040382b02d9362ca15" kindref="member">REMAX</ref>;</highlight></codeline>
-<codeline lineno="28" refid="class_q_p_dist_f_1a01103b92e4612c73257fc855be276581" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a01103b92e4612c73257fc855be276581" kindref="member">EGRID</ref>,<sp/><ref refid="class_q_p_dist_f_1acf6c0b2f7857393b32a995fc58eda459" kindref="member">KGRID</ref>,<sp/><ref refid="class_q_p_dist_f_1a6591c0660de91642d37424f852290c9f" kindref="member">MGRID</ref>;</highlight></codeline>
-<codeline lineno="29" refid="class_q_p_dist_f_1a951168f0c1d54aeb5e15d634fb0283e8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a951168f0c1d54aeb5e15d634fb0283e8" kindref="member">SIGMA</ref>;</highlight></codeline>
-<codeline lineno="30" refid="class_q_p_dist_f_1a80c2d5ace00108a3e1a0a2b6728d58d6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a25b90d16f1e825b23c8970121bb0148a" kindref="member">LAMBDA</ref>,<sp/><ref refid="class_q_p_dist_f_1a80c2d5ace00108a3e1a0a2b6728d58d6" kindref="member">ALPHA</ref>,<sp/><ref refid="class_q_p_dist_f_1ad87ad3a8c271b5b896fa375f057c79b2" kindref="member">BETA</ref>,<sp/><ref refid="class_q_p_dist_f_1aa00c85495f92235244d26dfca4941f8e" kindref="member">GAMA</ref>;</highlight></codeline>
-<codeline lineno="31" refid="class_q_p_dist_f_1a80399247494d83eba55829e54b47286c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1ac125f06a3f1e76acc73007bb3fbb7560" kindref="member">ROFF</ref>,<sp/><ref refid="class_q_p_dist_f_1a80399247494d83eba55829e54b47286c" kindref="member">EOFF</ref>,<sp/><ref refid="class_q_p_dist_f_1ab20c965e39b733ba215327cb9cace601" kindref="member">KOFF</ref>;</highlight></codeline>
-<codeline lineno="32" refid="class_q_p_dist_f_1a34789fc355cc0faafdc3bbdcb7d46082" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a340e6889e25fc0e92e97de4c85124170" kindref="member">KMIN</ref>,<sp/><ref refid="class_q_p_dist_f_1a34789fc355cc0faafdc3bbdcb7d46082" kindref="member">KMAX</ref>;</highlight></codeline>
-<codeline lineno="33" refid="class_q_p_dist_f_1a506e45097b61935552cc46f19204d0e6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a506e45097b61935552cc46f19204d0e6" kindref="member">NINT</ref>,<sp/><ref refid="class_q_p_dist_f_1a0b98e198db86633bf3ef17772a550bc6" kindref="member">NUMT</ref>;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Class<sp/>variables</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_q_p_dist_f_1a90fa8f37902e0b6d64849bd8888c0961" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a90fa8f37902e0b6d64849bd8888c0961" kindref="member">df_computed</ref>;</highlight></codeline>
-<codeline lineno="37" refid="class_q_p_dist_f_1a41c3b3ad76b5ecb7b36034f6eebec593" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_q_p_dist_f_1a41c3b3ad76b5ecb7b36034f6eebec593" kindref="member">sigma_E</ref>,<sp/><ref refid="class_q_p_dist_f_1a3754f3cc52ffb3abf88bd549e33d9ecf" kindref="member">sigma_K</ref>;<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Kernel<sp/>parameters</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_q_p_dist_f_1aa24a54ef3e72a024fae765df99289a6f" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_q_p_dist_f_1aa24a54ef3e72a024fae765df99289a6f" kindref="member">Egrid</ref>,<sp/><ref refid="class_q_p_dist_f_1a2011dd263ddf4e2781b0a42d74470339" kindref="member">Kgrid</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Kernel<sp/>eval.<sp/>points</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_q_p_dist_f_1a07a10a5a5e127f62d2a644ce4e6e8c4e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_q_p_dist_f_1a07a10a5a5e127f62d2a644ce4e6e8c4e" kindref="member">X</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Solution<sp/>vector</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_q_p_dist_f_1a19c124794a171c2c2431b5a20e8377e4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a19c124794a171c2c2431b5a20e8377e4" kindref="member">obj0</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Objective<sp/>function<sp/>sans<sp/>anisotropy</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/>constraint</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_q_p_dist_f_1a7e9fa5658d839fe84ed9335a236d39bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a7e9fa5658d839fe84ed9335a236d39bc" kindref="member">obj</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Total<sp/>objective<sp/>function</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_q_p_dist_f_1ad0519a78caef72228eeff75c971c3887" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1ad0519a78caef72228eeff75c971c3887" kindref="member">IFAIL</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>return<sp/>flag<sp/>from<sp/>QLD</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_q_p_dist_f_1afb18afee78178fd538930197af8b759c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1afb18afee78178fd538930197af8b759c" kindref="member">verbose</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Print<sp/>out<sp/>solution<sp/>if<sp/>set;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_q_p_dist_f_1a1a3bb897ad166fc95a1ac59af7d44d23" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a1a3bb897ad166fc95a1ac59af7d44d23" kindref="member">NJMAX</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Eigen::VectorXd<sp/>grid<sp/>for<sp/>JMax</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_q_p_dist_f_1abe5b57bebf6cbb71da61fe6f62bf01f5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a766ebff4b83435abc0708c1c53a6dd8a" kindref="member">Emin</ref>,<sp/><ref refid="class_q_p_dist_f_1abe5b57bebf6cbb71da61fe6f62bf01f5" kindref="member">Emax</ref>,<sp/><ref refid="class_q_p_dist_f_1a7b343eb0196774bece044e8476a6ecd4" kindref="member">TOLE</ref>;</highlight></codeline>
-<codeline lineno="49" refid="class_q_p_dist_f_1a91b362f9026f4707aa5eba7020b13b04" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_q_p_dist_f_1a2554dac09e827b50fb39137ad9276555" kindref="member">JMAXE</ref>,<sp/><ref refid="class_q_p_dist_f_1a91b362f9026f4707aa5eba7020b13b04" kindref="member">JMAX</ref>,<sp/><ref refid="class_q_p_dist_f_1a6444f622d07155f3e45afee965777574" kindref="member">JMAX2</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Cumulative<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_q_p_dist_f_1a5c9a2e58c92d6854e4f5f84df9aec6c8" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_q_p_dist_f_1a24c8dc96961fed26ae5489c6155c5cf5" kindref="member">pdf</ref>,<sp/><ref refid="class_q_p_dist_f_1a5c9a2e58c92d6854e4f5f84df9aec6c8" kindref="member">cdf</ref>;</highlight></codeline>
-<codeline lineno="52" refid="class_q_p_dist_f_1ac8fab37363218fb73a0be1f738043be4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1ac8fab37363218fb73a0be1f738043be4" kindref="member">NUME</ref>,<sp/><ref refid="class_q_p_dist_f_1a0048b56c84ae20a0ed1fe1bf8804a3ea" kindref="member">NUMK</ref>;</highlight></codeline>
-<codeline lineno="53" refid="class_q_p_dist_f_1a83c7daecb6dc7a9fe012d5aae73ec78e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a83c7daecb6dc7a9fe012d5aae73ec78e" kindref="member">TOLK</ref>;</highlight></codeline>
-<codeline lineno="54" refid="class_q_p_dist_f_1a50c57465cbf36e6b8cc5e10acd6c537d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>pair&lt;int,<sp/>int&gt;<sp/><ref refid="class_q_p_dist_f_1a50c57465cbf36e6b8cc5e10acd6c537d" kindref="member">ip</ref>;</highlight></codeline>
-<codeline lineno="55" refid="class_q_p_dist_f_1ac49abc68464949a247e941cc9c37bc3f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>pair&lt;double,<sp/>ip&gt;<sp/><ref refid="class_q_p_dist_f_1ac49abc68464949a247e941cc9c37bc3f" kindref="member">elem</ref>;</highlight></codeline>
-<codeline lineno="56" refid="class_q_p_dist_f_1a5dcf691d7db3a0e95259bc9535025399" refkind="member"><highlight class="normal"><sp/><sp/>multimap&lt;double,<sp/>ip&gt;<sp/><ref refid="class_q_p_dist_f_1a5dcf691d7db3a0e95259bc9535025399" kindref="member">realz</ref>;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Class<sp/>utility<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_q_p_dist_f_1affabb192a169b63f40dc9443a00ad3ca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1affabb192a169b63f40dc9443a00ad3ca" kindref="member">kernel</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y0,<sp/></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sy);</highlight></codeline>
-<codeline lineno="61" refid="class_q_p_dist_f_1a4b7a717887570b9be7c12f6003e4b0f7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a4b7a717887570b9be7c12f6003e4b0f7" kindref="member">kernel_x</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y0,<sp/></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sy);</highlight></codeline>
-<codeline lineno="63" refid="class_q_p_dist_f_1af53a49e23e3511fe91830b90f9af7680" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1af53a49e23e3511fe91830b90f9af7680" kindref="member">kernel_y</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y0,<sp/></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sy);</highlight></codeline>
-<codeline lineno="65" refid="class_q_p_dist_f_1a04c2f667e388c5efd1a12ef6de2f43b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a04c2f667e388c5efd1a12ef6de2f43b3" kindref="member">kernel_x2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y0,<sp/></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sy);</highlight></codeline>
-<codeline lineno="67" refid="class_q_p_dist_f_1ad45c30814417ef86a5239b90f7b4daa1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1ad45c30814417ef86a5239b90f7b4daa1" kindref="member">kernel_y2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y0,<sp/></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sy);</highlight></codeline>
-<codeline lineno="69" refid="class_q_p_dist_f_1a9be14915f81742c025442985b25e25eb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a9be14915f81742c025442985b25e25eb" kindref="member">kernel_xy</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y0,<sp/></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sy);</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Error<sp/>function</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_q_p_dist_f_1a278131d6d1a05630dfecfe225bf7b04d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a278131d6d1a05630dfecfe225bf7b04d" kindref="member">bomb</ref>(</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*s)<sp/>{</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/>cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;QPDistF:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>s<sp/>&lt;&lt;<sp/>endl;</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/>exit(-1);</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_q_p_dist_f_1a2337fc510e6530f56caaf9cd66154f21" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a2337fc510e6530f56caaf9cd66154f21" kindref="member">MassEGrid</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Choose<sp/>basis<sp/>by<sp/>Phi(R(M))<sp/><sp/><sp/>(Default:<sp/>true)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_q_p_dist_f_1a8012dfe2b142061245fe8a03c353ef5c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a8012dfe2b142061245fe8a03c353ef5c" kindref="member">MassLinear</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Choose<sp/>linear<sp/>range<sp/>in<sp/>mass<sp/>(Default:<sp/>true)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_q_p_dist_f_1a210de2de7b88efa860d261270ff5a3a0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a210de2de7b88efa860d261270ff5a3a0" kindref="member">ITERMAX</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>1000</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85" refid="class_q_p_dist_f_1a991f3f082a58b13a0a526e953fe34ce3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a991f3f082a58b13a0a526e953fe34ce3" kindref="member">ITERTOL</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>1.0e-6</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_q_p_dist_f_1aa8c6ab9119f52a226e302d4ee9920abd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1aa8c6ab9119f52a226e302d4ee9920abd" kindref="member">FSIGE</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Energy<sp/>kernal<sp/>variance<sp/>prefactor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>1.0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_q_p_dist_f_1ab128440aba5791d69b091d869ed3861c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1ab128440aba5791d69b091d869ed3861c" kindref="member">FSIGK</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>J/Jmax<sp/>kernal<sp/>variance<sp/>prefactor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Default:<sp/>2.0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113" refid="class_q_p_dist_f_1a1a2178d2041ffa2457391e53cc06430b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_q_p_dist_f_1a1a2178d2041ffa2457391e53cc06430b" kindref="member">QPDistF</ref>(<ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref><sp/>T,<sp/><ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref><sp/>H,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>remax,<sp/></highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>egrid,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kgrid,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mgrid,</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sigma=2.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>lambda=0.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>alpha=-4.0,<sp/></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>beta=1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>gama=1.0,</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>roff=0.01,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>eoff=0.5,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>koff=0.5,<sp/></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>kmin=0.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>kmax=1.0,</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nint=80,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numt=40);</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121" refid="class_q_p_dist_f_1a95d6ef2eb61c02c784123d668a37932e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_q_p_dist_f_1a95d6ef2eb61c02c784123d668a37932e" kindref="member">QPDistF</ref>(<ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref><sp/>T,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>remax,<sp/></highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>egrid,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kgrid,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mgrid,</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sigma=2.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>lambda=0.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>alpha=-4.0,<sp/></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>beta=1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>gama=1.0,</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>roff=0.01,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>eoff=0.5,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>koff=0.5,<sp/></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>kmin=0.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>kmax=1.0,</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nint=80,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numt=40);</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129" refid="class_q_p_dist_f_1ab9cdbc2d37ff59ce7c3852e5ac127294" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_q_p_dist_f_1ab9cdbc2d37ff59ce7c3852e5ac127294" kindref="member">QPDistF</ref>(<ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref><sp/>T,<sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"></highlight></codeline>
-<codeline lineno="131" refid="class_q_p_dist_f_1ac3974fceddb8325b83c9b7a26673fc52" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_q_p_dist_f_1ac3974fceddb8325b83c9b7a26673fc52" kindref="member">~QPDistF</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133" refid="class_q_p_dist_f_1a73d433dada19c9faee0356efeba4be55" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a73d433dada19c9faee0356efeba4be55" kindref="member">compute_distribution</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135" refid="class_q_p_dist_f_1a7c268181e4460b56d60a3c5ae5ac0fdf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a7c268181e4460b56d60a3c5ae5ac0fdf" kindref="member">set_verbose</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="136" refid="class_q_p_dist_f_1a80f4a588433865345edb22f2a7a76091" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a80f4a588433865345edb22f2a7a76091" kindref="member">set_verbose</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>verbosity);</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"></highlight></codeline>
-<codeline lineno="138" refid="class_q_p_dist_f_1a951c88210cd4ade1d529947d813bef09" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a951c88210cd4ade1d529947d813bef09" kindref="member">distf</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="139" refid="class_q_p_dist_f_1a1027f0fff612221166bb0684b1fe6502" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a1027f0fff612221166bb0684b1fe6502" kindref="member">dfdE</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="140" refid="class_q_p_dist_f_1ad58b5c3e556e2d998e77d322ddb740ce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1ad58b5c3e556e2d998e77d322ddb740ce" kindref="member">dfdL</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="141" refid="class_q_p_dist_f_1a5b8a7f391167c96ac7ce63a9786f1639" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a5b8a7f391167c96ac7ce63a9786f1639" kindref="member">d2fdE2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="143" refid="class_q_p_dist_f_1a2d95065d1adc7001fca1a7451387fd58" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a2d95065d1adc7001fca1a7451387fd58" kindref="member">distf_EK</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>K);</highlight></codeline>
-<codeline lineno="144" refid="class_q_p_dist_f_1aac472e0677a5435e0104be4bc5da419a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1aac472e0677a5435e0104be4bc5da419a" kindref="member">dfdE_EK</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>K);</highlight></codeline>
-<codeline lineno="145" refid="class_q_p_dist_f_1af3cc04db2440ac8c525c4b988ef9173a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1af3cc04db2440ac8c525c4b988ef9173a" kindref="member">dfdK_EK</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>K);</highlight></codeline>
-<codeline lineno="146" refid="class_q_p_dist_f_1a5ff046d3944a81acf3437032dc45ad64" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a5ff046d3944a81acf3437032dc45ad64" kindref="member">d2fdE2_EK</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>K);</highlight></codeline>
-<codeline lineno="147" refid="class_q_p_dist_f_1a5c80c51c35afb393ed2f2b0e31d81d62" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a5c80c51c35afb393ed2f2b0e31d81d62" kindref="member">d2fdK2_EK</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>K);</highlight></codeline>
-<codeline lineno="148" refid="class_q_p_dist_f_1a830d2bc6efb213731c769a7d46690c66" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a830d2bc6efb213731c769a7d46690c66" kindref="member">d2fdEK_EK</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>K);</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight></codeline>
-<codeline lineno="150" refid="class_q_p_dist_f_1a5ace8189d5b513215a648b58486205a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a5ace8189d5b513215a648b58486205a7" kindref="member">get_objective</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>OBJ0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>OBJ,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">*<sp/>IFLG)</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/>{*OBJ0=<ref refid="class_q_p_dist_f_1a19c124794a171c2c2431b5a20e8377e4" kindref="member">obj0</ref>;<sp/>*OBJ=<ref refid="class_q_p_dist_f_1a7e9fa5658d839fe84ed9335a236d39bc" kindref="member">obj</ref>;<sp/>*IFLG=<ref refid="class_q_p_dist_f_1ad0519a78caef72228eeff75c971c3887" kindref="member">IFAIL</ref>;}</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Cumulative<sp/>grid</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="154" refid="class_q_p_dist_f_1ae89639bb99f9ce98c6980a0725a56c09" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1ae89639bb99f9ce98c6980a0725a56c09" kindref="member">make_cdf</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ENUM,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>KNUM,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>KTOL=1.0e-3);</highlight></codeline>
-<codeline lineno="155" refid="class_q_p_dist_f_1a74737d1f2bb67ddead6a0b56aca57e66" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a74737d1f2bb67ddead6a0b56aca57e66" kindref="member">dump_cdf</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="156" refid="class_q_p_dist_f_1a74d7adad8f76f4624e759a4679166ca0" refkind="member"><highlight class="normal"><sp/><sp/>pair&lt;double,<sp/>double&gt;<sp/><ref refid="class_q_p_dist_f_1a74d7adad8f76f4624e759a4679166ca0" kindref="member">gen_EK</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r1,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r2);</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Read<sp/>in<sp/>already<sp/>computed<sp/>distribution<sp/>function</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_q_p_dist_f_1afb933c7d7523dde799113a5d80f15d56" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1afb933c7d7523dde799113a5d80f15d56" kindref="member">read_state</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Write<sp/>out<sp/>distribution<sp/>function<sp/>for<sp/>future<sp/>use</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_q_p_dist_f_1a59eaf9ed4a39c44a1bfd933ba979f12a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_q_p_dist_f_1a59eaf9ed4a39c44a1bfd933ba979f12a" kindref="member">write_state</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="164"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>QPDistF.H</highlight><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/QPDistF.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_quad_l_s_8_h.xml b/doxyxml/_quad_l_s_8_h.xml
deleted file mode 100644
index b08d4c3..0000000
--- a/doxyxml/_quad_l_s_8_h.xml
+++ /dev/null
@@ -1,298 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_quad_l_s_8_h" kind="file" language="C++">
-    <compoundname>QuadLS.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">tuple</includes>
-    <includedby refid="_pseudo_accel_8_h" local="no">/home/weinberg/Projects/EXP/include/PseudoAccel.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>iomanip</label>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="4">
-        <label>tuple</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/src/Component.H</label>
-        <link refid="_component_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="16">
-        <label>/home/weinberg/Projects/EXP/src/CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="17">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="18">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/ExternalCollection.H</label>
-        <link refid="_external_collection_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="23">
-        <label>/home/weinberg/Projects/EXP/src/ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-      </node>
-      <node id="24">
-        <label>/home/weinberg/Projects/EXP/src/HaloBulge.H</label>
-        <link refid="_halo_bulge_8_h"/>
-      </node>
-      <node id="21">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/src/Orient.H</label>
-        <link refid="_orient_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="27">
-        <label>/home/weinberg/Projects/EXP/src/OutAscii.H</label>
-        <link refid="_out_ascii_8_h"/>
-        <childnode refid="27" relation="include">
-        </childnode>
-      </node>
-      <node id="28">
-        <label>/home/weinberg/Projects/EXP/src/OutCalbr.H</label>
-        <link refid="_out_calbr_8_h"/>
-      </node>
-      <node id="29">
-        <label>/home/weinberg/Projects/EXP/src/OutFrac.H</label>
-        <link refid="_out_frac_8_h"/>
-      </node>
-      <node id="30">
-        <label>/home/weinberg/Projects/EXP/src/OutVel.H</label>
-        <link refid="_out_vel_8_h"/>
-      </node>
-      <node id="7">
-        <label>/home/weinberg/Projects/EXP/src/PeriodicBC.H</label>
-        <link refid="_periodic_b_c_8_h"/>
-      </node>
-      <node id="25">
-        <label>/home/weinberg/Projects/EXP/src/ScatterMFP.H</label>
-        <link refid="_scatter_m_f_p_8_h"/>
-      </node>
-      <node id="22">
-        <label>/home/weinberg/Projects/EXP/src/Shells.H</label>
-        <link refid="_shells_8_h"/>
-      </node>
-      <node id="19">
-        <label>/home/weinberg/Projects/EXP/src/TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>/home/weinberg/Projects/EXP/src/expand.H</label>
-        <link refid="expand_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/src/user/UserBar.H</label>
-        <link refid="_user_bar_8_h"/>
-      </node>
-      <node id="9">
-        <label>/home/weinberg/Projects/EXP/src/user/UserDisk.H</label>
-        <link refid="_user_disk_8_h"/>
-      </node>
-      <node id="10">
-        <label>/home/weinberg/Projects/EXP/src/user/UserHalo.H</label>
-        <link refid="_user_halo_8_h"/>
-      </node>
-      <node id="11">
-        <label>/home/weinberg/Projects/EXP/src/user/UserLogPot.H</label>
-        <link refid="_user_log_pot_8_h"/>
-      </node>
-      <node id="12">
-        <label>/home/weinberg/Projects/EXP/src/user/UserMNdisk.H</label>
-        <link refid="_user_m_ndisk_8_h"/>
-      </node>
-      <node id="13">
-        <label>/home/weinberg/Projects/EXP/src/user/UserMW.H</label>
-        <link refid="_user_m_w_8_h"/>
-      </node>
-      <node id="14">
-        <label>/home/weinberg/Projects/EXP/src/user/UserTest.H</label>
-        <link refid="_user_test_8_h"/>
-      </node>
-      <node id="26">
-        <label>/home/weinberg/Projects/EXP/src/user/UserTestCuda.H</label>
-        <link refid="_user_test_cuda_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_quad_l_s" prot="public">QuadLS</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_QUADLS_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_QUADLS_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;tuple&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Take<sp/>a<sp/>pair<sp/>of<sp/>data<sp/>arrays<sp/>(x,<sp/>y)<sp/>and<sp/>perform<sp/>a<sp/>quadratic<sp/>regression</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="10" refid="class_quad_l_s" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_quad_l_s" kindref="compound">QuadLS</ref></highlight></codeline>
-<codeline lineno="11"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>_a,<sp/>_b,<sp/>_c;</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_quad_l_s_1ae32cf3f6bb08588f6c9f87aa7cda073c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_quad_l_s_1ae32cf3f6bb08588f6c9f87aa7cda073c" kindref="member">fit</ref>(<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T<sp/>&amp;x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T<sp/>&amp;y<sp/>)</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>n<sp/>=<sp/>x.size();</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n==y.size()<sp/>and<sp/>n&gt;0)<sp/>{</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sumx=0,<sp/>sumy=0,<sp/>sumxy=0,<sp/>sumx2y=0,<sp/>sumx2=0,<sp/>sumx3=0,<sp/>sumx4=0;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;n;<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sumx<sp/><sp/><sp/>+=<sp/>x[i];</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sumy<sp/><sp/><sp/>+=<sp/>y[i];</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sumx2<sp/><sp/>+=<sp/>x[i]*x[i];</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sumxy<sp/><sp/>+=<sp/>x[i]*y[i];</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sumx2y<sp/>+=<sp/>x[i]*x[i]*y[i];</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sumx3<sp/><sp/>+=<sp/>x[i]*x[i]*x[i];</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sumx4<sp/><sp/>+=<sp/>x[i]*x[i]*x[i]*x[i];</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Sxx<sp/><sp/><sp/>=<sp/>sumx2<sp/><sp/>-<sp/>sumx*sumx/n;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Sxy<sp/><sp/><sp/>=<sp/>sumxy<sp/><sp/>-<sp/>sumx*sumy/n;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Sxx2<sp/><sp/>=<sp/>sumx3<sp/><sp/>-<sp/>sumx*sumx2/n;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Sx2y<sp/><sp/>=<sp/>sumx2y<sp/>-<sp/>sumx2*sumy/n;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Sx2x2<sp/>=<sp/>sumx4<sp/><sp/>-<sp/>sumx2*sumx2/n;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>denom<sp/>=<sp/>Sxx*Sx2x2<sp/>-<sp/>Sxx2*Sxx2;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fabs(denom)&gt;0.0)<sp/>{</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_a<sp/>=<sp/>(Sx2y*Sxx<sp/><sp/>-<sp/>Sxy*Sxx2<sp/>)<sp/>/<sp/>denom;</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_b<sp/>=<sp/>(Sxy*Sx2x2<sp/>-<sp/>Sx2y*Sxx2)<sp/>/<sp/>denom;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_c<sp/>=<sp/>(sumy<sp/>-<sp/>sumx2*_a<sp/>-<sp/>sumx*_b)<sp/>/<sp/>n;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>_a<sp/>=<sp/>_b<sp/>=<sp/>_c<sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_a<sp/>=<sp/>_b<sp/>=<sp/>_c<sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_quad_l_s_1a49807fc0f13383e2460af429d5ae6091" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_quad_l_s_1a49807fc0f13383e2460af429d5ae6091" kindref="member">QuadLS</ref>()<sp/>{<sp/>}</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_quad_l_s_1a159770a829d10a64d363262cef3176b5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_quad_l_s_1a159770a829d10a64d363262cef3176b5" kindref="member">QuadLS</ref>(<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T<sp/>&amp;x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T<sp/>&amp;y<sp/>)</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_quad_l_s_1ae32cf3f6bb08588f6c9f87aa7cda073c" kindref="member">fit</ref>(x,<sp/>y);<sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="63" refid="class_quad_l_s_1a3fbcda213f37d5e746e9096d3e28cac2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_quad_l_s_1a3fbcda213f37d5e746e9096d3e28cac2" kindref="member">~QuadLS</ref>()<sp/>{<sp/>}</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_quad_l_s_1a70d3b25ce9c4cc3105182ef4c8fb303b" refkind="member"><highlight class="normal"><sp/><sp/>std::tuple&lt;double,<sp/>double,<sp/>double&gt;<sp/><ref refid="class_quad_l_s_1a70d3b25ce9c4cc3105182ef4c8fb303b" kindref="member">coefs</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="67"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::make_tuple(<sp/>_a,<sp/>_b,<sp/>_c<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_quad_l_s_1a68b18fc2d798d77a00cc1867b6e65e4b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_quad_l_s_1a68b18fc2d798d77a00cc1867b6e65e4b" kindref="member">operator()</ref>(<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x<sp/>)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="71"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_a<sp/>*<sp/>x<sp/>*<sp/>x<sp/>+<sp/>_b<sp/>*<sp/>x<sp/>+<sp/>_c;<sp/>}</highlight></codeline>
-<codeline lineno="72"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/QuadLS.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_r_k4_8_h.xml b/doxyxml/_r_k4_8_h.xml
deleted file mode 100644
index 9ef3b5f..0000000
--- a/doxyxml/_r_k4_8_h.xml
+++ /dev/null
@@ -1,66 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_r_k4_8_h" kind="file" language="C++">
-    <compoundname>RK4.H</compoundname>
-    <includes local="no">Eigen/Eigen</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/RK4.H</label>
-        <link refid="_r_k4_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Eigen/Eigen</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_o_d_e_1_1_r_k4" prot="public">ODE::RK4</innerclass>
-    <innernamespace refid="namespace_o_d_e">ODE</innernamespace>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_RK4_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_RK4_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6" refid="namespace_o_d_e" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespace_o_d_e" kindref="compound">ODE</ref></highlight></codeline>
-<codeline lineno="7"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="9" refid="class_o_d_e_1_1_r_k4" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_o_d_e_1_1_r_k4" kindref="compound">RK4</ref></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" kindref="member">Vref</ref><sp/>=<sp/>Eigen::Ref&lt;Eigen::VectorXd&gt;;</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_o_d_e_1_1_r_k4_1a4c1831b513c79dae9f41a864fe8969bc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_o_d_e_1_1_r_k4_1a4c1831b513c79dae9f41a864fe8969bc" kindref="member">Force</ref><sp/>=<sp/>std::function&lt;<ref refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" kindref="member">Vref</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/><ref refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" kindref="member">Vref</ref>)&gt;;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_o_d_e_1_1_r_k4_1a4c1831b513c79dae9f41a864fe8969bc" kindref="member">Force</ref><sp/><ref refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" kindref="member">force</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_o_d_e_1_1_r_k4_1a6e06cf1b52091e460786791cf415e944" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_o_d_e_1_1_r_k4_1a6e06cf1b52091e460786791cf415e944" kindref="member">RK4</ref>(<ref refid="class_o_d_e_1_1_r_k4_1a4c1831b513c79dae9f41a864fe8969bc" kindref="member">Force</ref><sp/><ref refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" kindref="member">force</ref>)<sp/>:<sp/><ref refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" kindref="member">force</ref>(<ref refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" kindref="member">force</ref>)<sp/>{}</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_o_d_e_1_1_r_k4_1afa6cdfcab3f9a6d0f2dc5dc135b4098e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_o_d_e_1_1_r_k4_1afa6cdfcab3f9a6d0f2dc5dc135b4098e" kindref="member">step</ref>(<ref refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" kindref="member">Vref</ref><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dt)</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>f0<sp/>=<sp/><ref refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" kindref="member">force</ref>(t,<sp/>x),<sp/>xt;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>f1<sp/>=<sp/><ref refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" kindref="member">force</ref>(t<sp/>+<sp/>0.5*dt,<sp/>(xt=x<sp/>+<sp/>0.5*dt*f0));</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>f2<sp/>=<sp/><ref refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" kindref="member">force</ref>(t<sp/>+<sp/>0.5*dt,<sp/>(xt=x<sp/>+<sp/>0.5*dt*f1));</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd<sp/>f3<sp/>=<sp/><ref refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" kindref="member">force</ref>(t<sp/>+<sp/>dt,<sp/>(xt=x<sp/>+<sp/>dt*f2));</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>x<sp/>+=<sp/>dt<sp/>*<sp/>(<sp/>f0<sp/>+<sp/>2.0*f1<sp/>+<sp/>2.0*f2<sp/>+<sp/>f3<sp/>)<sp/>/<sp/>6.0;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>t<sp/>+<sp/>dt;</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="43"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>_RK4_H_</highlight><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/RK4.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_running_time_8_h.xml b/doxyxml/_running_time_8_h.xml
deleted file mode 100644
index c59042c..0000000
--- a/doxyxml/_running_time_8_h.xml
+++ /dev/null
@@ -1,128 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_running_time_8_h" kind="file" language="C++">
-    <compoundname>RunningTime.H</compoundname>
-    <includes local="no">deque</includes>
-    <includes refid="_timer_8_h" local="no">Timer.H</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/RunningTime.H</label>
-        <link refid="_running_time_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>chrono</label>
-      </node>
-      <node id="5">
-        <label>cstdlib</label>
-      </node>
-      <node id="2">
-        <label>deque</label>
-      </node>
-      <node id="4">
-        <label>iostream</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_running_time" prot="public">RunningTime</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_RUNNINGTIME_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_RUNNINGTIME_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;deque&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_timer_8_h" kindref="compound">Timer.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">/*</highlight></codeline>
-<codeline lineno="8"><highlight class="comment"><sp/><sp/>A<sp/>stopwatch<sp/>that<sp/>averages<sp/>over<sp/>the<sp/>last<sp/>N<sp/>trials</highlight></codeline>
-<codeline lineno="9"><highlight class="comment">*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="class_running_time" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_running_time" kindref="compound">RunningTime</ref></highlight></codeline>
-<codeline lineno="11"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>The<sp/>time<sp/>trial<sp/>history<sp/>array</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" refkind="member"><highlight class="normal"><sp/><sp/>std::deque&lt;double&gt;<sp/><ref refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" kindref="member">boxcar</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>The<sp/>current<sp/>average,<sp/>the<sp/>last<sp/>time,<sp/>the<sp/>time<sp/>scale<sp/>prefactor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="class_running_time_1a7b0471613579810bf32524816adb905f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_running_time_1adca343f0d332bcd88ffd56b950ed0917" kindref="member">current</ref>,<sp/><ref refid="class_running_time_1a1c5af29d924a06dc2d2e5903d60a0bb5" kindref="member">value</ref>,<sp/><ref refid="class_running_time_1a21693cc51fd4ac190f8f017c77fba525" kindref="member">last</ref>,<sp/><ref refid="class_running_time_1a7b0471613579810bf32524816adb905f" kindref="member">accum</ref>;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Previous<sp/>number<sp/>of<sp/>states<sp/>to<sp/>keep<sp/>for<sp/>average</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_running_time_1a93ef2110fe6f477d74b02a6c55f63ac2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_running_time_1a93ef2110fe6f477d74b02a6c55f63ac2" kindref="member">nkeep</ref>;</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_running_time_1a352c38b45a087db968d1c801f54475bb" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_timer" kindref="compound">Timer</ref><sp/><ref refid="class_running_time_1a352c38b45a087db968d1c801f54475bb" kindref="member">timer</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Add<sp/>the<sp/>current<sp/>value<sp/>to<sp/>the<sp/>history</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="class_running_time_1ad926a130c429caa4173c98b3da248bf4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_running_time_1ad926a130c429caa4173c98b3da248bf4" kindref="member">append</ref>()</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1a21693cc51fd4ac190f8f017c77fba525" kindref="member">last</ref><sp/><sp/><sp/>=<sp/><ref refid="class_running_time_1a352c38b45a087db968d1c801f54475bb" kindref="member">timer</ref>.<ref refid="class_timer_1a490604efc23a4ff9bef8d1f9f418ecb2" kindref="member">getTime</ref>();</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1a7b0471613579810bf32524816adb905f" kindref="member">accum</ref><sp/>+=<sp/><ref refid="class_running_time_1a21693cc51fd4ac190f8f017c77fba525" kindref="member">last</ref>;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1a1c5af29d924a06dc2d2e5903d60a0bb5" kindref="member">value</ref><sp/><sp/>=<sp/><ref refid="class_running_time_1a7b0471613579810bf32524816adb905f" kindref="member">accum</ref>;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1a7b0471613579810bf32524816adb905f" kindref="member">accum</ref><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" kindref="member">boxcar</ref>.push_back(<ref refid="class_running_time_1a1c5af29d924a06dc2d2e5903d60a0bb5" kindref="member">value</ref>);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" kindref="member">boxcar</ref>.size()<sp/>&gt;<sp/><ref refid="class_running_time_1a93ef2110fe6f477d74b02a6c55f63ac2" kindref="member">nkeep</ref>)<sp/><ref refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" kindref="member">boxcar</ref>.pop_front();</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Compute<sp/>the<sp/>average</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1adca343f0d332bcd88ffd56b950ed0917" kindref="member">current</ref><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(deque&lt;double&gt;::iterator<sp/>it=<ref refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" kindref="member">boxcar</ref>.begin();<sp/>it!=<ref refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" kindref="member">boxcar</ref>.end();<sp/>it++)</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_running_time_1adca343f0d332bcd88ffd56b950ed0917" kindref="member">current</ref><sp/>+=<sp/>*it;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1adca343f0d332bcd88ffd56b950ed0917" kindref="member">current</ref><sp/>/=<sp/><ref refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" kindref="member">boxcar</ref>.size();</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Add<sp/>to<sp/>accumulated<sp/>time</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_running_time_1aed2021e81dfd9464cb34471edca03ef8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_running_time_1aed2021e81dfd9464cb34471edca03ef8" kindref="member">lap</ref>()</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1a21693cc51fd4ac190f8f017c77fba525" kindref="member">last</ref><sp/><sp/><sp/>=<sp/><ref refid="class_running_time_1a352c38b45a087db968d1c801f54475bb" kindref="member">timer</ref>.<ref refid="class_timer_1a490604efc23a4ff9bef8d1f9f418ecb2" kindref="member">getTime</ref>();</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_running_time_1a7b0471613579810bf32524816adb905f" kindref="member">accum</ref><sp/>+=<sp/><ref refid="class_running_time_1a21693cc51fd4ac190f8f017c77fba525" kindref="member">last</ref>;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Initialize<sp/>the<sp/>stop<sp/>watch</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_running_time_1a8fbbe6f82f71ce2a927bab08dfbc10d5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_running_time_1a8fbbe6f82f71ce2a927bab08dfbc10d5" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>n)<sp/></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
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-<codeline lineno="80"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
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-  </compounddef>
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diff --git a/doxyxml/_s_l_grid_m_p2_8_h.xml b/doxyxml/_s_l_grid_m_p2_8_h.xml
deleted file mode 100644
index c426b40..0000000
--- a/doxyxml/_s_l_grid_m_p2_8_h.xml
+++ /dev/null
@@ -1,723 +0,0 @@
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-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;mpi.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="localmpi_8_h" kindref="compound">localmpi.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="sltable_m_p2_8_h" kindref="compound">sltableMP2.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;yaml-cpp/yaml.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="libvars_8_h" kindref="compound">libvars.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">__EXP__;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaUtil.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaMappingConstants.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_s_l_grid_sph" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref></highlight></codeline>
-<codeline lineno="29"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="33" refid="class_s_l_grid_sph_1a98f33cee4a3a93be7209e4b26f16b0d3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a98f33cee4a3a93be7209e4b26f16b0d3" kindref="member">lmax</ref>,<sp/><ref refid="class_s_l_grid_sph_1a821c02701e9a8e31b47af2d3eccf27b8" kindref="member">nmax</ref>,<sp/><ref refid="class_s_l_grid_sph_1a360e31f364063db2236bb554a7b49939" kindref="member">numr</ref>;</highlight></codeline>
-<codeline lineno="34" refid="class_s_l_grid_sph_1a04985be5f03154610e1936eb535a0ec4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1aae736cf4583b1f351dccf33cfb2760c8" kindref="member">rmin</ref>,<sp/><ref refid="class_s_l_grid_sph_1a04985be5f03154610e1936eb535a0ec4" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_s_l_grid_sph_1a3648c40afe4fa6c3771327496f7e7378" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a3648c40afe4fa6c3771327496f7e7378" kindref="member">cmap</ref>,<sp/><ref refid="class_s_l_grid_sph_1acd74b97ab84a983a9a32b9fc87aea8e7" kindref="member">diverge</ref>;</highlight></codeline>
-<codeline lineno="37" refid="class_s_l_grid_sph_1a187de697240f6e2ebf0c5fe89eda6deb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a139f50426e685e271c7fac4dc2e6165a" kindref="member">rmap</ref>,<sp/><ref refid="class_s_l_grid_sph_1a187de697240f6e2ebf0c5fe89eda6deb" kindref="member">dfac</ref>;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_s_l_grid_sph_1a9d95ca862e68606aa3ae5dbc11a15511" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a3011eca1c0c798506f69ae81d5d74e22" kindref="member">xmin</ref>,<sp/><ref refid="class_s_l_grid_sph_1a3ea5affe28f119b873476f7546f6e21f" kindref="member">xmax</ref>,<sp/><ref refid="class_s_l_grid_sph_1a9d95ca862e68606aa3ae5dbc11a15511" kindref="member">dxi</ref>;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_s_l_grid_sph_1ae84ca6d8e6621023939681b7dad5e769" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_s_l_grid_sph_1ae84ca6d8e6621023939681b7dad5e769" kindref="member">r</ref>;</highlight></codeline>
-<codeline lineno="42" refid="class_s_l_grid_sph_1a13cdd52f3df7160a06e49fbb92c90d33" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_s_l_grid_sph_1a13cdd52f3df7160a06e49fbb92c90d33" kindref="member">xi</ref>;</highlight></codeline>
-<codeline lineno="43" refid="class_s_l_grid_sph_1a2ac57c8cff2acf0552982fd814489b96" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_s_l_grid_sph_1a2ac57c8cff2acf0552982fd814489b96" kindref="member">p0</ref>;</highlight></codeline>
-<codeline lineno="44" refid="class_s_l_grid_sph_1a6b1dfc6e83f3f9181275a91013b6d2c2" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_s_l_grid_sph_1a6b1dfc6e83f3f9181275a91013b6d2c2" kindref="member">d0</ref>;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>shared<sp/>pointers<sp/>to<sp/>avoid<sp/>copying<sp/>and<sp/>memory<sp/>leaks</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_s_l_grid_sph_1a2cd7f22c9725b46cc111468c8cc0e54b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_s_l_grid_sph_1a2cd7f22c9725b46cc111468c8cc0e54b" kindref="member">table_ptr_1D</ref><sp/>=<sp/>std::shared_ptr&lt;TableSph[]&gt;;</highlight></codeline>
-<codeline lineno="48" refid="class_s_l_grid_sph_1af9ef477ea505753f1186beb8985c92fc" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_sph_1a2cd7f22c9725b46cc111468c8cc0e54b" kindref="member">table_ptr_1D</ref><sp/><ref refid="class_s_l_grid_sph_1af9ef477ea505753f1186beb8985c92fc" kindref="member">table</ref>;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_s_l_grid_sph_1ae86ad2c7a2f0aaca24c340654fe7905f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ae86ad2c7a2f0aaca24c340654fe7905f" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>LMAX,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NMAX,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NUMR,</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMIN,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX,<sp/></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>CACHE,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>CMAP,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAP);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_s_l_grid_sph_1a53064ba83592997af7ef9db2b4c3a168" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a53064ba83592997af7ef9db2b4c3a168" kindref="member">init_table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="55" refid="class_s_l_grid_sph_1adc69631b7180c1696cfa4889a866ffcb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1adc69631b7180c1696cfa4889a866ffcb" kindref="member">compute_table</ref>(<ref refid="class_table_sph" kindref="compound">TableSph</ref>*<sp/><ref refid="class_s_l_grid_sph_1af9ef477ea505753f1186beb8985c92fc" kindref="member">table</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="56" refid="class_s_l_grid_sph_1ad1a0965f57c08b748f27ac6edf9963ff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ad1a0965f57c08b748f27ac6edf9963ff" kindref="member">compute_table_worker</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Local<sp/>MPI<sp/>stuff</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_s_l_grid_sph_1a5ccb33849b3ad7c1b3b9e0f3b543749e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a5ccb33849b3ad7c1b3b9e0f3b543749e" kindref="member">mpi_setup</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="61" refid="class_s_l_grid_sph_1a44b73c659f6150712bedd4c65bd73ad9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a44b73c659f6150712bedd4c65bd73ad9" kindref="member">mpi_unpack_table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="62" refid="class_s_l_grid_sph_1a77fa9c94eee0db659571fb651d648cfd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_sph_1a77fa9c94eee0db659571fb651d648cfd" kindref="member">mpi_pack_table</ref>(<ref refid="class_table_sph" kindref="compound">TableSph</ref>*<sp/><ref refid="class_s_l_grid_sph_1af9ef477ea505753f1186beb8985c92fc" kindref="member">table</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l);</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_s_l_grid_sph_1a91105146d8a0da9dd88ca1ef3cbfbba4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a91105146d8a0da9dd88ca1ef3cbfbba4" kindref="member">mpi_myid</ref>,<sp/><ref refid="class_s_l_grid_sph_1a2ce45d787ce5d7d38b45b758ff1d2ac8" kindref="member">mpi_numprocs</ref>;</highlight></codeline>
-<codeline lineno="65" refid="class_s_l_grid_sph_1a1d02e85ec936ec5bfb3a53aee3fbbf8e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a1d02e85ec936ec5bfb3a53aee3fbbf8e" kindref="member">mpi_bufsz</ref>;</highlight></codeline>
-<codeline lineno="66" refid="class_s_l_grid_sph_1a02f9febe228b8ab460b308aa8c5f3b33" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;char<sp/>[]&gt;<sp/><ref refid="class_s_l_grid_sph_1a02f9febe228b8ab460b308aa8c5f3b33" kindref="member">mpi_buf</ref>;</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68" refid="class_s_l_grid_sph_1ae31a5a0d0286e82a2897962f2be9f05f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ae31a5a0d0286e82a2897962f2be9f05f" kindref="member">bomb</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>oops);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_s_l_grid_sph_1ad8ae914daf3e01a12f79a8c0e65d71df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ad8ae914daf3e01a12f79a8c0e65d71df" kindref="member">cache</ref>;</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_s_l_grid_sph_1a348a4860961f860e95289c1003fa09f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a348a4860961f860e95289c1003fa09f2" kindref="member">tbdbg</ref>;</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="class_s_l_grid_sph_1a54572f3f82e4145cadb176a4da4dc1cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_s_l_grid_sph_1a54572f3f82e4145cadb176a4da4dc1cd" kindref="member">default_model</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;SLGridSph.model&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_s_l_grid_sph_1ae699f8de2cd4982887712cc8797b2f56" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_s_l_grid_sph_1ae699f8de2cd4982887712cc8797b2f56" kindref="member">default_cache</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;.slgrid_sph_cache&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_s_l_grid_sph_1a7936821e8dd19b7806d574a74ce3fdcc" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_s_l_grid_sph_1a7936821e8dd19b7806d574a74ce3fdcc" kindref="member">model_file_name</ref>;</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_s_l_grid_sph_1a9989c0fc0f39b8834319582435aacb5a" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_s_l_grid_sph_1a9989c0fc0f39b8834319582435aacb5a" kindref="member">sph_cache_name</ref>;</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_s_l_grid_sph_1aac80af79ab59895fb9e889270408da3a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1aac80af79ab59895fb9e889270408da3a" kindref="member">WriteH5Cache</ref>();</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_s_l_grid_sph_1a8129e8ca1aecf9408f58d4f612524f4b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a8129e8ca1aecf9408f58d4f612524f4b" kindref="member">ReadH5Cache</ref>();</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_s_l_grid_sph_1ae482fb3249a70db4b09bb599fd8e2d14" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="class_s_l_grid_sph_1ae482fb3249a70db4b09bb599fd8e2d14" kindref="member">Version</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;1.0&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_s_l_grid_sph_1a88680088d03b1513cd6b41d7fde37fed" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a88680088d03b1513cd6b41d7fde37fed" kindref="member">mpi</ref>;</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Constructors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_s_l_grid_sph_1a79f8158e72bc4b09de2ab9d52274eb2e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_sph_1a79f8158e72bc4b09de2ab9d52274eb2e" kindref="member">SLGridSph</ref>(std::shared_ptr&lt;SphericalModelTable&gt;<sp/>mod,</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a98f33cee4a3a93be7209e4b26f16b0d3" kindref="member">lmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a821c02701e9a8e31b47af2d3eccf27b8" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a360e31f364063db2236bb554a7b49939" kindref="member">numr</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1aae736cf4583b1f351dccf33cfb2760c8" kindref="member">rmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a04985be5f03154610e1936eb535a0ec4" kindref="member">rmax</ref>,</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ad8ae914daf3e01a12f79a8c0e65d71df" kindref="member">cache</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Cmap,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAP,</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>cachename=</highlight><highlight class="stringliteral">&quot;.slgrid_sph_cache&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>Verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="class_s_l_grid_sph_1acd989ab899fd4a3cae0842a7b645506e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_sph_1acd989ab899fd4a3cae0842a7b645506e" kindref="member">SLGridSph</ref>(std::string<sp/>modelname,</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a98f33cee4a3a93be7209e4b26f16b0d3" kindref="member">lmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a821c02701e9a8e31b47af2d3eccf27b8" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a360e31f364063db2236bb554a7b49939" kindref="member">numr</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1aae736cf4583b1f351dccf33cfb2760c8" kindref="member">rmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a04985be5f03154610e1936eb535a0ec4" kindref="member">rmax</ref>,</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ad8ae914daf3e01a12f79a8c0e65d71df" kindref="member">cache</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Cmap,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAP,<sp/></highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DFAC,</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>cachename=</highlight><highlight class="stringliteral">&quot;.slgrid_sph_cache&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>Verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120" refid="class_s_l_grid_sph_1a8b4dd986c690720af87899c958a01f74" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_sph_1a8b4dd986c690720af87899c958a01f74" kindref="member">SLGridSph</ref>(std::string<sp/>cachename);</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124" refid="class_s_l_grid_sph_1a0447ca0bd5ccf6f1af8f34198a312ca1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a0447ca0bd5ccf6f1af8f34198a312ca1" kindref="member">~SLGridSph</ref>();</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127" refid="class_s_l_grid_sph_1a29d45462f080477ea497df50d5a25f9f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>YAML::Node<sp/><ref refid="class_s_l_grid_sph_1a29d45462f080477ea497df50d5a25f9f" kindref="member">getHeader</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>cachefile);</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Members</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="130"><highlight class="normal"></highlight></codeline>
-<codeline lineno="132" refid="class_s_l_grid_sph_1a9aebc866a79fdb771d76c0c843649b32" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a9aebc866a79fdb771d76c0c843649b32" kindref="member">eigenvalue</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1af9ef477ea505753f1186beb8985c92fc" kindref="member">table</ref>[l].ev[n];}</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135" refid="class_s_l_grid_sph_1abd551a1660dd7f05b08729c2f177c9a5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1abd551a1660dd7f05b08729c2f177c9a5" kindref="member">r_to_xi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ae84ca6d8e6621023939681b7dad5e769" kindref="member">r</ref>);</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"></highlight></codeline>
-<codeline lineno="138" refid="class_s_l_grid_sph_1a6faeba3e71cfc3f8995fbebdedce438f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a6faeba3e71cfc3f8995fbebdedce438f" kindref="member">xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="class_s_l_grid_sph_1a3453326410450ada459541e2fa27653a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a3453326410450ada459541e2fa27653a" kindref="member">d_xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="145" refid="class_s_l_grid_sph_1a9aae31bb1274acf5d3f75f4e55b9bc47" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a9aae31bb1274acf5d3f75f4e55b9bc47" kindref="member">get_pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148" refid="class_s_l_grid_sph_1ae78ffa77c2d3a979c6b495e86bcaea08" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ae78ffa77c2d3a979c6b495e86bcaea08" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151" refid="class_s_l_grid_sph_1a7f52a541599980c1b6b1510c031ba94f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a7f52a541599980c1b6b1510c031ba94f" kindref="member">get_force</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156" refid="class_s_l_grid_sph_1a3c349d263e7fc0a82e11fcdebd5bf727" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a3c349d263e7fc0a82e11fcdebd5bf727" kindref="member">get_pot</ref>(Eigen::VectorXd&amp;<sp/>vec,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::map&lt;std::string,<sp/>std::string&gt;</highlight></codeline>
-<codeline lineno="164" refid="class_s_l_grid_sph_1a0a2d442ec88e96e720b03d2d74626232" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_sph_1a0a2d442ec88e96e720b03d2d74626232" kindref="member">cacheInfo</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>cachefile,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">true</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168" refid="class_s_l_grid_sph_1a6ee9d9a7235b0729623c24a3a36a3ec3" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_s_l_grid_sph_1a6ee9d9a7235b0729623c24a3a36a3ec3" kindref="member">orthoCheck</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>knots=40);</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"></highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>(std::vector&lt;cudaArray_t&gt;&amp;<sp/>cuArray,</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thrust::host_vector&lt;cudaTextureObject_t&gt;&amp;<sp/>tex);</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/>cudaMappingConstants<sp/>ret;</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"></highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.rscale<sp/>=<sp/><ref refid="class_s_l_grid_sph_1a139f50426e685e271c7fac4dc2e6165a" kindref="member">rmap</ref>;</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.hscale<sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmin<sp/><sp/><sp/>=<sp/><ref refid="class_s_l_grid_sph_1a3011eca1c0c798506f69ae81d5d74e22" kindref="member">xmin</ref>;</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmax<sp/><sp/><sp/>=<sp/><ref refid="class_s_l_grid_sph_1a3ea5affe28f119b873476f7546f6e21f" kindref="member">xmax</ref>;</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymin<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymax<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numr<sp/><sp/><sp/>=<sp/><ref refid="class_s_l_grid_sph_1a360e31f364063db2236bb554a7b49939" kindref="member">numr</ref>;</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numx<sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numy<sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dxi<sp/><sp/><sp/><sp/>=<sp/><ref refid="class_s_l_grid_sph_1a9d95ca862e68606aa3ae5dbc11a15511" kindref="member">dxi</ref>;</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dyi<sp/><sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.cmapR<sp/><sp/>=<sp/><ref refid="class_s_l_grid_sph_1a3648c40afe4fa6c3771327496f7e7378" kindref="member">cmap</ref>;</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196" refid="class_s_l_grid_sph_1ac0a42f88f11bcf873f22f872713d4403" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1ac0a42f88f11bcf873f22f872713d4403" kindref="member">get_dens</ref>(Eigen::VectorXd&amp;<sp/>vec,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="200" refid="class_s_l_grid_sph_1a8b7e66262789b194108d9201658a0d18" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a8b7e66262789b194108d9201658a0d18" kindref="member">get_force</ref>(Eigen::VectorXd&amp;<sp/>vec,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205" refid="class_s_l_grid_sph_1aa7c51d6c6cb365ccec7a593c3fda299b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1aa7c51d6c6cb365ccec7a593c3fda299b" kindref="member">get_pot</ref>(Eigen::MatrixXd&amp;<sp/>tab,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="210" refid="class_s_l_grid_sph_1afbf0043312e5c39d6ce2f634662e65d6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1afbf0043312e5c39d6ce2f634662e65d6" kindref="member">get_dens</ref>(Eigen::MatrixXd&amp;<sp/>tab,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"></highlight></codeline>
-<codeline lineno="215" refid="class_s_l_grid_sph_1a80b386ffdf810dab68fde482b5d69672" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a80b386ffdf810dab68fde482b5d69672" kindref="member">get_force</ref>(Eigen::MatrixXd&amp;<sp/>tab,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"></highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight></codeline>
-<codeline lineno="219" refid="class_s_l_grid_sph_1a8e6d4ecf525a519593b74105fb6e6e09" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a8e6d4ecf525a519593b74105fb6e6e09" kindref="member">getRmin</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1aae736cf4583b1f351dccf33cfb2760c8" kindref="member">rmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="220" refid="class_s_l_grid_sph_1afe90870e2518f304449f805815c86432" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1afe90870e2518f304449f805815c86432" kindref="member">getRmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a04985be5f03154610e1936eb535a0ec4" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="222"></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight></codeline>
-<codeline lineno="225" refid="class_s_l_grid_sph_1a76d7cc921a09b190519bf76cad5b1798" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a76d7cc921a09b190519bf76cad5b1798" kindref="member">getLmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a98f33cee4a3a93be7209e4b26f16b0d3" kindref="member">lmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="226" refid="class_s_l_grid_sph_1a510786e220835eb653d7c2c6a531feb5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a510786e220835eb653d7c2c6a531feb5" kindref="member">getNmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_sph_1a821c02701e9a8e31b47af2d3eccf27b8" kindref="member">nmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="228"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"></highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="232" refid="class_slab_model" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_slab_model" kindref="compound">SlabModel</ref></highlight></codeline>
-<codeline lineno="233"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="236" refid="class_slab_model_1af46aec018ca87986e34255969501b979" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_slab_model_1af46aec018ca87986e34255969501b979" kindref="member">id</ref>;</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight></codeline>
-<codeline lineno="238"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241" refid="class_slab_model_1a67a16e8d5d31282974d0c3a9071c0054" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;SlabModel&gt;<sp/><ref refid="class_slab_model_1a67a16e8d5d31282974d0c3a9071c0054" kindref="member">createModel</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>type);</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244" refid="class_slab_model_1a674b8108920991da09a93432c15c6fbf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_slab_model_1a674b8108920991da09a93432c15c6fbf" kindref="member">pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247" refid="class_slab_model_1a25670aa6c64fdaf1e5b1d818398837e6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_slab_model_1a25670aa6c64fdaf1e5b1d818398837e6" kindref="member">dpot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight></codeline>
-<codeline lineno="250" refid="class_slab_model_1acf84752a8838c0b2f1c02e2b395e45c3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_slab_model_1acf84752a8838c0b2f1c02e2b395e45c3" kindref="member">dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"></highlight></codeline>
-<codeline lineno="253" refid="class_slab_model_1a5da645e2820ccc913eb6c0de81a6ad13" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_slab_model_1a5da645e2820ccc913eb6c0de81a6ad13" kindref="member">ID</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_slab_model_1af46aec018ca87986e34255969501b979" kindref="member">id</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="254"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"></highlight></codeline>
-<codeline lineno="257" refid="class_s_l_grid_slab" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_s_l_grid_slab" kindref="compound">SLGridSlab</ref></highlight></codeline>
-<codeline lineno="258"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"></highlight></codeline>
-<codeline lineno="260"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="262" refid="class_s_l_grid_slab_1a4c4c811937afcbb1336983ef5938436c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a52a55eaff1bec7489b8e94d1adf836d7" kindref="member">numk</ref>,<sp/><ref refid="class_s_l_grid_slab_1a4c4c811937afcbb1336983ef5938436c" kindref="member">nmax</ref>,<sp/><ref refid="class_s_l_grid_slab_1ad821ab70b7b032167ae0f57f3a40c5ba" kindref="member">numz</ref>;</highlight></codeline>
-<codeline lineno="263" refid="class_s_l_grid_slab_1a1620ef679ef02a7dc88bea3b85eab1cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a1620ef679ef02a7dc88bea3b85eab1cd" kindref="member">zmax</ref>;</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="265" refid="class_s_l_grid_slab_1a721d878a968cdb9098765ebd0c407c50" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1aa8bd43c9df4464f8f32e658a39098905" kindref="member">xmin</ref>,<sp/><ref refid="class_s_l_grid_slab_1af409c189501a0ad14774fda616b57714" kindref="member">xmax</ref>,<sp/><ref refid="class_s_l_grid_slab_1a721d878a968cdb9098765ebd0c407c50" kindref="member">dxi</ref>;</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="267" refid="class_s_l_grid_slab_1aaab093f2aeacce9ef49efb3920b280d0" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_s_l_grid_slab_1aaab093f2aeacce9ef49efb3920b280d0" kindref="member">z</ref>;</highlight></codeline>
-<codeline lineno="268" refid="class_s_l_grid_slab_1ab759f5dcb4ee1b351e305bdf3bf1a273" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_s_l_grid_slab_1ab759f5dcb4ee1b351e305bdf3bf1a273" kindref="member">xi</ref>;</highlight></codeline>
-<codeline lineno="269" refid="class_s_l_grid_slab_1a36315e1052acde53d50dd86afed37be8" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_s_l_grid_slab_1a36315e1052acde53d50dd86afed37be8" kindref="member">p0</ref>;</highlight></codeline>
-<codeline lineno="270" refid="class_s_l_grid_slab_1a7051a8f5d3b33a606b0f89545a1515bd" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_s_l_grid_slab_1a7051a8f5d3b33a606b0f89545a1515bd" kindref="member">d0</ref>;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"></highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>shared<sp/>pointers<sp/>to<sp/>avoid<sp/>copying<sp/>and<sp/>memory<sp/>leaks</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="273" refid="class_s_l_grid_slab_1ab2215c5afe2ff65f595055bfba83fdd4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_s_l_grid_slab_1ab2215c5afe2ff65f595055bfba83fdd4" kindref="member">table_ptr_1D</ref><sp/>=<sp/>std::shared_ptr&lt;TableSlab[]&gt;;</highlight></codeline>
-<codeline lineno="274" refid="class_s_l_grid_slab_1af9fe85c0b6379ecc7e8d29027d9abf44" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_s_l_grid_slab_1af9fe85c0b6379ecc7e8d29027d9abf44" kindref="member">table_ptr_2D</ref><sp/>=<sp/>std::shared_ptr&lt;table_ptr_1D[]&gt;;</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"></highlight></codeline>
-<codeline lineno="276" refid="class_s_l_grid_slab_1ae6f3704552e774905f09675c3a64dadf" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_slab_1af9fe85c0b6379ecc7e8d29027d9abf44" kindref="member">table_ptr_2D</ref><sp/><ref refid="class_s_l_grid_slab_1ae6f3704552e774905f09675c3a64dadf" kindref="member">table</ref>;</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"></highlight></codeline>
-<codeline lineno="278" refid="class_s_l_grid_slab_1ac9425e2e2bb0983f3fc805796fc504ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1ac9425e2e2bb0983f3fc805796fc504ac" kindref="member">init_table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="279" refid="class_s_l_grid_slab_1a2cb71c392879d0b0b2d516c9afb01e30" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a2cb71c392879d0b0b2d516c9afb01e30" kindref="member">compute_table</ref>(<ref refid="class_table_slab" kindref="compound">TableSlab</ref>*<sp/><ref refid="class_s_l_grid_slab_1ae6f3704552e774905f09675c3a64dadf" kindref="member">table</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kx,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ky);</highlight></codeline>
-<codeline lineno="280" refid="class_s_l_grid_slab_1a754db729d4e23e1e95990f2393d8f783" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a754db729d4e23e1e95990f2393d8f783" kindref="member">compute_table_worker</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"></highlight></codeline>
-<codeline lineno="282"><highlight class="normal"></highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Local<sp/>MPI<sp/>stuff</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="284" refid="class_s_l_grid_slab_1a9d8a16280b58587b4d349cea7d8d4704" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a9d8a16280b58587b4d349cea7d8d4704" kindref="member">mpi_setup</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="285" refid="class_s_l_grid_slab_1aa7c05313c2d64d507f0a9b9db1d3be63" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1aa7c05313c2d64d507f0a9b9db1d3be63" kindref="member">mpi_unpack_table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="286" refid="class_s_l_grid_slab_1afca0e5d7104fa100fb846563cd571455" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_slab_1afca0e5d7104fa100fb846563cd571455" kindref="member">mpi_pack_table</ref>(<ref refid="class_table_slab" kindref="compound">TableSlab</ref>*<sp/><ref refid="class_s_l_grid_slab_1ae6f3704552e774905f09675c3a64dadf" kindref="member">table</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kx,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ky);</highlight></codeline>
-<codeline lineno="287" refid="class_s_l_grid_slab_1af20736a0f97918a5ea229c6452fca9ad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1af20736a0f97918a5ea229c6452fca9ad" kindref="member">ReadH5Cache</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="288" refid="class_s_l_grid_slab_1a482af5c4664d3300b373d1bfdf7017a0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a482af5c4664d3300b373d1bfdf7017a0" kindref="member">WriteH5Cache</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"></highlight></codeline>
-<codeline lineno="290" refid="class_s_l_grid_slab_1a3139827f842bca00ac61015370863654" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a3139827f842bca00ac61015370863654" kindref="member">mpi_myid</ref>,<sp/><ref refid="class_s_l_grid_slab_1ab534b8922203c5bcea6357217520868c" kindref="member">mpi_numprocs</ref>;</highlight></codeline>
-<codeline lineno="291" refid="class_s_l_grid_slab_1a3ef3dca87ffb4bbb96e254fa6155a86f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a3ef3dca87ffb4bbb96e254fa6155a86f" kindref="member">mpi_bufsz</ref>;</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"></highlight></codeline>
-<codeline lineno="293" refid="class_s_l_grid_slab_1a052f43f3e37dfcf1442d63057f09580a" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;char[]&gt;<sp/><ref refid="class_s_l_grid_slab_1a052f43f3e37dfcf1442d63057f09580a" kindref="member">mpi_buf</ref>;</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"></highlight></codeline>
-<codeline lineno="295" refid="class_s_l_grid_slab_1a22aad815f3b29b50d18e6c8933c26d2a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a22aad815f3b29b50d18e6c8933c26d2a" kindref="member">bomb</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>oops);</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"></highlight></codeline>
-<codeline lineno="298" refid="class_s_l_grid_slab_1a767ebf4ed389cb3c6a23be4308c2cc58" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a767ebf4ed389cb3c6a23be4308c2cc58" kindref="member">tbdbg</ref>;</highlight></codeline>
-<codeline lineno="299"><highlight class="normal"></highlight></codeline>
-<codeline lineno="301"></codeline>
-<codeline lineno="304" refid="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3" kindref="member">CoordMapTypes</ref><sp/>{<ref refid="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3a28b2a86d2fa2bb19260d6522d5cf45c1" kindref="member">Tanh</ref>,<sp/><ref refid="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3a436d25903feb1fffdcd24470cbc321f8" kindref="member">Sech</ref>,<sp/><ref refid="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3a888e6a6ba5a4141f687e45b5d4cebf09" kindref="member">Linear</ref>};</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"></highlight></codeline>
-<codeline lineno="307" refid="class_s_l_grid_slab_1_1_coord_map" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_s_l_grid_slab_1_1_coord_map" kindref="compound">CoordMap</ref></highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="311" refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" kindref="member">H</ref>;</highlight></codeline>
-<codeline lineno="312"><highlight class="normal"></highlight></codeline>
-<codeline lineno="313"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="315" refid="class_s_l_grid_slab_1_1_coord_map_1aa5bf84ec8451a510fe23993ef4f4d3cc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_s_l_grid_slab_1_1_coord_map_1aa5bf84ec8451a510fe23993ef4f4d3cc" kindref="member">CoordMap</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" kindref="member">H</ref>)<sp/>:<sp/><ref refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" kindref="member">H</ref>(<ref refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" kindref="member">H</ref>)<sp/>{}</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="318" refid="class_s_l_grid_slab_1_1_coord_map_1a1721fdceac0350451110fe6083a01d20" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1_1_coord_map_1a1721fdceac0350451110fe6083a01d20" kindref="member">~CoordMap</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="364"><highlight class="normal"></highlight></codeline>
-<codeline lineno="366" refid="class_s_l_grid_slab_1a9ad081359ff735116418533721db9a80" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_s_l_grid_slab_1a9ad081359ff735116418533721db9a80" kindref="member">type</ref>;</highlight></codeline>
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-<codeline lineno="369" refid="class_s_l_grid_slab_1a7f120b3cf92257406299e566fee0e917" refkind="member"><highlight class="normal"><sp/><sp/>std::unique_ptr&lt;CoordMap&gt;<sp/><ref refid="class_s_l_grid_slab_1a7f120b3cf92257406299e566fee0e917" kindref="member">mM</ref>;</highlight></codeline>
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-<codeline lineno="371"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="375"><highlight class="normal"></highlight></codeline>
-<codeline lineno="377" refid="class_s_l_grid_slab_1aa6f37f2c77794781b8d850421f47c4f7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1aa6f37f2c77794781b8d850421f47c4f7" kindref="member">cache</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
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-<codeline lineno="386" refid="class_s_l_grid_slab_1a0427cb1ee4437eaa78b1761a95c6c2df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a0427cb1ee4437eaa78b1761a95c6c2df" kindref="member">ZBEG</ref>;</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"></highlight></codeline>
-<codeline lineno="389" refid="class_s_l_grid_slab_1a3ff861d4cbb4fa66ccf8b3f30424becc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a3ff861d4cbb4fa66ccf8b3f30424becc" kindref="member">ZEND</ref>;</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"></highlight></codeline>
-<codeline lineno="391"><highlight class="normal"></highlight></codeline>
-<codeline lineno="393" refid="class_s_l_grid_slab_1a99c51a8549a6a1b203d5b8f179cf221c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_slab_1a99c51a8549a6a1b203d5b8f179cf221c" kindref="member">SLGridSlab</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a4c4c811937afcbb1336983ef5938436c" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1ad821ab70b7b032167ae0f57f3a40c5ba" kindref="member">numz</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a1620ef679ef02a7dc88bea3b85eab1cd" kindref="member">zmax</ref>,</highlight></codeline>
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-<codeline lineno="395"><highlight class="normal"></highlight></codeline>
-<codeline lineno="397" refid="class_s_l_grid_slab_1a436f9bfe2aaaf95e689cd68898399601" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_s_l_grid_slab_1a436f9bfe2aaaf95e689cd68898399601" kindref="member">~SLGridSlab</ref>();</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight></codeline>
-<codeline lineno="399"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="401"><highlight class="normal"></highlight></codeline>
-<codeline lineno="402"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="411"><highlight class="normal"></highlight></codeline>
-<codeline lineno="413" refid="class_s_l_grid_slab_1ac9ca51c7f210c88ca3d50fe7a815864e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1ac9ca51c7f210c88ca3d50fe7a815864e" kindref="member">d_xi_to_z</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a7f120b3cf92257406299e566fee0e917" kindref="member">mM</ref>-&gt;d_xi_to_z(x);<sp/>}</highlight></codeline>
-<codeline lineno="414"><highlight class="normal"></highlight></codeline>
-<codeline lineno="416" refid="class_s_l_grid_slab_1a92d655d4c68ea145815a3aa9a3b13768" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a92d655d4c68ea145815a3aa9a3b13768" kindref="member">get_pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kx,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ky,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="417"><highlight class="normal"></highlight></codeline>
-<codeline lineno="419" refid="class_s_l_grid_slab_1a3c5e1b64ac43a09745c9a37a1bc65745" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a3c5e1b64ac43a09745c9a37a1bc65745" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kx,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ky,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="420"><highlight class="normal"></highlight></codeline>
-<codeline lineno="422" refid="class_s_l_grid_slab_1aef28a5e5a126e4d39c40063ed75b8f4c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1aef28a5e5a126e4d39c40063ed75b8f4c" kindref="member">get_force</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kx,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ky,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="423"><highlight class="normal"></highlight></codeline>
-<codeline lineno="427" refid="class_s_l_grid_slab_1a6f44042c8f9373175855d448fa68c902" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a6f44042c8f9373175855d448fa68c902" kindref="member">get_pot</ref>(Eigen::VectorXd&amp;<sp/>vec,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kx,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ky,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="431" refid="class_s_l_grid_slab_1a8dda8abe537999c8bff271e7afb255ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a8dda8abe537999c8bff271e7afb255ae" kindref="member">get_dens</ref>(Eigen::VectorXd&amp;<sp/>vec,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kx,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ky,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="435" refid="class_s_l_grid_slab_1ab71e9c5b9a755a0b5f03ce92f0678a81" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1ab71e9c5b9a755a0b5f03ce92f0678a81" kindref="member">get_force</ref>(Eigen::VectorXd&amp;<sp/>vec,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kx,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ky,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="436"><highlight class="normal"></highlight></codeline>
-<codeline lineno="441" refid="class_s_l_grid_slab_1a62e203e934e311f078a30ed31e4cbd02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a62e203e934e311f078a30ed31e4cbd02" kindref="member">get_pot</ref>(Eigen::MatrixXd&amp;<sp/>tab,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="446" refid="class_s_l_grid_slab_1ae543f10e58a1fff08906695200e53b1a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1ae543f10e58a1fff08906695200e53b1a" kindref="member">get_dens</ref>(Eigen::MatrixXd&amp;<sp/>tab,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="451" refid="class_s_l_grid_slab_1a05989512bdacd27d6025db172b8a57d6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_s_l_grid_slab_1a05989512bdacd27d6025db172b8a57d6" kindref="member">get_force</ref>(Eigen::MatrixXd&amp;<sp/>tab,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>which=1);</highlight></codeline>
-<codeline lineno="452"><highlight class="normal"></highlight></codeline>
-<codeline lineno="455" refid="class_s_l_grid_slab_1aae582c113d6266751ada0612e2658a4c" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_s_l_grid_slab_1aae582c113d6266751ada0612e2658a4c" kindref="member">orthoCheck</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>knots=40);</highlight></codeline>
-<codeline lineno="456"><highlight class="normal"></highlight></codeline>
-<codeline lineno="458"><highlight class="normal"></highlight></codeline>
-<codeline lineno="459"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="460"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>(std::vector&lt;cudaArray_t&gt;&amp;<sp/>cuArray,</highlight></codeline>
-<codeline lineno="461"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>thrust::host_vector&lt;cudaTextureObject_t&gt;&amp;<sp/>tex);</highlight></codeline>
-<codeline lineno="462"><highlight class="normal"></highlight></codeline>
-<codeline lineno="463"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="464"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="465"><highlight class="normal"><sp/><sp/><sp/><sp/>cudaMappingConstants<sp/>ret;</highlight></codeline>
-<codeline lineno="466"><highlight class="normal"></highlight></codeline>
-<codeline lineno="467"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.hscale<sp/>=<sp/><ref refid="class_s_l_grid_slab_1a177ec61236f459a075ac41e36aa7fdc6" kindref="member">H</ref>;</highlight></codeline>
-<codeline lineno="468"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmin<sp/><sp/><sp/>=<sp/><ref refid="class_s_l_grid_slab_1aa8bd43c9df4464f8f32e658a39098905" kindref="member">xmin</ref>;</highlight></codeline>
-<codeline lineno="469"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmax<sp/><sp/><sp/>=<sp/><ref refid="class_s_l_grid_slab_1af409c189501a0ad14774fda616b57714" kindref="member">xmax</ref>;</highlight></codeline>
-<codeline lineno="470"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymin<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="471"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymax<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="472"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numr<sp/><sp/><sp/>=<sp/><ref refid="class_s_l_grid_slab_1ad821ab70b7b032167ae0f57f3a40c5ba" kindref="member">numz</ref>;</highlight></codeline>
-<codeline lineno="473"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numx<sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="474"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numy<sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="475"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dxi<sp/><sp/><sp/><sp/>=<sp/><ref refid="class_s_l_grid_slab_1a721d878a968cdb9098765ebd0c407c50" kindref="member">dxi</ref>;</highlight></codeline>
-<codeline lineno="476"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dyi<sp/><sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="477"><highlight class="normal"></highlight></codeline>
-<codeline lineno="478"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="479"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="480"><highlight class="normal"></highlight></codeline>
-<codeline lineno="481"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="482"><highlight class="normal"></highlight></codeline>
-<codeline lineno="483"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="484"><highlight class="normal"></highlight></codeline>
-<codeline lineno="485"><highlight class="normal"></highlight></codeline>
-<codeline lineno="486"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>_SLGridMP_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="487"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_s_particle_8_h.xml b/doxyxml/_s_particle_8_h.xml
deleted file mode 100644
index 8a73313..0000000
--- a/doxyxml/_s_particle_8_h.xml
+++ /dev/null
@@ -1,126 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_s_particle_8_h" kind="file" language="C++">
-    <compoundname>SParticle.H</compoundname>
-    <includes local="no">Particle.H</includes>
-    <includes refid="localmpi_8_h" local="no">localmpi.H</includes>
-    <includedby refid="_disk2d_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</includedby>
-    <includedby refid="_disk_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</includedby>
-    <incdepgraph>
-      <node id="3">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/SParticle.H</label>
-        <link refid="_s_particle_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Particle.H</label>
-      </node>
-      <node id="6">
-        <label>fstream</label>
-      </node>
-      <node id="7">
-        <label>iomanip</label>
-      </node>
-      <node id="5">
-        <label>iostream</label>
-      </node>
-      <node id="4">
-        <label>mpi.h</label>
-      </node>
-      <node id="8">
-        <label>string</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</label>
-        <link refid="_disk2d_halo_8_h"/>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</label>
-        <link refid="_disk_halo_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/SParticle.H</label>
-        <link refid="_s_particle_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_s_particle" prot="public">SParticle</innerclass>
-    <innerclass refid="class_s_ptype" prot="public">SPtype</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_SParticle_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_SParticle_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Particle.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="localmpi_8_h" kindref="compound">localmpi.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12" refid="class_s_particle" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_s_particle" kindref="compound">SParticle</ref></highlight></codeline>
-<codeline lineno="13"><highlight class="normal">{</highlight></codeline>
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diff --git a/doxyxml/_scatter_m_f_p_8_h.xml b/doxyxml/_scatter_m_f_p_8_h.xml
deleted file mode 100644
index a19fc57..0000000
--- a/doxyxml/_scatter_m_f_p_8_h.xml
+++ /dev/null
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-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_scatter_m_f_p_1a73d169aaee5e69fb1f4b454d392dd731" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_scatter_m_f_p_1aed29cfd923925a1f5873c78d184ff935" kindref="member">tau</ref>,<sp/><ref refid="class_scatter_m_f_p_1adb6bf7494fe8f2e97f43152fddd2af5f" kindref="member">tauscat</ref>,<sp/><ref refid="class_scatter_m_f_p_1a73d169aaee5e69fb1f4b454d392dd731" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="21" refid="class_scatter_m_f_p_1ab495cca48d674260bdb2d2bcbe83b343" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_scatter_m_f_p_1a9407a7b991a5aa8117a0a4c79c672265" kindref="member">tautab</ref>,<sp/><ref refid="class_scatter_m_f_p_1ab495cca48d674260bdb2d2bcbe83b343" kindref="member">nscat</ref>;</highlight></codeline>
-<codeline lineno="22" refid="class_scatter_m_f_p_1a411ba0475adcbe7aa0aeb88365aa7c05" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*<ref refid="class_scatter_m_f_p_1a411ba0475adcbe7aa0aeb88365aa7c05" kindref="member">dtau</ref>,<sp/>*<ref refid="class_scatter_m_f_p_1a692b94400828d737e665380d5159e44f" kindref="member">dtau1</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_scatter_m_f_p_1a5241c197733f89b8e196c3d8b2bbff8a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_scatter_m_f_p_1a5241c197733f89b8e196c3d8b2bbff8a" kindref="member">dr</ref>;</highlight></codeline>
-<codeline lineno="24" refid="class_scatter_m_f_p_1a4ed6d7668b49ee4ee8325abc344f08aa" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;int&gt;<sp/><ref refid="class_scatter_m_f_p_1a4ed6d7668b49ee4ee8325abc344f08aa" kindref="member">cntr</ref>;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_scatter_m_f_p_1ad23096b8721de31192dffeba144b8ffa" refkind="member"><highlight class="normal"><sp/><sp/>vector<sp/>&lt;rpair&gt;<sp/><ref refid="class_scatter_m_f_p_1ad23096b8721de31192dffeba144b8ffa" kindref="member">rr2</ref>;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_scatter_m_f_p_1a8109e209a4086ad31b2f363669ff7567" refkind="member"><highlight class="normal"><sp/><sp/>std::uniform_real_distribution&lt;&gt;<sp/><ref refid="class_scatter_m_f_p_1a8109e209a4086ad31b2f363669ff7567" kindref="member">unif</ref>;</highlight></codeline>
-<codeline lineno="31" refid="class_scatter_m_f_p_1a85e0c642d66af1c527a15b6a098dd903" refkind="member"><highlight class="normal"><sp/><sp/>std::normal_distribution&lt;&gt;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_scatter_m_f_p_1a85e0c642d66af1c527a15b6a098dd903" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_scatter_m_f_p_1a16ad16ba628e117025528ac5e9a9e3ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_scatter_m_f_p_1a16ad16ba628e117025528ac5e9a9e3ae" kindref="member">cntacc</ref>;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_scatter_m_f_p_1ab9115824b19f1ab884e21a091b55ceea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_scatter_m_f_p_1ab9115824b19f1ab884e21a091b55ceea" kindref="member">initialize</ref>();</highlight></codeline>
-<codeline lineno="37" refid="class_scatter_m_f_p_1aa6005f8035bcca611fe96f4d547ceac1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component" kindref="compound">Component</ref><sp/>*<ref refid="class_scatter_m_f_p_1aa6005f8035bcca611fe96f4d547ceac1" kindref="member">c</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Component<sp/>ptr</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_scatter_m_f_p_1a369d45433d9547c25ef12aa272b3ef1e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_scatter_m_f_p_1a369d45433d9547c25ef12aa272b3ef1e" kindref="member">comp_id</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Component<sp/>id</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_scatter_m_f_p_1abd94341a0c14cd031882f2b1f20d4b9c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_scatter_m_f_p_1abd94341a0c14cd031882f2b1f20d4b9c" kindref="member">mfp_index</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Index<sp/>in<sp/>double<sp/>attribute<sp/>list</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>The<sp/>usual<sp/>required<sp/>members</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_scatter_m_f_p_1acdb78f570e82b0efa8740df0a98912b7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_scatter_m_f_p_1acdb78f570e82b0efa8740df0a98912b7" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>C);</highlight></codeline>
-<codeline lineno="44" refid="class_scatter_m_f_p_1a20878d4447a6676b5a0000786084a1b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_scatter_m_f_p_1a20878d4447a6676b5a0000786084a1b8" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_scatter_m_f_p_1add4c53946740d64023146452298b7e6a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_scatter_m_f_p_1add4c53946740d64023146452298b7e6a" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_scatter_m_f_p_1a8bfd6a1e304d3eab672665b2f551db6a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_scatter_m_f_p_1a8bfd6a1e304d3eab672665b2f551db6a" kindref="member">ScatterMFP</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_scatter_m_f_p_1ad702eb7eda7e6390b4d361a546690b06" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_scatter_m_f_p_1ad702eb7eda7e6390b4d361a546690b06" kindref="member">~ScatterMFP</ref>();</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_shells_8_h.xml b/doxyxml/_shells_8_h.xml
deleted file mode 100644
index 5fcab82..0000000
--- a/doxyxml/_shells_8_h.xml
+++ /dev/null
@@ -1,675 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_shells_8_h" kind="file" language="C++">
-    <compoundname>Shells.H</compoundname>
-    <includes local="no">vector</includes>
-    <includes local="no">string</includes>
-    <includes local="no">set</includes>
-    <includes refid="expand_8_h" local="yes">expand.H</includes>
-    <includes refid="interp_8_h" local="yes">interp.H</includes>
-    <includes refid="_axisymmetric_basis_8_h" local="no">AxisymmetricBasis.H</includes>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
-      <node id="32">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="49">
-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="44" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-      </node>
-      <node id="53">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="65">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="60" relation="include">
-        </childnode>
-      </node>
-      <node id="24">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="57">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="43">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="44" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="45" relation="include">
-        </childnode>
-      </node>
-      <node id="64">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="60" relation="include">
-        </childnode>
-        <childnode refid="65" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
-        </childnode>
-      </node>
-      <node id="45">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
-        </childnode>
-      </node>
-      <node id="37">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="51">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="34">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="35" relation="include">
-        </childnode>
-      </node>
-      <node id="52">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-      </node>
-      <node id="41">
-        <label>euler.H</label>
-        <link refid="euler_8_h"/>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="63">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="47">
-        <label>header.H</label>
-        <link refid="header_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-      </node>
-      <node id="56">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="57" relation="include">
-        </childnode>
-      </node>
-      <node id="25">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="36">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="60">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="56" relation="include">
-        </childnode>
-        <childnode refid="61" relation="include">
-        </childnode>
-        <childnode refid="64" relation="include">
-        </childnode>
-      </node>
-      <node id="61">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="62" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="63" relation="include">
-        </childnode>
-      </node>
-      <node id="58">
-        <label>AxisymmetricBasis.H</label>
-        <link refid="_axisymmetric_basis_8_h"/>
-        <childnode refid="59" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="59">
-        <label>Basis.H</label>
-        <link refid="_basis_8_h"/>
-        <childnode refid="50" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="21">
-        <label>Component.H</label>
-        <link refid="_component_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-        <childnode refid="47" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="48" relation="include">
-        </childnode>
-        <childnode refid="49" relation="include">
-        </childnode>
-        <childnode refid="50" relation="include">
-        </childnode>
-        <childnode refid="53" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-      </node>
-      <node id="54">
-        <label>ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
-        <childnode refid="50" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="38">
-        <label>Orient.H</label>
-        <link refid="_orient_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-        <childnode refid="43" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="55">
-        <label>Output.H</label>
-        <link refid="_output_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
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-        <label>/home/weinberg/Projects/EXP/src/Shells.H</label>
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-        <label>chkTimer.H</label>
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-        <childnode refid="11" relation="include">
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-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
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-        <label>coef.H</label>
-        <link refid="src_2coef_8_h"/>
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-        <label>expand.H</label>
-        <link refid="expand_8_h"/>
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-      <node id="27">
-        <label>global.H</label>
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-        </childnode>
-      </node>
-      <node id="18">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="42">
-        <label>Particle.H</label>
-      </node>
-      <node id="40">
-        <label>algorithm</label>
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-      <node id="44">
-        <label>array</label>
-      </node>
-      <node id="35">
-        <label>chrono</label>
-      </node>
-      <node id="11">
-        <label>cmath</label>
-      </node>
-      <node id="6">
-        <label>config_exp.h</label>
-      </node>
-      <node id="10">
-        <label>cstdlib</label>
-      </node>
-      <node id="12">
-        <label>cstring</label>
-      </node>
-      <node id="39">
-        <label>deque</label>
-      </node>
-      <node id="14">
-        <label>fstream</label>
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-      <node id="62">
-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
-      </node>
-      <node id="13">
-        <label>iostream</label>
-      </node>
-      <node id="17">
-        <label>limits</label>
-      </node>
-      <node id="20">
-        <label>list</label>
-      </node>
-      <node id="33">
-        <label>map</label>
-      </node>
-      <node id="28">
-        <label>memory</label>
-      </node>
-      <node id="7">
-        <label>mpi.h</label>
-      </node>
-      <node id="8">
-        <label>pthread.h</label>
-      </node>
-      <node id="26">
-        <label>random</label>
-      </node>
-      <node id="4">
-        <label>set</label>
-      </node>
-      <node id="15">
-        <label>sstream</label>
-      </node>
-      <node id="9">
-        <label>stdexcept</label>
-      </node>
-      <node id="3">
-        <label>string</label>
-      </node>
-      <node id="31">
-        <label>time.h</label>
-      </node>
-      <node id="46">
-        <label>tuple</label>
-      </node>
-      <node id="22">
-        <label>utility</label>
-      </node>
-      <node id="2">
-        <label>vector</label>
-      </node>
-      <node id="23">
-        <label>yaml-cpp/yaml.h</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_shells" prot="public">Shells</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_Shells_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Shells_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;set&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&quot;<ref refid="expand_8_h" kindref="compound">expand.H</ref>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&quot;<ref refid="interp_8_h" kindref="compound">interp.H</ref>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="comment">/*<sp/>provide<sp/>an<sp/>extended<sp/>spherical<sp/>model<sp/>for<sp/>point<sp/>mass<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_axisymmetric_basis_8_h" kindref="compound">AxisymmetricBasis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_shells" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_shells" kindref="compound">Shells</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_pot_accel" kindref="compound">PotAccel</ref></highlight></codeline>
-<codeline lineno="29"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="34" refid="class_shells_1af603375e538442fffdc09788d0dbf567" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;int&gt;<sp/><ref refid="class_shells_1af603375e538442fffdc09788d0dbf567" kindref="member">usedT</ref>;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_shells_1a274a488a7c776f6b0515a72f49395b75" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;double&gt;<sp/>&gt;<sp/><sp/><ref refid="class_shells_1a765595d25c01156e9c9bdf7158c4be6a" kindref="member">rgridT</ref>,<sp/><ref refid="class_shells_1a274a488a7c776f6b0515a72f49395b75" kindref="member">mgridT</ref>;</highlight></codeline>
-<codeline lineno="40" refid="class_shells_1a57377a173c9597159506eb3dd45347ac" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;int&gt;<sp/><sp/><sp/><sp/>&gt;<sp/><sp/><ref refid="class_shells_1a5eca1cb52b886c774015c7f58cf7b7bc" kindref="member">igridT</ref>,<sp/><ref refid="class_shells_1a57377a173c9597159506eb3dd45347ac" kindref="member">igrid</ref>;</highlight></codeline>
-<codeline lineno="41" refid="class_shells_1a8c8606b1ee592086f540c982ffd68f0c" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;int&gt;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_shells_1a8c8606b1ee592086f540c982ffd68f0c" kindref="member">igrid1</ref>;</highlight></codeline>
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-<codeline lineno="45" refid="class_shells_1a63778486c95858397c9c6b56316ed386" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;int&gt;&gt;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_shells_1a63778486c95858397c9c6b56316ed386" kindref="member">update_fr</ref>,<sp/><ref refid="class_shells_1aa052c696e4a8d2d14d0235bd80d685da" kindref="member">update_to</ref>,<sp/><ref refid="class_shells_1a385221ff098048781902b7becc4d2dd2" kindref="member">update_ii</ref>;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_shells_1af5724672fe479a862c5e1ef3aad281c5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_shells_1af5724672fe479a862c5e1ef3aad281c5" kindref="member">determine_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="52" refid="class_shells_1a50553b44e56706a523e145a46acd3697" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_shells_1a50553b44e56706a523e145a46acd3697" kindref="member">determine_acceleration_and_potential</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_shells_1a27b560308b474556d413e4bdcb559708" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_shells_1a27b560308b474556d413e4bdcb559708" kindref="member">determine_coefficients_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="55" refid="class_shells_1a75fe62e9cd2ee5ebc339d39ef453c6df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_shells_1a75fe62e9cd2ee5ebc339d39ef453c6df" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_shells_1a82ef6aca2b7cdef33f46c02cf396e5aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_shells_1a82ef6aca2b7cdef33f46c02cf396e5aa" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_shells_1a204db8b89585cffd5ae09b262fd2f7d7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_shells_1a204db8b89585cffd5ae09b262fd2f7d7" kindref="member">Shells</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68" refid="class_shells_1afed19afb2213fcb211b81779144213b2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_shells_1afed19afb2213fcb211b81779144213b2" kindref="member">~Shells</ref>();</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_shells_1ac28ac4176d1d367723599c113d19f8f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_shells_1ac28ac4176d1d367723599c113d19f8f2" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*);</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_shells_1a1ed597326ac936b3a5fe15a1f5b9f506" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_shells_1a1ed597326ac936b3a5fe15a1f5b9f506" kindref="member">multistep_update_begin</ref>();</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="class_shells_1acc353d16b061c858f6181eaa9df11246" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_shells_1acc353d16b061c858f6181eaa9df11246" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>next,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_shells_1a302dcfe0ce8eed66d351079619b5879a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_shells_1a302dcfe0ce8eed66d351079619b5879a" kindref="member">multistep_update_finish</ref>();</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/Shells.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_sim_ann_8_h.xml b/doxyxml/_sim_ann_8_h.xml
deleted file mode 100644
index 30d4a4b..0000000
--- a/doxyxml/_sim_ann_8_h.xml
+++ /dev/null
@@ -1,193 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_sim_ann_8_h" kind="file" language="C++">
-    <compoundname>SimAnn.H</compoundname>
-    <includes local="no">functional</includes>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">fstream</includes>
-    <includes local="no">random</includes>
-    <includes local="no">limits</includes>
-    <includes local="no">cmath</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/SimAnn.H</label>
-        <link refid="_sim_ann_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>cmath</label>
-      </node>
-      <node id="5">
-        <label>fstream</label>
-      </node>
-      <node id="2">
-        <label>functional</label>
-      </node>
-      <node id="4">
-        <label>iomanip</label>
-      </node>
-      <node id="3">
-        <label>iostream</label>
-      </node>
-      <node id="7">
-        <label>limits</label>
-      </node>
-      <node id="6">
-        <label>random</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_sim_ann" prot="public">SimAnn</innerclass>
-    <sectiondef kind="define">
-      <memberdef kind="define" id="_sim_ann_8_h_1a40ec7c65c727ec0eaa2a372a165bc159" prot="public" static="no">
-        <name>SIM_ANN_HPP_</name>
-        <initializer>1.4</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SimAnn.H" line="2" column="9" bodyfile="/home/weinberg/Projects/EXP/include/SimAnn.H" bodystart="2" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>SIM_ANN_HPP_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2" refid="_sim_ann_8_h_1a40ec7c65c727ec0eaa2a372a165bc159" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>SIM_ANN_HPP_<sp/>1.4</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_USE_MATH_DEFINES</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;functional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;random&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;limits&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="class_sim_ann" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_sim_ann" kindref="compound">SimAnn</ref></highlight></codeline>
-<codeline lineno="15"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="16" refid="class_sim_ann_1a0ec2e143852051e083e5dd88c8930b51" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::function&lt;double(std::vector&lt;double&gt;&amp;)&gt;<sp/><ref refid="class_sim_ann_1a0ec2e143852051e083e5dd88c8930b51" kindref="member">Func1d</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_sim_ann_1a5aad0531bbe37d5ebbf2d7120171fa9b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::function&lt;std::vector&lt;double&gt;(std::vector&lt;double&gt;&amp;)&gt;<sp/><ref refid="class_sim_ann_1a5aad0531bbe37d5ebbf2d7120171fa9b" kindref="member">FuncMap</ref>;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_sim_ann_1adc39a3f39d3473c3686b66fe1d8165c6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sim_ann_1a0ec2e143852051e083e5dd88c8930b51" kindref="member">Func1d</ref><sp/><ref refid="class_sim_ann_1adc39a3f39d3473c3686b66fe1d8165c6" kindref="member">func</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Objective<sp/>function</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_sim_ann_1a640320fe7f3e4b31a1de797c7b9a1cb3" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sim_ann_1a5aad0531bbe37d5ebbf2d7120171fa9b" kindref="member">FuncMap</ref><sp/><ref refid="class_sim_ann_1a640320fe7f3e4b31a1de797c7b9a1cb3" kindref="member">pmap</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameter<sp/>mapping<sp/>for<sp/>output</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_sim_ann_1af98bd436f34dad13b09ba2465364684a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1af98bd436f34dad13b09ba2465364684a" kindref="member">ddwell</ref>;</highlight></codeline>
-<codeline lineno="25" refid="class_sim_ann_1a94f3d5d96e42bc4e7fda280fd1465a20" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a94f3d5d96e42bc4e7fda280fd1465a20" kindref="member">rrange</ref>;</highlight></codeline>
-<codeline lineno="26" refid="class_sim_ann_1a0512b42c3bedd54d710fc53a6064c508" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a0512b42c3bedd54d710fc53a6064c508" kindref="member">t0</ref>;</highlight></codeline>
-<codeline lineno="27" refid="class_sim_ann_1a1305088e71e10a4e9d1a0aa3c19cced8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a1305088e71e10a4e9d1a0aa3c19cced8" kindref="member">K</ref>;</highlight></codeline>
-<codeline lineno="28" refid="class_sim_ann_1ab7edcaf8339803496f5419efbedaa04c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1ab7edcaf8339803496f5419efbedaa04c" kindref="member">rho</ref>;</highlight></codeline>
-<codeline lineno="29" refid="class_sim_ann_1a5657470e78cf7c7126cd13e28f3cc6f0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a5657470e78cf7c7126cd13e28f3cc6f0" kindref="member">dt</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>temperature<sp/>increment<sp/>to<sp/>use<sp/>when<sp/>melting</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_sim_ann_1a0aa857452114450f48f0a16f26cd0301" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a0aa857452114450f48f0a16f26cd0301" kindref="member">tscale</ref><sp/>;</highlight></codeline>
-<codeline lineno="31" refid="class_sim_ann_1aa9be6bd45c38317c5b38c6f533a49183" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1aa9be6bd45c38317c5b38c6f533a49183" kindref="member">maxit</ref>;</highlight></codeline>
-<codeline lineno="32" refid="class_sim_ann_1aab0d1f99c00d08ce70852d9fa32dfa26" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1aab0d1f99c00d08ce70852d9fa32dfa26" kindref="member">c_jump</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>phase<sp/>transition<sp/>step<sp/>size</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_sim_ann_1af970a852f6f416cb2b1befe036afea07" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1af970a852f6f416cb2b1befe036afea07" kindref="member">fsave</ref>;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_sim_ann_1a7cab4f04fc3a8f295f2bd195fedaf929" refkind="member"><highlight class="normal"><sp/><sp/>std::mt19937<sp/><ref refid="class_sim_ann_1a7cab4f04fc3a8f295f2bd195fedaf929" kindref="member">gen</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Random<sp/>number<sp/>generator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_sim_ann_1a70989c6b034a46286f86494fcdef3648" refkind="member"><highlight class="normal"><sp/><sp/>std::uniform_real_distribution&lt;double&gt;<sp/><ref refid="class_sim_ann_1a9e119ba1bc59dde2d091377ff5b3306b" kindref="member">number_range</ref>,<sp/><ref refid="class_sim_ann_1a70989c6b034a46286f86494fcdef3648" kindref="member">number_01</ref>;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_sim_ann_1a7ccbfabce4fa83789c86a46cde2ab97d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a7ccbfabce4fa83789c86a46cde2ab97d" kindref="member">err</ref>;</highlight></codeline>
-<codeline lineno="39" refid="class_sim_ann_1abcc4ed0c8c1dbf93a0dc32a6cfe84db7" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_sim_ann_1abcc4ed0c8c1dbf93a0dc32a6cfe84db7" kindref="member">x</ref>,<sp/><ref refid="class_sim_ann_1acd655bd1ca3733fe4e041d9b1e7c4781" kindref="member">xnew</ref>,<sp/><ref refid="class_sim_ann_1ac29ebf9d3ec73d4151feb28bc4766a7f" kindref="member">xbest</ref>;</highlight></codeline>
-<codeline lineno="40" refid="class_sim_ann_1a7e082d7470b2a2a53377c99ed147c242" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1aee5571003287381eb596e22b12f1513e" kindref="member">y</ref>,<sp/><ref refid="class_sim_ann_1a7e082d7470b2a2a53377c99ed147c242" kindref="member">dy</ref>,<sp/><ref refid="class_sim_ann_1ad14b958020294036f74cf84ae3b2e7c4" kindref="member">ybest</ref>;</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_sim_ann_1ae20159c138105d13f5aa8f75688f7474" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1ae20159c138105d13f5aa8f75688f7474" kindref="member">equilibrate</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="43" refid="class_sim_ann_1adae892c6f4789d5d5c1b754f3bb46565" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_sim_ann_1adae892c6f4789d5d5c1b754f3bb46565" kindref="member">fname</ref>;</highlight></codeline>
-<codeline lineno="44" refid="class_sim_ann_1a7ec2e47c033b31641cd5df9f8af62549" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a7ec2e47c033b31641cd5df9f8af62549" kindref="member">log_state</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="45" refid="class_sim_ann_1a98c8ad464ec63e41c7772882bcf6044c" refkind="member"><highlight class="normal"><sp/><sp/>std::ostream<sp/>*<ref refid="class_sim_ann_1a98c8ad464ec63e41c7772882bcf6044c" kindref="member">str</ref>;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_sim_ann_1a14da64e73384efcf88fc174d8055ff2f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sim_ann_1a14da64e73384efcf88fc174d8055ff2f" kindref="member">SimAnn</ref>()<sp/>:<sp/><ref refid="class_sim_ann_1af98bd436f34dad13b09ba2465364684a" kindref="member">ddwell</ref>(20),<sp/><ref refid="class_sim_ann_1a94f3d5d96e42bc4e7fda280fd1465a20" kindref="member">rrange</ref>(M_PI_2),</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1a0512b42c3bedd54d710fc53a6064c508" kindref="member">t0</ref>(0.0),<sp/><ref refid="class_sim_ann_1a1305088e71e10a4e9d1a0aa3c19cced8" kindref="member">K</ref>(1.0),<sp/><ref refid="class_sim_ann_1ab7edcaf8339803496f5419efbedaa04c" kindref="member">rho</ref>(0.5),<sp/><ref refid="class_sim_ann_1a5657470e78cf7c7126cd13e28f3cc6f0" kindref="member">dt</ref>(0.1),<sp/><ref refid="class_sim_ann_1a0aa857452114450f48f0a16f26cd0301" kindref="member">tscale</ref>(0.1),</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1aa9be6bd45c38317c5b38c6f533a49183" kindref="member">maxit</ref>(400),<sp/><ref refid="class_sim_ann_1aab0d1f99c00d08ce70852d9fa32dfa26" kindref="member">c_jump</ref>(100.0),<sp/><ref refid="class_sim_ann_1af970a852f6f416cb2b1befe036afea07" kindref="member">fsave</ref>(0)</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1a9e119ba1bc59dde2d091377ff5b3306b" kindref="member">number_range</ref><sp/>=<sp/>std::uniform_real_distribution&lt;double&gt;(-<ref refid="class_sim_ann_1a94f3d5d96e42bc4e7fda280fd1465a20" kindref="member">rrange</ref>,<sp/><ref refid="class_sim_ann_1a94f3d5d96e42bc4e7fda280fd1465a20" kindref="member">rrange</ref>);</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1a70989c6b034a46286f86494fcdef3648" kindref="member">number_01</ref><sp/><sp/><sp/><sp/>=<sp/>std::uniform_real_distribution&lt;double&gt;(0.0,<sp/>1.0);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57" refid="class_sim_ann_1a2adc2ee894fd9d131453b73fa16bc0cd" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sim_ann_1a2adc2ee894fd9d131453b73fa16bc0cd" kindref="member">SimAnn</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(std::vector&lt;double&gt;&amp;)&gt;<sp/>f,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>d<sp/>=<sp/>1);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_sim_ann_1a44c6f2c16efe2ebcfd1018b4c85536cc" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sim_ann_1a44c6f2c16efe2ebcfd1018b4c85536cc" kindref="member">~SimAnn</ref>()<sp/></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Nothing<sp/>so<sp/>far</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="65" refid="class_sim_ann_1a9aa8b63c2682c1ec0496eff05f8396c5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a9aa8b63c2682c1ec0496eff05f8396c5" kindref="member">set_up</ref>(<ref refid="class_sim_ann_1a0ec2e143852051e083e5dd88c8930b51" kindref="member">Func1d</ref><sp/>f,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>seed=10);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="69"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="71" refid="class_sim_ann_1a30ca1e887a35c7c59dfa222068748251" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a30ca1e887a35c7c59dfa222068748251" kindref="member">melt</ref><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>iters<sp/>=<sp/>-1);</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_sim_ann_1a702b2663bfc3609ab4335e46caf1e877" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a702b2663bfc3609ab4335e46caf1e877" kindref="member">anneal</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>iters<sp/>=<sp/>-1);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1aa9be6bd45c38317c5b38c6f533a49183" kindref="member">maxit</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79" refid="class_sim_ann_1a71ed23c796300b121eb7134944db6976" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a71ed23c796300b121eb7134944db6976" kindref="member">dwell</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>d<sp/>=<sp/>-1)<sp/><sp/><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>d<sp/>&gt;<sp/>0<sp/>)<sp/><ref refid="class_sim_ann_1af98bd436f34dad13b09ba2465364684a" kindref="member">ddwell</ref><sp/>=<sp/>d;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1af98bd436f34dad13b09ba2465364684a" kindref="member">ddwell</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_sim_ann_1a595d97ae542a87095840fe899cefa1f8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a595d97ae542a87095840fe899cefa1f8" kindref="member">Boltzmann</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>k<sp/>=<sp/>-1.0)</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>k<sp/>&gt;<sp/>0.0<sp/>)<sp/><ref refid="class_sim_ann_1a1305088e71e10a4e9d1a0aa3c19cced8" kindref="member">K</ref><sp/>=<sp/>k;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a1305088e71e10a4e9d1a0aa3c19cced8" kindref="member">K</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="85" refid="class_sim_ann_1afa312929c01db4d0429bbbe33434db6d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1afa312929c01db4d0429bbbe33434db6d" kindref="member">learning_rate</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r<sp/>=<sp/>-1.0)</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>r<sp/>&gt;<sp/>0.0<sp/>)<sp/><ref refid="class_sim_ann_1ab7edcaf8339803496f5419efbedaa04c" kindref="member">rho</ref><sp/>=<sp/>r;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1ab7edcaf8339803496f5419efbedaa04c" kindref="member">rho</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_sim_ann_1ad2f0499488a5c74b86044f77c63f4c6a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1ad2f0499488a5c74b86044f77c63f4c6a" kindref="member">temperature</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>t<sp/>=<sp/>-1.0)</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>t<sp/>&gt;<sp/>0.0<sp/>)<sp/><ref refid="class_sim_ann_1a0512b42c3bedd54d710fc53a6064c508" kindref="member">t0</ref><sp/>=<sp/>t;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a0512b42c3bedd54d710fc53a6064c508" kindref="member">t0</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_sim_ann_1accde6cb2f42366109a58055dff05787d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1accde6cb2f42366109a58055dff05787d" kindref="member">jump</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>j<sp/>=<sp/>-1.0)</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>j<sp/>&gt;<sp/>0.0<sp/>)<sp/><ref refid="class_sim_ann_1aab0d1f99c00d08ce70852d9fa32dfa26" kindref="member">c_jump</ref><sp/>=<sp/>j;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1aab0d1f99c00d08ce70852d9fa32dfa26" kindref="member">c_jump</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94" refid="class_sim_ann_1aaee3d64a961fa3df6b1ba789230226a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1aaee3d64a961fa3df6b1ba789230226a4" kindref="member">range</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r<sp/>=<sp/>-1.0)</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/>r<sp/>&gt;<sp/>0.0<sp/>)<sp/>{</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1a94f3d5d96e42bc4e7fda280fd1465a20" kindref="member">rrange</ref><sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1a9e119ba1bc59dde2d091377ff5b3306b" kindref="member">number_range</ref><sp/>=<sp/>std::uniform_real_distribution&lt;double&gt;(-r,r);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a94f3d5d96e42bc4e7fda280fd1465a20" kindref="member">rrange</ref>;<sp/></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103" refid="class_sim_ann_1a139aedb9b6fed482e463d71485894ca1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a139aedb9b6fed482e463d71485894ca1" kindref="member">initial</ref><sp/>(std::vector&lt;double&gt;&amp;<sp/>xi)<sp/>{<sp/><ref refid="class_sim_ann_1abcc4ed0c8c1dbf93a0dc32a6cfe84db7" kindref="member">x</ref><sp/>=<sp/>xi;<sp/>}</highlight></codeline>
-<codeline lineno="104" refid="class_sim_ann_1a9906a615f365c3be71b9976f558cd11b" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_sim_ann_1a9906a615f365c3be71b9976f558cd11b" kindref="member">current</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1abcc4ed0c8c1dbf93a0dc32a6cfe84db7" kindref="member">x</ref>;<sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="105" refid="class_sim_ann_1ad0b259a0b490ab224fd3f3dc6c70c8ee" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_sim_ann_1ad0b259a0b490ab224fd3f3dc6c70c8ee" kindref="member">optimum</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1ac29ebf9d3ec73d4151feb28bc4766a7f" kindref="member">xbest</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107" refid="class_sim_ann_1a0a68232d4388433ac5bba2ea6642a4a1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a0a68232d4388433ac5bba2ea6642a4a1" kindref="member">save_states</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name)</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1af970a852f6f416cb2b1befe036afea07" kindref="member">fsave</ref><sp/>=<sp/>1;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1adae892c6f4789d5d5c1b754f3bb46565" kindref="member">fname</ref><sp/>=<sp/>name;</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113" refid="class_sim_ann_1a3e983bc3434505678807d1ccc8352ed1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sim_ann_1a3e983bc3434505678807d1ccc8352ed1" kindref="member">report_states</ref>(std::ostream&amp;<sp/>out)</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1af970a852f6f416cb2b1befe036afea07" kindref="member">fsave</ref><sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sim_ann_1a98c8ad464ec63e41c7772882bcf6044c" kindref="member">str</ref><sp/><sp/><sp/>=<sp/>&amp;out;</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/SimAnn.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_slab_s_l_8_h.xml b/doxyxml/_slab_s_l_8_h.xml
deleted file mode 100644
index b442c6b..0000000
--- a/doxyxml/_slab_s_l_8_h.xml
+++ /dev/null
@@ -1,488 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_slab_s_l_8_h" kind="file" language="C++">
-    <compoundname>SlabSL.H</compoundname>
-    <includes local="no">complex</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes local="no">unsupported/Eigen/CXX11/Tensor</includes>
-    <includes local="no">Coefficients.H</includes>
-    <includes refid="_s_l_grid_m_p2_8_h" local="no">SLGridMP2.H</includes>
-    <includes refid="biorth1d_8_h" local="no">biorth1d.H</includes>
-    <includes refid="_pot_accel_8_h" local="no">PotAccel.H</includes>
-    <incdepgraph>
-      <node id="29">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="21">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="28">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="32" relation="include">
-        </childnode>
-      </node>
-      <node id="40">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="41">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-      </node>
-      <node id="35">
-        <label>biorth.H</label>
-        <link refid="biorth_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="33">
-        <label>biorth1d.H</label>
-        <link refid="biorth1d_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="35" relation="include">
-        </childnode>
-      </node>
-      <node id="25">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-      </node>
-      <node id="32">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
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-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-      </node>
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-        <label>orbit.H</label>
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-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_slab_s_l_1aa1d43333ba857a58169ec6a428be3473" kindref="member">grid</ref>-&gt;initialize_cuda(cuInterpArray,<sp/>tex);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_zero_coefs();</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121" refid="class_slab_s_l_1a61a7a2f2d1306ae8e71ccd9fc049d7a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1a61a7a2f2d1306ae8e71ccd9fc049d7a7" kindref="member">ngrid</ref><sp/>=<sp/>1000;</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124" refid="class_slab_s_l_1a90f47058bbda05bc7ad8771fa567b354" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_slab_s_l_1a90f47058bbda05bc7ad8771fa567b354" kindref="member">type</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;isothermal&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="128" refid="class_slab_s_l_1ade2ef48d95981861d5dba8eb8fe1b392" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1ade2ef48d95981861d5dba8eb8fe1b392" kindref="member">determine_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="129" refid="class_slab_s_l_1a0424b21e20c21a17fd2180fc0b5eeba1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1a0424b21e20c21a17fd2180fc0b5eeba1" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*);</highlight></codeline>
-<codeline lineno="131"></codeline>
-<codeline lineno="133" refid="class_slab_s_l_1acf131843a426e15f93065da298737934" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1acf131843a426e15f93065da298737934" kindref="member">swap_coefs</ref>(std::vector&lt;coefType&gt;&amp;<sp/>from,<sp/>std::vector&lt;coefType&gt;&amp;<sp/>to)</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(from.size()<sp/>!=<sp/>to.size())<sp/>{</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;swap_coefs:<sp/>size(from)=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>from.size()<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>!=<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;size(to)=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>to.size();</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;coefType&gt;<sp/>tmp(from);</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/>from<sp/>=<sp/>to;</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/>to<sp/><sp/><sp/>=<sp/>tmp;</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="149" refid="class_slab_s_l_1a86e9fff4171b9d29f9550ce73727f1c0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_slab_s_l_1a86e9fff4171b9d29f9550ce73727f1c0" kindref="member">determine_coefficients_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="150" refid="class_slab_s_l_1ac45b33a96db109994ba0fe35547a3269" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_slab_s_l_1ac45b33a96db109994ba0fe35547a3269" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="152"></codeline>
-<codeline lineno="157" refid="class_slab_s_l_1a1b767b7d6539901a8cd4a2c95f2587f3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1a1b767b7d6539901a8cd4a2c95f2587f3" kindref="member">compute_multistep_coefficients</ref>();</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160"></codeline>
-<codeline lineno="161" refid="class_slab_s_l_1a3d092fffb3a9ad22e087da55836793cb" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;coefType&gt;<sp/>&gt;<sp/><ref refid="class_slab_s_l_1a3d092fffb3a9ad22e087da55836793cb" kindref="member">differ1</ref>;</highlight></codeline>
-<codeline lineno="162" refid="class_slab_s_l_1a218f2b58cceddc3f6e806abf2f398986" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::complex&lt;double&gt;<sp/>&gt;<sp/><ref refid="class_slab_s_l_1a218f2b58cceddc3f6e806abf2f398986" kindref="member">pack</ref>,<sp/><ref refid="class_slab_s_l_1a240fe5a1f485bf015eacb51ac09c10d9" kindref="member">unpack</ref>;</highlight></codeline>
-<codeline lineno="164"></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167" refid="class_slab_s_l_1a0cf74b3103814010731c05f9cba94498" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_slab_s_l_1a0cf74b3103814010731c05f9cba94498" kindref="member">coefTypePtr</ref><sp/>=<sp/>std::shared_ptr&lt;coefType&gt;;</highlight></codeline>
-<codeline lineno="168" refid="class_slab_s_l_1a00bf7aee439434580338f8897173c695" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;coefTypePtr&gt;<sp/><ref refid="class_slab_s_l_1a00bf7aee439434580338f8897173c695" kindref="member">expccofN</ref>;</highlight></codeline>
-<codeline lineno="169" refid="class_slab_s_l_1a62f99bc0a639b0f1bd29e9ee1fd6d715" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;coefTypePtr&gt;<sp/><ref refid="class_slab_s_l_1a62f99bc0a639b0f1bd29e9ee1fd6d715" kindref="member">expccofL</ref>;</highlight></codeline>
-<codeline lineno="171"></codeline>
-<codeline lineno="177" refid="class_slab_s_l_1a200cb31ebcaa0d7573aece5765d5a0bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1a200cb31ebcaa0d7573aece5765d5a0bb" kindref="member">multistep_update_begin</ref>();</highlight></codeline>
-<codeline lineno="178" refid="class_slab_s_l_1a4a725652fef931de51889699f6f942db" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1a4a725652fef931de51889699f6f942db" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>next,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="179" refid="class_slab_s_l_1a7cffd18e053e3cdf8cfc459430019238" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1a7cffd18e053e3cdf8cfc459430019238" kindref="member">multistep_update_finish</ref>();</highlight></codeline>
-<codeline lineno="181"></codeline>
-<codeline lineno="183" refid="class_slab_s_l_1abcc90c9b4986352c5ba1fc19bd07f47d" refkind="member"><highlight class="normal"><sp/><sp/>CoefClasses::SlabCoefs<sp/><ref refid="class_slab_s_l_1abcc90c9b4986352c5ba1fc19bd07f47d" kindref="member">slabCoefs</ref>;</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"></highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Biorth<sp/>ID</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="186" refid="class_slab_s_l_1a6d0b51f5f0db708c5eabc84c9d5a56b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1a6d0b51f5f0db708c5eabc84c9d5a56b8" kindref="member">ID</ref>=1;</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"></highlight></codeline>
-<codeline lineno="188"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191" refid="class_slab_s_l_1adcfe2a7cda812280a978793ccd8997e8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1adcfe2a7cda812280a978793ccd8997e8" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194" refid="class_slab_s_l_1a0657ce43ccefeb7b32ce5ef83d31f747" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_slab_s_l_1a0657ce43ccefeb7b32ce5ef83d31f747" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight></codeline>
-<codeline lineno="199" refid="class_slab_s_l_1aa5680ab11124aa23c2cb1fdcb5c511a8" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_slab_s_l_1aa5680ab11124aa23c2cb1fdcb5c511a8" kindref="member">id</ref>;</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
-<codeline lineno="202" refid="class_slab_s_l_1a794cfa67733dd42c028a7f966c743218" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_slab_s_l_1a794cfa67733dd42c028a7f966c743218" kindref="member">SlabSL</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205" refid="class_slab_s_l_1a7635145cb28d52b58c2863045ec0d410" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1a7635145cb28d52b58c2863045ec0d410" kindref="member">~SlabSL</ref>();</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="208" refid="class_slab_s_l_1aa35f069d1743fa627eea28b53e78f514" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_slab_s_l_1aa35f069d1743fa627eea28b53e78f514" kindref="member">dump_coefs_h5</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="209"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211"><highlight class="normal"></highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/SlabSL.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_snap_batch_8_h.xml b/doxyxml/_snap_batch_8_h.xml
deleted file mode 100644
index 312fadb..0000000
--- a/doxyxml/_snap_batch_8_h.xml
+++ /dev/null
@@ -1,143 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_snap_batch_8_h" kind="file" language="C++">
-    <compoundname>SnapBatch.H</compoundname>
-    <includes local="no">algorithm</includes>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">fstream</includes>
-    <includes local="no">string</includes>
-    <includes local="no">vector</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/Analysis/SnapBatch.H</label>
-        <link refid="_snap_batch_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>algorithm</label>
-      </node>
-      <node id="5">
-        <label>fstream</label>
-      </node>
-      <node id="4">
-        <label>iomanip</label>
-      </node>
-      <node id="3">
-        <label>iostream</label>
-      </node>
-      <node id="6">
-        <label>string</label>
-      </node>
-      <node id="7">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="_snap_batch_8_h_1a781bd3e50f67ed28d9597cfba5f5c8ba" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::vector&lt; std::vector&lt; std::string &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt; std::string &gt; &gt; snap_batcher</definition>
-        <argsstring>(const std::string &amp;file, const std::string &amp;delimit)</argsstring>
-        <name>snap_batcher</name>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>delimit</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SnapBatch.H" line="11" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SnapBatch.H" bodystart="12" bodyend="62"/>
-        <references refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" compoundref="model3d_8_h" startline="4">file</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_SnapBatch_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_SnapBatch_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;algorithm&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="_snap_batch_8_h_1a781bd3e50f67ed28d9597cfba5f5c8ba" refkind="member"><highlight class="normal">std::vector&lt;std::vector&lt;std::string&gt;&gt;<sp/><ref refid="_snap_batch_8_h_1a781bd3e50f67ed28d9597cfba5f5c8ba" kindref="member">snap_batcher</ref></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>delimit)</highlight></codeline>
-<codeline lineno="13"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;std::string&gt;&gt;<sp/>batches;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/><sp/>std::ifstream<sp/>in(<ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(in)<sp/>{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/>files;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/>name;</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal">(in<sp/>&gt;&gt;<sp/>name)<sp/>files.push_back(name);</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/>std::sort(files.begin(),<sp/>files.end());</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/>batch;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/>templ;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>f<sp/>:<sp/>files)<sp/>{</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::size_t<sp/>found<sp/>=<sp/>f.find_last_of(delimit);</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>No<sp/>delimiter?</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>batch.push_back(f);</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>batches.push_back(batch);</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>batch.clear();</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Found<sp/>a<sp/>delimiter</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>trimmed<sp/>=<sp/>f.substr(0,<sp/>found);</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(batch.size()==0)<sp/>{</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>templ<sp/>=<sp/>trimmed;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>batch.push_back(f);</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(trimmed<sp/>==<sp/>templ)<sp/>{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>batch.push_back(f);</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Mismatch:<sp/>new<sp/>batch</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(batch.size())<sp/>{</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>batches.push_back(batch);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>batch.clear();</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>templ<sp/>=<sp/>trimmed;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>batch.push_back(f);</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Error<sp/>opening<sp/>file<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>batches;</highlight></codeline>
-<codeline lineno="62"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/SnapBatch.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_species_8_h.xml b/doxyxml/_species_8_h.xml
deleted file mode 100644
index 0603eed..0000000
--- a/doxyxml/_species_8_h.xml
+++ /dev/null
@@ -1,386 +0,0 @@
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diff --git a/doxyxml/_sph_s_l_8_h.xml b/doxyxml/_sph_s_l_8_h.xml
deleted file mode 100644
index 707f38e..0000000
--- a/doxyxml/_sph_s_l_8_h.xml
+++ /dev/null
@@ -1,362 +0,0 @@
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-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_s_l_grid_m_p2_8_h" kindref="compound">SLGridMP2.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="localmpi_8_h" kindref="compound">localmpi.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="class_sph_s_l" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_sph_s_l" kindref="compound">SphSL</ref></highlight></codeline>
-<codeline lineno="15"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_sph_s_l_1a646da787ac7598df4c4faeea9c882e72" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SLGridSph&gt;<sp/><ref refid="class_sph_s_l_1a646da787ac7598df4c4faeea9c882e72" kindref="member">sl</ref>;</highlight></codeline>
-<codeline lineno="20" refid="class_sph_s_l_1abc22876a683448046156a54269e8bc73" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1abc22876a683448046156a54269e8bc73" kindref="member">lmax</ref>,<sp/><ref refid="class_sph_s_l_1a05d4ce6810932347899461c845e985c9" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="21" refid="class_sph_s_l_1ac84a9750582da713a137eda0d6285984" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a9db5cca67563e686232fe6ac05dad282" kindref="member">rmin</ref>,<sp/><ref refid="class_sph_s_l_1ac84a9750582da713a137eda0d6285984" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="class_sph_s_l_1a7c888d9035d66d0952f5f916e529aa94" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_sph_s_l_1a8a72b80960d628509aea5ead8d5bb5eb" kindref="member">potd</ref>,<sp/><ref refid="class_sph_s_l_1aaa36e6af43205045b09a4f0aaba2e9d3" kindref="member">dpot</ref>,<sp/><ref refid="class_sph_s_l_1af5a5f1d5f05d009fe6e0ecd877bdd937" kindref="member">dpt2</ref>,<sp/><ref refid="class_sph_s_l_1a7c888d9035d66d0952f5f916e529aa94" kindref="member">dend</ref>;</highlight></codeline>
-<codeline lineno="24" refid="class_sph_s_l_1a87bfdfe5179e2274b3eefc0023bf362a" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_sph_s_l_1a8abf3dfbafd87bfc9c0f08b9a305bf5b" kindref="member">legs</ref>,<sp/><ref refid="class_sph_s_l_1a501c85f6c8e807f525ddd048fbf2f846" kindref="member">dlegs</ref>,<sp/><ref refid="class_sph_s_l_1a87bfdfe5179e2274b3eefc0023bf362a" kindref="member">d2legs</ref>;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_sph_s_l_1a78463bb857162b66ebc22d7476c6ba2b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a78463bb857162b66ebc22d7476c6ba2b" kindref="member">coefs_defined</ref>;</highlight></codeline>
-<codeline lineno="27" refid="class_sph_s_l_1a4ec7b43106f56c54f8fa19a47e5fb67f" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_sph_s_l_1a4ec7b43106f56c54f8fa19a47e5fb67f" kindref="member">factorial</ref>;</highlight></codeline>
-<codeline lineno="28" refid="class_sph_s_l_1a04d70545f5f2c8e1865fba292a4c3bdf" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_sph_s_l_1a04d70545f5f2c8e1865fba292a4c3bdf" kindref="member">expcoef</ref>;</highlight></codeline>
-<codeline lineno="29" refid="class_sph_s_l_1ad36aa73535e8c1d427d1129d2f96b006" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1ad36aa73535e8c1d427d1129d2f96b006" kindref="member">rscl</ref>;</highlight></codeline>
-<codeline lineno="30" refid="class_sph_s_l_1a6b9d4c1067f35ba9473f68495a620b1a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a6b9d4c1067f35ba9473f68495a620b1a" kindref="member">used</ref>;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_sph_s_l_1a30744f045b72d41197971f26588cf73a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a30744f045b72d41197971f26588cf73a" kindref="member">compute_covar</ref>;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_sph_s_l_1a4c0055b5874cdaef33d778ace1805ea5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_sph_s_l_1a4c0055b5874cdaef33d778ace1805ea5" kindref="member">matT</ref><sp/>=<sp/>std::vector&lt;Eigen::MatrixXd&gt;;</highlight></codeline>
-<codeline lineno="35" refid="class_sph_s_l_1ab061fb52a395bc192430ddae492f6c5e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_sph_s_l_1ab061fb52a395bc192430ddae492f6c5e" kindref="member">vecT</ref><sp/>=<sp/>std::vector&lt;Eigen::VectorXd&gt;;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_sph_s_l_1add31a346d78f04aa42f8193359a71d3d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sph_s_l_1a4c0055b5874cdaef33d778ace1805ea5" kindref="member">matT</ref><sp/><ref refid="class_sph_s_l_1add31a346d78f04aa42f8193359a71d3d" kindref="member">covar</ref>;</highlight></codeline>
-<codeline lineno="38" refid="class_sph_s_l_1ae0ea8b274b0356391d1031532abc6811" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sph_s_l_1ab061fb52a395bc192430ddae492f6c5e" kindref="member">vecT</ref><sp/><ref refid="class_sph_s_l_1ae0ea8b274b0356391d1031532abc6811" kindref="member">mean</ref>;</highlight></codeline>
-<codeline lineno="39" refid="class_sph_s_l_1ad641e1328aed1c0c56e35bebf847b0e8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sph_s_l_1ab061fb52a395bc192430ddae492f6c5e" kindref="member">vecT</ref><sp/><ref refid="class_sph_s_l_1ad641e1328aed1c0c56e35bebf847b0e8" kindref="member">svar</ref>;</highlight></codeline>
-<codeline lineno="40" refid="class_sph_s_l_1a9425160621626af51cc9df5e4af59520" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sph_s_l_1a4c0055b5874cdaef33d778ace1805ea5" kindref="member">matT</ref><sp/><ref refid="class_sph_s_l_1a9425160621626af51cc9df5e4af59520" kindref="member">uvec</ref>;</highlight></codeline>
-<codeline lineno="41" refid="class_sph_s_l_1a0e213fdbc73023e17600f40f5337a04d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a0e213fdbc73023e17600f40f5337a04d" kindref="member">totalMass</ref>;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_sph_s_l_1a127b51dfd6b985b1f227e5e939f1a1bd" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;vecT&gt;<sp/><ref refid="class_sph_s_l_1a127b51dfd6b985b1f227e5e939f1a1bd" kindref="member">meanB</ref>;</highlight></codeline>
-<codeline lineno="44" refid="class_sph_s_l_1a172a37c4b0918902a6d326c298d3bba7" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_sph_s_l_1a172a37c4b0918902a6d326c298d3bba7" kindref="member">massB</ref>;</highlight></codeline>
-<codeline lineno="45" refid="class_sph_s_l_1ab6a104467e2eee94aed94037fd6d9256" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a63b337ab800bb0789204dfa255286e11" kindref="member">npart</ref>,<sp/><ref refid="class_sph_s_l_1ab6a104467e2eee94aed94037fd6d9256" kindref="member">curbin</ref>;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_sph_s_l_1a18b3cdc7761fe54afdbb9fafbc8432c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a48df205c40b2338b96208f0ec93e8a03" kindref="member">minSNR</ref>,<sp/><ref refid="class_sph_s_l_1a18b3cdc7761fe54afdbb9fafbc8432c2" kindref="member">maxSNR</ref>;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_sph_s_l_1ad2a1e490eea1a7ace6a4164d92c8b934" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_sph_s_l_1ad2a1e490eea1a7ace6a4164d92c8b934" kindref="member">work</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_sph_s_l_1aa274dd1580e64807ea77d08661b4f272" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1aa274dd1580e64807ea77d08661b4f272" kindref="member">bomb</ref>(</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*s);</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_sph_s_l_1a930da1da9375b59ba66d77f6744e22c7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a930da1da9375b59ba66d77f6744e22c7" kindref="member">cmagic</ref><sp/>=<sp/>0xc0a57a2;</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>Eigen::Matrix&lt;double,<sp/>Eigen::Dynamic,<sp/>Eigen::Dynamic,<sp/>Eigen::ColMajor&gt;</highlight></codeline>
-<codeline lineno="58" refid="class_sph_s_l_1a8bab3f49b8435b6dc775e56f0af89054" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sph_s_l_1a8bab3f49b8435b6dc775e56f0af89054" kindref="member">EigenColMajor</ref>;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63" refid="class_sph_s_l_1a5341da43cd684f8d4bc2ac8dbd79b946" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a5341da43cd684f8d4bc2ac8dbd79b946" kindref="member">NEV</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_sph_s_l_1a0befac0479ce8dfb2c082f03165dbd56" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a0befac0479ce8dfb2c082f03165dbd56" kindref="member">NUMR</ref>;</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_sph_s_l_1a67986223672bb1114d69afe782c5da95" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a67986223672bb1114d69afe782c5da95" kindref="member">mpi</ref>;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_sph_s_l_1a122af0e8ffe78ea0fdb1a0892fa14d21" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a122af0e8ffe78ea0fdb1a0892fa14d21" kindref="member">HEXP</ref>;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_sph_s_l_1ac660e765c2fb2132756ff99d28b8764a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sph_s_l_1ac660e765c2fb2132756ff99d28b8764a" kindref="member">SphSL</ref>(std::shared_ptr&lt;SphericalModelTable&gt;<sp/>mod,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>LMAX,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NMAX,</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>CMAP=0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>SCALE=0.067,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>COVAR=</highlight><highlight class="keyword">false</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NPART=0);</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="87" refid="class_sph_s_l_1aeafe895d9b063bf8b99a1b4d50354571" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sph_s_l_1aeafe895d9b063bf8b99a1b4d50354571" kindref="member">~SphSL</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="90" refid="class_sph_s_l_1ad14bfbb766ace476d4211ad8caab176e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1ad14bfbb766ace476d4211ad8caab176e" kindref="member">set_scale</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>scl)<sp/>{<sp/><ref refid="class_sph_s_l_1ad36aa73535e8c1d427d1129d2f96b006" kindref="member">rscl</ref><sp/>=<sp/>scl;<sp/>}</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_sph_s_l_1a78fa63af82f500d5beb58b700cc5f477" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a78fa63af82f500d5beb58b700cc5f477" kindref="member">reset_coefs</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="class_sph_s_l_1a6454c41a1d59f53ba6b6c77f4e08930a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a6454c41a1d59f53ba6b6c77f4e08930a" kindref="member">make_coefs</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_sph_s_l_1a0be9194b63b9e0a0864306231973bcab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a0be9194b63b9e0a0864306231973bcab" kindref="member">make_covar</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>verbose=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_sph_s_l_1a68903756b0a162ba408129701b3823b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a68903756b0a162ba408129701b3823b8" kindref="member">install_coefs</ref>(Eigen::MatrixXd&amp;<sp/>newcoef);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_sph_s_l_1a0aa7582a73c17d16ba25f8e860748dc9" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_sph_s_l_1a0aa7582a73c17d16ba25f8e860748dc9" kindref="member">retrieve_coefs</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a04d70545f5f2c8e1865fba292a4c3bdf" kindref="member">expcoef</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_sph_s_l_1a3a07394c4dd0445d597db2dd6d46b88a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a3a07394c4dd0445d597db2dd6d46b88a" kindref="member">getMinSNR</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a48df205c40b2338b96208f0ec93e8a03" kindref="member">minSNR</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_sph_s_l_1a140d9cf383f197b5e79ef6a3335303ee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a140d9cf383f197b5e79ef6a3335303ee" kindref="member">getMaxSNR</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a18b3cdc7761fe54afdbb9fafbc8432c2" kindref="member">maxSNR</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_sph_s_l_1a17812bffe550498ed83972cad844a308" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a17812bffe550498ed83972cad844a308" kindref="member">getMass</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a0e213fdbc73023e17600f40f5337a04d" kindref="member">totalMass</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117" refid="class_sph_s_l_1a34a104932ca9367c7c1eba7a0bee96a8" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_sph_s_l_1a34a104932ca9367c7c1eba7a0bee96a8" kindref="member">get_trimmed</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>snr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>Hall=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120" refid="class_sph_s_l_1ad6105c4e0e77a9e631e4ec125c35d7b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1ad6105c4e0e77a9e631e4ec125c35d7b0" kindref="member">get_power</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>snr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass);</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123" refid="class_sph_s_l_1a057b1e689049e1e87203bcefb8962a70" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_sph_s_l_1a057b1e689049e1e87203bcefb8962a70" kindref="member">retrieve_covar</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1add31a346d78f04aa42f8193359a71d3d" kindref="member">covar</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126" refid="class_sph_s_l_1a6e45fb63b6d26033af1b94d87bd87b96" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_sph_s_l_1a6e45fb63b6d26033af1b94d87bd87b96" kindref="member">get_pot</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/><ref refid="class_sph_s_l_1a646da787ac7598df4c4faeea9c882e72" kindref="member">sl</ref>-&gt;get_pot(<ref refid="class_sph_s_l_1a8a72b80960d628509aea5ead8d5bb5eb" kindref="member">potd</ref>,x);<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a8a72b80960d628509aea5ead8d5bb5eb" kindref="member">potd</ref>;}</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//sl-&gt;get_dens<sp/>(dend,<sp/>r/rscl);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//sl-&gt;get_pot<sp/><sp/>(potd,<sp/>r/rscl);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//sl-&gt;get_force(dpot,<sp/>r/rscl);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="130"><highlight class="normal"></highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133" refid="class_sph_s_l_1a5f4b82b3684bcdfa5b15770152065fab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a5f4b82b3684bcdfa5b15770152065fab" kindref="member">accumulate</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass);</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="136" refid="class_sph_s_l_1a382d88ecd625ea72257d1a822ce405cb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a382d88ecd625ea72257d1a822ce405cb" kindref="member">dens_pot_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>costh,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dens,<sp/></highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl,</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L2=10000,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N2=10000);</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142" refid="class_sph_s_l_1a071751f784e4cbb08cbe63885e7c4564" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a071751f784e4cbb08cbe63885e7c4564" kindref="member">pot_force_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>costh,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>pott,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potp,</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L2=10000,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N2=10000);</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="146" refid="class_sph_s_l_1a60c76935b78787bb3c25d2d3bcbbd27f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a60c76935b78787bb3c25d2d3bcbbd27f" kindref="member">all_eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>costh,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>den0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>den1,</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>pot0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>pot1,</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>pott,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potp,</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L2=10000,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N2=10000);</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153" refid="class_sph_s_l_1a1af10e4a0d69d827f25fef84a36787f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a1af10e4a0d69d827f25fef84a36787f2" kindref="member">getLmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1abc22876a683448046156a54269e8bc73" kindref="member">lmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156" refid="class_sph_s_l_1a2421f46e29dc076412c8294c2f96ae5a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a2421f46e29dc076412c8294c2f96ae5a" kindref="member">getNmax</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a05d4ce6810932347899461c845e985c9" kindref="member">nmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"></highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>@{<sp/>Evaluate<sp/>Legendre<sp/>polynomials<sp/>and<sp/>derivatives</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_sph_s_l_1a3705afbc885f51e099f865fc0dd4e859" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a3705afbc885f51e099f865fc0dd4e859" kindref="member">legendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1abc22876a683448046156a54269e8bc73" kindref="member">lmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::MatrixXd<sp/>&amp;p);</highlight></codeline>
-<codeline lineno="160" refid="class_sph_s_l_1a5fb28740b25c0cba8e6244bd51da0ba3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a5fb28740b25c0cba8e6244bd51da0ba3" kindref="member">legendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1abc22876a683448046156a54269e8bc73" kindref="member">lmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::MatrixXd<sp/>&amp;p,<sp/>Eigen::MatrixXd<sp/>&amp;dp);</highlight></codeline>
-<codeline lineno="161" refid="class_sph_s_l_1abc4dea9519450ac243bbcf0dce9b11cb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1abc4dea9519450ac243bbcf0dce9b11cb" kindref="member">legendre_R</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1abc22876a683448046156a54269e8bc73" kindref="member">lmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::MatrixXd<sp/>&amp;p,<sp/>Eigen::MatrixXd<sp/>&amp;dp,</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>d2p);</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>@}</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="164"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166" refid="class_sph_s_l_1a87c1d60465a1d18ffa2665b05fedae3d" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SLGridSph&gt;<sp/><ref refid="class_sph_s_l_1a87c1d60465a1d18ffa2665b05fedae3d" kindref="member">basis</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1a646da787ac7598df4c4faeea9c882e72" kindref="member">sl</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169" refid="class_sph_s_l_1ab3a34ae7efa8a490566ecb632254baed" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sph_s_l_1ab3a34ae7efa8a490566ecb632254baed" kindref="member">dump_coefs</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>time,<sp/>std::ostream&amp;<sp/>out);</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="171"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"></highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_sphere_8_h.xml b/doxyxml/_sphere_8_h.xml
deleted file mode 100644
index 567861e..0000000
--- a/doxyxml/_sphere_8_h.xml
+++ /dev/null
@@ -1,471 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_sphere_8_h" kind="file" language="C++">
-    <compoundname>Sphere.H</compoundname>
-    <includes local="no">memory</includes>
-    <includes local="no">map</includes>
-    <includes refid="_s_l_grid_m_p2_8_h" local="no">SLGridMP2.H</includes>
-    <includes refid="_spherical_basis_8_h" local="no">SphericalBasis.H</includes>
-    <includedby refid="_two_center_8_h" local="no">/home/weinberg/Projects/EXP/src/TwoCenter.H</includedby>
-    <incdepgraph>
-      <node id="26">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="25">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-      </node>
-      <node id="38">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="39">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-      </node>
-      <node id="22">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="17">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="29">
-        <label>libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="25" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="27">
-        <label>sltableMP2.H</label>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Sphere_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Sphere_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_s_l_grid_m_p2_8_h" kindref="compound">SLGridMP2.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_spherical_basis_8_h" kindref="compound">SphericalBasis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="_sphere_8_h_1ae7aad8a2e9c295a94ae01ec5ec2f35b8" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;SLGridSph&gt;<sp/><ref refid="_sphere_8_h_1ae7aad8a2e9c295a94ae01ec5ec2f35b8" kindref="member">SLGridSphPtr</ref>;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaUtil.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_sphere" kindref="compound">Sphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis" kindref="compound">SphericalBasis</ref><sp/></highlight></codeline>
-<codeline lineno="48"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_sphere_8_h_1ae7aad8a2e9c295a94ae01ec5ec2f35b8" kindref="member">SLGridSphPtr</ref><sp/><ref refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" kindref="member">ortho</ref>;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_sphere_1aba7d59251bc70b4b2f45271025f285ff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1aba7d59251bc70b4b2f45271025f285ff" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_sphere_1a8c6a7bce9e2621c37ae76e1f863fa80c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a8c6a7bce9e2621c37ae76e1f863fa80c" kindref="member">get_dpotl</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>dp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_sphere_1a652173e111f6605982c6adbc65f32293" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a652173e111f6605982c6adbc65f32293" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_sphere_1aa6bfd72abb2e011e94585977ea2b3350" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1aa6bfd72abb2e011e94585977ea2b3350" kindref="member">mapIntrp</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::map&lt;double,<sp/>double&gt;<sp/>&amp;data,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="61" refid="class_sphere_1a440de5d82772eccff93c7b86d3598a7b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a440de5d82772eccff93c7b86d3598a7b" kindref="member">mapDeriv</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::map&lt;double,<sp/>double&gt;<sp/>&amp;data,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_sphere_1a89f73c9ad44a2eb0522626631034e052" kindref="member">plummer</ref>)<sp/><ref refid="class_sphere_1ab444f846661c7e7113ca1cf21f0cc4ce" kindref="member">make_model_plummer</ref>();</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_sphere_1a21810f9c6a9dd31ec9b119e6bccfc453" kindref="member">make_model_bin</ref>();</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="68" refid="class_sphere_1a21810f9c6a9dd31ec9b119e6bccfc453" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a21810f9c6a9dd31ec9b119e6bccfc453" kindref="member">make_model_bin</ref>();</highlight></codeline>
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-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>()</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" kindref="member">ortho</ref>-&gt;initialize_cuda(cuInterpArray,<sp/>tex);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" kindref="member">ortho</ref>-&gt;getCudaMappingConstants();</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_sphere_1ac5738f6eed896da5c7c53d463decdf00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1ac5738f6eed896da5c7c53d463decdf00" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_sphere_1a2c795a70918899c354bb33176957103f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a2c795a70918899c354bb33176957103f" kindref="member">get_potl_dens</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>d,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="99" refid="class_sphere_1a5fe02164759ca90df854c1fced09444d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a5fe02164759ca90df854c1fced09444d" kindref="member">model_file</ref>;</highlight></codeline>
-<codeline lineno="100" refid="class_sphere_1a4be924f21c7dc76a1ebc008da7ab3035" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a4be924f21c7dc76a1ebc008da7ab3035" kindref="member">cache_file</ref>;</highlight></codeline>
-<codeline lineno="101" refid="class_sphere_1a28294bdd15c2bc06642281e4d2113983" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_sphere_1a28294bdd15c2bc06642281e4d2113983" kindref="member">recompute</ref>;</highlight></codeline>
-<codeline lineno="102" refid="class_sphere_1a89f73c9ad44a2eb0522626631034e052" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_sphere_1a89f73c9ad44a2eb0522626631034e052" kindref="member">plummer</ref>;</highlight></codeline>
-<codeline lineno="103" refid="class_sphere_1ac3492a52339889ef2ce0357bdbc5ecc9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_sphere_1ac3492a52339889ef2ce0357bdbc5ecc9" kindref="member">logr</ref>;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="class_sphere_1a69e5f2cb1fe98554c8ed7b1b9ed28f79" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_sphere_1a69e5f2cb1fe98554c8ed7b1b9ed28f79" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="class_sphere_1a60b2648f82fede09d60f0bc36bc4cd96" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a60b2648f82fede09d60f0bc36bc4cd96" kindref="member">r_to_xi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" kindref="member">ortho</ref>-&gt;r_to_xi(r);<sp/>}</highlight></codeline>
-<codeline lineno="111" refid="class_sphere_1a6699301c6969c5499ddf669f7f4fbffc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a6699301c6969c5499ddf669f7f4fbffc" kindref="member">xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" kindref="member">ortho</ref>-&gt;xi_to_r(x);<sp/>}</highlight></codeline>
-<codeline lineno="112" refid="class_sphere_1a5f0f6e819b476dfa29d1dad5b267a14a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a5f0f6e819b476dfa29d1dad5b267a14a" kindref="member">d_r_to_xi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/<ref refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" kindref="member">ortho</ref>-&gt;d_xi_to_r(<ref refid="class_sphere_1a60b2648f82fede09d60f0bc36bc4cd96" kindref="member">r_to_xi</ref>(r));<sp/>}</highlight></codeline>
-<codeline lineno="113" refid="class_sphere_1a2c3b6d03a4ba8aa60b2eff871ead655b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a2c3b6d03a4ba8aa60b2eff871ead655b" kindref="member">d_xi_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" kindref="member">ortho</ref>-&gt;d_xi_to_r(x);<sp/>}</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Global<sp/>parameters</highlight></codeline>
-<codeline lineno="133" refid="class_sphere_1aa23162c4c21959d46257a150931e2f56" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sphere_1aa23162c4c21959d46257a150931e2f56" kindref="member">Sphere</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>,<sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref>*<sp/>m=0);</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136" refid="class_sphere_1acde2697064cbc2c64ea34aed1b3efac7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1acde2697064cbc2c64ea34aed1b3efac7" kindref="member">~Sphere</ref>();</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139" refid="class_sphere_1a6d9c19cd5b655fb7e47fdbb680fe3e25" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_1a6d9c19cd5b655fb7e47fdbb680fe3e25" kindref="member">determine_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_sphere_1a28294bdd15c2bc06642281e4d2113983" kindref="member">recompute</ref><sp/>and<sp/><ref refid="global_8_h_1aee2e12c455ac1712da2b8c5a7eadb147" kindref="member">tnow</ref><sp/>&gt;=<sp/><ref refid="class_sphere_1a598ccc4dc3fe0818aedba36666be68d8" kindref="member">tnext</ref>)<sp/><ref refid="class_sphere_1a08f150878ea2e0a03f1417eb07e90c8d" kindref="member">make_model</ref>();</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_spherical_basis_1a91e8b02d7a7482ba2dd12cbae311533c" kindref="member">SphericalBasis::determine_coefficients</ref>();</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/Sphere.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_spherical_basis_8_h.xml b/doxyxml/_spherical_basis_8_h.xml
deleted file mode 100644
index cac8ff5..0000000
--- a/doxyxml/_spherical_basis_8_h.xml
+++ /dev/null
@@ -1,523 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_spherical_basis_8_h" kind="file" language="C++">
-    <compoundname>SphericalBasis.H</compoundname>
-    <includes local="no">memory</includes>
-    <includes local="no">random</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">string</includes>
-    <includes local="no">set</includes>
-    <includes refid="_axisymmetric_basis_8_h" local="no">AxisymmetricBasis.H</includes>
-    <includes local="no">Coefficients.H</includes>
-    <includes local="no">config_exp.h</includes>
-    <includes refid="_n_v_t_x_8_h" local="no">NVTX.H</includes>
-    <includes local="no">CoefContainer.H</includes>
-    <includedby refid="_bessel_8_h" local="no">/home/weinberg/Projects/EXP/src/Bessel.H</includedby>
-    <includedby refid="_sphere_8_h" local="no">/home/weinberg/Projects/EXP/src/Sphere.H</includedby>
-    <incdepgraph>
-      <node id="16">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="17">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
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-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
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-      <node id="7">
-        <label>AxisymmetricBasis.H</label>
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-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="21">
-        <label>NVTX.H</label>
-        <link refid="_n_v_t_x_8_h"/>
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-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
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-        </childnode>
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-        <label>CoefContainer.H</label>
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-        <label>Coefficients.H</label>
-      </node>
-      <node id="19">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="15">
-        <label>Particle.H</label>
-      </node>
-      <node id="11">
-        <label>chrono</label>
-      </node>
-      <node id="18">
-        <label>config_exp.h</label>
-      </node>
-      <node id="10">
-        <label>cstdlib</label>
-      </node>
-      <node id="12">
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-      </node>
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-        <label>map</label>
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-        <label>string</label>
-      </node>
-      <node id="4">
-        <label>vector</label>
-      </node>
-      <node id="14">
-        <label>yaml-cpp/yaml.h</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/src/Bessel.H</label>
-        <link refid="_bessel_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/Sphere.H</label>
-        <link refid="_sphere_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/SphericalBasis.H</label>
-        <link refid="_spherical_basis_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_spherical_basis" prot="public">SphericalBasis</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_SphericalBasis_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_SphericalBasis_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;random&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;set&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_axisymmetric_basis_8_h" kindref="compound">AxisymmetricBasis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Coefficients.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaParticle.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaMappingConstants.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_n_v_t_x_8_h" kindref="compound">NVTX.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;CoefContainer.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="comment">//<sp/>This<sp/>prints<sp/>out<sp/>the<sp/>level<sp/>switch<sp/>matrix.<sp/><sp/>For<sp/>deep<sp/>debugging<sp/>only.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="comment">//<sp/>#define<sp/>SPH_UPDATE_TABLE</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref>;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_spherical_basis" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_spherical_basis" kindref="compound">SphericalBasis</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis" kindref="compound">AxisymmetricBasis</ref></highlight></codeline>
-<codeline lineno="30"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_spherical_basis_1a79dc94b3d9151be5c82758e785f27102" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_spherical_basis_1a79dc94b3d9151be5c82758e785f27102" kindref="member">krnl</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_spherical_basis_1a3c3e727fad925e72690bb0dbd39a2676" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_spherical_basis_1a3c3e727fad925e72690bb0dbd39a2676" kindref="member">u</ref>;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_spherical_basis_1a91d743a30554403f62492950613bea5b" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_spherical_basis_1a91d743a30554403f62492950613bea5b" kindref="member">du</ref>;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_spherical_basis_1a843909b7df76df454ca77ca502e05065" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_spherical_basis_1a843909b7df76df454ca77ca502e05065" kindref="member">potd</ref>;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_spherical_basis_1aa1ad955dd550cd637a32cc11cccc3100" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_spherical_basis_1aa1ad955dd550cd637a32cc11cccc3100" kindref="member">dpot</ref>;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_spherical_basis_1a172c954d497270d8bb6561367b990b5d" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_spherical_basis_1a172c954d497270d8bb6561367b990b5d" kindref="member">legs</ref>;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_spherical_basis_1aff89452a2ddcef22eb9333b5c04df0ef" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_spherical_basis_1aff89452a2ddcef22eb9333b5c04df0ef" kindref="member">dlegs</ref>;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_spherical_basis_1a4927dfcbaf0910033fcc37a4892f8bde" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_spherical_basis_1a4927dfcbaf0910033fcc37a4892f8bde" kindref="member">VectorXdP</ref>;</highlight></codeline>
-<codeline lineno="59" refid="class_spherical_basis_1a678f0fd3cf6338763c2acd325a3e3b18" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;VectorXdP&gt;&gt;<sp/><ref refid="class_spherical_basis_1a678f0fd3cf6338763c2acd325a3e3b18" kindref="member">expcoef0</ref>;</highlight></codeline>
-<codeline lineno="61"></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_spherical_basis_1aee6466e0b29f8c1f9c4df8baa0e607d6" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_spherical_basis_1aee6466e0b29f8c1f9c4df8baa0e607d6" kindref="member">muse1</ref>;</highlight></codeline>
-<codeline lineno="65" refid="class_spherical_basis_1a5d72272244c58109d29a4d3e03f51ce9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a5d72272244c58109d29a4d3e03f51ce9" kindref="member">muse0</ref>;</highlight></codeline>
-<codeline lineno="67"></codeline>
-<codeline lineno="69" refid="class_spherical_basis_1ab5d753ab8f0ddfb814fe73a027af323d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ab5d753ab8f0ddfb814fe73a027af323d" kindref="member">resetT</ref>;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_spherical_basis_1a843a19b3a3dc282c24cd1a6e19aab3ca" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_spherical_basis_1a843a19b3a3dc282c24cd1a6e19aab3ca" kindref="member">cosm</ref>;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_spherical_basis_1a01e5435d45829ea1fa2a7eaa94ca967a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_spherical_basis_1a01e5435d45829ea1fa2a7eaa94ca967a" kindref="member">sinm</ref>;</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="class_spherical_basis_1a3cfea1dc5ab6ba11187c8ce618f4bd22" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_spherical_basis_1a3cfea1dc5ab6ba11187c8ce618f4bd22" kindref="member">dend</ref>;</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81" refid="class_spherical_basis_1a39e31915305ef9daa6b39d3c5cbd9dad" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_spherical_basis_1a39e31915305ef9daa6b39d3c5cbd9dad" kindref="member">factorial</ref>;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_spherical_basis_1a33f78daf1c5dcf5ac4d327662963b1a5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a33f78daf1c5dcf5ac4d327662963b1a5" kindref="member">initialize</ref>();</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_spherical_basis_1a1fb812ef3e4559b795aa1407ceaa6079" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a1fb812ef3e4559b795aa1407ceaa6079" kindref="member">check_range</ref>();</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90" refid="class_spherical_basis_1aa6cc607bac98ab8abef4c46a6a06fee2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aa6cc607bac98ab8abef4c46a6a06fee2" kindref="member">setup</ref>();</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_spherical_basis_1ab38a879d817874f75e324347afe33cb6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ab38a879d817874f75e324347afe33cb6" kindref="member">get_pot_coefs</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>coef,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dp);</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="97" refid="class_spherical_basis_1a590da9389de7deca03880fc5b1c6e3a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a590da9389de7deca03880fc5b1c6e3a4" kindref="member">get_pot_coefs_safe</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>coef,</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dp,</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/>potd1,<sp/>Eigen::MatrixXd&amp;<sp/>dpot1);</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_spherical_basis_1ababeb377d9cc8f3150b3dac614fed0bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ababeb377d9cc8f3150b3dac614fed0bb" kindref="member">get_dens_coefs</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/>Eigen::VectorXd&amp;<sp/>coef,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>p);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_spherical_basis_1aef3567656d31d9a8d694f015e0ff87fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aef3567656d31d9a8d694f015e0ff87fe" kindref="member">firstime_coef</ref>;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_spherical_basis_1a31522511eefb3602a9201dd0d3fd3bb8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a31522511eefb3602a9201dd0d3fd3bb8" kindref="member">firstime_accel</ref>;</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_spherical_basis_1a7ad9fad36d8b7074c7b47d0126ca26ef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_spherical_basis_1a7ad9fad36d8b7074c7b47d0126ca26ef" kindref="member">determine_coefficients_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_spherical_basis_1af9309f6e0f2eb72d4e3c046a15634a70" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1af9309f6e0f2eb72d4e3c046a15634a70" kindref="member">determine_coefficients_particles</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117" refid="class_spherical_basis_1a100361ca78665ea58fb37f141f98bf07" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a100361ca78665ea58fb37f141f98bf07" kindref="member">determine_coefficients_playback</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120"><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_coefficients_cuda(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>compute_pca);</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>determine_acceleration_cuda();</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>multistep_update_cuda();</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/>thrust::host_vector&lt;cuFP_t&gt;<sp/>host_coefs,<sp/>host_massT;</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dev_coefs;</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/>cuFP_t<sp/>host_mass_tot;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>HtoD_coefs(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;VectorXdP&gt;&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>DtoH_coefs(std::vector&lt;VectorXdP&gt;&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>coef_cuda_compare();</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/>std::vector&lt;cudaArray_t&gt;<sp/>cuInterpArray;</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/>thrust::host_vector&lt;cudaTextureObject_t&gt;<sp/>tex;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"></highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>destroy_cuda();</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>cudaMappingConstants<sp/>getCudaMappingConstants()</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/>cudaMappingConstants<sp/>ret;</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.rscale<sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.hscale<sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmin<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.xmax<sp/><sp/><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymin<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.ymax<sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numr<sp/><sp/><sp/>=<sp/>100;</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numx<sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.numy<sp/><sp/><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dxi<sp/><sp/><sp/><sp/>=<sp/>1.0/(ret.numr-1);</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.dxi<sp/><sp/><sp/><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/>ret.cmapR<sp/><sp/>=<sp/>1;</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>initialize_mapping_constants();</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>host_dev_force_compare();</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/>thrust::device_vector&lt;cudaTextureObject_t&gt;<sp/>t_d;</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal">cudaStorage</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dN_coef;</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dc_coef;</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dw_coef;</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>df_coef;</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dN_tvar;</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dW_tvar;</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dc_tvar;</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>dw_tvar;</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>df_tvar;</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;cuFP_t&gt;<sp/>plm1_d,<sp/>plm2_d,<sp/>r_d,<sp/>m_d,<sp/>u_d,<sp/>a_d,<sp/>p_d;</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/>thrust::device_vector&lt;int<sp/><sp/><sp/>&gt;<sp/>i_d;</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;thrust::device_vector&lt;cuFP_t&gt;&gt;<sp/>T_covr;</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"></highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>resize_coefs(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>gridSize,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>stride,</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sampT,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>pca,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>pcaeof,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>subsamp);</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>resize_acc<sp/><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Nthread);</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/>cudaStorage<sp/>cuS;</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>initialize_cuda_sph;</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_initialize();</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"></highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>cuda_zero_coefs();</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="207"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211" refid="class_spherical_basis_1a2c45c3e7a097ab190a77f882dac5c2c2" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;unsigned&gt;&gt;<sp/><ref refid="class_spherical_basis_1a2c45c3e7a097ab190a77f882dac5c2c2" kindref="member">occt</ref>;</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight></codeline>
-<codeline lineno="214" refid="class_spherical_basis_1a7db3a78056025d8c840dd22bae0b2692" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a7db3a78056025d8c840dd22bae0b2692" kindref="member">occt_output</ref>();</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="217" refid="class_spherical_basis_1a45f237bae8eb688588b95f8a0522b10d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_spherical_basis_1a45f237bae8eb688588b95f8a0522b10d" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220" refid="class_spherical_basis_1ac6d657e39329e543766a4503f25d3a37" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ac6d657e39329e543766a4503f25d3a37" kindref="member">compute_rms_coefs</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"></highlight></codeline>
-<codeline lineno="223" refid="class_spherical_basis_1aeee5549cb30e7c608c8255783ab10a52" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aeee5549cb30e7c608c8255783ab10a52" kindref="member">update_noise</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="224" refid="class_spherical_basis_1ad9ea2d324f62151073b6cb3b4da9f28a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ad9ea2d324f62151073b6cb3b4da9f28a" kindref="member">setup_noise</ref>;</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters</highlight></codeline>
-<codeline lineno="227" refid="class_spherical_basis_1a1eda652331347885bac46d659ae02b8d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a1eda652331347885bac46d659ae02b8d" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"></highlight></codeline>
-<codeline lineno="230" refid="class_spherical_basis_1a498d5da25a19e0eaf75cb539fcda5227" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a498d5da25a19e0eaf75cb539fcda5227" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233" refid="class_spherical_basis_1a8a21a2f59849e53f52c532be168a5800" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a8a21a2f59849e53f52c532be168a5800" kindref="member">self_consistent</ref>;</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight></codeline>
-<codeline lineno="236" refid="class_spherical_basis_1a67a78c946ad3a87bafd4be8ea267f266" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a67a78c946ad3a87bafd4be8ea267f266" kindref="member">NO_L0</ref>;</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight></codeline>
-<codeline lineno="239" refid="class_spherical_basis_1ae51f8f0ffc23b5826245038719998eb6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ae51f8f0ffc23b5826245038719998eb6" kindref="member">NO_L1</ref>;</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="242" refid="class_spherical_basis_1a68de61b1e9ba7549723513791436e087" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a68de61b1e9ba7549723513791436e087" kindref="member">EVEN_L</ref>;</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="245" refid="class_spherical_basis_1acb6cedabe692304779492aaea2efb698" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1acb6cedabe692304779492aaea2efb698" kindref="member">EVEN_M</ref>;</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"></highlight></codeline>
-<codeline lineno="248" refid="class_spherical_basis_1a463dfd0a4b7a6f16a7a814e887dce037" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a463dfd0a4b7a6f16a7a814e887dce037" kindref="member">M0_only</ref>;</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"></highlight></codeline>
-<codeline lineno="251" refid="class_spherical_basis_1a27229561fbae3c1f7bf416933767a494" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a27229561fbae3c1f7bf416933767a494" kindref="member">NOISE</ref>;<sp/><sp/></highlight></codeline>
-<codeline lineno="252"><highlight class="normal"></highlight></codeline>
-<codeline lineno="254" refid="class_spherical_basis_1af4a0835e95c0e0f5406977a92c11ed6f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1af4a0835e95c0e0f5406977a92c11ed6f" kindref="member">noiseN</ref>;</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"></highlight></codeline>
-<codeline lineno="257" refid="class_spherical_basis_1a3cbbfe1042e83cf11ab096ec01b5a518" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a3cbbfe1042e83cf11ab096ec01b5a518" kindref="member">noise_model_file</ref>;</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"></highlight></codeline>
-<codeline lineno="260" refid="class_spherical_basis_1ae90709b119fc3f5df1c76abb8145bee8" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_spherical_basis_1ae90709b119fc3f5df1c76abb8145bee8" kindref="member">meanC</ref>;</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"></highlight></codeline>
-<codeline lineno="263" refid="class_spherical_basis_1a89d96243aa9a5c5932555116a3ce59e9" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_spherical_basis_1a89d96243aa9a5c5932555116a3ce59e9" kindref="member">rmsC</ref>;</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="267" refid="class_spherical_basis_1a73e589dd6b66a1a015e065d34021f525" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a73e589dd6b66a1a015e065d34021f525" kindref="member">seedN</ref>;</highlight></codeline>
-<codeline lineno="268" refid="class_spherical_basis_1a99942ed4bb5830034724f7f32c284cea" refkind="member"><highlight class="normal"><sp/><sp/>std::mt19937<sp/><ref refid="class_spherical_basis_1a99942ed4bb5830034724f7f32c284cea" kindref="member">rgen</ref>;</highlight></codeline>
-<codeline lineno="269" refid="class_spherical_basis_1a64ddd550a0b2994a5800a064883814e6" refkind="member"><highlight class="normal"><sp/><sp/>std::normal_distribution&lt;&gt;<sp/><ref refid="class_spherical_basis_1a64ddd550a0b2994a5800a064883814e6" kindref="member">nrand</ref>;</highlight></codeline>
-<codeline lineno="271"></codeline>
-<codeline lineno="273" refid="class_spherical_basis_1aa69f1ee5a2a5ab8269b4cd0b97aa274a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aa69f1ee5a2a5ab8269b4cd0b97aa274a" kindref="member">ssfrac</ref>;</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"></highlight></codeline>
-<codeline lineno="276" refid="class_spherical_basis_1ac8ace6001c8d041fb39f13cb27b2ca19" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ac8ace6001c8d041fb39f13cb27b2ca19" kindref="member">subset</ref>;</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"></highlight></codeline>
-<codeline lineno="282" refid="class_spherical_basis_1ac6b350512a9ae518f4c8cbecb4a46593" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ac6b350512a9ae518f4c8cbecb4a46593" kindref="member">compute_multistep_coefficients</ref>();</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"></highlight></codeline>
-<codeline lineno="285"></codeline>
-<codeline lineno="286" refid="class_spherical_basis_1acf7e4a3d55ca7d250a2b814bd95321ba" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/>&gt;<sp/><ref refid="class_spherical_basis_1acf7e4a3d55ca7d250a2b814bd95321ba" kindref="member">differ1</ref>;</highlight></codeline>
-<codeline lineno="287" refid="class_spherical_basis_1aa78ad9fca6de2d329ffc43522b1f067c" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;<sp/>double<sp/>&gt;<sp/><ref refid="class_spherical_basis_1aa78ad9fca6de2d329ffc43522b1f067c" kindref="member">pack</ref>,<sp/><ref refid="class_spherical_basis_1adb25dced63b1f56d205dd7d8e659f0ef" kindref="member">unpack</ref>;</highlight></codeline>
-<codeline lineno="289"></codeline>
-<codeline lineno="293" refid="class_spherical_basis_1a34866d25c28ce00edf20be346f43361f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a34866d25c28ce00edf20be346f43361f" kindref="member">dump_coefs_all</ref>(ostream<sp/>&amp;);</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"></highlight></codeline>
-<codeline lineno="296" refid="class_spherical_basis_1aac8c95f365acb42630d38d2b8a2c79f4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aac8c95f365acb42630d38d2b8a2c79f4" kindref="member">cmagic</ref><sp/>=<sp/>0xc0a57a2;</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299" refid="class_spherical_basis_1af0c80585c72228373e886563448ba6e2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref><sp/>*<ref refid="class_spherical_basis_1af0c80585c72228373e886563448ba6e2" kindref="member">mix</ref>;</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"></highlight></codeline>
-<codeline lineno="304" refid="class_spherical_basis_1a4c8c57602fd3b7eb58c08c35c2964f90" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;CoefClasses::SphCoefs&gt;<sp/><ref refid="class_spherical_basis_1a4c8c57602fd3b7eb58c08c35c2964f90" kindref="member">playback</ref>;</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"></highlight></codeline>
-<codeline lineno="312" refid="class_spherical_basis_1a27cb5e14065b26a1eaf8fecde6210db9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a27cb5e14065b26a1eaf8fecde6210db9" kindref="member">coefMaster</ref>;</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"></highlight></codeline>
-<codeline lineno="315" refid="class_spherical_basis_1aa594052066fda40758b8e4757fbab0aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aa594052066fda40758b8e4757fbab0aa" kindref="member">lastPlayTime</ref>;</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"></highlight></codeline>
-<codeline lineno="318" refid="class_spherical_basis_1a985aeb555ac7cadb48ada5aa0b87a0a4" refkind="member"><highlight class="normal"><sp/><sp/>CoefClasses::SphCoefs<sp/><ref refid="class_spherical_basis_1a985aeb555ac7cadb48ada5aa0b87a0a4" kindref="member">sphCoefs</ref>;</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"></highlight></codeline>
-<codeline lineno="321" refid="class_spherical_basis_1ad5c34eae92d36d7460c39c6f2c73fd27" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;<sp/><ref refid="class_spherical_basis_1ad5c34eae92d36d7460c39c6f2c73fd27" kindref="member">valid_keys</ref>;</highlight></codeline>
-<codeline lineno="322"><highlight class="normal"></highlight></codeline>
-<codeline lineno="324"><highlight class="normal"></highlight></codeline>
-<codeline lineno="325" refid="class_spherical_basis_1ad1b2e558ad5f084a43d5368e86910763" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ad1b2e558ad5f084a43d5368e86910763" kindref="member">r_to_xi</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;<sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="326" refid="class_spherical_basis_1a84edfe45c66d8221046d65aa63d19f8a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a84edfe45c66d8221046d65aa63d19f8a" kindref="member">xi_to_r</ref><sp/><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>x;<sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="327" refid="class_spherical_basis_1a8371f1f235cbd49dbf0bd89541d8fdaf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a8371f1f235cbd49dbf0bd89541d8fdaf" kindref="member">d_r_to_xi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="329"></codeline>
-<codeline lineno="331"><highlight class="normal"></highlight></codeline>
-<codeline lineno="335" refid="class_spherical_basis_1a69a29f7fd957e20aebe7797ba7f266bf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a69a29f7fd957e20aebe7797ba7f266bf" kindref="member">ortho_check</ref>;</highlight></codeline>
-<codeline lineno="336" refid="class_spherical_basis_1a1066050b6ba526768710115eced4144f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a1066050b6ba526768710115eced4144f" kindref="member">biorthogonality_check</ref>();</highlight></codeline>
-<codeline lineno="338"><highlight class="normal"></highlight></codeline>
-<codeline lineno="339"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="340"><highlight class="normal"></highlight></codeline>
-<codeline lineno="342" refid="class_spherical_basis_1a3a81bde48ab3654d1dbe004efcd06782" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a3a81bde48ab3654d1dbe004efcd06782" kindref="member">NewCoefs</ref>;</highlight></codeline>
-<codeline lineno="343"><highlight class="normal"></highlight></codeline>
-<codeline lineno="345" refid="class_spherical_basis_1a597c70fc53eab8ec04f7ab86c04fec42" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_basis_1a597c70fc53eab8ec04f7ab86c04fec42" kindref="member">SphericalBasis</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>,<sp/><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref><sp/>*m=0);</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"></highlight></codeline>
-<codeline lineno="348" refid="class_spherical_basis_1a37942ed713092a019dbc750b2c44c2d7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_basis_1a37942ed713092a019dbc750b2c44c2d7" kindref="member">SphericalBasis</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis" kindref="compound">SphericalBasis</ref>&amp;<sp/>p);</highlight></codeline>
-<codeline lineno="349"><highlight class="normal"></highlight></codeline>
-<codeline lineno="351" refid="class_spherical_basis_1aa752534f77e17674a6a99da2549af843" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aa752534f77e17674a6a99da2549af843" kindref="member">~SphericalBasis</ref>();</highlight></codeline>
-<codeline lineno="352"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="354"><highlight class="normal"></highlight></codeline>
-<codeline lineno="355" refid="class_spherical_basis_1a05f775f3bae56543829492fae9a0b75f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a05f775f3bae56543829492fae9a0b75f" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/><ref refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" kindref="member">cC</ref>);</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"></highlight></codeline>
-<codeline lineno="358"><highlight class="normal"></highlight></codeline>
-<codeline lineno="359" refid="class_spherical_basis_1a91e8b02d7a7482ba2dd12cbae311533c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a91e8b02d7a7482ba2dd12cbae311533c" kindref="member">determine_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="360"><highlight class="normal"></highlight></codeline>
-<codeline lineno="362" refid="class_spherical_basis_1a8ff7907cd7af5f79b63f11282c277cb2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a8ff7907cd7af5f79b63f11282c277cb2" kindref="member">determine_coefficients</ref>(<ref refid="class_component" kindref="compound">Component</ref><sp/>*c)<sp/></highlight></codeline>
-<codeline lineno="363"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" kindref="member">cC</ref><sp/>=<sp/>c;<sp/><ref refid="class_spherical_basis_1a91e8b02d7a7482ba2dd12cbae311533c" kindref="member">determine_coefficients</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="364"><highlight class="normal"></highlight></codeline>
-<codeline lineno="366"><highlight class="normal"></highlight></codeline>
-<codeline lineno="367" refid="class_spherical_basis_1a73773546d4e45c0ac442a9853ef42225" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a73773546d4e45c0ac442a9853ef42225" kindref="member">determine_acceleration_and_potential</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="368"><highlight class="normal"></highlight></codeline>
-<codeline lineno="374" refid="class_spherical_basis_1aef978544ce5d90a116759fd3a87a8634" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aef978544ce5d90a116759fd3a87a8634" kindref="member">multistep_reset</ref>();</highlight></codeline>
-<codeline lineno="375" refid="class_spherical_basis_1af2393d23ec465c58280cc952a92c6fa8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1af2393d23ec465c58280cc952a92c6fa8" kindref="member">multistep_update_begin</ref>();</highlight></codeline>
-<codeline lineno="376" refid="class_spherical_basis_1a92c55df02156ac2f3633bfa950eb795b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a92c55df02156ac2f3633bfa950eb795b" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>next,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="377" refid="class_spherical_basis_1a50f766814b5eb9fd2d3922da477c16e5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a50f766814b5eb9fd2d3922da477c16e5" kindref="member">multistep_update_finish</ref>();</highlight></codeline>
-<codeline lineno="378" refid="class_spherical_basis_1af0aaa7a1ef27c5ccb866190e5cefd90a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1af0aaa7a1ef27c5ccb866190e5cefd90a" kindref="member">multistep_add_debug</ref></highlight></codeline>
-<codeline lineno="379"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::vector&lt;std::pair&lt;unsigned,<sp/>unsigned&gt;&gt;&gt;&amp;<sp/>data)</highlight></codeline>
-<codeline lineno="380"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i=0;<sp/>i&lt;<ref refid="class_spherical_basis_1a2c45c3e7a097ab190a77f882dac5c2c2" kindref="member">occt</ref>.size();<sp/>i++)<sp/>{</highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;<ref refid="class_spherical_basis_1a2c45c3e7a097ab190a77f882dac5c2c2" kindref="member">occt</ref>[i].size();<sp/>j++)</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_spherical_basis_1a2c45c3e7a097ab190a77f882dac5c2c2" kindref="member">occt</ref>[i][j]<sp/>+=<sp/>data[i][j].second<sp/>-<sp/>data[i][j].first;</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="385"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="387"></codeline>
-<codeline lineno="399"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="400" refid="class_spherical_basis_1ac3eafe5175c669b7b7b86932c764af32" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ac3eafe5175c669b7b7b86932c764af32" kindref="member">get_dpotl</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>dp,<sp/></highlight></codeline>
-<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"></highlight></codeline>
-<codeline lineno="412"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="413" refid="class_spherical_basis_1a63cdde991a10a6309a97e3af6b5833b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a63cdde991a10a6309a97e3af6b5833b3" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::MatrixXd&amp;<sp/>p,</highlight></codeline>
-<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="415"><highlight class="normal"></highlight></codeline>
-<codeline lineno="425"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="426" refid="class_spherical_basis_1a0e2377c1cdc1335562343e01e4dee7cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a0e2377c1cdc1335562343e01e4dee7cd" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::MatrixXd&amp;<sp/>d,</highlight></codeline>
-<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="428"><highlight class="normal"></highlight></codeline>
-<codeline lineno="440"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="441" refid="class_spherical_basis_1a2823c30f130d1a33768cce788b05c34e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a2823c30f130d1a33768cce788b05c34e" kindref="member">get_potl_dens</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::MatrixXd&amp;<sp/>p,<sp/>Eigen::MatrixXd&amp;<sp/>d,</highlight></codeline>
-<codeline lineno="442"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tid)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="443"><highlight class="normal"></highlight></codeline>
-<codeline lineno="445" refid="class_spherical_basis_1a84fc725d4e62f743a3846b8b5908a42e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><ref refid="class_spherical_basis_1a84fc725d4e62f743a3846b8b5908a42e" kindref="member">determine_fields_at_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,</highlight></codeline>
-<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="448"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotx,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpoty,<sp/></highlight></codeline>
-<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz);</highlight></codeline>
-<codeline lineno="450"><highlight class="normal"></highlight></codeline>
-<codeline lineno="452" refid="class_spherical_basis_1ab139a46a2cc6813b375b041dbe3b6498" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ab139a46a2cc6813b375b041dbe3b6498" kindref="member">determine_fields_at_point_sph</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>theta,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="453"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="454"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="455"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpott,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp);</highlight></codeline>
-<codeline lineno="456"><highlight class="normal"></highlight></codeline>
-<codeline lineno="457"><highlight class="normal"></highlight></codeline>
-<codeline lineno="459" refid="class_spherical_basis_1ab11fe59ba8d3a8e251ea96e72d93b654" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ab11fe59ba8d3a8e251ea96e72d93b654" kindref="member">determine_fields_at_point_cyl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="460"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl0,<sp/></highlight></codeline>
-<codeline lineno="461"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="462"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotz,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp);</highlight></codeline>
-<codeline lineno="463"><highlight class="normal"></highlight></codeline>
-<codeline lineno="464"><highlight class="normal"></highlight></codeline>
-<codeline lineno="466" refid="class_spherical_basis_1ad436a9e7fe4b8dca580322b59dd1b9fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1ad436a9e7fe4b8dca580322b59dd1b9fe" kindref="member">norm</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="467"><highlight class="normal"></highlight></codeline>
-<codeline lineno="469" refid="class_spherical_basis_1a601c0bfd766bc3de1f4983430b110663" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a601c0bfd766bc3de1f4983430b110663" kindref="member">knl</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="470"><highlight class="normal"></highlight></codeline>
-<codeline lineno="472" refid="class_spherical_basis_1a518203f6db28e171c7dccd04611994b5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1a518203f6db28e171c7dccd04611994b5" kindref="member">dump_coefs</ref>(ostream<sp/>&amp;);</highlight></codeline>
-<codeline lineno="473"><highlight class="normal"></highlight></codeline>
-<codeline lineno="475" refid="class_spherical_basis_1aababccfd0ab296c683963963caead0be" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_basis_1aababccfd0ab296c683963963caead0be" kindref="member">dump_coefs_h5</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="476"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="477"><highlight class="normal"></highlight></codeline>
-<codeline lineno="478"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_spherical_s_l_8_h.xml b/doxyxml/_spherical_s_l_8_h.xml
deleted file mode 100644
index 1b0d7c6..0000000
--- a/doxyxml/_spherical_s_l_8_h.xml
+++ /dev/null
@@ -1,383 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_spherical_s_l_8_h" kind="file" language="C++">
-    <compoundname>SphericalSL.H</compoundname>
-    <includes local="no">vector</includes>
-    <includes local="no">Particle.H</includes>
-    <includes refid="_s_l_grid_m_p2_8_h" local="no">SLGridMP2.H</includes>
-    <includedby refid="_disk2d_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</includedby>
-    <includedby refid="_disk_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</includedby>
-    <incdepgraph>
-      <node id="27">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="26">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
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-    <innerclass refid="class_spherical_s_l" prot="public">SphericalSL</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" prot="public" static="no">
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-        <definition>typedef std::shared_ptr&lt;SphericalSL&gt; SphericalSLptr</definition>
-        <argsstring></argsstring>
-        <name>SphericalSLptr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="119" column="25" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="119" bodyend="-1"/>
-      </memberdef>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_SphericalSL_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_SphericalSL_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Particle.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Particle.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_s_l_grid_m_p2_8_h" kindref="compound">SLGridMP2.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="class_spherical_s_l" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_spherical_s_l" kindref="compound">SphericalSL</ref></highlight></codeline>
-<codeline lineno="11"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="13" refid="class_spherical_s_l_1a813ecd95654c1fec10522b17108c547c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a7deb9d187d3443d8369f7d3bd8bb75f5" kindref="member">NMAX</ref>,<sp/><ref refid="class_spherical_s_l_1a813ecd95654c1fec10522b17108c547c" kindref="member">LMAX</ref>,<sp/><ref refid="class_spherical_s_l_1a337ba05ab773bbe52e8095004782d740" kindref="member">n</ref>,<sp/><ref refid="class_spherical_s_l_1ad292826d37805ea410dd2e17e1b70892" kindref="member">nthrds</ref>;</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_spherical_s_l_1a8b8f5efd9e0bf448cf4843855c118339" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*<ref refid="class_spherical_s_l_1a8b8f5efd9e0bf448cf4843855c118339" kindref="member">MPIin</ref>,<sp/>*<ref refid="class_spherical_s_l_1a8fbdfaeb7fee4d5aac47c6429047fc1d" kindref="member">MPIout</ref>;</highlight></codeline>
-<codeline lineno="16" refid="class_spherical_s_l_1a013e230e435ec9959468f79d9b5c77d5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a013e230e435ec9959468f79d9b5c77d5" kindref="member">MPIset</ref>;</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_spherical_s_l_1a3a0f08d5dcbebd41912b30fd05978615" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SLGridSph&gt;<sp/><ref refid="class_spherical_s_l_1a3a0f08d5dcbebd41912b30fd05978615" kindref="member">ortho</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_spherical_s_l_1a3fcbe20f703a0654cb7056ab40e9c68e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_spherical_s_l_1a3fcbe20f703a0654cb7056ab40e9c68e" kindref="member">expcoef</ref>;</highlight></codeline>
-<codeline lineno="21" refid="class_spherical_s_l_1ab9c7c5c049db19e357d6631dc70b2b4e" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_spherical_s_l_1ab9c7c5c049db19e357d6631dc70b2b4e" kindref="member">cc</ref>;</highlight></codeline>
-<codeline lineno="22" refid="class_spherical_s_l_1a8f9561d9c836c819a7aa0cabc224e30a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_spherical_s_l_1a8f9561d9c836c819a7aa0cabc224e30a" kindref="member">expcoef1</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_spherical_s_l_1ab9002cf1895d5f730a6568f63a2b6cd0" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt;&gt;<sp/><ref refid="class_spherical_s_l_1ab9002cf1895d5f730a6568f63a2b6cd0" kindref="member">cc1</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="class_spherical_s_l_1a27fc15e71cb01c476f0670cb7d641ceb" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_spherical_s_l_1a27fc15e71cb01c476f0670cb7d641ceb" kindref="member">factorial</ref>;</highlight></codeline>
-<codeline lineno="26" refid="class_spherical_s_l_1ac5d2727ecb38bd38e121521ceda3950b" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_spherical_s_l_1aaf5f7d55c29f067bb5361169bcc85740" kindref="member">normM</ref>,<sp/><ref refid="class_spherical_s_l_1ac5d2727ecb38bd38e121521ceda3950b" kindref="member">krnl</ref>;</highlight></codeline>
-<codeline lineno="27" refid="class_spherical_s_l_1ad5b5e8c93a10b152df15a5f786826b77" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_spherical_s_l_1af33d70542f4d19abd21353a9eebe859e" kindref="member">potd</ref>,<sp/><ref refid="class_spherical_s_l_1af8f9386d6d9563028c44c70aa1771c92" kindref="member">legs</ref>,<sp/><ref refid="class_spherical_s_l_1a56547945a90cae1f265fb9de079613c8" kindref="member">dpot</ref>,<sp/><ref refid="class_spherical_s_l_1ac37848646e23f36da4e63257bcb3e8f1" kindref="member">dlegs</ref>,<sp/><ref refid="class_spherical_s_l_1ad5b5e8c93a10b152df15a5f786826b77" kindref="member">dend</ref>;</highlight></codeline>
-<codeline lineno="28" refid="class_spherical_s_l_1a05cbae75f825817d73162db85d092edd" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_spherical_s_l_1a05cbae75f825817d73162db85d092edd" kindref="member">cosm</ref>,<sp/><ref refid="class_spherical_s_l_1a8e1a0c690edbe2ed7ddc73da6c3b46a7" kindref="member">sinm</ref>;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_spherical_s_l_1af1dec127f0a434f1337d7322a41d84da" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1af1dec127f0a434f1337d7322a41d84da" kindref="member">coefs_made</ref>;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_spherical_s_l_1a5a442bf7b842ca82d1b592ad2e27868b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a5a442bf7b842ca82d1b592ad2e27868b" kindref="member">initialized</ref>;</highlight></codeline>
-<codeline lineno="33" refid="class_spherical_s_l_1af88fdc6e4c4e5120bba8b241cd6b4871" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1af88fdc6e4c4e5120bba8b241cd6b4871" kindref="member">initialize</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_spherical_s_l_1a50e26f96820e4e50de3a58fc64b1c121" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;int&gt;<sp/><ref refid="class_spherical_s_l_1a50e26f96820e4e50de3a58fc64b1c121" kindref="member">use</ref>;</highlight></codeline>
-<codeline lineno="36" refid="class_spherical_s_l_1a9671bd2fff23dd5eaeffb2a27447ef3a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a9671bd2fff23dd5eaeffb2a27447ef3a" kindref="member">compute</ref>,<sp/><ref refid="class_spherical_s_l_1a1d7bd83bd68c5ce84eb0a892246aa47a" kindref="member">used</ref>;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_spherical_s_l_1ad32f5b4b0c55d25aa1b87661e119fd54" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1ad32f5b4b0c55d25aa1b87661e119fd54" kindref="member">compute_coefficients_single</ref>(vector&lt;Particle&gt;<sp/>&amp;part);</highlight></codeline>
-<codeline lineno="40" refid="class_spherical_s_l_1a22b23f361964348db82f0c8347b5b556" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a22b23f361964348db82f0c8347b5b556" kindref="member">compute_coefficients_thread</ref>(vector&lt;Particle&gt;<sp/>&amp;part);</highlight></codeline>
-<codeline lineno="41" refid="class_spherical_s_l_1a6aa4080f08160947a30d4f4f562552e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a6aa4080f08160947a30d4f4f562552e9" kindref="member">compute_coefficients_thread_call</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">,<sp/>vector&lt;Particle&gt;*<sp/>p);</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_spherical_s_l_1ad7d6391dd324af479b0207cf65aacae2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1ad7d6391dd324af479b0207cf65aacae2" kindref="member">parallel_gather_coefficients</ref></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/>(Eigen::MatrixXd&amp;<sp/><ref refid="class_spherical_s_l_1a3fcbe20f703a0654cb7056ab40e9c68e" kindref="member">expcoef</ref>,</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/>Eigen::MatrixXd&amp;<sp/><ref refid="class_spherical_s_l_1a8f9561d9c836c819a7aa0cabc224e30a" kindref="member">expcoef1</ref>,</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;&amp;<sp/><ref refid="class_spherical_s_l_1ab9c7c5c049db19e357d6631dc70b2b4e" kindref="member">cc</ref>,</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;&amp;<sp/><ref refid="class_spherical_s_l_1ab9002cf1895d5f730a6568f63a2b6cd0" kindref="member">cc1</ref>,</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax);</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_spherical_s_l_1a5fe46499b13bfcb98aff146e6ef4cb55" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a5fe46499b13bfcb98aff146e6ef4cb55" kindref="member">parallel_distribute_coefficients</ref>(Eigen::MatrixXd&amp;<sp/><ref refid="class_spherical_s_l_1a3fcbe20f703a0654cb7056ab40e9c68e" kindref="member">expcoef</ref>);</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_spherical_s_l_1af834ba9249aeda0d643843a117c9a3f4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1af834ba9249aeda0d643843a117c9a3f4" kindref="member">pca_hall</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a9671bd2fff23dd5eaeffb2a27447ef3a" kindref="member">compute</ref>,<sp/>Eigen::MatrixXd&amp;<sp/><ref refid="class_spherical_s_l_1a3fcbe20f703a0654cb7056ab40e9c68e" kindref="member">expcoef</ref>,</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;&amp;<sp/><ref refid="class_spherical_s_l_1ab9c7c5c049db19e357d6631dc70b2b4e" kindref="member">cc</ref>,<sp/>Eigen::MatrixXd&amp;<sp/><ref refid="class_spherical_s_l_1aaf5f7d55c29f067bb5361169bcc85740" kindref="member">normM</ref>);</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Error<sp/>function</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57" refid="class_spherical_s_l_1ab0b915995728fb506db35b8072f984d7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1ab0b915995728fb506db35b8072f984d7" kindref="member">bomb</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*s)<sp/>{</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/>cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;SphericalSL<sp/>ERROR:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>s<sp/>&lt;&lt;<sp/></highlight><highlight class="charliteral">&apos;\n&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/>exit(-1);</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Global<sp/>parameters</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_spherical_s_l_1a7c59e8cf62796026dabe7f94a4f8f6e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a7c59e8cf62796026dabe7f94a4f8f6e9" kindref="member">RMIN</ref>;</highlight></codeline>
-<codeline lineno="67" refid="class_spherical_s_l_1a9b19e4bd0217e1205c5c803f482d17a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a9b19e4bd0217e1205c5c803f482d17a4" kindref="member">RMAX</ref>;</highlight></codeline>
-<codeline lineno="68" refid="class_spherical_s_l_1a8b6f0e8798b2229d571a7673876e894f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a8b6f0e8798b2229d571a7673876e894f" kindref="member">NUMR</ref>;</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_spherical_s_l_1afe1ac0cbd9c6d774f1b615544261ba9a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1afe1ac0cbd9c6d774f1b615544261ba9a" kindref="member">selector</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>For<sp/>PCA<sp/>methods</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_spherical_s_l_1a6d56f6cb68eb63243e1d965cbcfc9a4f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a6d56f6cb68eb63243e1d965cbcfc9a4f" kindref="member">tk_type</ref>;</highlight></codeline>
-<codeline lineno="72" refid="class_spherical_s_l_1a6eac202a1c2f07a57ba9ef424c9000e5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a6eac202a1c2f07a57ba9ef424c9000e5" kindref="member">tksmooth</ref>;</highlight></codeline>
-<codeline lineno="73" refid="class_spherical_s_l_1acc7c4f80202d99a49f3a92bc4df9dd23" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1acc7c4f80202d99a49f3a92bc4df9dd23" kindref="member">tkcum</ref>;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Constructors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="class_spherical_s_l_1ad02a12b988ea23d7d0ee2b145b0f6c16" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_s_l_1ad02a12b988ea23d7d0ee2b145b0f6c16" kindref="member">SphericalSL</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="79" refid="class_spherical_s_l_1a6b21bc7ab86f614c405ff272e7499fd5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_s_l_1a6b21bc7ab86f614c405ff272e7499fd5" kindref="member">SphericalSL</ref>(std::string<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Nth,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>CMAP,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>SCALE=1.0);</highlight></codeline>
-<codeline lineno="80" refid="class_spherical_s_l_1a8063a00b42944672b514b17dd5778dd8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_s_l_1a8063a00b42944672b514b17dd5778dd8" kindref="member">~SphericalSL</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_spherical_s_l_1a7fe882934aca4c0492ea73e2cb15ba00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a7fe882934aca4c0492ea73e2cb15ba00" kindref="member">reset</ref>(std::string<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>Nth,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>CMAP,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>SCALE);</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameter<sp/>access</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85" refid="class_spherical_s_l_1a87dd97404e5e86848d52e98987a0602a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a87dd97404e5e86848d52e98987a0602a" kindref="member">get_maxNR</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a7deb9d187d3443d8369f7d3bd8bb75f5" kindref="member">NMAX</ref>;}</highlight></codeline>
-<codeline lineno="86" refid="class_spherical_s_l_1afffc5a86b46b8a0aecd725d8507bd03e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1afffc5a86b46b8a0aecd725d8507bd03e" kindref="member">get_maxNL</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a813ecd95654c1fec10522b17108c547c" kindref="member">LMAX</ref>;}</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Pointer<sp/>to<sp/>orthgonal<sp/>function<sp/>instance</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_spherical_s_l_1ad11a116a7a9158618baec8394f26955d" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SLGridSph&gt;<sp/><ref refid="class_spherical_s_l_1ad11a116a7a9158618baec8394f26955d" kindref="member">SL</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a3a0f08d5dcbebd41912b30fd05978615" kindref="member">ortho</ref>;}</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Main<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_spherical_s_l_1af15a1754fb2db03a205275cbef0c6e60" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1af15a1754fb2db03a205275cbef0c6e60" kindref="member">accumulate</ref>(vector&lt;Particle&gt;&amp;<sp/>particles);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="95" refid="class_spherical_s_l_1a3ea2887e8eaedf357d1b5b0a3f208cd9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a3ea2887e8eaedf357d1b5b0a3f208cd9" kindref="member">determine_fields_at_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>theta,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tdens,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotl,<sp/></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpott,<sp/></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*tpotp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">=0);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101" refid="class_spherical_s_l_1a62e523cfc50426876e2e25c7365204e0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a62e523cfc50426876e2e25c7365204e0" kindref="member">get_potl_dens</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a337ba05ab773bbe52e8095004782d740" kindref="member">n</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">=0)</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_spherical_s_l_1a3a0f08d5dcbebd41912b30fd05978615" kindref="member">ortho</ref>-&gt;get_dens<sp/>(<ref refid="class_spherical_s_l_1ad5b5e8c93a10b152df15a5f786826b77" kindref="member">dend</ref>[</highlight><highlight class="keywordtype">id</highlight><highlight class="normal">],<sp/>r);</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_spherical_s_l_1a3a0f08d5dcbebd41912b30fd05978615" kindref="member">ortho</ref>-&gt;get_pot<sp/><sp/>(<ref refid="class_spherical_s_l_1af33d70542f4d19abd21353a9eebe859e" kindref="member">potd</ref>[</highlight><highlight class="keywordtype">id</highlight><highlight class="normal">],<sp/>r);</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_spherical_s_l_1a3a0f08d5dcbebd41912b30fd05978615" kindref="member">ortho</ref>-&gt;get_force(<ref refid="class_spherical_s_l_1a56547945a90cae1f265fb9de079613c8" kindref="member">dpot</ref>[</highlight><highlight class="keywordtype">id</highlight><highlight class="normal">],<sp/>r);</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_spherical_s_l_1ae0fda047b7f9c1ea92e43f82c08e5ab9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1ae0fda047b7f9c1ea92e43f82c08e5ab9" kindref="member">get_dens_coefs</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>coef,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">=0);</highlight></codeline>
-<codeline lineno="109" refid="class_spherical_s_l_1a5bac68d4ae7eb863535afed992de6487" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a5bac68d4ae7eb863535afed992de6487" kindref="member">get_pot_coefs</ref><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>coef,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dp,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">=0);</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_spherical_s_l_1a494ce992296743b635fdd918c6fa9919" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a494ce992296743b635fdd918c6fa9919" kindref="member">dump_coefs</ref>(ofstream&amp;<sp/>out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>binary);</highlight></codeline>
-<codeline lineno="112" refid="class_spherical_s_l_1a3c053acbc4e12dc6e4547111c20b299e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a3c053acbc4e12dc6e4547111c20b299e" kindref="member">dump_basis</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>dumpname);</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_spherical_s_l_1af8b936dba3c38e0fd00fde226f60b995" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1af8b936dba3c38e0fd00fde226f60b995" kindref="member">set_compute</ref>()<sp/><sp/><sp/>{<sp/><ref refid="class_spherical_s_l_1a9671bd2fff23dd5eaeffb2a27447ef3a" kindref="member">compute</ref><sp/>=<sp/>1;}</highlight></codeline>
-<codeline lineno="115" refid="class_spherical_s_l_1a7b2907961ff0bb8be26f174b8b7e7b02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_s_l_1a7b2907961ff0bb8be26f174b8b7e7b02" kindref="member">unset_compute</ref>()<sp/>{<sp/><ref refid="class_spherical_s_l_1a9671bd2fff23dd5eaeffb2a27447ef3a" kindref="member">compute</ref><sp/>=<sp/>0;}</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119" refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;SphericalSL&gt;<sp/><ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref>;</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_spline_8_h.xml b/doxyxml/_spline_8_h.xml
deleted file mode 100644
index 50af72f..0000000
--- a/doxyxml/_spline_8_h.xml
+++ /dev/null
@@ -1,455 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_spline_8_h" kind="file" language="C++">
-    <compoundname>Spline.H</compoundname>
-    <includes local="no">cstdlib</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">cmath</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/Spline.H</label>
-        <link refid="_spline_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>cmath</label>
-      </node>
-      <node id="2">
-        <label>cstdlib</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="_spline_8_h_1a91e5251349db5d2dac0d48337128a8d0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <templateparamlist>
-          <param>
-            <type>class T</type>
-          </param>
-        </templateparamlist>
-        <type>void</type>
-        <definition>void Spline</definition>
-        <argsstring>(const std::vector&lt; T &gt; &amp;x, const std::vector&lt; T &gt; &amp;y, T yp1, T ypn, std::vector&lt; T &gt; &amp;y2)</argsstring>
-        <name>Spline</name>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>T</type>
-          <declname>yp1</declname>
-        </param>
-        <param>
-          <type>T</type>
-          <declname>ypn</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; T &gt; &amp;</type>
-          <declname>y2</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Spline.H" line="56" column="6" bodyfile="/home/weinberg/Projects/EXP/include/Spline.H" bodystart="56" bodyend="115"/>
-      </memberdef>
-      <memberdef kind="function" id="_spline_8_h_1adbd53b003c4b24e45adb7299ac0d3c30" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <templateparamlist>
-          <param>
-            <type>class T</type>
-          </param>
-        </templateparamlist>
-        <type>void</type>
-        <definition>void Splint1</definition>
-        <argsstring>(const std::vector&lt; T &gt; &amp;xa, const std::vector&lt; T &gt; &amp;ya, const std::vector&lt; T &gt; &amp;y2a, T x, T &amp;y, int even=0)</argsstring>
-        <name>Splint1</name>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>xa</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>ya</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>y2a</declname>
-        </param>
-        <param>
-          <type>T</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>T &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>even</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Spline.H" line="120" column="6" bodyfile="/home/weinberg/Projects/EXP/include/Spline.H" bodystart="120" bodyend="154"/>
-      </memberdef>
-      <memberdef kind="function" id="_spline_8_h_1a81e72d393dea03979d6a7a749193e57e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <templateparamlist>
-          <param>
-            <type>class T</type>
-          </param>
-        </templateparamlist>
-        <type>void</type>
-        <definition>void Splint2</definition>
-        <argsstring>(const std::vector&lt; T &gt; &amp;xa, const std::vector&lt; T &gt; &amp;ya, const std::vector&lt; T &gt; &amp;y2a, T x, T &amp;y, T &amp;dy, int even=0)</argsstring>
-        <name>Splint2</name>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>xa</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>ya</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>y2a</declname>
-        </param>
-        <param>
-          <type>T</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>T &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>T &amp;</type>
-          <declname>dy</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>even</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Spline.H" line="157" column="6" bodyfile="/home/weinberg/Projects/EXP/include/Spline.H" bodystart="157" bodyend="194"/>
-      </memberdef>
-      <memberdef kind="function" id="_spline_8_h_1a949a57250e3ed2816616d628068c0864" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <templateparamlist>
-          <param>
-            <type>class T</type>
-          </param>
-        </templateparamlist>
-        <type>void</type>
-        <definition>void Splint3</definition>
-        <argsstring>(const std::vector&lt; T &gt; &amp;xa, const std::vector&lt; T &gt; &amp;ya, const std::vector&lt; T &gt; &amp;y2a, T x, T &amp;y, T &amp;dy, T &amp;ddy, int even=0)</argsstring>
-        <name>Splint3</name>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>xa</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>ya</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; T &gt; &amp;</type>
-          <declname>y2a</declname>
-        </param>
-        <param>
-          <type>T</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>T &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>T &amp;</type>
-          <declname>dy</declname>
-        </param>
-        <param>
-          <type>T &amp;</type>
-          <declname>ddy</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>even</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Spline.H" line="198" column="6" bodyfile="/home/weinberg/Projects/EXP/include/Spline.H" bodystart="198" bodyend="235"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">/*****************************************************************************</highlight></codeline>
-<codeline lineno="2"><highlight class="comment"><sp/>*<sp/><sp/>Description:</highlight></codeline>
-<codeline lineno="3"><highlight class="comment"><sp/>*<sp/><sp/>-----------</highlight></codeline>
-<codeline lineno="4"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="5"><highlight class="comment"><sp/>*<sp/><sp/>This<sp/>routine<sp/>finds<sp/>the<sp/>cubic<sp/>spline<sp/>coefficients.<sp/><sp/>The<sp/>boundary<sp/>condi-</highlight></codeline>
-<codeline lineno="6"><highlight class="comment"><sp/>*<sp/><sp/>tions<sp/>may<sp/>be<sp/>one<sp/>of<sp/>the<sp/>following<sp/>three:</highlight></codeline>
-<codeline lineno="7"><highlight class="comment"><sp/>*<sp/><sp/><sp/><sp/><sp/><sp/><sp/>1)<sp/>&quot;natural,&quot;<sp/>that<sp/>is,<sp/>zero<sp/>second<sp/>derivatives</highlight></codeline>
-<codeline lineno="8"><highlight class="comment"><sp/>*<sp/><sp/><sp/><sp/><sp/><sp/><sp/>2)<sp/>first<sp/>derivatives<sp/>specified</highlight></codeline>
-<codeline lineno="9"><highlight class="comment"><sp/>*<sp/><sp/><sp/><sp/><sp/><sp/><sp/>3)<sp/>third<sp/>derivatives<sp/>computed<sp/>from<sp/>supplied<sp/>data</highlight></codeline>
-<codeline lineno="10"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="11"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="12"><highlight class="comment"><sp/>*<sp/><sp/>Call<sp/>sequence:</highlight></codeline>
-<codeline lineno="13"><highlight class="comment"><sp/>*<sp/><sp/>-------------</highlight></codeline>
-<codeline lineno="14"><highlight class="comment"><sp/>*<sp/><sp/>void<sp/>spline(x,y,n,yp1,ypn,y2);</highlight></codeline>
-<codeline lineno="15"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="16"><highlight class="comment"><sp/>*<sp/><sp/>int<sp/>n;</highlight></codeline>
-<codeline lineno="17"><highlight class="comment"><sp/>*<sp/><sp/>double<sp/>x[n],y[n],yp1,ypn,y2[n];</highlight></codeline>
-<codeline lineno="18"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="19"><highlight class="comment"><sp/>*<sp/><sp/>Parameters:</highlight></codeline>
-<codeline lineno="20"><highlight class="comment"><sp/>*<sp/><sp/>----------</highlight></codeline>
-<codeline lineno="21"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="22"><highlight class="comment"><sp/>*<sp/><sp/>n<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>number<sp/>of<sp/>supplied<sp/>grid<sp/>points</highlight></codeline>
-<codeline lineno="23"><highlight class="comment"><sp/>*<sp/><sp/>x<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>abcissa<sp/>array</highlight></codeline>
-<codeline lineno="24"><highlight class="comment"><sp/>*<sp/><sp/>y<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ordinate<sp/>array</highlight></codeline>
-<codeline lineno="25"><highlight class="comment"><sp/>*<sp/><sp/>yp1<sp/><sp/><sp/><sp/><sp/><sp/>boundary<sp/>condition<sp/>at<sp/>j=1</highlight></codeline>
-<codeline lineno="26"><highlight class="comment"><sp/>*<sp/><sp/>ypn<sp/><sp/><sp/><sp/><sp/><sp/>boundary<sp/>condition<sp/>at<sp/>j=n</highlight></codeline>
-<codeline lineno="27"><highlight class="comment"><sp/>*<sp/><sp/>y2<sp/><sp/><sp/><sp/><sp/><sp/><sp/>array<sp/>to<sp/>contain<sp/>spline<sp/>coefficients</highlight></codeline>
-<codeline lineno="28"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="29"><highlight class="comment"><sp/>*<sp/><sp/>Returns:</highlight></codeline>
-<codeline lineno="30"><highlight class="comment"><sp/>*<sp/><sp/>-------</highlight></codeline>
-<codeline lineno="31"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="32"><highlight class="comment"><sp/>*<sp/><sp/>None,<sp/>spline<sp/>coefficients<sp/>returned<sp/>by<sp/>pointer</highlight></codeline>
-<codeline lineno="33"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="34"><highlight class="comment"><sp/>*<sp/><sp/>Notes:</highlight></codeline>
-<codeline lineno="35"><highlight class="comment"><sp/>*<sp/><sp/>-----</highlight></codeline>
-<codeline lineno="36"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="37"><highlight class="comment"><sp/>*<sp/><sp/>If<sp/><sp/><sp/><sp/><sp/>yp1,yp2<sp/>&gt;<sp/><sp/>1.0e30<sp/><sp/>boundary<sp/>conditions<sp/>(1)<sp/>natural<sp/>splines<sp/>are<sp/>used</highlight></codeline>
-<codeline lineno="38"><highlight class="comment"><sp/>*<sp/><sp/>If<sp/><sp/><sp/><sp/><sp/>yp1,yp2<sp/>&lt;<sp/>-1.0e30<sp/><sp/>boundary<sp/>conditions<sp/>(3)<sp/>approx.<sp/>3rd<sp/>derivs<sp/>used</highlight></codeline>
-<codeline lineno="39"><highlight class="comment"><sp/>*<sp/><sp/>Otherwise<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>boundary<sp/>conditions<sp/>(2)<sp/>explicit<sp/>2nd<sp/>derivs<sp/>used</highlight></codeline>
-<codeline lineno="40"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="41"><highlight class="comment"><sp/>*<sp/><sp/>By:</highlight></codeline>
-<codeline lineno="42"><highlight class="comment"><sp/>*<sp/><sp/>--</highlight></codeline>
-<codeline lineno="43"><highlight class="comment"><sp/>*<sp/><sp/>Adopted<sp/>from<sp/>Numerical<sp/>Recipes,<sp/>Press<sp/>et<sp/>al.</highlight></codeline>
-<codeline lineno="44"><highlight class="comment"><sp/>*<sp/><sp/>Third<sp/>deriv.<sp/>boundary<sp/>condition<sp/>---<sp/><sp/>MDW<sp/>11/13/88</highlight></codeline>
-<codeline lineno="45"><highlight class="comment"><sp/>*</highlight></codeline>
-<codeline lineno="46"><highlight class="comment"><sp/>***************************************************************************/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>Spline_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>Spline_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstdlib&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="56" refid="_spline_8_h_1a91e5251349db5d2dac0d48337128a8d0" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="_spline_8_h_1a91e5251349db5d2dac0d48337128a8d0" kindref="member">Spline</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;y,<sp/>T<sp/>yp1,<sp/>T<sp/>ypn,<sp/></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;T&gt;<sp/>&amp;y2)</highlight></codeline>
-<codeline lineno="58"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,k,i1,i2;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>T<sp/>d1,d2,p,qn,un;</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/>T<sp/>sig;</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/>i1<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/>i2<sp/>=<sp/>x.size()<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/>std::vector&lt;T&gt;<sp/>u(i2);</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/>y2.erase(y2.begin(),<sp/>y2.end());</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/>y2<sp/>=<sp/>std::vector&lt;T&gt;(i2);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>Boundary<sp/>conditions<sp/>obtained<sp/>by<sp/>fixing<sp/>third<sp/>derivative<sp/>as<sp/>computed</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>by<sp/>divided<sp/>differences</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(yp1<sp/>&lt;<sp/>-0.99e30)<sp/>{</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/>y2[i1+0]<sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/>d2<sp/><sp/>=<sp/><sp/>((y[i1+3]-y[i1+2])/(x[i1+3]-x[i1+2])<sp/>-<sp/>(y[i1+2]-y[i1+1])/(x[i1+2]-x[i1+1]))/(x[i1+3]-x[i1+1]);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/>d1<sp/><sp/>=<sp/><sp/>((y[i1+2]-y[i1+1])/(x[i1+2]-x[i1+1])<sp/>-<sp/>(y[i1+1]-y[i1+0])/(x[i1+1]-x[i1+0]))/(x[i1+2]-x[i1+0]);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/>u[i1+0]<sp/>=<sp/>-6.0*(d2-d1)*(x[i1+1]-x[i1+0])/(x[i1+3]-x[i1+0]);</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>&quot;Normal&quot;<sp/>zero<sp/>second<sp/>derivative<sp/>boundary<sp/>conditions<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(yp1<sp/>&gt;<sp/>0.99e30)</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/>y2[i1+0]<sp/>=<sp/>u[i1+0]<sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/>Known<sp/>first<sp/>derivative<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/>y2[i1+0]<sp/>=<sp/>-0.5;</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/>u[i1+0]<sp/>=<sp/>(3.0/(x[i1+1]-x[i1+0]))*((y[i1+1]-y[i1+0])/(x[i1+1]-x[i1+0])-yp1);</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(i=i1+1;i&lt;i2;i++)<sp/>{</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/>sig<sp/>=<sp/>(x[i]-x[i-1])/(x[i+1]-x[i-1]);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/>p<sp/>=<sp/>sig*y2[i-1]+2.0;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>y2[i]<sp/>=<sp/>(sig-1.0)/p;</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/>u[i]<sp/>=<sp/>(y[i+1]-y[i])/(x[i+1]-x[i])<sp/>-<sp/>(y[i]-y[i-1])/(x[i]-x[i-1]);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/>u[i]<sp/>=<sp/>(6.0*u[i]/(x[i+1]-x[i-1])-sig*u[i-1])/p;</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>Boundary<sp/>conditions<sp/>obtained<sp/>by<sp/>fixing<sp/>third<sp/>derivative<sp/>as<sp/>computed</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>by<sp/>divided<sp/>differences</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(ypn<sp/>&lt;<sp/>-0.99e30)<sp/>{</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/>d2<sp/>=<sp/>((y[i2]-y[i2-1])/(x[i2]-x[i2-1])<sp/>-<sp/></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(y[i2-1]-y[i2-2])/(x[i2-1]-x[i2-2]))/(x[i2]-x[i2-2]);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/>d1<sp/>=<sp/>((y[i2-1]-y[i2-2])/(x[i2-1]-x[i2-2])<sp/>-<sp/></highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(y[i2-2]-y[i2-3])/(x[i2-2]-x[i2-3]))/(x[i2-1]-x[i2-3]);</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/>qn<sp/>=<sp/>-1.0;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/>un<sp/>=<sp/>6.0*(d2-d1)*(x[i2]-x[i2-1])/(x[i2]-x[i2-3]);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>&quot;Normal&quot;<sp/>zero<sp/>second<sp/>derivative<sp/>boundary<sp/>conditions<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(ypn<sp/>&gt;<sp/>0.99e30)</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>qn<sp/>=<sp/>un<sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/><sp/>Known<sp/>first<sp/>derivative<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>qn<sp/>=<sp/>0.5;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/>un<sp/>=<sp/>(3.0/(x[i2]-x[i2-1]))*(ypn-(y[i2]-y[i2-1])/(x[i2]-x[i2-1]));</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/>y2[i2]<sp/>=<sp/>(un-qn*u[i2-1])/(qn*y2[i2-1]+1.0);</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(k=i2-1;k&gt;=i1;k--)</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/>y2[k]<sp/>=<sp/>y2[k]*y2[k+1]+u[k];</highlight></codeline>
-<codeline lineno="115"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="120" refid="_spline_8_h_1adbd53b003c4b24e45adb7299ac0d3c30" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="_spline_8_h_1adbd53b003c4b24e45adb7299ac0d3c30" kindref="member">Splint1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;xa,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;ya,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;y2a,<sp/></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>T<sp/>x,<sp/>T<sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>even=0)</highlight></codeline>
-<codeline lineno="122"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>klo,<sp/>khi,<sp/>n1,<sp/>n2,<sp/>k;</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/>T<sp/>h,b,a;</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/>n1<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/>n2<sp/>=<sp/>xa.size()<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(even)<sp/>{</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>(int)(<sp/>(x-xa[n1])/(xa[n2]-xa[n1])*(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)(n2-n1)<sp/>)<sp/>+<sp/>n1;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>klo&lt;n1<sp/>?<sp/>n1<sp/>:<sp/>klo;</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>klo&lt;n2<sp/>?<sp/>klo<sp/>:<sp/>n2-1;</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/>khi<sp/>=<sp/>klo+1;</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>n1;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/>khi<sp/>=<sp/>n2;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(khi-klo<sp/>&gt;<sp/>1)<sp/>{</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>k<sp/>=<sp/>(khi+klo)<sp/>&gt;&gt;<sp/>1;</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xa[k]<sp/>&gt;<sp/>x)<sp/>khi<sp/>=<sp/>k;</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>klo<sp/>=<sp/>k;</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/>h<sp/>=<sp/>xa[khi]-xa[klo];</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(h<sp/>==<sp/>0.0)<sp/>{</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/>cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Bad<sp/>XA<sp/>input<sp/>to<sp/>routine<sp/>Splint1\n&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/>exit(-1);</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/>a<sp/>=<sp/>(xa[khi]-x)/h;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/>b<sp/>=<sp/>(x-xa[klo])/h;</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/>y<sp/>=<sp/>a*ya[klo]+b*ya[khi]+((a*a*a-a)*y2a[klo]+(b*b*b-b)*y2a[khi])*(h*h)/6.0;</highlight></codeline>
-<codeline lineno="154"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="157" refid="_spline_8_h_1a81e72d393dea03979d6a7a749193e57e" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="_spline_8_h_1a81e72d393dea03979d6a7a749193e57e" kindref="member">Splint2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;xa,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;ya,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;y2a,<sp/></highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>T<sp/>x,<sp/>T<sp/>&amp;y,<sp/>T<sp/>&amp;dy,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>even=0)</highlight></codeline>
-<codeline lineno="159"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>klo,<sp/>khi,<sp/>n1,<sp/>n2,<sp/>k;</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/>T<sp/>h,b,a;</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"></highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/>n1<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/>n2<sp/>=<sp/>xa.size()<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(even)<sp/>{</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>(int)(<sp/>(x-xa[n1])/(xa[n2]-xa[n1])*(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)(n2-n1)<sp/>)<sp/>+<sp/>n1;</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>klo&lt;n2<sp/>?<sp/>klo<sp/>:<sp/>n2-1;</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/>khi<sp/>=<sp/>klo+1;</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>n1;</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/>khi<sp/>=<sp/>n2;</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(khi-klo<sp/>&gt;<sp/>1)<sp/>{</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>k<sp/>=<sp/>(khi+klo)<sp/>&gt;&gt;<sp/>1;</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xa[k]<sp/>&gt;<sp/>x)<sp/>khi<sp/>=<sp/>k;</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>klo<sp/>=<sp/>k;</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/>h<sp/>=<sp/>xa[khi]-xa[klo];</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(h<sp/>==<sp/>0.0)<sp/>{</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/>cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Bad<sp/>XA<sp/>input<sp/>to<sp/>routine<sp/>Splint2\n&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/>exit(-1);</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/>a<sp/>=<sp/>(xa[khi]-x)/h;</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/>b<sp/>=<sp/>(x-xa[klo])/h;</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/>y<sp/>=<sp/>a*ya[klo]+b*ya[khi]+((a*a*a-a)*y2a[klo]+(b*b*b-b)*y2a[khi])*(h*h)/6.0;</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/>dy<sp/>=<sp/>(-ya[klo]+ya[khi])/h<sp/>+</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/>(-(3.0*a*a-1.0)*y2a[klo]+(3.0*b*b-1.0)*y2a[khi])</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*h/6.0;</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"></highlight><highlight class="comment">/*<sp/><sp/>ddy<sp/>=<sp/>a*y2a[klo]+b*y2a[khi];<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="194"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="198" refid="_spline_8_h_1a949a57250e3ed2816616d628068c0864" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="_spline_8_h_1a949a57250e3ed2816616d628068c0864" kindref="member">Splint3</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;xa,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;ya,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;T&gt;<sp/>&amp;y2a,<sp/></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>T<sp/>x,<sp/>T<sp/>&amp;y,<sp/>T<sp/>&amp;dy,<sp/>T<sp/>&amp;ddy,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>even=0)</highlight></codeline>
-<codeline lineno="200"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>klo,<sp/>khi,<sp/>n1,<sp/>n2,<sp/>k;</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/>T<sp/>h,b,a;</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/>n1<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/>n2<sp/>=<sp/>xa.size()<sp/>-<sp/>1;</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(even)<sp/>{</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>(int)(<sp/>(x-xa[n1])/(xa[n2]-xa[n1])*(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)(n2-n1)<sp/>)<sp/>+<sp/>n1;</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>klo&lt;n2<sp/>?<sp/>klo<sp/>:<sp/>n2-1;</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/>khi<sp/>=<sp/>klo+1;</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/>klo<sp/>=<sp/>n1;</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/>khi<sp/>=<sp/>n2;</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(khi-klo<sp/>&gt;<sp/>1)<sp/>{</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>k<sp/>=<sp/>(khi+klo)<sp/>&gt;&gt;<sp/>1;</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xa[k]<sp/>&gt;<sp/>x)<sp/>khi<sp/>=<sp/>k;</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>klo<sp/>=<sp/>k;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"></highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/>h<sp/>=<sp/>xa[khi]-xa[klo];</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(h<sp/>==<sp/>0.0)<sp/>{</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/>cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Bad<sp/>XA<sp/>input<sp/>to<sp/>routine<sp/>Splint3\n&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/>exit(-1);</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/>a<sp/>=<sp/>(xa[khi]-x)/h;</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/>b<sp/>=<sp/>(x-xa[klo])/h;</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/>y<sp/>=<sp/>a*ya[klo]+b*ya[khi]+((a*a*a-a)*y2a[klo]+(b*b*b-b)*y2a[khi])*(h*h)/6.0;</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/>dy<sp/>=<sp/>(-ya[klo]+ya[khi])/h<sp/>+</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/>(-(3.0*a*a-1.0)*y2a[klo]+(3.0*b*b-1.0)*y2a[khi])</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*h/6.0;</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/>ddy<sp/>=<sp/>a*y2a[klo]+b*y2a[khi];</highlight></codeline>
-<codeline lineno="235"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"></highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/Spline.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_stats_m_p_i_8_h.xml b/doxyxml/_stats_m_p_i_8_h.xml
deleted file mode 100644
index f6624b7..0000000
--- a/doxyxml/_stats_m_p_i_8_h.xml
+++ /dev/null
@@ -1,162 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_stats_m_p_i_8_h" kind="file" language="C++">
-    <compoundname>StatsMPI.H</compoundname>
-    <includes refid="localmpi_8_h" local="yes">localmpi.H</includes>
-    <includes refid="_species_8_h" local="yes">Species.H</includes>
-    <includes local="no">array</includes>
-    <includes local="no">map</includes>
-    <incdepgraph>
-      <node id="8">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
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-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="_species_8_h_1a3f0873301e93f9a5e3ddf62fc0af14e0" kindref="member">speciesKey</ref><sp/>k<sp/>=<sp/>s.first;</highlight></codeline>
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-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_stats_m_p_i_1aeabb97176fa75279b1370c7b977f0b68" kindref="member">cntT</ref>.clear();</highlight></codeline>
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-<codeline lineno="39"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="48"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_stats_m_p_i_1aeabb97176fa75279b1370c7b977f0b68" kindref="member">cntT</ref>.find(k)<sp/>==<sp/><ref refid="class_stats_m_p_i_1aeabb97176fa75279b1370c7b977f0b68" kindref="member">cntT</ref>.end())<sp/>{</highlight></codeline>
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-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_stats_m_p_i_1a7177fb05946071fc821a1b7ef699c13e" kindref="member">curT</ref>[k]<sp/><sp/>=<sp/>val<sp/>*<sp/>wgt;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_stats_m_p_i_1a24fd7cca8b971316c9ddd286f26ba6a5" kindref="member">vmin</ref>[k]<sp/><sp/>=<sp/>val;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_stats_m_p_i_1a947e5b4ceb06780a9eed236d97d9d95e" kindref="member">vmax</ref>[k]<sp/><sp/>=<sp/>val;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_stats_m_p_i_1aeabb97176fa75279b1370c7b977f0b68" kindref="member">cntT</ref>[k]<sp/>+=<sp/>wgt;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_stats_m_p_i_1a7177fb05946071fc821a1b7ef699c13e" kindref="member">curT</ref>[k]<sp/>+=<sp/>val<sp/>*<sp/>wgt;</highlight></codeline>
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-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="68"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_stats_m_p_i_1a60c418b8b0a9d9c32986b5069ca23245" kindref="member">share</ref>();</highlight></codeline>
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-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>ret[k]<sp/>=<sp/>{<ref refid="class_stats_m_p_i_1aaa1554f6527aa20efea41ed279f85251" kindref="member">ccnt</ref>[k],<sp/><ref refid="class_stats_m_p_i_1abd6d00928a5fd060f644f564dc731d1e" kindref="member">vsum</ref>[k],<sp/><ref refid="class_stats_m_p_i_1a24fd7cca8b971316c9ddd286f26ba6a5" kindref="member">vmin</ref>[k],<sp/><ref refid="class_stats_m_p_i_1a947e5b4ceb06780a9eed236d97d9d95e" kindref="member">vmax</ref>[k]};</highlight></codeline>
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-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;</highlight></codeline>
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-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="80"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
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-<codeline lineno="85"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/StatsMPI.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_string_tok_8_h.xml b/doxyxml/_string_tok_8_h.xml
deleted file mode 100644
index ebc9af5..0000000
--- a/doxyxml/_string_tok_8_h.xml
+++ /dev/null
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diff --git a/doxyxml/_swap_8_h.xml b/doxyxml/_swap_8_h.xml
deleted file mode 100644
index 74891e3..0000000
--- a/doxyxml/_swap_8_h.xml
+++ /dev/null
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-<codeline lineno="11"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">union<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12" refid="class_swap_1ab0e6caeb0bcd672f45a7c76605cf26b4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>T<sp/><ref refid="class_swap_1ab0e6caeb0bcd672f45a7c76605cf26b4" kindref="member">n</ref>;</highlight></codeline>
-<codeline lineno="13" refid="class_swap_1a6dc37c0d395d9b2fb1e64663ff915966" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><ref refid="class_swap_1a6dc37c0d395d9b2fb1e64663ff915966" kindref="member">b</ref>[</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(T)];</highlight></codeline>
-<codeline lineno="14" refid="class_swap_1a03f540ca067876830ba1578149a3df94" refkind="member"><highlight class="normal"><sp/><sp/>}<sp/><ref refid="class_swap_1a03f540ca067876830ba1578149a3df94" kindref="member">u</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="18" refid="class_swap_1aa2689005b6ec0a473f765ceb3f818d53" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_swap_1aa2689005b6ec0a473f765ceb3f818d53" kindref="member">Swap</ref>()<sp/>:<sp/><ref refid="class_swap_1a8a9bd2ae6473c842d407f4900eae32a5" kindref="member">done</ref>(0)<sp/>{}</highlight></codeline>
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-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_swap_1a4dc343c404ffa37a69c3657d8d35e45e" refkind="member"><highlight class="normal"><sp/><sp/>T&amp;<sp/><ref refid="class_swap_1a4dc343c404ffa37a69c3657d8d35e45e" kindref="member">in</ref>()<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_swap_1a03f540ca067876830ba1578149a3df94" kindref="member">u</ref>.n;}</highlight></codeline>
-<codeline lineno="22" refid="class_swap_1a00fc85a2685cb00fb2b1f54e5a212ab6" refkind="member"><highlight class="normal"><sp/><sp/>T&amp;<sp/><ref refid="class_swap_1a00fc85a2685cb00fb2b1f54e5a212ab6" kindref="member">rin</ref>()<sp/>{<ref refid="class_swap_1a8a9bd2ae6473c842d407f4900eae32a5" kindref="member">done</ref>=0;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_swap_1a03f540ca067876830ba1578149a3df94" kindref="member">u</ref>.n;}</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_swap_1a1e5b1c625ec09fded0ecbed0f3f1cee3" refkind="member"><highlight class="normal"><sp/><sp/>T<sp/><ref refid="class_swap_1a1e5b1c625ec09fded0ecbed0f3f1cee3" kindref="member">out</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_swap_1a8a9bd2ae6473c842d407f4900eae32a5" kindref="member">done</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>t;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">short</highlight><highlight class="normal"><sp/><ref refid="class_swap_1ab0e6caeb0bcd672f45a7c76605cf26b4" kindref="member">n</ref><sp/>=<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(T);</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>j=0;<sp/>j&lt;<ref refid="class_swap_1ab0e6caeb0bcd672f45a7c76605cf26b4" kindref="member">n</ref>/2;<sp/>j++)<sp/>{</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>t<sp/>=<sp/><ref refid="class_swap_1a03f540ca067876830ba1578149a3df94" kindref="member">u</ref>.b[j];</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_swap_1a03f540ca067876830ba1578149a3df94" kindref="member">u</ref>.b[j]<sp/>=<sp/><ref refid="class_swap_1a03f540ca067876830ba1578149a3df94" kindref="member">u</ref>.b[<ref refid="class_swap_1ab0e6caeb0bcd672f45a7c76605cf26b4" kindref="member">n</ref>-1-j];</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_swap_1a03f540ca067876830ba1578149a3df94" kindref="member">u</ref>.b[<ref refid="class_swap_1ab0e6caeb0bcd672f45a7c76605cf26b4" kindref="member">n</ref>-1-j]<sp/>=<sp/>t;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_swap_1a8a9bd2ae6473c842d407f4900eae32a5" kindref="member">done</ref><sp/>=<sp/>1;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_swap_1a03f540ca067876830ba1578149a3df94" kindref="member">u</ref>.n;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/Swap.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_table_grid_8_h.xml b/doxyxml/_table_grid_8_h.xml
deleted file mode 100644
index 307d5df..0000000
--- a/doxyxml/_table_grid_8_h.xml
+++ /dev/null
@@ -1,122 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_table_grid_8_h" kind="file" language="C++">
-    <compoundname>TableGrid.H</compoundname>
-    <includes local="no">sstream</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">map</includes>
-    <includes refid="_three_d_grid_8_h" local="no">ThreeDGrid.H</includes>
-    <includedby refid="_data_grid_8_h" local="no">/home/weinberg/Projects/EXP/include/DataGrid.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/TableGrid.H</label>
-        <link refid="_table_grid_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>ThreeDGrid.H</label>
-        <link refid="_three_d_grid_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="2">
-        <label>sstream</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/DataGrid.H</label>
-        <link refid="_data_grid_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/TableGrid.H</label>
-        <link refid="_table_grid_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_table_grid" prot="public">TableGrid</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="_table_grid_8_h_1ae132570c032fd3536d208d327094a673" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_table_grid" kindref="compound">TableGrid</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;TableGrid&gt; TableGridPtr</definition>
-        <argsstring></argsstring>
-        <name>TableGridPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/TableGrid.H" line="43" column="25" bodyfile="/home/weinberg/Projects/EXP/include/TableGrid.H" bodystart="43" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_TableGrid_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_TableGrid_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;sstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_three_d_grid_8_h" kindref="compound">ThreeDGrid.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_table_grid" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_table_grid" kindref="compound">TableGrid</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid" kindref="compound">ThreeDGrid</ref></highlight></codeline>
-<codeline lineno="19"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Knots</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_table_grid_1afd0003686ea337b0e369cc7faec5cd5a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;float&gt;<sp/><ref refid="class_table_grid_1afd0003686ea337b0e369cc7faec5cd5a" kindref="member">XX</ref>,<sp/><ref refid="class_table_grid_1a48184ddf02c0b77dca8f477cf6326b2a" kindref="member">YY</ref>,<sp/><ref refid="class_table_grid_1a5a75a474556fc3ae8d98904825359996" kindref="member">ZZ</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Data</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="class_table_grid_1a3cd06beab136e1e8cf526295bdfa82b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/><ref refid="class_dynamic3d_array" kindref="compound">Dynamic3dArray&lt;double&gt;</ref><sp/><ref refid="class_table_grid_1a3cd06beab136e1e8cf526295bdfa82b6" kindref="member">dtype</ref>;</highlight></codeline>
-<codeline lineno="26" refid="class_table_grid_1a2c6ec677e36065fb7d2d5f618f04ade2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;dtype&gt;<sp/><ref refid="class_table_grid_1a2c6ec677e36065fb7d2d5f618f04ade2" kindref="member">dptr</ref>;</highlight></codeline>
-<codeline lineno="27" refid="class_table_grid_1a9d8b22cad2bf7b85dbc49c2570c243ae" refkind="member"><highlight class="normal"><sp/><sp/>std::map&lt;std::string,<sp/>dptr&gt;<sp/><ref refid="class_table_grid_1a9d8b22cad2bf7b85dbc49c2570c243ae" kindref="member">arrays</ref>;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="31" refid="class_table_grid_1a0da0f6d0a53fc46b94f7b6272830fce0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_table_grid_1a0da0f6d0a53fc46b94f7b6272830fce0" kindref="member">TableGrid</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" kindref="member">nx</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" kindref="member">ny</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" kindref="member">nz</ref>,</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" kindref="member">xmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" kindref="member">xmax</ref>,</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" kindref="member">ymin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" kindref="member">ymax</ref>,</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" kindref="member">zmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" kindref="member">zmax</ref>);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_table_grid_1abc9c53d0f3a7be2c49f3f30a3a591b5c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_table_grid_1abc9c53d0f3a7be2c49f3f30a3a591b5c" kindref="member">Add</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;&amp;<sp/>data,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_table_grid_1a737446856ac45bc55773fe2e525b54fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_table_grid_1a737446856ac45bc55773fe2e525b54fd" kindref="member">Write</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="41"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="_table_grid_8_h_1ae132570c032fd3536d208d327094a673" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;TableGrid&gt;<sp/><ref refid="_table_grid_8_h_1ae132570c032fd3536d208d327094a673" kindref="member">TableGridPtr</ref>;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/TableGrid.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_temp_file_8_h.xml b/doxyxml/_temp_file_8_h.xml
deleted file mode 100644
index d367bd4..0000000
--- a/doxyxml/_temp_file_8_h.xml
+++ /dev/null
@@ -1,120 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_temp_file_8_h" kind="file" language="C++">
-    <compoundname>TempFile.H</compoundname>
-    <includes local="no">filesystem</includes>
-    <includes local="no">iostream</includes>
-    <includes local="no">random</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/TempFile.H</label>
-        <link refid="_temp_file_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>filesystem</label>
-      </node>
-      <node id="3">
-        <label>iostream</label>
-      </node>
-      <node id="4">
-        <label>random</label>
-      </node>
-    </incdepgraph>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="_temp_file_8_h_1a16a6113a09bbe692aadee57353b8ea61" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::filesystem::path</type>
-        <definition>std::filesystem::path temp_file</definition>
-        <argsstring>(const std::string &amp;prefix, std::size_t length=16)</argsstring>
-        <name>temp_file</name>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>prefix</declname>
-        </param>
-        <param>
-          <type>std::size_t</type>
-          <declname>length</declname>
-          <defval>16</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Generate a unique file name with a given prefix and &apos;length&apos; random characters. The routine will check for existence and attempt &apos;max_try&apos; times to make unique name. Otherwise, it throws an exception reporting the last attempted file name. We use std::filesystem to obtain the path for temporary files. The value of max_try=1000 by default.</para>
-<para>Examples:</para>
-<para>auto path = temp_file(&quot;my_prog&quot;); // Uses the default length=16 auto path = temp_file(&quot;my_prog&quot;, 8); // User specfied length=8 </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/TempFile.H" line="20" column="23" bodyfile="/home/weinberg/Projects/EXP/include/TempFile.H" bodystart="20" bodyend="66"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_TempFile_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_TempFile_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;filesystem&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;random&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="_temp_file_8_h_1a16a6113a09bbe692aadee57353b8ea61" refkind="member"><highlight class="normal">std::filesystem::path<sp/><ref refid="_temp_file_8_h_1a16a6113a09bbe692aadee57353b8ea61" kindref="member">temp_file</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>prefix,<sp/>std::size_t<sp/>length=16)</highlight></codeline>
-<codeline lineno="21"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Allowed<sp/>characters</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>alphanum<sp/>=</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;ABCDEFGHIJKLMNOPQRSTUVWXYZ&quot;</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;abcdefghijklmnopqrstuvwxyz&quot;</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;0123456789&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Make<sp/>a<sp/>random<sp/>number<sp/>generator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/>std::random_device<sp/>rand_dev;<sp/><sp/></highlight><highlight class="comment">//<sp/>This<sp/>should<sp/>be<sp/>seeded<sp/>by</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>/dev/urandom<sp/>in<sp/>linux</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/>std::mt19937<sp/>gen(rand_dev());</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/>std::uniform_int_distribution&lt;&gt;<sp/>dist(0,<sp/>alphanum.size()<sp/>-<sp/>1);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>tries<sp/>to<sp/>find<sp/>unique<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>max_try<sp/>=<sp/>1000;<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>If<sp/>we<sp/>can&apos;t<sp/>find<sp/>a<sp/>unique<sp/>file<sp/>in</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>1000<sp/>tries,<sp/>there<sp/>is<sp/>probably<sp/>a</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>systematic<sp/>problem.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>try_num<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/>std::filesystem::path<sp/>path;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">do</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/>rs<sp/>=<sp/>prefix<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;_&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(std::size_t<sp/>i=0;<sp/>i&lt;length;<sp/>++i)<sp/>rs<sp/>+=<sp/>alphanum[dist(gen)];</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/>path<sp/>=<sp/>std::filesystem::temp_directory_path()<sp/>/<sp/>rs;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/>try_num++;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(std::filesystem::exists(path)<sp/>and<sp/>try_num&lt;max_try);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Still<sp/>can&apos;t<sp/>find<sp/>a<sp/>unique<sp/>file??</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(try_num==max_try)<sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;EXP::TempFile:<sp/>could<sp/>not<sp/>find<sp/>unique<sp/>temporary<sp/>file<sp/>after<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>max_try<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>attempts.<sp/>Last<sp/>try<sp/>was:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>path;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Return<sp/>the<sp/>path<sp/>to<sp/>a<sp/>unique<sp/>temporary<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>path;</highlight></codeline>
-<codeline lineno="66"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/TempFile.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_three_d_grid_8_h.xml b/doxyxml/_three_d_grid_8_h.xml
deleted file mode 100644
index 7a8b087..0000000
--- a/doxyxml/_three_d_grid_8_h.xml
+++ /dev/null
@@ -1,186 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_three_d_grid_8_h" kind="file" language="C++">
-    <compoundname>ThreeDGrid.H</compoundname>
-    <includes local="no">vector</includes>
-    <includes local="no">sstream</includes>
-    <includes local="no">memory</includes>
-    <includedby refid="_table_grid_8_h" local="no">/home/weinberg/Projects/EXP/include/TableGrid.H</includedby>
-    <includedby refid="_vtk_grid_8_h" local="no">/home/weinberg/Projects/EXP/include/VtkGrid.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/ThreeDGrid.H</label>
-        <link refid="_three_d_grid_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="3">
-        <label>sstream</label>
-      </node>
-      <node id="2">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/include/DataGrid.H</label>
-        <link refid="_data_grid_8_h"/>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/TableGrid.H</label>
-        <link refid="_table_grid_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/ThreeDGrid.H</label>
-        <link refid="_three_d_grid_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/include/VtkGrid.H</label>
-        <link refid="_vtk_grid_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_dynamic2d_array" prot="public">Dynamic2dArray</innerclass>
-    <innerclass refid="class_dynamic3d_array" prot="public">Dynamic3dArray</innerclass>
-    <innerclass refid="class_three_d_grid" prot="public">ThreeDGrid</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="_three_d_grid_8_h_1abc218c0a19f8602e69200454c9561499" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_three_d_grid" kindref="compound">ThreeDGrid</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;ThreeDGrid&gt; ThreeDGridPtr</definition>
-        <argsstring></argsstring>
-        <name>ThreeDGridPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="51" column="25" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="51" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_ThreeDGrid_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_ThreeDGrid_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;sstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_three_d_grid" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_three_d_grid" kindref="compound">ThreeDGrid</ref></highlight></codeline>
-<codeline lineno="19"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21" refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" kindref="member">nx</ref>,<sp/><ref refid="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" kindref="member">ny</ref>,<sp/><ref refid="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" kindref="member">nz</ref>;</highlight></codeline>
-<codeline lineno="22" refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" kindref="member">xmin</ref>,<sp/><ref refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" kindref="member">xmax</ref>,<sp/><ref refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" kindref="member">ymin</ref>,<sp/><ref refid="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" kindref="member">ymax</ref>,<sp/><ref refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" kindref="member">zmin</ref>,<sp/><ref refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" kindref="member">zmax</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_three_d_grid_1a602e5d83286c984b71154d538efa97d5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_three_d_grid_1a602e5d83286c984b71154d538efa97d5" kindref="member">ThreeDGrid</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" kindref="member">nx</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" kindref="member">ny</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" kindref="member">nz</ref>,</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" kindref="member">xmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" kindref="member">xmax</ref>,</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" kindref="member">ymin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" kindref="member">ymax</ref>,</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" kindref="member">zmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" kindref="member">zmax</ref>)<sp/>:</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" kindref="member">nx</ref>(<ref refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" kindref="member">nx</ref>),<sp/><ref refid="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" kindref="member">ny</ref>(<ref refid="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" kindref="member">ny</ref>),<sp/><ref refid="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" kindref="member">nz</ref>(<ref refid="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" kindref="member">nz</ref>),</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" kindref="member">xmin</ref>(<ref refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" kindref="member">xmin</ref>),<sp/><ref refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" kindref="member">xmax</ref>(<ref refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" kindref="member">xmax</ref>),</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" kindref="member">ymin</ref>(<ref refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" kindref="member">ymin</ref>),<sp/><ref refid="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" kindref="member">ymax</ref>(<ref refid="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" kindref="member">ymax</ref>),</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" kindref="member">zmin</ref>(<ref refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" kindref="member">zmin</ref>),<sp/><ref refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" kindref="member">zmax</ref>(<ref refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" kindref="member">zmax</ref>)<sp/>{}</highlight></codeline>
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-<codeline lineno="84"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="87" refid="class_dynamic2d_array_1a838f8d7263aa443369ea392ced6ce849" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;T&gt;<sp/>&gt;<sp/><ref refid="class_dynamic2d_array_1a838f8d7263aa443369ea392ced6ce849" kindref="member">dArray</ref>;<sp/><sp/></highlight></codeline>
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-<codeline lineno="94"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_dynamic3d_array_1a74875cb6475c43326f68fd6cbffc2801" kindref="member">tArray</ref>.resize(rows);</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>&amp;<sp/>d<sp/>:<sp/><ref refid="class_dynamic3d_array_1a74875cb6475c43326f68fd6cbffc2801" kindref="member">tArray</ref>)<sp/>d.resize(cols,<sp/>levs);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_dynamic3d_array_1a74875cb6475c43326f68fd6cbffc2801" kindref="member">tArray</ref>[i];</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="113"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_dynamic3d_array_1a74875cb6475c43326f68fd6cbffc2801" kindref="member">tArray</ref>[i];</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="119"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_dynamic3d_array_1a74875cb6475c43326f68fd6cbffc2801" kindref="member">tArray</ref>.resize(rows);</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>&amp;<sp/>v<sp/>:<sp/><ref refid="class_dynamic3d_array_1a74875cb6475c43326f68fd6cbffc2801" kindref="member">tArray</ref>)<sp/>v.resize(cols,<sp/>levs);</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="125" refid="class_dynamic3d_array_1a74875cb6475c43326f68fd6cbffc2801" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Dynamic2dArray&lt;T&gt;&gt;<sp/><ref refid="class_dynamic3d_array_1a74875cb6475c43326f68fd6cbffc2801" kindref="member">tArray</ref>;</highlight></codeline>
-<codeline lineno="126"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_timer_8_h.xml b/doxyxml/_timer_8_h.xml
deleted file mode 100644
index ed6d6e9..0000000
--- a/doxyxml/_timer_8_h.xml
+++ /dev/null
@@ -1,386 +0,0 @@
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-    <includes local="no">iostream</includes>
-    <includes local="no">cstdlib</includes>
-    <includes local="no">chrono</includes>
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-    <includedby refid="_running_time_8_h" local="no">/home/weinberg/Projects/EXP/include/RunningTime.H</includedby>
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deleted file mode 100644
index 74c89a4..0000000
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_TwoCenter_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_TwoCenter_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="84"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_two_center_1a4697b2679e1325a3cfc78ab80b094784" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>double<sp/>(<ref refid="class_two_center" kindref="compound">TwoCenter</ref>::*<ref refid="class_two_center_1a4697b2679e1325a3cfc78ab80b094784" kindref="member">mixFunc</ref>)(double<sp/>*p);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Global<sp/>parameters</highlight></codeline>
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-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="100" refid="class_two_center_1a9489bd2add9e9d423e03b0854348d293" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_two_center_1a9489bd2add9e9d423e03b0854348d293" kindref="member">TwoCenter</ref>(<ref refid="class_component" kindref="compound">Component</ref>*<sp/>c0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103" refid="class_two_center_1a02ec2f56f013952ba88fe3db67d52c9d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_two_center_1a02ec2f56f013952ba88fe3db67d52c9d" kindref="member">~TwoCenter</ref>();</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_two_center_1a0a597e62e05bd437540412fdd1dd0ba5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1a0a597e62e05bd437540412fdd1dd0ba5" kindref="member">determine_coefficients</ref>(<ref refid="class_component" kindref="compound">Component</ref><sp/>*c);</highlight></codeline>
-<codeline lineno="109" refid="class_two_center_1a92e47a350f1483a891a69d9972d5af59" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1a92e47a350f1483a891a69d9972d5af59" kindref="member">determine_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="113" refid="class_two_center_1ac08ca04cfea84f1c816c7a1645389c6b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1ac08ca04cfea84f1c816c7a1645389c6b" kindref="member">get_acceleration_and_potential</ref>(<ref refid="class_component" kindref="compound">Component</ref>*);</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119" refid="class_two_center_1aed04abf7863ba4d9e7e059593f5cecdd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1aed04abf7863ba4d9e7e059593f5cecdd" kindref="member">mixture</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">*<sp/>p)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122" refid="class_two_center_1af6341c0c9211c12fc6980c2bee31f077" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1af6341c0c9211c12fc6980c2bee31f077" kindref="member">Cmixture</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*p)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0<sp/>-<sp/><ref refid="class_two_center_1aed04abf7863ba4d9e7e059593f5cecdd" kindref="member">mixture</ref>(p);<sp/>}</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="126" refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" kindref="member">RegisterComponent</ref>(<ref refid="class_component" kindref="compound">Component</ref><sp/>*c)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" kindref="member">component</ref><sp/>=<sp/>c;<sp/></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" kindref="member">exp_in</ref><sp/><sp/>-&gt;<sp/><ref refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" kindref="member">RegisterComponent</ref>(c);</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" kindref="member">exp_out</ref><sp/>-&gt;<sp/><ref refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" kindref="member">RegisterComponent</ref>(c);</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134" refid="class_two_center_1afc027c542932d0fb5c23365730c7a225" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1afc027c542932d0fb5c23365730c7a225" kindref="member">set_multistep_level</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>n)<sp/></highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" kindref="member">mlevel</ref><sp/>=<sp/>n;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" kindref="member">exp_in</ref><sp/><sp/>-&gt;<sp/><ref refid="class_two_center_1afc027c542932d0fb5c23365730c7a225" kindref="member">set_multistep_level</ref>(n);</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" kindref="member">exp_out</ref><sp/>-&gt;<sp/><ref refid="class_two_center_1afc027c542932d0fb5c23365730c7a225" kindref="member">set_multistep_level</ref>(n);</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="class_two_center_1a5d42adc520d7f5a7353ddd893990b5cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1a5d42adc520d7f5a7353ddd893990b5cd" kindref="member">multistep_update_begin</ref>()</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" kindref="member">exp_in</ref><sp/><sp/>-&gt;<sp/><ref refid="class_two_center_1a5d42adc520d7f5a7353ddd893990b5cd" kindref="member">multistep_update_begin</ref>();</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" kindref="member">exp_out</ref><sp/>-&gt;<sp/><ref refid="class_two_center_1a5d42adc520d7f5a7353ddd893990b5cd" kindref="member">multistep_update_begin</ref>();</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147" refid="class_two_center_1a9840bdb9f5c27ce8f2d7d57013dd0b0a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1a9840bdb9f5c27ce8f2d7d57013dd0b0a" kindref="member">multistep_update</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cur,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>next,<sp/><ref refid="class_component" kindref="compound">Component</ref>*<sp/>c,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">)<sp/></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" kindref="member">exp_in</ref><sp/><sp/>-&gt;<sp/><ref refid="class_two_center_1a9840bdb9f5c27ce8f2d7d57013dd0b0a" kindref="member">multistep_update</ref>(cur,<sp/>next,<sp/>c,<sp/>i,<sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" kindref="member">exp_out</ref><sp/>-&gt;<sp/><ref refid="class_two_center_1a9840bdb9f5c27ce8f2d7d57013dd0b0a" kindref="member">multistep_update</ref>(cur,<sp/>next,<sp/>c,<sp/>i,<sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153" refid="class_two_center_1ae6080a5f19f8c92a75579a2d90776bd7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1ae6080a5f19f8c92a75579a2d90776bd7" kindref="member">multistep_update_finish</ref>()</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" kindref="member">exp_in</ref><sp/><sp/>-&gt;<sp/><ref refid="class_two_center_1ae6080a5f19f8c92a75579a2d90776bd7" kindref="member">multistep_update_finish</ref>();</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" kindref="member">exp_out</ref><sp/>-&gt;<sp/><ref refid="class_two_center_1ae6080a5f19f8c92a75579a2d90776bd7" kindref="member">multistep_update_finish</ref>();</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_two_center_1ac3c9e0ae37c6e7aaab40e7cac2475a26" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1ac3c9e0ae37c6e7aaab40e7cac2475a26" kindref="member">multistep_reset</ref>()</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" kindref="member">exp_in</ref><sp/><sp/>-&gt;<sp/><ref refid="class_two_center_1ac3c9e0ae37c6e7aaab40e7cac2475a26" kindref="member">multistep_reset</ref>();</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" kindref="member">exp_out</ref><sp/>-&gt;<sp/><ref refid="class_two_center_1ac3c9e0ae37c6e7aaab40e7cac2475a26" kindref="member">multistep_reset</ref>();</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165" refid="class_two_center_1ac29938dc6a1d4c9af4f9166b9b04d249" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_two_center_1ac29938dc6a1d4c9af4f9166b9b04d249" kindref="member">multistep_debug</ref>()</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" kindref="member">exp_in</ref><sp/><sp/>-&gt;<sp/><ref refid="class_two_center_1ac29938dc6a1d4c9af4f9166b9b04d249" kindref="member">multistep_debug</ref>();</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" kindref="member">exp_out</ref><sp/>-&gt;<sp/><ref refid="class_two_center_1ac29938dc6a1d4c9af4f9166b9b04d249" kindref="member">multistep_debug</ref>();</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"></highlight></codeline>
-<codeline lineno="172"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_two_d_coefs_8_h.xml b/doxyxml/_two_d_coefs_8_h.xml
deleted file mode 100644
index 8e0a29b..0000000
--- a/doxyxml/_two_d_coefs_8_h.xml
+++ /dev/null
@@ -1,137 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_two_d_coefs_8_h" kind="file" language="C++">
-    <compoundname>TwoDCoefs.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">fstream</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">tuple</includes>
-    <includes local="no">cmath</includes>
-    <includes local="no">map</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/TwoDCoefs.H</label>
-        <link refid="_two_d_coefs_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
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-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="8">
-        <label>cmath</label>
-      </node>
-      <node id="4">
-        <label>fstream</label>
-      </node>
-      <node id="3">
-        <label>iomanip</label>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="9">
-        <label>map</label>
-      </node>
-      <node id="5">
-        <label>memory</label>
-      </node>
-      <node id="7">
-        <label>tuple</label>
-      </node>
-      <node id="6">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="struct_two_d_coefs_1_1_coefs" prot="public">TwoDCoefs::Coefs</innerclass>
-    <innerclass refid="class_two_d_coefs" prot="public">TwoDCoefs</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_TWOD_COEFS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_TWOD_COEFS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;tuple&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_two_d_coefs" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_two_d_coefs" kindref="compound">TwoDCoefs</ref></highlight></codeline>
-<codeline lineno="16"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_two_d_coefs_1ac49f9b42238f6b030ebb8729771127c9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_two_d_coefs_1ac49f9b42238f6b030ebb8729771127c9" kindref="member">DataPtr</ref><sp/><sp/>=<sp/>std::shared_ptr&lt;Eigen::MatrixXd&gt;;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="53"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_user_bar_8_h.xml b/doxyxml/_user_bar_8_h.xml
deleted file mode 100644
index ec0b292..0000000
--- a/doxyxml/_user_bar_8_h.xml
+++ /dev/null
@@ -1,486 +0,0 @@
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_UserBar_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_UserBar_H</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_user_disk_8_h.xml b/doxyxml/_user_disk_8_h.xml
deleted file mode 100644
index 0a83507..0000000
--- a/doxyxml/_user_disk_8_h.xml
+++ /dev/null
@@ -1,490 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_user_disk_8_h" kind="file" language="C++">
-    <compoundname>UserDisk.H</compoundname>
-    <includes local="no">Particle.H</includes>
-    <includes refid="_axisymmetric_basis_8_h" local="no">AxisymmetricBasis.H</includes>
-    <includes refid="_external_collection_8_h" local="no">ExternalCollection.H</includes>
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-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
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-        <childnode refid="24" relation="include">
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-        <link refid="_circular_8_h"/>
-        <childnode refid="24" relation="include">
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-      </node>
-      <node id="23">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="15" relation="include">
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-        <childnode refid="24" relation="include">
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-      <node id="45">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="42" relation="include">
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-        <childnode refid="46" relation="include">
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-      <node id="47">
-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="48" relation="include">
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-      </node>
-      <node id="40">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="38">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="34" relation="include">
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-        <label>YamlCheck.H</label>
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-        <label>header.H</label>
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-      <node id="26">
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-        <childnode refid="21" relation="include">
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-      <node id="39">
-        <label>localmpi.H</label>
-        <link refid="localmpi_8_h"/>
-        <childnode refid="21" relation="include">
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-        <childnode refid="34" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>AxisymmetricBasis.H</label>
-        <link refid="_axisymmetric_basis_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Basis.H</label>
-        <link refid="_basis_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
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-        <link refid="_component_8_h"/>
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-        <label>ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
-        <childnode refid="5" relation="include">
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-    <innerclass refid="class_user_disk" prot="public">UserDisk</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_UserDisk_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_UserDisk_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Particle.H&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;pot,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;fr,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;fz);</highlight></codeline>
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-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_user_halo_8_h.xml b/doxyxml/_user_halo_8_h.xml
deleted file mode 100644
index 381fe22..0000000
--- a/doxyxml/_user_halo_8_h.xml
+++ /dev/null
@@ -1,481 +0,0 @@
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-    <compoundname>UserHalo.H</compoundname>
-    <includes local="no">Particle.H</includes>
-    <includes refid="_axisymmetric_basis_8_h" local="no">AxisymmetricBasis.H</includes>
-    <includes refid="_external_collection_8_h" local="no">ExternalCollection.H</includes>
-    <incdepgraph>
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-      <node id="23">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="15" relation="include">
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-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="42" relation="include">
-        </childnode>
-        <childnode refid="46" relation="include">
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-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="34" relation="include">
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-        </childnode>
-        <childnode refid="48" relation="include">
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-      </node>
-      <node id="40">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="10" relation="include">
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-        </childnode>
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-      <node id="13">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
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-        <link refid="_timer_8_h"/>
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-        <label>header.H</label>
-        <link refid="header_8_h"/>
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-    </briefdescription>
-    <detaileddescription>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_UserHalo_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_UserHalo_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Particle.H&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="47"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
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diff --git a/doxyxml/_user_log_pot_8_h.xml b/doxyxml/_user_log_pot_8_h.xml
deleted file mode 100644
index 5c88b39..0000000
--- a/doxyxml/_user_log_pot_8_h.xml
+++ /dev/null
@@ -1,475 +0,0 @@
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-        <label>EXPException.H</label>
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-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="42" relation="include">
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-        <label>StringTok.H</label>
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diff --git a/doxyxml/_user_m_ndisk_8_h.xml b/doxyxml/_user_m_ndisk_8_h.xml
deleted file mode 100644
index 995a9d7..0000000
--- a/doxyxml/_user_m_ndisk_8_h.xml
+++ /dev/null
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_UserMNdisk_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_UserMNdisk_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Particle.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_axisymmetric_basis_8_h" kindref="compound">AxisymmetricBasis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_external_collection_8_h" kindref="compound">ExternalCollection.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
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diff --git a/doxyxml/_user_m_w_8_h.xml b/doxyxml/_user_m_w_8_h.xml
deleted file mode 100644
index 31db1f9..0000000
--- a/doxyxml/_user_m_w_8_h.xml
+++ /dev/null
@@ -1,586 +0,0 @@
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-        <label>localmpi.H</label>
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-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-        <childnode refid="49" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="50" relation="include">
-        </childnode>
-        <childnode refid="51" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="52" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-      </node>
-      <node id="18">
-        <label>ExternalCollection.H</label>
-        <link refid="_external_collection_8_h"/>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="53" relation="include">
-        </childnode>
-      </node>
-      <node id="53">
-        <label>ExternalForce.H</label>
-        <link refid="_external_force_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="41">
-        <label>Orient.H</label>
-        <link refid="_orient_8_h"/>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-        <childnode refid="43" relation="include">
-        </childnode>
-        <childnode refid="44" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="45" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="50">
-        <label>ParticleFerry.H</label>
-        <link refid="_particle_ferry_8_h"/>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel.H</label>
-        <link refid="_pot_accel_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="31">
-        <label>chkTimer.H</label>
-        <link refid="chk_timer_8_h"/>
-        <childnode refid="32" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
-        </childnode>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="35" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-      </node>
-      <node id="30">
-        <label>coef.H</label>
-        <link refid="src_2coef_8_h"/>
-      </node>
-      <node id="28">
-        <label>global.H</label>
-        <link refid="global_8_h"/>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="39" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/user/UserMW.H</label>
-        <link refid="_user_m_w_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="17">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="2">
-        <label>Particle.H</label>
-      </node>
-      <node id="43">
-        <label>algorithm</label>
-      </node>
-      <node id="46">
-        <label>array</label>
-      </node>
-      <node id="8">
-        <label>chrono</label>
-      </node>
-      <node id="33">
-        <label>cmath</label>
-      </node>
-      <node id="16">
-        <label>config_exp.h</label>
-      </node>
-      <node id="6">
-        <label>cstdlib</label>
-      </node>
-      <node id="42">
-        <label>deque</label>
-      </node>
-      <node id="35">
-        <label>fstream</label>
-      </node>
-      <node id="36">
-        <label>iomanip</label>
-      </node>
-      <node id="34">
-        <label>iostream</label>
-      </node>
-      <node id="9">
-        <label>list</label>
-      </node>
-      <node id="10">
-        <label>map</label>
-      </node>
-      <node id="11">
-        <label>memory</label>
-      </node>
-      <node id="21">
-        <label>mpi.h</label>
-      </node>
-      <node id="29">
-        <label>pthread.h</label>
-      </node>
-      <node id="27">
-        <label>random</label>
-      </node>
-      <node id="15">
-        <label>set</label>
-      </node>
-      <node id="25">
-        <label>sstream</label>
-      </node>
-      <node id="7">
-        <label>string</label>
-      </node>
-      <node id="32">
-        <label>time.h</label>
-      </node>
-      <node id="48">
-        <label>tuple</label>
-      </node>
-      <node id="22">
-        <label>utility</label>
-      </node>
-      <node id="24">
-        <label>vector</label>
-      </node>
-      <node id="12">
-        <label>yaml-cpp/yaml.h</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_user_m_w" prot="public">UserMW</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_UserMW_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_UserMW_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Particle.H&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_axisymmetric_basis_8_h" kindref="compound">AxisymmetricBasis.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_external_collection_8_h" kindref="compound">ExternalCollection.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_user_m_w" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_user_m_w" kindref="compound">UserMW</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_external_force" kindref="compound">ExternalForce</ref></highlight></codeline>
-<codeline lineno="32"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_user_m_w_1aca8723ca66f339d85c945d85803a019b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1aca8723ca66f339d85c945d85803a019b" kindref="member">ctr_name</ref>;</highlight></codeline>
-<codeline lineno="36" refid="class_user_m_w_1ac6365788f5d5a60665686fe0dac1f4d4" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component" kindref="compound">Component</ref><sp/>*<ref refid="class_user_m_w_1ac6365788f5d5a60665686fe0dac1f4d4" kindref="member">c0</ref>;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_user_m_w_1ac92e9fd5d8afd936cc9c8e38518a6f78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1ac92e9fd5d8afd936cc9c8e38518a6f78" kindref="member">determine_acceleration_and_potential</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="39" refid="class_user_m_w_1a4f99cd18a43e8cd2c7abc43ff82c6300" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/><ref refid="class_user_m_w_1a4f99cd18a43e8cd2c7abc43ff82c6300" kindref="member">determine_acceleration_and_potential_thread</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*<sp/>arg);</highlight></codeline>
-<codeline lineno="40" refid="class_user_m_w_1a40939e74cec9a7afbf18620cd3142c16" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a40939e74cec9a7afbf18620cd3142c16" kindref="member">initialize</ref>();</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>!!!define<sp/>all<sp/>variable<sp/>names<sp/>needed<sp/>here<sp/>with<sp/>their<sp/>types<sp/>!!!<sp/>Done</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_user_m_w_1a149bb4855e73f1d1fa6bf82b2c0783b5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>,<sp/><ref refid="class_user_m_w_1ae70b1a586a8944151e85c9a7b721810a" kindref="member">M_halo</ref>,<sp/><ref refid="class_user_m_w_1ad8cc11c009761b27c4ae9ecd453272d3" kindref="member">rs_halo</ref>,<sp/><ref refid="class_user_m_w_1ac38fa72377dac48905e2e42c845a2878" kindref="member">M_disk</ref>,<sp/><ref refid="class_user_m_w_1a149bb4855e73f1d1fa6bf82b2c0783b5" kindref="member">a_disk</ref>,<sp/><ref refid="class_user_m_w_1a098831e44a5fcb6fadeeb7b42c712bf1" kindref="member">b_disk</ref>,<sp/><ref refid="class_user_m_w_1a049aae30a64fbef142e9600d1ebbc523" kindref="member">M_nucl</ref>,<sp/><ref refid="class_user_m_w_1a2373ba2452bada9ce59d611d0263457c" kindref="member">c_nucl</ref>,<sp/><ref refid="class_user_m_w_1a6bddeab196fbedc8e0d354c7be951578" kindref="member">M_bulge</ref>,<sp/><ref refid="class_user_m_w_1a84c7750a14b813de910078a07df062cd" kindref="member">c_bulge</ref>;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_user_m_w_1adfbbe4faac90968505fe4c0ab819d9c1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1ab4a1b3ca9fa2bffbbce86bdd6bd80cd4" kindref="member">Ton</ref>,<sp/><ref refid="class_user_m_w_1a82122e8d53ea74d0c407fe5ad6de6750" kindref="member">Toff</ref>,<sp/><ref refid="class_user_m_w_1adfbbe4faac90968505fe4c0ab819d9c1" kindref="member">DeltaT</ref>;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_user_m_w_1a1805118217ebf6e57d5e912d46f5aacf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a1805118217ebf6e57d5e912d46f5aacf" kindref="member">name</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_user_m_w_1a3188683c655b8693f9a4a2a6df58e354" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a3188683c655b8693f9a4a2a6df58e354" kindref="member">userinfo</ref>();</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>!!!<sp/>define<sp/>necessary<sp/>force<sp/>definitions<sp/>here:<sp/>they<sp/>will<sp/>be<sp/>accessible<sp/>in<sp/>UserMW.cc<sp/>in<sp/>this<sp/>case<sp/>!!!<sp/>Done</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_user_m_w_1a17302063b0765bb624390951579c152a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a17302063b0765bb624390951579c152a" kindref="member">NFW_pot</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>phi<sp/>=<sp/><sp/>-(<ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1ae70b1a586a8944151e85c9a7b721810a" kindref="member">M_halo</ref>)/r<sp/>*<sp/>log(<sp/>1<sp/>+<sp/>(r/<ref refid="class_user_m_w_1ad8cc11c009761b27c4ae9ecd453272d3" kindref="member">rs_halo</ref>)<sp/>);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_user_m_w_1a21b8cf720840233747ed2297e1d847d7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a21b8cf720840233747ed2297e1d847d7" kindref="member">NFW_dphi_dr</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*ax1,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*ay1,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*az1)<sp/></highlight><highlight class="comment">//<sp/>Work<sp/>from<sp/>here</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dphi_dr,<sp/>r;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>r<sp/>=<sp/>sqrt(<sp/>pow(x,2)<sp/>+<sp/>pow(y,2)<sp/>);</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dphi_dr<sp/>=<sp/>(<ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1ae70b1a586a8944151e85c9a7b721810a" kindref="member">M_halo</ref>)/r<sp/>*<sp/>(log(<sp/>1<sp/>+<sp/>(r/<ref refid="class_user_m_w_1ad8cc11c009761b27c4ae9ecd453272d3" kindref="member">rs_halo</ref>)<sp/>)/r<sp/>-<sp/>(1/(<ref refid="class_user_m_w_1ad8cc11c009761b27c4ae9ecd453272d3" kindref="member">rs_halo</ref><sp/>+<sp/>r)));</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*ax1<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(x/r);</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*ay1<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(y/r);</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*az1<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(z/r);</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>return<sp/>dphi_dr,<sp/>ax,<sp/>ay,<sp/>az;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_user_m_w_1ad968f87cbbf91d8e4ceb209a39142915" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1ad968f87cbbf91d8e4ceb209a39142915" kindref="member">HN_nucl_pot</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>phi<sp/>=<sp/>-<ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1a049aae30a64fbef142e9600d1ebbc523" kindref="member">M_nucl</ref>/(r<sp/>+<sp/><ref refid="class_user_m_w_1a2373ba2452bada9ce59d611d0263457c" kindref="member">c_nucl</ref>);</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_user_m_w_1a781cdecf7cc74dc56dd4ac16adc1b0e0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a781cdecf7cc74dc56dd4ac16adc1b0e0" kindref="member">HN_nucl_dphi_dr</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*ax2,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*ay2,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*az2)</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dphi_dr,<sp/>r;</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>r<sp/>=<sp/>sqrt(<sp/>pow(x,2)<sp/>+<sp/>pow(y,2)<sp/>);</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dphi_dr<sp/>=<sp/><ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1a049aae30a64fbef142e9600d1ebbc523" kindref="member">M_nucl</ref>/pow<sp/>(<sp/>(r<sp/>+<sp/><ref refid="class_user_m_w_1a2373ba2452bada9ce59d611d0263457c" kindref="member">c_nucl</ref>),<sp/>2<sp/>);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*ax2<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(x/r);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*ay2<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(y/r);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*az2<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(z/r);</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>return<sp/>dphi_dr,<sp/>ax,<sp/>ay,<sp/>az;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_user_m_w_1a692911e9ad271ab4f219556795f20ad0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a692911e9ad271ab4f219556795f20ad0" kindref="member">HN_bulge_pot</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>phi<sp/>=<sp/>-<ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1a6bddeab196fbedc8e0d354c7be951578" kindref="member">M_bulge</ref>/(r<sp/>+<sp/><ref refid="class_user_m_w_1a84c7750a14b813de910078a07df062cd" kindref="member">c_bulge</ref>);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_user_m_w_1a47ccf1ed0396975fd1fd3f2ea123efd0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a47ccf1ed0396975fd1fd3f2ea123efd0" kindref="member">HN_bulge_dphi_dr</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*ax3,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*ay3,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*az3)</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dphi_dr,<sp/>r;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>r<sp/>=<sp/>sqrt(<sp/>pow(x,2)<sp/>+<sp/>pow(y,2)<sp/>);</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dphi_dr<sp/>=<sp/><ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1a6bddeab196fbedc8e0d354c7be951578" kindref="member">M_bulge</ref>/pow<sp/>(<sp/>(r<sp/>+<sp/><ref refid="class_user_m_w_1a84c7750a14b813de910078a07df062cd" kindref="member">c_bulge</ref>),<sp/>2<sp/>);</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*ax3<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(x/r);</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*ay3<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(y/r);</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*az3<sp/>=<sp/>-dphi_dr<sp/>*<sp/>(z/r);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>return<sp/>dphi_dr,<sp/>ax,<sp/>ay,<sp/>az;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115" refid="class_user_m_w_1a5feb563cf62a634ff2af27f5d00bf164" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a5feb563cf62a634ff2af27f5d00bf164" kindref="member">MN_pot</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>phi<sp/>=<sp/>(-<ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1ac38fa72377dac48905e2e42c845a2878" kindref="member">M_disk</ref>)/(sqrt(pow(<sp/>R,<sp/>2<sp/>)<sp/>+<sp/>pow(<sp/>(sqrt(pow(<sp/>z,<sp/>2)<sp/><sp/>+<sp/>pow(<sp/><ref refid="class_user_m_w_1a098831e44a5fcb6fadeeb7b42c712bf1" kindref="member">b_disk</ref>,<sp/>2<sp/>))<sp/>+<sp/><ref refid="class_user_m_w_1a149bb4855e73f1d1fa6bf82b2c0783b5" kindref="member">a_disk</ref>),<sp/>2<sp/>)));</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>phi;</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122" refid="class_user_m_w_1a65318392e5520910d7e1eeffd935dffd" refkind="member"><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_user_m_w_1a65318392e5520910d7e1eeffd935dffd" kindref="member">MN_dphi_dR_dz</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*ax4,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*ay4,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*az4)</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dphi_dR,<sp/>dphi_dz,<sp/>R;</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>R<sp/>=<sp/>sqrt(<sp/>pow(x,2)<sp/>+<sp/>pow(y,2)<sp/>+<sp/>pow(z,2)<sp/>);</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>n<sp/>=<sp/>3.0/2.0;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rstep3<sp/>=<sp/>sqrt(<sp/>pow(<ref refid="class_user_m_w_1a098831e44a5fcb6fadeeb7b42c712bf1" kindref="member">b_disk</ref>,2)<sp/>+<sp/>pow(z,2)<sp/>);</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rstep2<sp/>=<sp/>(<ref refid="class_user_m_w_1a149bb4855e73f1d1fa6bf82b2c0783b5" kindref="member">a_disk</ref><sp/>+<sp/>Rstep3);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rstep1<sp/>=<sp/>pow(R,2)<sp/>+<sp/>pow(Rstep2,<sp/>2);</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dphi_dR<sp/>=<sp/>(<ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1ac38fa72377dac48905e2e42c845a2878" kindref="member">M_disk</ref>*R)/pow(Rstep1,<sp/>n);</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zstep3<sp/>=<sp/>sqrt(<sp/>pow(<ref refid="class_user_m_w_1a098831e44a5fcb6fadeeb7b42c712bf1" kindref="member">b_disk</ref>,2)<sp/>+<sp/>pow(z,2)<sp/>);</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zstep2<sp/>=<sp/>(<ref refid="class_user_m_w_1a149bb4855e73f1d1fa6bf82b2c0783b5" kindref="member">a_disk</ref><sp/>+<sp/>zstep3);</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zstep1<sp/>=<sp/>pow(R,2)<sp/>+<sp/>pow(zstep2,<sp/>2);</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dphi_dz<sp/>=<sp/>((<ref refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" kindref="member">G</ref>*<ref refid="class_user_m_w_1ac38fa72377dac48905e2e42c845a2878" kindref="member">M_disk</ref>*z)*zstep2)/(zstep3*pow(zstep1,<sp/>n));</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*ax4<sp/>=<sp/>-dphi_dR<sp/>*<sp/>(x/R);</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*ay4<sp/>=<sp/>-dphi_dR<sp/>*<sp/>(y/R);</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>*az4<sp/>=<sp/>-dphi_dz;</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>return<sp/>dphi_dR,<sp/>dphi_dz,<sp/>ax,<sp/>ay,<sp/>az;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>double<sp/>MN_dphi_dz<sp/>(double<sp/>z,<sp/>double<sp/>R)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>{</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>double<sp/>dphi_dz;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>double<sp/>n<sp/>=<sp/>3.0/2.0;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>double<sp/>step3<sp/>=<sp/>sqrt(<sp/>pow(b_disk,2)<sp/>+<sp/>pow(z,2)<sp/>);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>double<sp/>step2<sp/>=<sp/>(a_disk<sp/>+<sp/>step3);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>double<sp/>step1<sp/>=<sp/>pow(R,2)<sp/>+<sp/>pow(step2,<sp/>2);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>dphi_dz<sp/>=<sp/>((G*M_disk*z)*step2)/(step3*pow(step1,<sp/>n));</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/><sp/>return<sp/>dphi_dz;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>}</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="155"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_user_m_w_1a4f0b05538c2a961be57ba9198b46e7e8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_user_m_w_1a4f0b05538c2a961be57ba9198b46e7e8" kindref="member">UserMW</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_user_m_w_1a92040b5c35cd75a774c1172d93bf2163" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_user_m_w_1a92040b5c35cd75a774c1172d93bf2163" kindref="member">~UserMW</ref>();</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="164"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_user_test_8_h.xml b/doxyxml/_user_test_8_h.xml
deleted file mode 100644
index 5923ece..0000000
--- a/doxyxml/_user_test_8_h.xml
+++ /dev/null
@@ -1,443 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_user_test_8_h" kind="file" language="C++">
-    <compoundname>UserTest.H</compoundname>
-    <includes refid="_external_collection_8_h" local="no">ExternalCollection.H</includes>
-    <incdepgraph>
-      <node id="27">
-        <label>BarrierWrapper.H</label>
-        <link refid="_barrier_wrapper_8_h"/>
-        <childnode refid="24" relation="include">
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-        <label>CenterFile.H</label>
-        <link refid="_center_file_8_h"/>
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-      <node id="50">
-        <label>Circular.H</label>
-        <link refid="_circular_8_h"/>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
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-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="39">
-        <label>PseudoAccel.H</label>
-        <link refid="_pseudo_accel_8_h"/>
-        <childnode refid="34" relation="include">
-        </childnode>
-        <childnode refid="40" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="41" relation="include">
-        </childnode>
-      </node>
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-        <label>QuadLS.H</label>
-        <link refid="_quad_l_s_8_h"/>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="42" relation="include">
-        </childnode>
-      </node>
-      <node id="32">
-        <label>Species.H</label>
-        <link refid="_species_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="48">
-        <label>StringTok.H</label>
-        <link refid="_string_tok_8_h"/>
-      </node>
-      <node id="28">
-        <label>Timer.H</label>
-        <link refid="_timer_8_h"/>
-        <childnode refid="24" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-      </node>
-      <node id="49">
-        <label>YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="13" relation="include">
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deleted file mode 100644
index e0519c0..0000000
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diff --git a/doxyxml/_vtk_grid_8_h.xml b/doxyxml/_vtk_grid_8_h.xml
deleted file mode 100644
index e959ea9..0000000
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-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" kindref="member">xmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" kindref="member">xmax</ref>,</highlight></codeline>
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-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" kindref="member">zmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" kindref="member">zmax</ref>);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1a0e17ff56b7dca22354e1ad12fc9a3136" kindref="member">Add</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;&amp;<sp/>data,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1ae022ee7d864ef6881bbbb3aef0206576" kindref="member">Write</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="61"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_three_d_grid_8_h" kindref="compound">ThreeDGrid.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_vtk_grid" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_vtk_grid" kindref="compound">VtkGrid</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid" kindref="compound">ThreeDGrid</ref></highlight></codeline>
-<codeline lineno="72"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Grid<sp/>coordinates</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_vtk_grid_1ae300942112ea90d812a2653fe0cd9aec" refkind="member"><highlight class="normal"><sp/><sp/>std::map&lt;std::string,<sp/>std::vector&lt;float&gt;&gt;<sp/><ref refid="class_vtk_grid_1ae300942112ea90d812a2653fe0cd9aec" kindref="member">coord</ref>;</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Dataset</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="class_vtk_grid_1abad75928c51c6bf0c464eeadf03d597a" refkind="member"><highlight class="normal"><sp/><sp/>std::map&lt;std::string,<sp/>std::vector&lt;float&gt;&gt;<sp/><ref refid="class_vtk_grid_1abad75928c51c6bf0c464eeadf03d597a" kindref="member">dataSet</ref>;</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Write<sp/>header</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="81" refid="class_vtk_grid_1a789c726c2bb7909ad95de0aa54f014a2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1a789c726c2bb7909ad95de0aa54f014a2" kindref="member">writeBeg</ref>(std::ofstream&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Write<sp/>footer</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_vtk_grid_1a10058ffeb1a7f382e76b02479c46fb66" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1a10058ffeb1a7f382e76b02479c46fb66" kindref="member">writeEnd</ref>(std::ofstream&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Write<sp/>scalar<sp/>fields</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_vtk_grid_1a1c1c025cb74ee75b3e25daf0bf2cb602" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1a1c1c025cb74ee75b3e25daf0bf2cb602" kindref="member">writeFields</ref>(std::ofstream&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Write<sp/>coordinates</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="90" refid="class_vtk_grid_1ad9f1ca0d08187c00222b0709aa0d56a8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1ad9f1ca0d08187c00222b0709aa0d56a8" kindref="member">writeCoords</ref>(std::ofstream&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>String<sp/>replacement<sp/>utility</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_vtk_grid_1a9c422744acdfd23375ceadba52bf0ade" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1a9c422744acdfd23375ceadba52bf0ade" kindref="member">replaceAll</ref>(std::string&amp;<sp/>str,</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>from,</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>to);</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="99" refid="class_vtk_grid_1a708cc3f68c13e7e532f89cec61dbbf38" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_vtk_grid_1a708cc3f68c13e7e532f89cec61dbbf38" kindref="member">VtkGrid</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" kindref="member">nx</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" kindref="member">ny</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" kindref="member">nz</ref>,</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" kindref="member">xmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" kindref="member">xmax</ref>,</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" kindref="member">ymin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" kindref="member">ymax</ref>,</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" kindref="member">zmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" kindref="member">zmax</ref>);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_vtk_grid_1a0e17ff56b7dca22354e1ad12fc9a3136" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1a0e17ff56b7dca22354e1ad12fc9a3136" kindref="member">Add</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;&amp;<sp/>data,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_vtk_grid_1ae022ee7d864ef6881bbbb3aef0206576" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_grid_1ae022ee7d864ef6881bbbb3aef0206576" kindref="member">Write</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="109"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113" refid="_vtk_grid_8_h_1a20f2c07f70da9cf1ffb11aa4a2ea2abf" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;VtkGrid&gt;<sp/><ref refid="_vtk_grid_8_h_1a20f2c07f70da9cf1ffb11aa4a2ea2abf" kindref="member">VtkGridPtr</ref>;</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/VtkGrid.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_vtk_p_c_a_8_h.xml b/doxyxml/_vtk_p_c_a_8_h.xml
deleted file mode 100644
index d5f8fe7..0000000
--- a/doxyxml/_vtk_p_c_a_8_h.xml
+++ /dev/null
@@ -1,239 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_vtk_p_c_a_8_h" kind="file" language="C++">
-    <compoundname>VtkPCA.H</compoundname>
-    <includes local="no">sstream</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes local="no">vtkSmartPointer.h</includes>
-    <includes local="no">vtkDoubleArray.h</includes>
-    <includes local="no">vtkFloatArray.h</includes>
-    <includes local="no">vtkIntArray.h</includes>
-    <includes local="no">vtkUnsignedCharArray.h</includes>
-    <includes local="no">vtkStructuredPoints.h</includes>
-    <includes local="no">vtkRectilinearGrid.h</includes>
-    <includes local="no">vtkPoints.h</includes>
-    <includes local="no">vtkPointData.h</includes>
-    <includes local="no">vtkXMLRectilinearGridWriter.h</includes>
-    <includes local="no">vtkLookupTable.h</includes>
-    <includes local="no">vtkVersion.h</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/VtkPCA.H</label>
-        <link refid="_vtk_p_c_a_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
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-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="3">
-        <label>memory</label>
-      </node>
-      <node id="2">
-        <label>sstream</label>
-      </node>
-      <node id="6">
-        <label>vtkDoubleArray.h</label>
-      </node>
-      <node id="7">
-        <label>vtkFloatArray.h</label>
-      </node>
-      <node id="8">
-        <label>vtkIntArray.h</label>
-      </node>
-      <node id="15">
-        <label>vtkLookupTable.h</label>
-      </node>
-      <node id="13">
-        <label>vtkPointData.h</label>
-      </node>
-      <node id="12">
-        <label>vtkPoints.h</label>
-      </node>
-      <node id="11">
-        <label>vtkRectilinearGrid.h</label>
-      </node>
-      <node id="5">
-        <label>vtkSmartPointer.h</label>
-      </node>
-      <node id="10">
-        <label>vtkStructuredPoints.h</label>
-      </node>
-      <node id="9">
-        <label>vtkUnsignedCharArray.h</label>
-      </node>
-      <node id="16">
-        <label>vtkVersion.h</label>
-      </node>
-      <node id="14">
-        <label>vtkXMLRectilinearGridWriter.h</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_vtk_p_c_a" prot="public">VtkPCA</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="_vtk_p_c_a_8_h_1a91ec4adb62732a5e935da8cd519eedca" prot="public" static="no">
-        <type>vtkSmartPointer&lt; vtkFloatArray &gt;</type>
-        <definition>using vtkFloatArrayP =  vtkSmartPointer&lt;vtkFloatArray&gt;</definition>
-        <argsstring></argsstring>
-        <name>vtkFloatArrayP</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="26" column="1" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="26" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="_vtk_p_c_a_8_h_1aa7364d1e65fb6365be7704dee40fd967" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_vtk_p_c_a" kindref="compound">VtkPCA</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;VtkPCA&gt; VtkPCAptr</definition>
-        <argsstring></argsstring>
-        <name>VtkPCAptr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="77" column="25" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="77" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="_vtk_p_c_a_8_h_1a79cd2d149302154311ed7385f5e7c637" prot="public" static="no">
-        <type>vtkSmartPointer&lt; vtkRectilinearGrid &gt;</type>
-        <definition>using vtkRectilinearGridP =  vtkSmartPointer&lt;vtkRectilinearGrid&gt;</definition>
-        <argsstring></argsstring>
-        <name>vtkRectilinearGridP</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="24" column="1" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="24" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="_vtk_p_c_a_8_h_1ada74476e196a46e70aaa8f099f4136d6" prot="public" static="no">
-        <type>vtkSmartPointer&lt; vtkXMLRectilinearGridWriter &gt;</type>
-        <definition>using vtkRectilinearGridWriterP =  vtkSmartPointer&lt;vtkXMLRectilinearGridWriter&gt;</definition>
-        <argsstring></argsstring>
-        <name>vtkRectilinearGridWriterP</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="25" column="1" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="25" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_VtkPCA_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_VtkPCA_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;sstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="comment">//<sp/>VTK<sp/>stuff</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkSmartPointer.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkDoubleArray.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkFloatArray.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkIntArray.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkUnsignedCharArray.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkStructuredPoints.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkRectilinearGrid.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkPoints.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkPointData.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkXMLRectilinearGridWriter.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkLookupTable.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vtkVersion.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="_vtk_p_c_a_8_h_1a79cd2d149302154311ed7385f5e7c637" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="_vtk_p_c_a_8_h_1a79cd2d149302154311ed7385f5e7c637" kindref="member">vtkRectilinearGridP</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>vtkSmartPointer&lt;vtkRectilinearGrid&gt;;</highlight></codeline>
-<codeline lineno="25" refid="_vtk_p_c_a_8_h_1ada74476e196a46e70aaa8f099f4136d6" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="_vtk_p_c_a_8_h_1ada74476e196a46e70aaa8f099f4136d6" kindref="member">vtkRectilinearGridWriterP</ref><sp/>=<sp/>vtkSmartPointer&lt;vtkXMLRectilinearGridWriter&gt;;</highlight></codeline>
-<codeline lineno="26" refid="_vtk_p_c_a_8_h_1a91ec4adb62732a5e935da8cd519eedca" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="_vtk_p_c_a_8_h_1a91ec4adb62732a5e935da8cd519eedca" kindref="member">vtkFloatArrayP</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>vtkSmartPointer&lt;vtkFloatArray&gt;;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_vtk_p_c_a" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_vtk_p_c_a" kindref="compound">VtkPCA</ref></highlight></codeline>
-<codeline lineno="29"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="31" refid="class_vtk_p_c_a_1a8e13bbdbb04ea956d8514a559964447b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_vtk_p_c_a_1a8e13bbdbb04ea956d8514a559964447b" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Knots</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_vtk_p_c_a_1ad911f39deea5ed996a6f1cfdf6eb1de0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_vtk_p_c_a_8_h_1a91ec4adb62732a5e935da8cd519eedca" kindref="member">vtkFloatArrayP</ref><sp/><ref refid="class_vtk_p_c_a_1ad911f39deea5ed996a6f1cfdf6eb1de0" kindref="member">XX</ref>,<sp/><ref refid="class_vtk_p_c_a_1a3f20f2da79dd81719ef200177de0bcc5" kindref="member">YY</ref>,<sp/><ref refid="class_vtk_p_c_a_1a0a064267f75edf03f0b1445b2bd78f58" kindref="member">ZZ</ref>;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Fields</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_vtk_p_c_a_1a3c052b1682c2652bc67b2abb8e2966f9" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;vtkFloatArrayP&gt;<sp/><ref refid="class_vtk_p_c_a_1a3c052b1682c2652bc67b2abb8e2966f9" kindref="member">coef</ref>,<sp/><ref refid="class_vtk_p_c_a_1aea0050b4ffee839446dcca6db24cdd5a" kindref="member">hall</ref>,<sp/><ref refid="class_vtk_p_c_a_1a4ab2e59898e7b08c5617c89b8aa45b0b" kindref="member">eval</ref>,<sp/><ref refid="class_vtk_p_c_a_1a524e77563003b220502c69780fe10365" kindref="member">snrv</ref>,<sp/><ref refid="class_vtk_p_c_a_1a476dac75711ab454b7de6f96f54881db" kindref="member">vecs</ref>,<sp/><ref refid="class_vtk_p_c_a_1af9aa2a7137688d618d19b5e12f58744c" kindref="member">vec2</ref>,<sp/><ref refid="class_vtk_p_c_a_1ada851bd4911ed7e3c2b69bbfd8f67f19" kindref="member">covr</ref>;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Labels</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_vtk_p_c_a_1abafaa3454c68c75a2a5b953e06a99c7c" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::string&gt;<sp/><sp/><sp/><sp/><ref refid="class_vtk_p_c_a_1abafaa3454c68c75a2a5b953e06a99c7c" kindref="member">elab</ref>;</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Dataset</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_vtk_p_c_a_1adf0630702b2d1ba4e3844b9975d57394" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_vtk_p_c_a_8_h_1a79cd2d149302154311ed7385f5e7c637" kindref="member">vtkRectilinearGridP</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_vtk_p_c_a_1adf0630702b2d1ba4e3844b9975d57394" kindref="member">dataSet</ref>;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Save<sp/>smoothed<sp/>basis</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_vtk_p_c_a_1a78ec19a3be1ba9f610f2739a4de4c5ef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_vtk_p_c_a_1a78ec19a3be1ba9f610f2739a4de4c5ef" kindref="member">smooth</ref>;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Rorder<sp/>by<sp/>S/N</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_vtk_p_c_a_1a29622983a8eaa1f6e479255cc4844fb7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_vtk_p_c_a_1a29622983a8eaa1f6e479255cc4844fb7" kindref="member">reorder</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="53" refid="class_vtk_p_c_a_1a6cb1a01c132517df484042012c20c0a0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_vtk_p_c_a_1a6cb1a01c132517df484042012c20c0a0" kindref="member">VtkPCA</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_vtk_p_c_a_1a29622983a8eaa1f6e479255cc4844fb7" kindref="member">reorder</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_vtk_p_c_a_1a78ec19a3be1ba9f610f2739a4de4c5ef" kindref="member">smooth</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_vtk_p_c_a_1af6d36246eafb57e753b018424a10a04a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_p_c_a_1af6d36246eafb57e753b018424a10a04a" kindref="member">Add</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_vtk_p_c_a_1a3c052b1682c2652bc67b2abb8e2966f9" kindref="member">coef</ref>,</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_vtk_p_c_a_1aea0050b4ffee839446dcca6db24cdd5a" kindref="member">hall</ref>,</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>snr,</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_vtk_p_c_a_1a4ab2e59898e7b08c5617c89b8aa45b0b" kindref="member">eval</ref>,</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::MatrixXd&amp;<sp/>evec,</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::MatrixXd&amp;<sp/><ref refid="class_vtk_p_c_a_1ada851bd4911ed7e3c2b69bbfd8f67f19" kindref="member">covr</ref>,</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m);</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_vtk_p_c_a_1ad42aa1abf8a2af689257d82870a8d36e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_p_c_a_1ad42aa1abf8a2af689257d82870a8d36e" kindref="member">Add</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_vtk_p_c_a_1a3c052b1682c2652bc67b2abb8e2966f9" kindref="member">coef</ref>,</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_vtk_p_c_a_1aea0050b4ffee839446dcca6db24cdd5a" kindref="member">hall</ref>,</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>snr,</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_vtk_p_c_a_1a4ab2e59898e7b08c5617c89b8aa45b0b" kindref="member">eval</ref>,</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::MatrixXd&amp;<sp/>evec,</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::MatrixXd&amp;<sp/><ref refid="class_vtk_p_c_a_1ada851bd4911ed7e3c2b69bbfd8f67f19" kindref="member">covr</ref>,</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m);</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="74" refid="class_vtk_p_c_a_1a7bd7eb05e3b1389a80a40b20052b9d8a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_vtk_p_c_a_1a7bd7eb05e3b1389a80a40b20052b9d8a" kindref="member">Write</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="_vtk_p_c_a_8_h_1aa7364d1e65fb6365be7704dee40fd967" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;VtkPCA&gt;<sp/><ref refid="_vtk_p_c_a_8_h_1aa7364d1e65fb6365be7704dee40fd967" kindref="member">VtkPCAptr</ref>;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_yaml_check_8_h.xml b/doxyxml/_yaml_check_8_h.xml
deleted file mode 100644
index 3b865f1..0000000
--- a/doxyxml/_yaml_check_8_h.xml
+++ /dev/null
@@ -1,352 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_yaml_check_8_h" kind="file" language="C++">
-    <compoundname>YamlCheck.H</compoundname>
-    <includes local="no">string</includes>
-    <includes local="no">set</includes>
-    <includes local="no">yaml-cpp/yaml.h</includes>
-    <includedby refid="_pot_accel_8_h" local="no">/home/weinberg/Projects/EXP/src/PotAccel.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>set</label>
-      </node>
-      <node id="2">
-        <label>string</label>
-      </node>
-      <node id="4">
-        <label>yaml-cpp/yaml.h</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/YamlCheck.H</label>
-        <link refid="_yaml_check_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H</label>
-        <link refid="_axisymmetric_basis_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/src/Basis.H</label>
-        <link refid="_basis_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>/home/weinberg/Projects/EXP/src/Bessel.H</label>
-        <link refid="_bessel_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/src/CBDisk.H</label>
-        <link refid="_c_b_disk_8_h"/>
-      </node>
-      <node id="25">
-        <label>/home/weinberg/Projects/EXP/src/Component.H</label>
-        <link refid="_component_8_h"/>
-        <childnode refid="26" relation="include">
-        </childnode>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="35" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
-        </childnode>
-        <childnode refid="37" relation="include">
-        </childnode>
-        <childnode refid="38" relation="include">
-        </childnode>
-      </node>
-      <node id="26">
-        <label>/home/weinberg/Projects/EXP/src/ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-      </node>
-      <node id="39">
-        <label>/home/weinberg/Projects/EXP/src/Cube.H</label>
-        <link refid="_cube_8_h"/>
-      </node>
-      <node id="30">
-        <label>/home/weinberg/Projects/EXP/src/CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="24" relation="include">
-        </childnode>
-      </node>
-      <node id="23">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="24">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/Direct.H</label>
-        <link refid="_direct_8_h"/>
-      </node>
-      <node id="14">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="27">
-        <label>/home/weinberg/Projects/EXP/src/ExternalCollection.H</label>
-        <link refid="_external_collection_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="22" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-      </node>
-      <node id="31">
-        <label>/home/weinberg/Projects/EXP/src/ExternalForce.H</label>
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diff --git a/doxyxml/_yaml_config_8_h.xml b/doxyxml/_yaml_config_8_h.xml
deleted file mode 100644
index b4ac274..0000000
--- a/doxyxml/_yaml_config_8_h.xml
+++ /dev/null
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-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/>groups={</highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">},</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Parameters<sp/>to<sp/>exclude</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;<sp/>exclude={</highlight><highlight class="stringliteral">&quot;help&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;template&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;expert&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;config&quot;</highlight><highlight class="normal">});</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><ref refid="classcxxopts_1_1_parse_result" kindref="compound">cxxopts::ParseResult</ref><sp/><ref refid="_yaml_config_8_h_1a4b6bc508ca919bbf0106b9e052494e7d" kindref="member">LoadConfig</ref>(<ref refid="classcxxopts_1_1_options" kindref="compound">cxxopts::Options</ref>&amp;<sp/>options,</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>config);</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/YamlConfig.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/_z_brent_8_h.xml b/doxyxml/_z_brent_8_h.xml
deleted file mode 100644
index 420a7ff..0000000
--- a/doxyxml/_z_brent_8_h.xml
+++ /dev/null
@@ -1,208 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="_z_brent_8_h" kind="file" language="C++">
-    <compoundname>ZBrent.H</compoundname>
-    <includes local="no">math.h</includes>
-    <includes local="no">functional</includes>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">vector</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/ZBrent.H</label>
-        <link refid="_z_brent_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>functional</label>
-      </node>
-      <node id="5">
-        <label>iomanip</label>
-      </node>
-      <node id="4">
-        <label>iostream</label>
-      </node>
-      <node id="2">
-        <label>math.h</label>
-      </node>
-      <node id="6">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_z_brent" prot="public">ZBrent</innerclass>
-    <sectiondef kind="enum">
-      <memberdef kind="enum" id="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93" prot="public" static="no" strong="no">
-        <type></type>
-        <name>ZBrentReturn</name>
-        <enumvalue id="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93aa9e10f610083e262e7aa4004c9b68fe9" prot="public">
-          <name>Good</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93a269c13c2affa9b7cff07a4aa1e9c5f2e" prot="public">
-          <name>Bracket</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93ad99cee9bc75fdda19c9973426672e410" prot="public">
-          <name>Iteration</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ZBrent.H" line="10" column="1" bodyfile="/home/weinberg/Projects/EXP/include/ZBrent.H" bodystart="10" bodyend="14"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#include<sp/>&lt;math.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">std;</highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;functional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93" kindref="member">ZBrentReturn</ref><sp/>{</highlight></codeline>
-<codeline lineno="11" refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93aa9e10f610083e262e7aa4004c9b68fe9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93aa9e10f610083e262e7aa4004c9b68fe9" kindref="member">Good</ref>,<sp/></highlight></codeline>
-<codeline lineno="12" refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93a269c13c2affa9b7cff07a4aa1e9c5f2e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93a269c13c2affa9b7cff07a4aa1e9c5f2e" kindref="member">Bracket</ref>,<sp/></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93ad99cee9bc75fdda19c9973426672e410" kindref="member">Iteration</ref></highlight></codeline>
-<codeline lineno="14" refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93ad99cee9bc75fdda19c9973426672e410" refkind="member"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="17" refid="class_z_brent" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_z_brent" kindref="compound">ZBrent</ref><sp/></highlight></codeline>
-<codeline lineno="18"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="19" refid="class_z_brent_1a10af6ea5ce242942973c6f33e22b0b54" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="class_z_brent_1a10af6ea5ce242942973c6f33e22b0b54" kindref="member">func_T</ref><sp/>=<sp/>std::function&lt;double(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>T&amp;)&gt;;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="22" refid="class_z_brent_1a61d4ec528e5044386c5e998bd82f2c44" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_z_brent_1a61d4ec528e5044386c5e998bd82f2c44" kindref="member">ITMAX</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_z_brent_1a49d441d34dcbbe7cba34c5809d442819" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_z_brent_1a49d441d34dcbbe7cba34c5809d442819" kindref="member">EPS</ref>;</highlight></codeline>
-<codeline lineno="24" refid="class_z_brent_1a451559430cf79b261c6eb354690eea41" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_z_brent_1a451559430cf79b261c6eb354690eea41" kindref="member">epsilon</ref>;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_z_brent_1a06ed750f92022929c60ff960b6b5ecde" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_z_brent_1a06ed750f92022929c60ff960b6b5ecde" kindref="member">ZBrent</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93" kindref="member">ZBrentReturn</ref><sp/><ref refid="class_z_brent_1a865d518a616320d31a5b82ab8c93bbb0" kindref="member">find</ref>(<ref refid="class_z_brent_1a10af6ea5ce242942973c6f33e22b0b54" kindref="member">func_T</ref><sp/>func,<sp/>T&amp;<sp/>param,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>tol,</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>result);</highlight></codeline>
-<codeline lineno="29"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_z_brent" kindref="compound">ZBrent&lt;T&gt;::ITMAX</ref>=100;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_z_brent" kindref="compound">ZBrent&lt;T&gt;::EPS</ref>=1.0e-16;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_z_brent" kindref="compound">ZBrent&lt;T&gt;::epsilon</ref>=1.0e-3;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93" kindref="member">ZBrentReturn</ref></highlight></codeline>
-<codeline lineno="38" refid="class_z_brent_1a865d518a616320d31a5b82ab8c93bbb0" refkind="member"><highlight class="normal"><ref refid="class_z_brent_1a865d518a616320d31a5b82ab8c93bbb0" kindref="member">ZBrent&lt;T&gt;::find</ref>(<ref refid="class_z_brent_1a10af6ea5ce242942973c6f33e22b0b54" kindref="member">func_T</ref><sp/>func,<sp/>T&amp;<sp/>param,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>tol,</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>result)</highlight></codeline>
-<codeline lineno="40"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>a=x1,<sp/>b=x2,<sp/>c=0.0,<sp/>d=0.0,<sp/>e=0.0,<sp/>min1,<sp/>min2;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fc,<sp/>p,<sp/>q,<sp/>r,<sp/>s,<sp/>tol1,<sp/>xm;</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fa=func(a,<sp/>param);</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fb=func(b,<sp/>param);</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fb*fa<sp/>&gt;<sp/>0.0)<sp/>{</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(a<sp/>&gt;<sp/>b)<sp/>{</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>a<sp/>*=<sp/>(1+epsilon);</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>*=<sp/>(1-epsilon);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>a<sp/>*=<sp/>(1-epsilon);</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>*=<sp/>(1+epsilon);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/>fa=func(a,<sp/>param);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/>fb=func(b,<sp/>param);</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fb*fa<sp/>&gt;<sp/>0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93a269c13c2affa9b7cff07a4aa1e9c5f2e" kindref="member">Bracket</ref>;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/>fc<sp/>=<sp/>fb;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>c<sp/>=<sp/>b;</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>iter=1;<sp/>iter&lt;=ITMAX;<sp/>iter++)<sp/>{</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fb*fc<sp/>&gt;<sp/>0.0)<sp/>{</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>c<sp/><sp/>=<sp/>a;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>fc<sp/>=<sp/>fa;</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>e<sp/><sp/>=<sp/>d<sp/>=<sp/>b-a;</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fabs(fc)<sp/>&lt;<sp/>fabs(fb))<sp/>{</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>a<sp/><sp/>=<sp/>b;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/><sp/>=<sp/>c;</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>c<sp/><sp/>=<sp/>a;</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>fa<sp/>=<sp/>fb;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>fb<sp/>=<sp/>fc;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>fc<sp/>=<sp/>fa;</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/>tol1<sp/>=<sp/>2.0*EPS*fabs(b)+0.5*tol;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/>xm<sp/>=<sp/>0.5*(c<sp/>-<sp/>b);</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fabs(xm)<sp/>&lt;=<sp/>tol1<sp/>||<sp/>fb<sp/>==<sp/>0.0)<sp/>{</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/><sp/>b;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93aa9e10f610083e262e7aa4004c9b68fe9" kindref="member">Good</ref>;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fabs(e)<sp/>&gt;=<sp/>tol1<sp/>&amp;&amp;<sp/>fabs(fa)<sp/>&gt;<sp/>fabs(fb))<sp/>{</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>s<sp/>=<sp/>fb/fa;</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(a<sp/>==<sp/>c)<sp/>{</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>p<sp/>=<sp/>2.0*xm*s;</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>q<sp/>=<sp/>1.0<sp/>-<sp/>s;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>q<sp/>=<sp/>fa/fc;</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>r<sp/>=<sp/>fb/fc;</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>p<sp/>=<sp/>s*(2.0*xm*q*(q-r)-(b-a)*(r-1.0));</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>q<sp/>=<sp/>(q-1.0)*(r-1.0)*(s-1.0);</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(p<sp/>&gt;<sp/>0.0)<sp/><sp/>q<sp/>=<sp/>-q;</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>p<sp/>=<sp/>fabs(p);</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>min1<sp/>=<sp/>3.0*xm*q-fabs(tol1*q);</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>min2<sp/>=<sp/>fabs(e*q);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(2.0*p<sp/>&lt;<sp/>(min1<sp/>&lt;<sp/>min2<sp/>?<sp/>min1<sp/>:<sp/>min2))<sp/>{</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>e<sp/>=<sp/>d;</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>d<sp/>=<sp/>p/q;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>d<sp/>=<sp/>xm;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>e<sp/>=<sp/>d;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>d<sp/>=<sp/>xm;</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>e<sp/>=<sp/>d;</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/>a<sp/>=<sp/>b;</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/>fa<sp/>=<sp/>fb;</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fabs(d)<sp/>&gt;<sp/>tol1)</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>+=<sp/>d;</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>b<sp/>+=<sp/>(xm<sp/>&gt;<sp/>0.0<sp/>?<sp/>fabs(tol1)<sp/>:<sp/>-fabs(tol1));</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/>fb<sp/>=<sp/>func(b,<sp/>param);</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="_z_brent_8_h_1afed7781c1ff415e0185b4847de0fce93ad99cee9bc75fdda19c9973426672e410" kindref="member">Iteration</ref>;</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/ZBrent.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/atomic__constants_8_h.xml b/doxyxml/atomic__constants_8_h.xml
deleted file mode 100644
index 9360828..0000000
--- a/doxyxml/atomic__constants_8_h.xml
+++ /dev/null
@@ -1,302 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="atomic__constants_8_h" kind="file" language="C++">
-    <compoundname>atomic_constants.H</compoundname>
-    <sectiondef kind="var">
-      <memberdef kind="variable" id="atomic__constants_8_h_1ac42a625d0a097d9cc45331eaf17a8d3f" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double a0</definition>
-        <argsstring></argsstring>
-        <name>a0</name>
-        <initializer>= 0.052917721092e-7</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="38" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a0595e59a9bf296545e5ab563066df679" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double amu</definition>
-        <argsstring></argsstring>
-        <name>amu</name>
-        <initializer>= 1.660539e-24</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="29" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a9f8cf3ad8595f06f9c662e645bae8349" prot="public" static="no" mutable="no">
-        <type>const std::vector&lt; double &gt;</type>
-        <definition>const std::vector&lt;double&gt; atomic_mass</definition>
-        <argsstring></argsstring>
-        <name>atomic_mass</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="47" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="47" bodyend="77"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1ac1ba1896d632c93d2ee9897af8ab4789" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double boltz</definition>
-        <argsstring></argsstring>
-        <name>boltz</name>
-        <initializer>= 1.3806504e-16</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="17" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="17" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1ae73224f8c67c5b57e99d31208f761b59" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double boltzEv</definition>
-        <argsstring></argsstring>
-        <name>boltzEv</name>
-        <initializer>= 8.6173324e-5</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="20" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1ae828647f4b283a206d4f5dd59c9b89b4" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double esu</definition>
-        <argsstring></argsstring>
-        <name>esu</name>
-        <initializer>= 4.80320427e-10</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="26" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="26" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a87b385f118e3715860117a77eda7136d" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double eV</definition>
-        <argsstring></argsstring>
-        <name>eV</name>
-        <initializer>=  1.60217653e-12</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="14" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="14" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a10b4d25ebe7f5ac310c30d3b4feeee79" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double light</definition>
-        <argsstring></argsstring>
-        <name>light</name>
-        <initializer>=  2.99792458e+10</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="11" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="11" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a910e2c8f86d1b5103b0326aa65670e52" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double me</definition>
-        <argsstring></argsstring>
-        <name>me</name>
-        <initializer>=  9.10938291e-28</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="8" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="8" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a9ced09dc26992ca1ecf1204e3065099a" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double mec2</definition>
-        <argsstring></argsstring>
-        <name>mec2</name>
-        <initializer>= 0.51099891013</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="32" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a6b331c08a80ed71d31c55a3341776483" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double mp</definition>
-        <argsstring></argsstring>
-        <name>mp</name>
-        <initializer>= 1.67262158e-24</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="5" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="5" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1ae6fb5b5557b5c558bfb81dcc23827075" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double msun</definition>
-        <argsstring></argsstring>
-        <name>msun</name>
-        <initializer>= 1.9891e33</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="44" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a2884cd030c4c825754349a525a1d06ce" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double pc</definition>
-        <argsstring></argsstring>
-        <name>pc</name>
-        <initializer>= 3.08567758e18</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="35" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a14c90d71ef3e38b32f3b313bec6d27d2" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double planck</definition>
-        <argsstring></argsstring>
-        <name>planck</name>
-        <initializer>= 6.626075540e-27</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="23" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="atomic__constants_8_h_1a4a2720a2f376e829b62e45fbbe6233bd" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double year</definition>
-        <argsstring></argsstring>
-        <name>year</name>
-        <initializer>= 365.242*24*3600</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" line="41" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_atomic_constants_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_atomic_constants_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Proton<sp/>mass<sp/>(g)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5" refid="atomic__constants_8_h_1a6b331c08a80ed71d31c55a3341776483" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a6b331c08a80ed71d31c55a3341776483" kindref="member">mp</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>1.67262158e-24;</highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Electron<sp/>mass<sp/>(g)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8" refid="atomic__constants_8_h_1a910e2c8f86d1b5103b0326aa65670e52" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a910e2c8f86d1b5103b0326aa65670e52" kindref="member">me</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/><sp/>9.10938291e-28;</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Speed<sp/>of<sp/>light<sp/>(cm/s)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="atomic__constants_8_h_1a10b4d25ebe7f5ac310c30d3b4feeee79" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a10b4d25ebe7f5ac310c30d3b4feeee79" kindref="member">light</ref><sp/><sp/><sp/><sp/><sp/>=<sp/><sp/>2.99792458e+10;</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="comment">//<sp/>electron<sp/>volt<sp/>in<sp/>(cgs)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="atomic__constants_8_h_1a87b385f118e3715860117a77eda7136d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a87b385f118e3715860117a77eda7136d" kindref="member">eV</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/><sp/>1.60217653e-12;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Boltzmann<sp/>constant<sp/>(cgs)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="atomic__constants_8_h_1ac1ba1896d632c93d2ee9897af8ab4789" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1ac1ba1896d632c93d2ee9897af8ab4789" kindref="member">boltz</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>1.3806504e-16;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Boltzmann<sp/>constant<sp/>(eV)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="atomic__constants_8_h_1ae73224f8c67c5b57e99d31208f761b59" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1ae73224f8c67c5b57e99d31208f761b59" kindref="member">boltzEv</ref><sp/><sp/><sp/>=<sp/>8.6173324e-5;</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Planck&apos;s<sp/>constant<sp/>(cgs)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="atomic__constants_8_h_1a14c90d71ef3e38b32f3b313bec6d27d2" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a14c90d71ef3e38b32f3b313bec6d27d2" kindref="member">planck</ref><sp/><sp/><sp/><sp/>=<sp/>6.626075540e-27;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Electron<sp/>charge<sp/>(cgs)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="atomic__constants_8_h_1ae828647f4b283a206d4f5dd59c9b89b4" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1ae828647f4b283a206d4f5dd59c9b89b4" kindref="member">esu</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>4.80320427e-10;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Atomic<sp/>mass<sp/>unit<sp/>in<sp/>grams</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="atomic__constants_8_h_1a0595e59a9bf296545e5ab563066df679" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a0595e59a9bf296545e5ab563066df679" kindref="member">amu</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>1.660539e-24;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Electron<sp/>rest<sp/>mass<sp/>in<sp/>MeV</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="atomic__constants_8_h_1a9ced09dc26992ca1ecf1204e3065099a" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a9ced09dc26992ca1ecf1204e3065099a" kindref="member">mec2</ref><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>0.51099891013;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Parsec<sp/>(cm)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="atomic__constants_8_h_1a2884cd030c4c825754349a525a1d06ce" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a2884cd030c4c825754349a525a1d06ce" kindref="member">pc</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>3.08567758e18;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Bohr<sp/>radius<sp/>(cm)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="atomic__constants_8_h_1ac42a625d0a097d9cc45331eaf17a8d3f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1ac42a625d0a097d9cc45331eaf17a8d3f" kindref="member">a0</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>0.052917721092e-7;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Year<sp/>(sec)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="atomic__constants_8_h_1a4a2720a2f376e829b62e45fbbe6233bd" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1a4a2720a2f376e829b62e45fbbe6233bd" kindref="member">year</ref><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>365.242*24*3600;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Solar<sp/>mass<sp/>(g)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="atomic__constants_8_h_1ae6fb5b5557b5c558bfb81dcc23827075" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="atomic__constants_8_h_1ae6fb5b5557b5c558bfb81dcc23827075" kindref="member">msun</ref><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>1.9891e33;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Atomic<sp/>masses</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="atomic__constants_8_h_1a9f8cf3ad8595f06f9c662e645bae8349" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;<sp/><ref refid="atomic__constants_8_h_1a9f8cf3ad8595f06f9c662e645bae8349" kindref="member">atomic_mass</ref><sp/>=<sp/>{0.000549,<sp/><sp/></highlight><highlight class="comment">//<sp/>0<sp/><sp/>electron</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>1.00797,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>1<sp/><sp/>H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>4.00260,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>2<sp/><sp/>He</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>6.941,<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>3<sp/><sp/>Li</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>9.01218,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>4<sp/><sp/>Be</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>10.81,<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>5<sp/><sp/>B</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>12.011,<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>6<sp/><sp/>C</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>14.0067,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>7<sp/><sp/>N</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>15.9994,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>8<sp/><sp/>O</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>18.998403,<sp/></highlight><highlight class="comment">//<sp/>9<sp/><sp/>F</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>20.179,<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>10<sp/>Ne</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>22.98977,<sp/><sp/></highlight><highlight class="comment">//<sp/>11<sp/>Na</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>24.305,<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>12<sp/>Mg</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>26.98154,<sp/><sp/></highlight><highlight class="comment">//<sp/>13<sp/>Al</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>28.0855,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>14<sp/>Si</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>30.97376,<sp/><sp/></highlight><highlight class="comment">//<sp/>15<sp/>P</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>32.06,<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>16<sp/>S</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>35.453,<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>17<sp/>Cl</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>39.948,<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>18<sp/>Ar</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>39.0983,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>19<sp/>K</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>40.08,<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>20<sp/>Ca</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>44.9559,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>21<sp/>Sc</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>47.90,<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>22<sp/>Ti</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>50.9415,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>23<sp/>V</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>51.996,<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>24<sp/>Cr</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>54.9380,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>25<sp/>Mn</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>55.847,<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>26<sp/>Fe</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>58.9332,<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>27<sp/>Co</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>58.70,<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>28<sp/>Ni</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>63.546,<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>29<sp/>Cu</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>65.38<sp/>};<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>30<sp/>Zn</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/atomic_constants.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/biorth1d_8_h.xml b/doxyxml/biorth1d_8_h.xml
deleted file mode 100644
index 21ac532..0000000
--- a/doxyxml/biorth1d_8_h.xml
+++ /dev/null
@@ -1,188 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="biorth1d_8_h" kind="file" language="C++">
-    <compoundname>biorth1d.H</compoundname>
-    <includes local="no">cmath</includes>
-    <includes refid="biorth_8_h" local="no">biorth.H</includes>
-    <includedby refid="_slab_s_l_8_h" local="no">/home/weinberg/Projects/EXP/src/SlabSL.H</includedby>
-    <incdepgraph>
-      <node id="3">
-        <label>biorth.H</label>
-        <link refid="biorth_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/biorth1d.H</label>
-        <link refid="biorth1d_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="2">
-        <label>cmath</label>
-      </node>
-      <node id="6">
-        <label>cstdlib</label>
-      </node>
-      <node id="5">
-        <label>iomanip</label>
-      </node>
-      <node id="4">
-        <label>iostream</label>
-      </node>
-      <node id="8">
-        <label>memory</label>
-      </node>
-      <node id="7">
-        <label>string</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/biorth1d.H</label>
-        <link refid="biorth1d_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/src/SlabSL.H</label>
-        <link refid="_slab_s_l_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_one_d_biorth" prot="public">OneDBiorth</innerclass>
-    <innerclass refid="class_one_d_trig" prot="public">OneDTrig</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>Biorthnormal<sp/>function<sp/>class<sp/>defintion<sp/>for<sp/>1-d<sp/>models</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_biorth1d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_biorth1d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="biorth_8_h" kindref="compound">biorth.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>USE_DMALLOC</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;dmalloc.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_one_d_biorth" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_one_d_biorth" kindref="compound">OneDBiorth</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_biorth" kindref="compound">Biorth</ref></highlight></codeline>
-<codeline lineno="16"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18" refid="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" kindref="member">dof</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="22" refid="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" kindref="member">kx</ref>;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="class_one_d_biorth_1a9a6ab640327a3176156ba1185285972b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_one_d_biorth_1a9a6ab640327a3176156ba1185285972b" kindref="member">OneDBiorth</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<ref refid="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" kindref="member">dof</ref><sp/>=<sp/>1;}</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_one_d_biorth_1a29e8b3603be9cf51b2ac0e0597fd9194" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a29e8b3603be9cf51b2ac0e0597fd9194" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_one_d_biorth_1a7ce54ca54b7d1fdebebfc9d33d8899e5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a7ce54ca54b7d1fdebebfc9d33d8899e5" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Fast<sp/>for<sp/>expansion!<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>(using<sp/>recursion<sp/>relation)</highlight></codeline>
-<codeline lineno="36" refid="class_one_d_biorth_1afe2e38095f8f845c2d3a2d15baef5f2e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1afe2e38095f8f845c2d3a2d15baef5f2e" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="38" refid="class_one_d_biorth_1ae93f7afbc1cea06e48e52776dba8f8db" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1ae93f7afbc1cea06e48e52776dba8f8db" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_one_d_biorth_1a40b62743370db78cfb34961324b17e7f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a40b62743370db78cfb34961324b17e7f" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="43" refid="class_one_d_biorth_1a4ec842bc4c47aa4d5a976ab9defdd227" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a4ec842bc4c47aa4d5a976ab9defdd227" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="45" refid="class_one_d_biorth_1a717ed674c0b38e64c8ddb49f93f75ee5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a717ed674c0b38e64c8ddb49f93f75ee5" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_one_d_biorth_1ae46ca1a70ee9e8bcfbaed70ffbaad258" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1ae46ca1a70ee9e8bcfbaed70ffbaad258" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="50" refid="class_one_d_biorth_1ae8644eb78f3064b06b8dfc457c35587c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1ae8644eb78f3064b06b8dfc457c35587c" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_one_d_biorth_1a492850ea00b9899b4e6b0609058d4798" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a492850ea00b9899b4e6b0609058d4798" kindref="member">get_dof</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" kindref="member">dof</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_one_d_biorth_1a9830ba054b67c3d937cfb1a589280dbd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a9830ba054b67c3d937cfb1a589280dbd" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/>Eigen::VectorXd&amp;<sp/>coef)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_one_d_biorth_1ad6f2ecad8488030f0014c76f08ebb9c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1ad6f2ecad8488030f0014c76f08ebb9c8" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/>Eigen::VectorXd&amp;<sp/>coef)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_one_d_biorth_1a56bae6b72ea0f8610148ace0fe9cc1e5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a56bae6b72ea0f8610148ace0fe9cc1e5" kindref="member">reset_kx</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>KX)<sp/>{<sp/><ref refid="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" kindref="member">kx</ref><sp/>=<sp/>KX;<sp/>}</highlight></codeline>
-<codeline lineno="63"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_one_d_trig" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_one_d_trig" kindref="compound">OneDTrig</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth" kindref="compound">OneDBiorth</ref></highlight></codeline>
-<codeline lineno="67"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="69" refid="class_one_d_trig_1af54ca2800edd3d6f37947eedc82e5b9a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1af54ca2800edd3d6f37947eedc82e5b9a" kindref="member">zmax</ref>;</highlight></codeline>
-<codeline lineno="70" refid="class_one_d_trig_1a85c72d31cfbbc15cb26764c91ce2c98d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a85c72d31cfbbc15cb26764c91ce2c98d" kindref="member">nrmax</ref>;</highlight></codeline>
-<codeline lineno="71" refid="class_one_d_trig_1a8da612ad8591e3691d76cf4e075377c5" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_one_d_trig_1a8da612ad8591e3691d76cf4e075377c5" kindref="member">kstar</ref>;</highlight></codeline>
-<codeline lineno="72" refid="class_one_d_trig_1ab2b00dbd4549468867e1fca91b447402" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_one_d_trig_1ab2b00dbd4549468867e1fca91b447402" kindref="member">kbstar</ref>;</highlight></codeline>
-<codeline lineno="73" refid="class_one_d_trig_1a84d8f38355ae31f82f23b32ad4556273" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_one_d_trig_1a84d8f38355ae31f82f23b32ad4556273" kindref="member">cnorm</ref>;</highlight></codeline>
-<codeline lineno="74" refid="class_one_d_trig_1a8ccd656b950f516f0c332fdd6dd4c326" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a8ccd656b950f516f0c332fdd6dd4c326" kindref="member">compute_kstar</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="75" refid="class_one_d_trig_1a57e74bc56fa6fce37126e7e982e6810a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a57e74bc56fa6fce37126e7e982e6810a" kindref="member">compute_norm</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="79" refid="class_one_d_trig_1a6ae4302558d448f659ec72e9d9a1ff82" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a6ae4302558d448f659ec72e9d9a1ff82" kindref="member">KSTOL</ref>;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_one_d_trig_1ab16221dba5b6efadd6b5cb78431cfbed" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1ab16221dba5b6efadd6b5cb78431cfbed" kindref="member">KSZTOL</ref>;</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="85" refid="class_one_d_trig_1a144a07e79ca2f4c7c77953c84fe9ca44" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_one_d_trig_1a144a07e79ca2f4c7c77953c84fe9ca44" kindref="member">OneDTrig</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_one_d_trig_1abcdec9acb2b9cb1c7c67cd983a635d1e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_one_d_trig_1abcdec9acb2b9cb1c7c67cd983a635d1e" kindref="member">OneDTrig</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" kindref="member">kx</ref>);</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_one_d_trig_1a334f263fccfba76f3f64c11873bc869c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_one_d_trig_1a334f263fccfba76f3f64c11873bc869c" kindref="member">OneDTrig</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" kindref="member">kx</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ZMAX);</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94" refid="class_one_d_trig_1a93bc2f6100b8807addabd68b97c09522" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a93bc2f6100b8807addabd68b97c09522" kindref="member">reset</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>KX,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ZMAX);</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
-<codeline lineno="97" refid="class_one_d_trig_1a250a1bbe08ff11c6c84174f152b3c4bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a250a1bbe08ff11c6c84174f152b3c4bc" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tmp,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_one_d_trig_1a87f04d45ce73f86b46ccd5bdd588995c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a87f04d45ce73f86b46ccd5bdd588995c" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tmp,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103" refid="class_one_d_trig_1a419ec201c2dea8528cfbbfe00b37cd9f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a419ec201c2dea8528cfbbfe00b37cd9f" kindref="member">force</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tmp,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Fast<sp/>for<sp/>expansion!<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>(using<sp/>recursion<sp/>relation)</highlight></codeline>
-<codeline lineno="108" refid="class_one_d_trig_1abe39f657af1bcac087459abef1896771" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1abe39f657af1bcac087459abef1896771" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tmp,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::VectorXd&amp;<sp/>vec);</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_one_d_trig_1a708a816fd858746e7a0678559d708cb4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a708a816fd858746e7a0678559d708cb4" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tmp,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::VectorXd&amp;<sp/>vec);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="114" refid="class_one_d_trig_1a2a97b229da816e9a601f4e125bad3f36" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a2a97b229da816e9a601f4e125bad3f36" kindref="member">force</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>tmp,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/>Eigen::VectorXd&amp;<sp/>vec);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117" refid="class_one_d_trig_1ace41f6c3a124efa6cf66503a61fe4744" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1ace41f6c3a124efa6cf66503a61fe4744" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>x)<sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>x;<sp/>}</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120" refid="class_one_d_trig_1a419be6419b012e0ce639ba6846ce64b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a419be6419b012e0ce639ba6846ce64b9" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>x)<sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>x;<sp/>}</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123" refid="class_one_d_trig_1a817e19c77d92480bbc23e7075a77f3bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a817e19c77d92480bbc23e7075a77f3bb" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>x)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126" refid="class_one_d_trig_1a76826d3ef15f01cc682fc262fa20f626" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a76826d3ef15f01cc682fc262fa20f626" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_one_d_trig_1af54ca2800edd3d6f37947eedc82e5b9a" kindref="member">zmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129" refid="class_one_d_trig_1a742687e9dce7bc39caf319c680062c8c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a742687e9dce7bc39caf319c680062c8c" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1af54ca2800edd3d6f37947eedc82e5b9a" kindref="member">zmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"></highlight></codeline>
-<codeline lineno="132" refid="class_one_d_trig_1a59373b367c6c4d2765689ffecd94cbcb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a59373b367c6c4d2765689ffecd94cbcb" kindref="member">krnl</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135" refid="class_one_d_trig_1a2185b5d71ebe7a8f9863c7f833dfb7ba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a2185b5d71ebe7a8f9863c7f833dfb7ba" kindref="member">norm</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>k=0)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"></highlight></codeline>
-<codeline lineno="138" refid="class_one_d_trig_1a675aa26eb078cd958c7df931cbd3a389" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a675aa26eb078cd958c7df931cbd3a389" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/>Eigen::VectorXd&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="class_one_d_trig_1a6fa91945fa5bf0d1d58057b991a8b3b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1a6fa91945fa5bf0d1d58057b991a8b3b0" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/>Eigen::VectorXd&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="144" refid="class_one_d_trig_1ae739f0f717dd99659f65e62d8dac9863" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_trig_1ae739f0f717dd99659f65e62d8dac9863" kindref="member">get_force</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/>Eigen::VectorXd&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="146"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight></codeline>
-<codeline lineno="150"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/biorth1d.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/biorth2d_8_h.xml b/doxyxml/biorth2d_8_h.xml
deleted file mode 100644
index fe69b39..0000000
--- a/doxyxml/biorth2d_8_h.xml
+++ /dev/null
@@ -1,195 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="biorth2d_8_h" kind="file" language="C++">
-    <compoundname>biorth2d.H</compoundname>
-    <includes local="no">string</includes>
-    <includes refid="biorth_8_h" local="no">biorth.H</includes>
-    <incdepgraph>
-      <node id="3">
-        <label>biorth.H</label>
-        <link refid="biorth_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/biorth2d.H</label>
-        <link refid="biorth2d_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="6">
-        <label>cstdlib</label>
-      </node>
-      <node id="5">
-        <label>iomanip</label>
-      </node>
-      <node id="4">
-        <label>iostream</label>
-      </node>
-      <node id="7">
-        <label>memory</label>
-      </node>
-      <node id="2">
-        <label>string</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_b_s_disk" prot="public">BSDisk</innerclass>
-    <innerclass refid="class_c_b_disk" prot="public">CBDisk</innerclass>
-    <sectiondef kind="enum">
-      <memberdef kind="enum" id="biorth2d_8_h_1a918a93b7be8449a8b820cc82340628f8" prot="public" static="no" strong="no">
-        <type></type>
-        <name>BiorthFcts2d</name>
-        <enumvalue id="biorth2d_8_h_1a918a93b7be8449a8b820cc82340628f8ac6ce3ae0bf0f8e7c7c2c15ce97366b1d" prot="public">
-          <name>clutton_brock_2d</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="biorth2d_8_h_1a918a93b7be8449a8b820cc82340628f8af1ef0ed1259e7dd1bf3fe1b8908d231d" prot="public">
-          <name>bessel_2d</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="104" column="1" bodyfile="/home/weinberg/Projects/EXP/include/biorth2d.H" bodystart="104" bodyend="104"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>This<sp/>may<sp/>look<sp/>like<sp/>C<sp/>code,<sp/>but<sp/>it<sp/>is<sp/>really<sp/>-*-<sp/>C++<sp/>-*-</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Biorthnormal<sp/>function<sp/>class<sp/>defintion</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_biorth2d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_biorth2d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="biorth_8_h" kindref="compound">biorth.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref>;</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="class_c_b_disk" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_c_b_disk" kindref="compound">CBDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref></highlight></codeline>
-<codeline lineno="15"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17" refid="class_c_b_disk_1a5e62923bdfde1d582f2daf2484fc7de4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a5e62923bdfde1d582f2daf2484fc7de4" kindref="member">numz</ref>;</highlight></codeline>
-<codeline lineno="18" refid="class_c_b_disk_1ae0ed415245ad56ca9857fc9f8f663eac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1ae0ed415245ad56ca9857fc9f8f663eac" kindref="member">phif</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_c_b_disk_1a44ba475f7449a1b4890c48b6cf434f93" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_b_disk_1a44ba475f7449a1b4890c48b6cf434f93" kindref="member">CBDisk</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="27" refid="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="28" refid="class_c_b_disk_1a0f1296ba29fdfedbd51b4331820c514a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a0f1296ba29fdfedbd51b4331820c514a" kindref="member">krnl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;}</highlight></codeline>
-<codeline lineno="29" refid="class_c_b_disk_1a20a66684834ce4eb9ecf61e3d2eebf28" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a20a66684834ce4eb9ecf61e3d2eebf28" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m);</highlight></codeline>
-<codeline lineno="30" refid="class_c_b_disk_1a679f542434214c22c85d47178e0fdd12" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a679f542434214c22c85d47178e0fdd12" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>a);</highlight></codeline>
-<codeline lineno="31" refid="class_c_b_disk_1a7367cfa5968af0036f19681c640f64bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a7367cfa5968af0036f19681c640f64bb" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>a);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Supplemental<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_c_b_disk_1abfe35d6748b8413206eecca684657510" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1abfe35d6748b8413206eecca684657510" kindref="member">potlR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae" kindref="member">potl</ref>(n,<sp/>m,<sp/>r);<sp/>}</highlight></codeline>
-<codeline lineno="38" refid="class_c_b_disk_1a1b27ba7f86b77c8480404201ad31be5e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a1b27ba7f86b77c8480404201ad31be5e" kindref="member">densR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4" kindref="member">dens</ref>(n,<sp/>m,<sp/>r);<sp/>}</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_c_b_disk_1af5743acce055d23034dde1d460142827" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1af5743acce055d23034dde1d460142827" kindref="member">potlRZ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="42" refid="class_c_b_disk_1a1160213d2f102a628b7d0ffbd1923279" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a1160213d2f102a628b7d0ffbd1923279" kindref="member">set_numz</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/><ref refid="class_c_b_disk_1a5e62923bdfde1d582f2daf2484fc7de4" kindref="member">numz</ref><sp/>=<sp/>n;}</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_c_b_disk_1ad60036a7c84e1d8f1e19ef315c8e5eff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1ad60036a7c84e1d8f1e19ef315c8e5eff" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;}</highlight></codeline>
-<codeline lineno="45" refid="class_c_b_disk_1a7b2573edfceba78c6085161c4be303ab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a7b2573edfceba78c6085161c4be303ab" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;}</highlight></codeline>
-<codeline lineno="46" refid="class_c_b_disk_1a9c18f2ff0bb31ab91e09fed0d3a164b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1a9c18f2ff0bb31ab91e09fed0d3a164b3" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;}</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_c_b_disk_1aeefbbc5e3a2ca01af2078cd8400f5606" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1aeefbbc5e3a2ca01af2078cd8400f5606" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="49" refid="class_c_b_disk_1af244ab399c5394cd56597d8732c29916" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_disk_1af244ab399c5394cd56597d8732c29916" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0e30;<sp/>}</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_b_s_disk" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_b_s_disk" kindref="compound">BSDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref></highlight></codeline>
-<codeline lineno="57"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="59" refid="class_b_s_disk_1a2ff683abaf541a9b36e95713ca4aca9d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a2ff683abaf541a9b36e95713ca4aca9d" kindref="member">numz</ref>;</highlight></codeline>
-<codeline lineno="60" refid="class_b_s_disk_1ac55e4aa3b03c489519c7f9305d162d00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a322ac1ed6bbc6e78324946e8b06d8cd5" kindref="member">nmax</ref>,<sp/><ref refid="class_b_s_disk_1ac55e4aa3b03c489519c7f9305d162d00" kindref="member">mmax</ref>;</highlight></codeline>
-<codeline lineno="61" refid="class_b_s_disk_1a4b2493e04e8d8d87e3e439a72873dee1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a4b2493e04e8d8d87e3e439a72873dee1" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63" refid="class_b_s_disk_1a032dbad8da9ba7318ebe92f13f45906d" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_b_s_disk_1a032dbad8da9ba7318ebe92f13f45906d" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_b_s_disk_1a9e542c6f442ac97b771f91c1f39319b9" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_b_s_disk_1a9e542c6f442ac97b771f91c1f39319b9" kindref="member">t_f</ref>,<sp/><ref refid="class_b_s_disk_1a75e584142efcd1eb2359a20d39bd5976" kindref="member">t_y</ref>;</highlight></codeline>
-<codeline lineno="66" refid="class_b_s_disk_1a47e5d002abfebd24fa49c8e396494258" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_b_s_disk_1a47e5d002abfebd24fa49c8e396494258" kindref="member">t_dr</ref>;</highlight></codeline>
-<codeline lineno="67" refid="class_b_s_disk_1a189a3c20d7a464329a8c108f7827876e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a189a3c20d7a464329a8c108f7827876e" kindref="member">t_n</ref>;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_b_s_disk_1a07204c6de90cbf3bdfdbdbdbd6d4d79b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a07204c6de90cbf3bdfdbdbdbd6d4d79b" kindref="member">setup_potl_table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73" refid="class_b_s_disk_1aba2421e2ae137d195659981dce82ddeb" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_b_s_disk_1aba2421e2ae137d195659981dce82ddeb" kindref="member">BSDisk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NMAX,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>MMAX);</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_b_s_disk_1ab564d4f5d73eb29573554bc1d923154f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_b_s_disk_1ab564d4f5d73eb29573554bc1d923154f" kindref="member">~BSDisk</ref>();</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="class_b_s_disk_1a176472b6fa88fe5307bd2d9835c22cc9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a176472b6fa88fe5307bd2d9835c22cc9" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="79" refid="class_b_s_disk_1a04a5bc7ae5e418394ebf7b3ba4492b85" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a04a5bc7ae5e418394ebf7b3ba4492b85" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="80" refid="class_b_s_disk_1a5d87fd4b4515d7c8e7c9a8296f3d270e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a5d87fd4b4515d7c8e7c9a8296f3d270e" kindref="member">krnl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;}</highlight></codeline>
-<codeline lineno="81" refid="class_b_s_disk_1a529f799a87348c6f4f3ac47972194f54" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a529f799a87348c6f4f3ac47972194f54" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m);</highlight></codeline>
-<codeline lineno="82" refid="class_b_s_disk_1aa4c16e34587f360b1ddf03d3a53828a1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1aa4c16e34587f360b1ddf03d3a53828a1" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_b_s_disk_1a032dbad8da9ba7318ebe92f13f45906d" kindref="member">a</ref>);</highlight></codeline>
-<codeline lineno="83" refid="class_b_s_disk_1ae7896e0832f51233e30c419228e105ef" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1ae7896e0832f51233e30c419228e105ef" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/><ref refid="class_b_s_disk_1a032dbad8da9ba7318ebe92f13f45906d" kindref="member">a</ref>);</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Supplemental<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_b_s_disk_1a1dd23fdeb570114b89487070b38e9370" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a1dd23fdeb570114b89487070b38e9370" kindref="member">potlR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a176472b6fa88fe5307bd2d9835c22cc9" kindref="member">potl</ref>(n,<sp/>m,<sp/>r);<sp/>}</highlight></codeline>
-<codeline lineno="90" refid="class_b_s_disk_1a30d16e1b4ccc9f90613989c121739c70" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a30d16e1b4ccc9f90613989c121739c70" kindref="member">densR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a04a5bc7ae5e418394ebf7b3ba4492b85" kindref="member">dens</ref>(n,<sp/>m,<sp/>r);<sp/>}</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_b_s_disk_1a9925619abb620d0266b0c015997253d4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a9925619abb620d0266b0c015997253d4" kindref="member">potlRZ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_b_s_disk_1af996ebef3ef60b1c15a9e3f97db4a427" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1af996ebef3ef60b1c15a9e3f97db4a427" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;}</highlight></codeline>
-<codeline lineno="96" refid="class_b_s_disk_1afefe9914f9a1a2106ed2488054b172ca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1afefe9914f9a1a2106ed2488054b172ca" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;}</highlight></codeline>
-<codeline lineno="97" refid="class_b_s_disk_1a58cad23005f4dbd36e2ac2b307b4d464" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a58cad23005f4dbd36e2ac2b307b4d464" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;}</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_b_s_disk_1a30cc2dcd5a418aa9930df28b54aa79c6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a30cc2dcd5a418aa9930df28b54aa79c6" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="100" refid="class_b_s_disk_1ae740485f16b8b4058f8fedb3b0ebd9e2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1ae740485f16b8b4058f8fedb3b0ebd9e2" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_b_s_disk_1a4b2493e04e8d8d87e3e439a72873dee1" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104" refid="biorth2d_8_h_1a918a93b7be8449a8b820cc82340628f8af1ef0ed1259e7dd1bf3fe1b8908d231d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="biorth2d_8_h_1a918a93b7be8449a8b820cc82340628f8" kindref="member">BiorthFcts2d</ref><sp/>{<ref refid="biorth2d_8_h_1a918a93b7be8449a8b820cc82340628f8ac6ce3ae0bf0f8e7c7c2c15ce97366b1d" kindref="member">clutton_brock_2d</ref>,<sp/><ref refid="biorth2d_8_h_1a918a93b7be8449a8b820cc82340628f8af1ef0ed1259e7dd1bf3fe1b8908d231d" kindref="member">bessel_2d</ref>};</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight><highlight class="comment">//<sp/>static<sp/>const<sp/>char*<sp/>BiorthFcts2dName[]<sp/>=<sp/>{&quot;CBDisk&quot;,<sp/>&quot;BSDisk&quot;};</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/biorth2d.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/biorth_8_h.xml b/doxyxml/biorth_8_h.xml
deleted file mode 100644
index 3d0a4e9..0000000
--- a/doxyxml/biorth_8_h.xml
+++ /dev/null
@@ -1,563 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="biorth_8_h" kind="file" language="C++">
-    <compoundname>biorth.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">cstdlib</includes>
-    <includes local="no">string</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includedby refid="biorth1d_8_h" local="no">/home/weinberg/Projects/EXP/include/biorth1d.H</includedby>
-    <includedby refid="biorth2d_8_h" local="no">/home/weinberg/Projects/EXP/include/biorth2d.H</includedby>
-    <includedby refid="biorth__wake_8_h" local="no">/home/weinberg/Projects/EXP/include/biorth_wake.H</includedby>
-    <includedby refid="sphere_s_l_8_h" local="no">/home/weinberg/Projects/EXP/include/sphereSL.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/biorth.H</label>
-        <link refid="biorth_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="4">
-        <label>cstdlib</label>
-      </node>
-      <node id="3">
-        <label>iomanip</label>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="6">
-        <label>memory</label>
-      </node>
-      <node id="5">
-        <label>string</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/biorth.H</label>
-        <link refid="biorth_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/biorth1d.H</label>
-        <link refid="biorth1d_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/include/biorth2d.H</label>
-        <link refid="biorth2d_8_h"/>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/include/biorth_wake.H</label>
-        <link refid="biorth__wake_8_h"/>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/include/sphereSL.H</label>
-        <link refid="sphere_s_l_8_h"/>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/src/SlabSL.H</label>
-        <link refid="_slab_s_l_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_axi_sym_biorth" prot="public">AxiSymBiorth</innerclass>
-    <innerclass refid="class_biorth" prot="public">Biorth</innerclass>
-    <innerclass refid="class_biorth_grid" prot="public">BiorthGrid</innerclass>
-    <innerclass refid="class_b_s_sphere" prot="public">BSSphere</innerclass>
-    <innerclass refid="class_c_b_sphere" prot="public">CBSphere</innerclass>
-    <innerclass refid="class_h_q_sphere" prot="public">HQSphere</innerclass>
-    <sectiondef kind="enum">
-      <memberdef kind="enum" id="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77a" prot="public" static="no" strong="no">
-        <type></type>
-        <name>BiorthFcts3d</name>
-        <enumvalue id="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aa750b3d98ea0866a01b86f76b69bdada4" prot="public">
-          <name>bessel</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aa40dfd50bb32e4cbe1bf99fd2d5c4178f" prot="public">
-          <name>clutton_brock</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aa2152559d6a29a11bf6a18674390defb7" prot="public">
-          <name>hernquist</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aab9f6d1ce6accee067d448bc541b53607" prot="public">
-          <name>sturm</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="285" column="1" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="285" bodyend="285"/>
-      </memberdef>
-      <memberdef kind="enum" id="biorth_8_h_1afc6e90026099c08093d2dba767548f3c" prot="public" static="no" strong="no">
-        <type></type>
-        <name>ScalarType</name>
-        <enumvalue id="biorth_8_h_1afc6e90026099c08093d2dba767548f3ca22ebfd60994ac594c00a8e367372d092" prot="public">
-          <name>density</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="biorth_8_h_1afc6e90026099c08093d2dba767548f3ca3411cb34f943955f072e60575ed46756" prot="public">
-          <name>potential</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="282" column="1" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="282" bodyend="282"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="biorth_8_h_1ac8c5ffffdeb6883b8e13706095e0b31f" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt; AxiSymBiorth &gt; AxiSymBioPtr</definition>
-        <argsstring></argsstring>
-        <name>AxiSymBioPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="79" column="25" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="79" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="var">
-      <memberdef kind="variable" id="biorth_8_h_1ae53bd1dcac6d0c4595385922e1a9e158" prot="public" static="yes" mutable="no">
-        <type>std::string</type>
-        <definition>std::string BiorthFcts3dName[]</definition>
-        <argsstring>[]</argsstring>
-        <name>BiorthFcts3dName</name>
-        <initializer>= {&quot;BSSphere&quot;, &quot;CBSphere&quot;, &quot;HQSphere&quot;, &quot;SphereSL&quot;}</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="293" column="20" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="293" bodyend="293"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="biorth_8_h_1a2840b42a4e647b40323cfec376a28a07" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd scalar_prod</definition>
-        <argsstring>(ScalarType type, double rmin, double rmax, int l, int m, AxiSymBiorth &amp;s, std::function&lt; double(double, int, int)&gt; func, int nc, int ng)</argsstring>
-        <name>scalar_prod</name>
-        <param>
-          <type><ref refid="biorth_8_h_1afc6e90026099c08093d2dba767548f3c" kindref="member">ScalarType</ref></type>
-          <declname>type</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref> &amp;</type>
-          <declname>s</declname>
-        </param>
-        <param>
-          <type>std::function&lt; double(double, int, int)&gt;</type>
-          <declname>func</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nc</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ng</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="287" column="17" declfile="/home/weinberg/Projects/EXP/include/biorth.H" declline="287" declcolumn="17"/>
-      </memberdef>
-      <memberdef kind="function" id="biorth_8_h_1ac43605fe3c1cf15df5a28b540766a03b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::string &amp;</type>
-        <definition>std::string &amp; ScalarTypeName</definition>
-        <argsstring>(ScalarType i)</argsstring>
-        <name>ScalarTypeName</name>
-        <param>
-          <type><ref refid="biorth_8_h_1afc6e90026099c08093d2dba767548f3c" kindref="member">ScalarType</ref></type>
-          <declname>i</declname>
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-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="283" column="13" declfile="/home/weinberg/Projects/EXP/include/biorth.H" declline="283" declcolumn="13"/>
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-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>Biorthnormal<sp/>function<sp/>class<sp/>defintion</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_biorth_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_biorth_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#undef<sp/>RNUM</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstdlib&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_biorth" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_biorth" kindref="compound">Biorth</ref></highlight></codeline>
-<codeline lineno="17"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" kindref="member">BiorthID</ref>;</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_biorth_1a83c4824d7003048794102f54152cfdbc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_biorth_1a83c4824d7003048794102f54152cfdbc" kindref="member">~Biorth</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_biorth_1a26e01c406def571a76990d1fc1a02b7f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_1a26e01c406def571a76990d1fc1a02b7f" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="25" refid="class_biorth_1ae6bb6919cb7f72259d5ad36946f1f088" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_1ae6bb6919cb7f72259d5ad36946f1f088" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="26" refid="class_biorth_1a582200336065fac43a3282ee0671cffb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_1a582200336065fac43a3282ee0671cffb" kindref="member">krnl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="27" refid="class_biorth_1a4997a44fb308362868547f4eb0f23c5a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_1a4997a44fb308362868547f4eb0f23c5a" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Report<sp/>ID</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_biorth_1a732367609f458cf4128bb37f2641c30b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="class_biorth_1a732367609f458cf4128bb37f2641c30b" kindref="member">id</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" kindref="member">BiorthID</ref>;}</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Error<sp/>function</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_biorth_1a3331c0ec9dabbed562c32c3d59c7b1bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_1a3331c0ec9dabbed562c32c3d59c7b1bb" kindref="member">bomb</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*s)<sp/>{</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;ERROR<sp/>from<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" kindref="member">BiorthID</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>s<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/>exit(-1);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_axi_sym_biorth" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_biorth" kindref="compound">Biorth</ref></highlight></codeline>
-<codeline lineno="44"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_axi_sym_biorth_1ab8503e21d6282991853c921409deb150" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_biorth_wake" kindref="compound">BiorthWake</ref>;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="49" refid="class_axi_sym_biorth_1a9d37a4dad785da836b339264b6176fc2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a9d37a4dad785da836b339264b6176fc2" kindref="member">dof</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="52" refid="class_axi_sym_biorth_1a5ab6aaba58d2c9115a111a5383158518" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_axi_sym_biorth_1a5ab6aaba58d2c9115a111a5383158518" kindref="member">AxiSymBiorth</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DOF=0)<sp/>{<sp/><ref refid="class_axi_sym_biorth_1a9d37a4dad785da836b339264b6176fc2" kindref="member">dof</ref><sp/>=<sp/>DOF;<sp/>}</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_axi_sym_biorth_1adcf402d63d58581bfb671cc97b213222" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1adcf402d63d58581bfb671cc97b213222" kindref="member">~AxiSymBiorth</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_axi_sym_biorth_1aaec9137305d7c2eed46ca59c5ea777b1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1aaec9137305d7c2eed46ca59c5ea777b1" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="57" refid="class_axi_sym_biorth_1a6cb90b729dbfb31340bf8930049df4cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a6cb90b729dbfb31340bf8930049df4cd" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="58" refid="class_axi_sym_biorth_1a63c2bf04065efbbdcb005377836e0894" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a63c2bf04065efbbdcb005377836e0894" kindref="member">potlR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="59" refid="class_axi_sym_biorth_1afa024ea053a13ae6094ed1ee65653eac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1afa024ea053a13ae6094ed1ee65653eac" kindref="member">potlRZ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Fast<sp/>for<sp/>expansion!<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>(using<sp/>recursion<sp/>relation)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_axi_sym_biorth_1a2216fefb9a71a8dcdd378da8c3d82fbb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a2216fefb9a71a8dcdd378da8c3d82fbb" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="63" refid="class_axi_sym_biorth_1a6222c8a860d4e41a3d81b74d790442c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a6222c8a860d4e41a3d81b74d790442c8" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_axi_sym_biorth_1a3815fa706249dff779ff597d8ab37c71" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a3815fa706249dff779ff597d8ab37c71" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="66" refid="class_axi_sym_biorth_1a5fea78e59e755b9d3e05965b223f10aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a5fea78e59e755b9d3e05965b223f10aa" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="67" refid="class_axi_sym_biorth_1aaaf67379cdeb608b5f9c07509bb22631" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1aaaf67379cdeb608b5f9c07509bb22631" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_axi_sym_biorth_1a732c3f77a9d9968f5a06ba7d57c69832" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a732c3f77a9d9968f5a06ba7d57c69832" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="70" refid="class_axi_sym_biorth_1a8a0737fc879f5950452fd0a0b895a57b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a8a0737fc879f5950452fd0a0b895a57b" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_axi_sym_biorth_1a9e4634e741f090bd7a2c088750d894e4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a9e4634e741f090bd7a2c088750d894e4" kindref="member">get_dof</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a9d37a4dad785da836b339264b6176fc2" kindref="member">dof</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_axi_sym_biorth_1a1220954284feb464502dd18a8a74440b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a1220954284feb464502dd18a8a74440b" kindref="member">get_potl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="75" refid="class_axi_sym_biorth_1a87004c3a9f3587d69b8e131389d53046" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth_1a87004c3a9f3587d69b8e131389d53046" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79" refid="biorth_8_h_1ac8c5ffffdeb6883b8e13706095e0b31f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;AxiSymBiorth&gt;<sp/><ref refid="biorth_8_h_1ac8c5ffffdeb6883b8e13706095e0b31f" kindref="member">AxiSymBioPtr</ref>;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>This<sp/>method<sp/>tends<sp/>to<sp/>be<sp/>about<sp/>3x<sp/>faster</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>than<sp/>the<sp/>direct<sp/>calls</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_biorth_grid" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_biorth_grid" kindref="compound">BiorthGrid</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref></highlight></codeline>
-<codeline lineno="85"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="88" refid="class_biorth_grid_1acbe9ea6505ff7f1104857c16b9c61c46" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="biorth_8_h_1ac8c5ffffdeb6883b8e13706095e0b31f" kindref="member">AxiSymBioPtr</ref><sp/><ref refid="class_biorth_grid_1acbe9ea6505ff7f1104857c16b9c61c46" kindref="member">t</ref>;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90" refid="class_biorth_grid_1ab918c9e10ff25d0b9d0f92ccbf521384" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1ab918c9e10ff25d0b9d0f92ccbf521384" kindref="member">rmin</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Range<sp/>limits</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_biorth_grid_1a5bbdb71ff885168a5aad261e28c90df4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a5bbdb71ff885168a5aad261e28c90df4" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="92" refid="class_biorth_grid_1a18b6bf7a6c915c6d895183cf9c9df0be" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a18b6bf7a6c915c6d895183cf9c9df0be" kindref="member">xmin</ref>;</highlight></codeline>
-<codeline lineno="93" refid="class_biorth_grid_1af21e0b01b16d01efc41c1d69e26c74df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1af21e0b01b16d01efc41c1d69e26c74df" kindref="member">xmax</ref>;</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_biorth_grid_1a1c2c67d88680b616c5ba019a855130e3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a1c2c67d88680b616c5ba019a855130e3" kindref="member">lmax</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Grid<sp/>sizes</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="class_biorth_grid_1a2d58c0f9435dddc6edb44b7c4a639d2b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a2d58c0f9435dddc6edb44b7c4a639d2b" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="97" refid="class_biorth_grid_1af30839e0a613eac55fd4bea9c0492fd9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1af30839e0a613eac55fd4bea9c0492fd9" kindref="member">rnum</ref>;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_biorth_grid_1a4f2de1959c4eec4b441141df53a15ab7" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_biorth_grid_1a4f2de1959c4eec4b441141df53a15ab7" kindref="member">potl_grid</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Grid<sp/>storage</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_biorth_grid_1a62f1191fef103d66053335506747b236" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_biorth_grid_1a62f1191fef103d66053335506747b236" kindref="member">potl_grid2</ref>;</highlight></codeline>
-<codeline lineno="101" refid="class_biorth_grid_1ae105a7f71b5673895fa2e1eb26321882" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_biorth_grid_1ae105a7f71b5673895fa2e1eb26321882" kindref="member">dens_grid</ref>;</highlight></codeline>
-<codeline lineno="102" refid="class_biorth_grid_1a429c093909f467dfc3e1377c15da7c1a" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::MatrixXd&gt;<sp/><ref refid="class_biorth_grid_1a429c093909f467dfc3e1377c15da7c1a" kindref="member">dens_grid2</ref>;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104" refid="class_biorth_grid_1a1ffb1d9de1e8b4344920825cce5cce9f" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_biorth_grid_1a1ffb1d9de1e8b4344920825cce5cce9f" kindref="member">x_grid</ref>;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="class_biorth_grid_1adf4c2f41e31aa503f8320c67aa98b7b7" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_biorth_grid_1adf4c2f41e31aa503f8320c67aa98b7b7" kindref="member">krnl_grid</ref>;</highlight></codeline>
-<codeline lineno="107" refid="class_biorth_grid_1ab0bc0db08e62181e9c5a5df6d7f2de48" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_biorth_grid_1ab0bc0db08e62181e9c5a5df6d7f2de48" kindref="member">norm_grid</ref>;<sp/></highlight><highlight class="comment">//<sp/>Stored<sp/>as<sp/>the<sp/>sqr<sp/>root<sp/>of<sp/>normalization</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>for<sp/>efficiency<sp/>in<sp/>wake<sp/>reconstruction</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="class_biorth_grid_1a248612ac515d8c4c5d69b8c48d02f785" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_biorth_grid_1a248612ac515d8c4c5d69b8c48d02f785" kindref="member">BiorthGrid</ref>(<ref refid="biorth_8_h_1ac8c5ffffdeb6883b8e13706095e0b31f" kindref="member">AxiSymBioPtr</ref><sp/>T,</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMIN=0.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX=20,<sp/></highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NMAX=10,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>LMAX=10,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>RNUM=400);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="116" refid="class_biorth_grid_1a13b9081755ef1094b3013d189d2e3782" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a13b9081755ef1094b3013d189d2e3782" kindref="member">~BiorthGrid</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120" refid="class_biorth_grid_1acfeb044faae7f0297ea3ec03c1bd5d3c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1acfeb044faae7f0297ea3ec03c1bd5d3c" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rb);</highlight></codeline>
-<codeline lineno="121" refid="class_biorth_grid_1a063a0e7a1e95de7279c414ec1a6efbe9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a063a0e7a1e95de7279c414ec1a6efbe9" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rb);</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123" refid="class_biorth_grid_1a720e595bfb5f186c4f7b8c068df2ca89" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a720e595bfb5f186c4f7b8c068df2ca89" kindref="member">potlR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1acfeb044faae7f0297ea3ec03c1bd5d3c" kindref="member">potl</ref>(nn,<sp/>l,<sp/><ref refid="class_biorth_grid_1af3484d627f5c19fda04b841138ba5f6e" kindref="member">r_to_rb</ref>(r)<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="125" refid="class_biorth_grid_1ae466fdb31305cf7fd961afc4211dfc78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1ae466fdb31305cf7fd961afc4211dfc78" kindref="member">densR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a063a0e7a1e95de7279c414ec1a6efbe9" kindref="member">dens</ref>(nn,<sp/>l,<sp/><ref refid="class_biorth_grid_1af3484d627f5c19fda04b841138ba5f6e" kindref="member">r_to_rb</ref>(r)<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="127" refid="class_biorth_grid_1afb16120068d63a28c18861cc30aeb125" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1afb16120068d63a28c18861cc30aeb125" kindref="member">potlRZ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1acbe9ea6505ff7f1104857c16b9c61c46" kindref="member">t</ref>-&gt;potlRZ(nn,<sp/>l,<sp/>r,<sp/>z);<sp/>}</highlight></codeline>
-<codeline lineno="130" refid="class_biorth_grid_1a2606ea4a67841e413c65fabd64290f24" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a2606ea4a67841e413c65fabd64290f24" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;<sp/>a)<sp/>{<ref refid="class_biorth_grid_1acbe9ea6505ff7f1104857c16b9c61c46" kindref="member">t</ref>-&gt;potl(nn,<sp/>l,<sp/>r,<sp/>a);}</highlight></codeline>
-<codeline lineno="132" refid="class_biorth_grid_1aba6b23af9b9d4be2884efe5f9001f615" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1aba6b23af9b9d4be2884efe5f9001f615" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;<sp/>a)<sp/>{<ref refid="class_biorth_grid_1acbe9ea6505ff7f1104857c16b9c61c46" kindref="member">t</ref>-&gt;dens(nn,<sp/>l,<sp/>r,<sp/>a);}</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="135" refid="class_biorth_grid_1a189de4839a2992723978e4ec20d27d2d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a189de4839a2992723978e4ec20d27d2d" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>rb)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1acbe9ea6505ff7f1104857c16b9c61c46" kindref="member">t</ref>-&gt;rb_to_r(rb);<sp/>}</highlight></codeline>
-<codeline lineno="136" refid="class_biorth_grid_1af3484d627f5c19fda04b841138ba5f6e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1af3484d627f5c19fda04b841138ba5f6e" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1acbe9ea6505ff7f1104857c16b9c61c46" kindref="member">t</ref>-&gt;r_to_rb(r);<sp/>}</highlight></codeline>
-<codeline lineno="137" refid="class_biorth_grid_1aef59b4452969227f3b8c9bc652924480" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1aef59b4452969227f3b8c9bc652924480" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1acbe9ea6505ff7f1104857c16b9c61c46" kindref="member">t</ref>-&gt;d_r_to_rb(r);<sp/>}</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139" refid="class_biorth_grid_1a8136aca7e670b7d53af834872a36851c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a8136aca7e670b7d53af834872a36851c" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a18b6bf7a6c915c6d895183cf9c9df0be" kindref="member">xmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="140" refid="class_biorth_grid_1a7357d2b62f3b84ffb74ddee3d454fb34" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a7357d2b62f3b84ffb74ddee3d454fb34" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1af21e0b01b16d01efc41c1d69e26c74df" kindref="member">xmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Supplemental<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight></codeline>
-<codeline lineno="144" refid="class_biorth_grid_1a12dbda3602ad9fd185974e861d2d4847" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a12dbda3602ad9fd185974e861d2d4847" kindref="member">krnl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1adf4c2f41e31aa503f8320c67aa98b7b7" kindref="member">krnl_grid</ref>(n,<sp/>l);<sp/>}</highlight></codeline>
-<codeline lineno="145" refid="class_biorth_grid_1a06dd94c9755d0d5b1bafee812ecc475a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1a06dd94c9755d0d5b1bafee812ecc475a" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l)</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_grid_1ab0bc0db08e62181e9c5a5df6d7f2de48" kindref="member">norm_grid</ref>(n,<sp/>l)*<ref refid="class_biorth_grid_1ab0bc0db08e62181e9c5a5df6d7f2de48" kindref="member">norm_grid</ref>(n,<sp/>l);<sp/>}</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"></highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight></codeline>
-<codeline lineno="152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153"><highlight class="normal"></highlight></codeline>
-<codeline lineno="154" refid="class_c_b_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_c_b_sphere" kindref="compound">CBSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref></highlight></codeline>
-<codeline lineno="155"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"></highlight></codeline>
-<codeline lineno="158" refid="class_c_b_sphere_1a2b9ed497a211222cd3d13069f4b02538" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a2b9ed497a211222cd3d13069f4b02538" kindref="member">rbmin</ref>;</highlight></codeline>
-<codeline lineno="159" refid="class_c_b_sphere_1aec8c9f5ad62fd1742af6467b4cc3f47b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1aec8c9f5ad62fd1742af6467b4cc3f47b" kindref="member">rbmax</ref>;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"></highlight></codeline>
-<codeline lineno="163" refid="class_c_b_sphere_1a5b138699b56d563e9c38d01cfdb5fc09" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_b_sphere_1a5b138699b56d563e9c38d01cfdb5fc09" kindref="member">CBSphere</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="164" refid="class_c_b_sphere_1a00e8807a9009b215b6aac0429e184820" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a00e8807a9009b215b6aac0429e184820" kindref="member">~CBSphere</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168" refid="class_c_b_sphere_1a8e11342a326bd8d9162ed1f080b2289d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a8e11342a326bd8d9162ed1f080b2289d" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rb);</highlight></codeline>
-<codeline lineno="169" refid="class_c_b_sphere_1aa15eab84732036c237fed5b453f26890" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1aa15eab84732036c237fed5b453f26890" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rb);</highlight></codeline>
-<codeline lineno="170" refid="class_c_b_sphere_1a30f37f527134f3e26f2fe128403fd57a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a30f37f527134f3e26f2fe128403fd57a" kindref="member">krnl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l);</highlight></codeline>
-<codeline lineno="171" refid="class_c_b_sphere_1ab7187a6b448753bbf3b5b011389c2b0f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1ab7187a6b448753bbf3b5b011389c2b0f" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l);</highlight></codeline>
-<codeline lineno="172" refid="class_c_b_sphere_1ac678e8f4063c7fe7969cea966bee306f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1ac678e8f4063c7fe7969cea966bee306f" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>a);</highlight></codeline>
-<codeline lineno="173" refid="class_c_b_sphere_1ac145373105c5cfe9ee48aed86e45cc6b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1ac145373105c5cfe9ee48aed86e45cc6b" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>a);</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Supplemental<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="176"><highlight class="normal"></highlight></codeline>
-<codeline lineno="177" refid="class_c_b_sphere_1ab51702582eaf87903dfcb67dde076bfc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1ab51702582eaf87903dfcb67dde076bfc" kindref="member">potlR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a8e11342a326bd8d9162ed1f080b2289d" kindref="member">potl</ref>(nn,<sp/>l,<sp/><ref refid="class_c_b_sphere_1a7feeedd098bdabc064714e74ddaff5b2" kindref="member">r_to_rb</ref>(r)<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="179" refid="class_c_b_sphere_1a2d1d687beac91060aab378a788b6e716" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a2d1d687beac91060aab378a788b6e716" kindref="member">densR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1aa15eab84732036c237fed5b453f26890" kindref="member">dens</ref>(nn,<sp/>l,<sp/><ref refid="class_c_b_sphere_1a7feeedd098bdabc064714e74ddaff5b2" kindref="member">r_to_rb</ref>(r)<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="181" refid="class_c_b_sphere_1a016c904c50ee75df408a579864050fce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a016c904c50ee75df408a579864050fce" kindref="member">potlRZ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a8e11342a326bd8d9162ed1f080b2289d" kindref="member">potl</ref>(nn,<sp/>l,<sp/><ref refid="class_c_b_sphere_1a7feeedd098bdabc064714e74ddaff5b2" kindref="member">r_to_rb</ref>(sqrt(r*r+z*z))<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"></highlight></codeline>
-<codeline lineno="185" refid="class_c_b_sphere_1aac3759c7d3a469085bce3564b1fbef78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1aac3759c7d3a469085bce3564b1fbef78" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="186" refid="class_c_b_sphere_1a7feeedd098bdabc064714e74ddaff5b2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a7feeedd098bdabc064714e74ddaff5b2" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="187" refid="class_c_b_sphere_1a5e5174cddc3660e600e894d8747f01c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a5e5174cddc3660e600e894d8747f01c2" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"></highlight></codeline>
-<codeline lineno="189" refid="class_c_b_sphere_1a55d6ae71c13aeeb6701b9a1be043b954" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a55d6ae71c13aeeb6701b9a1be043b954" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a2b9ed497a211222cd3d13069f4b02538" kindref="member">rbmin</ref>;}</highlight></codeline>
-<codeline lineno="190" refid="class_c_b_sphere_1a1a2c5078e9e6a69522275c6febb534f6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1a1a2c5078e9e6a69522275c6febb534f6" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_c_b_sphere_1aec8c9f5ad62fd1742af6467b4cc3f47b" kindref="member">rbmax</ref>;}</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="192"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194" refid="class_h_q_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_h_q_sphere" kindref="compound">HQSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref></highlight></codeline>
-<codeline lineno="195"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198" refid="class_h_q_sphere_1a194e1e87c7d017e8a567acf91f8f8e54" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a194e1e87c7d017e8a567acf91f8f8e54" kindref="member">rbmin</ref>;</highlight></codeline>
-<codeline lineno="199" refid="class_h_q_sphere_1ad3773cae92abbcc207624eff7ded462c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1ad3773cae92abbcc207624eff7ded462c" kindref="member">rbmax</ref>;</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
-<codeline lineno="201"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"></highlight></codeline>
-<codeline lineno="203" refid="class_h_q_sphere_1ae8b3c95585716adf85e48205b82160f5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_h_q_sphere_1ae8b3c95585716adf85e48205b82160f5" kindref="member">HQSphere</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="204" refid="class_h_q_sphere_1a4952c199c4dc8964fcf6d8fa96e89268" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a4952c199c4dc8964fcf6d8fa96e89268" kindref="member">~HQSphere</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="207" refid="class_h_q_sphere_1a473272545f1cba15a45d79ece84cbae2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a473272545f1cba15a45d79ece84cbae2" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rb);</highlight></codeline>
-<codeline lineno="208" refid="class_h_q_sphere_1a396c43ce8324193aa47a5873e025cfd1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a396c43ce8324193aa47a5873e025cfd1" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rb);</highlight></codeline>
-<codeline lineno="209" refid="class_h_q_sphere_1a6095bf4dfc2cd4cac26831c4fda4cf8f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a6095bf4dfc2cd4cac26831c4fda4cf8f" kindref="member">krnl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l);</highlight></codeline>
-<codeline lineno="210" refid="class_h_q_sphere_1aac6bf4b01e942cb058726094832eeb03" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1aac6bf4b01e942cb058726094832eeb03" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l);</highlight></codeline>
-<codeline lineno="211" refid="class_h_q_sphere_1a600350ad6e621b31394b9b6292b1ccc0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a600350ad6e621b31394b9b6292b1ccc0" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>a);</highlight></codeline>
-<codeline lineno="212" refid="class_h_q_sphere_1a752eb9da99ccd28691475dc11613a122" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a752eb9da99ccd28691475dc11613a122" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>a);</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"></highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Supplemental<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="216" refid="class_h_q_sphere_1a12c53c076d3aacdcf393c40aecef57a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a12c53c076d3aacdcf393c40aecef57a7" kindref="member">potlR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a473272545f1cba15a45d79ece84cbae2" kindref="member">potl</ref>(nn,<sp/>l,<sp/><ref refid="class_h_q_sphere_1a5339ea70096852fe29b59e905a5696fe" kindref="member">r_to_rb</ref>(r)<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="218" refid="class_h_q_sphere_1a3a79cabc64d4f36000dc8c6101bae927" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a3a79cabc64d4f36000dc8c6101bae927" kindref="member">densR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a396c43ce8324193aa47a5873e025cfd1" kindref="member">dens</ref>(nn,<sp/>l,<sp/><ref refid="class_h_q_sphere_1a5339ea70096852fe29b59e905a5696fe" kindref="member">r_to_rb</ref>(r)<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="220" refid="class_h_q_sphere_1a90ea3c5f29a8f5fd97105ec4c05ca5a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a90ea3c5f29a8f5fd97105ec4c05ca5a4" kindref="member">potlRZ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a473272545f1cba15a45d79ece84cbae2" kindref="member">potl</ref>(nn,<sp/>l,<sp/><ref refid="class_h_q_sphere_1a5339ea70096852fe29b59e905a5696fe" kindref="member">r_to_rb</ref>(sqrt(r*r+z*z))<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224" refid="class_h_q_sphere_1a8c4a12167858d921738b4e3c70a342b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a8c4a12167858d921738b4e3c70a342b9" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="225" refid="class_h_q_sphere_1a5339ea70096852fe29b59e905a5696fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a5339ea70096852fe29b59e905a5696fe" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="226" refid="class_h_q_sphere_1a73ee63f0e7429ffbb2bfa4784bcb1d2a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a73ee63f0e7429ffbb2bfa4784bcb1d2a" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight></codeline>
-<codeline lineno="228" refid="class_h_q_sphere_1a1471a710645006971ffb8b05f05c3d69" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a1471a710645006971ffb8b05f05c3d69" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a194e1e87c7d017e8a567acf91f8f8e54" kindref="member">rbmin</ref>;}</highlight></codeline>
-<codeline lineno="229" refid="class_h_q_sphere_1a0b37f25b7ccf91842521b36322ac8c30" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1a0b37f25b7ccf91842521b36322ac8c30" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_h_q_sphere_1ad3773cae92abbcc207624eff7ded462c" kindref="member">rbmax</ref>;}</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="231"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"></highlight></codeline>
-<codeline lineno="234" refid="class_b_s_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_b_s_sphere" kindref="compound">BSSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref></highlight></codeline>
-<codeline lineno="235"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight></codeline>
-<codeline lineno="238" refid="class_b_s_sphere_1ae624f10745fff2b369772e014b0534fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1ae624f10745fff2b369772e014b0534fd" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="239" refid="class_b_s_sphere_1a9bc4b2deaf6374c33a94f424840c393e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a9bc4b2deaf6374c33a94f424840c393e" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="240" refid="class_b_s_sphere_1a4d4023f0b09f76b2128eee30c9adab0b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a4d4023f0b09f76b2128eee30c9adab0b" kindref="member">lmax</ref>;</highlight></codeline>
-<codeline lineno="241"><highlight class="normal"></highlight></codeline>
-<codeline lineno="242" refid="class_b_s_sphere_1a081e0c0dc7ba0c6ce3a90d1622865b8f" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Eigen::VectorXd&gt;<sp/><ref refid="class_b_s_sphere_1a081e0c0dc7ba0c6ce3a90d1622865b8f" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="243" refid="class_b_s_sphere_1a791fb84538b1eb679d3642fbf3cf60aa" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_b_s_sphere_1a791fb84538b1eb679d3642fbf3cf60aa" kindref="member">t_f</ref>,<sp/><ref refid="class_b_s_sphere_1a6f28b6caab3c3d5995441946d2542720" kindref="member">t_y</ref>,<sp/><ref refid="class_b_s_sphere_1a03375a5fb624a34f287da4bf5a3660ec" kindref="member">t_g</ref>;</highlight></codeline>
-<codeline lineno="244" refid="class_b_s_sphere_1a05b62809be5322921c33adbbdde61e6d" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_b_s_sphere_1a05b62809be5322921c33adbbdde61e6d" kindref="member">t_dr</ref>;</highlight></codeline>
-<codeline lineno="245" refid="class_b_s_sphere_1a98f6c94e9fd65eb1fd92b3920601472d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a98f6c94e9fd65eb1fd92b3920601472d" kindref="member">t_n</ref>;</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247" refid="class_b_s_sphere_1a1612e959166c176c157a150f85aaa5e1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a1612e959166c176c157a150f85aaa5e1" kindref="member">setup_potl_table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight></codeline>
-<codeline lineno="249"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"></highlight></codeline>
-<codeline lineno="251" refid="class_b_s_sphere_1a1f87227799e16c876be5438f666f1516" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_b_s_sphere_1a1f87227799e16c876be5438f666f1516" kindref="member">BSSphere</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX=1.0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NMAX=10,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>LMAX=10);</highlight></codeline>
-<codeline lineno="252" refid="class_b_s_sphere_1a16e51a01df7049734c511adba3d65db4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a16e51a01df7049734c511adba3d65db4" kindref="member">~BSSphere</ref>();</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"></highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="255"><highlight class="normal"></highlight></codeline>
-<codeline lineno="256" refid="class_b_s_sphere_1a74e4f6e7bb5a702c339b7ed08b1b147f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a74e4f6e7bb5a702c339b7ed08b1b147f" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rb);</highlight></codeline>
-<codeline lineno="257" refid="class_b_s_sphere_1a9f75d80acfcf6adcfb4409dfea289d44" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a9f75d80acfcf6adcfb4409dfea289d44" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rb);</highlight></codeline>
-<codeline lineno="258" refid="class_b_s_sphere_1a85f774b0d688b3fbeb61651138f6553e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a85f774b0d688b3fbeb61651138f6553e" kindref="member">krnl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="259" refid="class_b_s_sphere_1a56266207d6f674517e9453fa7cc09943" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a56266207d6f674517e9453fa7cc09943" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="260" refid="class_b_s_sphere_1a5bc613ac2c95ca1f6004a4adb316782b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a5bc613ac2c95ca1f6004a4adb316782b" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>t);</highlight></codeline>
-<codeline lineno="261" refid="class_b_s_sphere_1af208912e2b5129238361122d26ba570f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1af208912e2b5129238361122d26ba570f" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/>Eigen::VectorXd&amp;<sp/>t);</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"></highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Supplemental<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="265" refid="class_b_s_sphere_1afc6b63870d35546e85b9a234689d14f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1afc6b63870d35546e85b9a234689d14f2" kindref="member">potlR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a74e4f6e7bb5a702c339b7ed08b1b147f" kindref="member">potl</ref>(nn,<sp/>l,<sp/>r<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="267" refid="class_b_s_sphere_1a63934682767d3047ec59909b743fcdb9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a63934682767d3047ec59909b743fcdb9" kindref="member">densR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a9f75d80acfcf6adcfb4409dfea289d44" kindref="member">dens</ref>(nn,<sp/>l,<sp/>r<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="269" refid="class_b_s_sphere_1a6b207a89cd7816edad8d5b4e89917ae5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a6b207a89cd7816edad8d5b4e89917ae5" kindref="member">potlRZ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nn,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,</highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a74e4f6e7bb5a702c339b7ed08b1b147f" kindref="member">potl</ref>(nn,<sp/>l,<sp/><ref refid="class_b_s_sphere_1a81281856517002989aae97dd6b9dea1c" kindref="member">r_to_rb</ref>(sqrt(r*r+z*z))<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"></highlight></codeline>
-<codeline lineno="273" refid="class_b_s_sphere_1a16b38cfe134475522d1d6ab0515852e7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a16b38cfe134475522d1d6ab0515852e7" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;<sp/>}</highlight></codeline>
-<codeline lineno="274" refid="class_b_s_sphere_1a81281856517002989aae97dd6b9dea1c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a81281856517002989aae97dd6b9dea1c" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r;<sp/>}</highlight></codeline>
-<codeline lineno="275" refid="class_b_s_sphere_1a12e2482b698749baac5e6e38a102b0a6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1a12e2482b698749baac5e6e38a102b0a6" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"></highlight></codeline>
-<codeline lineno="277" refid="class_b_s_sphere_1ab54f1a8062883e7dd6f0e117a43eeb59" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1ab54f1a8062883e7dd6f0e117a43eeb59" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;}</highlight></codeline>
-<codeline lineno="278" refid="class_b_s_sphere_1ae93400d3088e00815b34976e83fb1393" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1ae93400d3088e00815b34976e83fb1393" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_b_s_sphere_1ae624f10745fff2b369772e014b0534fd" kindref="member">rmax</ref>;}</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"></highlight></codeline>
-<codeline lineno="280"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"></highlight></codeline>
-<codeline lineno="282" refid="biorth_8_h_1afc6e90026099c08093d2dba767548f3ca22ebfd60994ac594c00a8e367372d092" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="biorth_8_h_1afc6e90026099c08093d2dba767548f3c" kindref="member">ScalarType</ref><sp/>{<ref refid="biorth_8_h_1afc6e90026099c08093d2dba767548f3ca22ebfd60994ac594c00a8e367372d092" kindref="member">density</ref>,<sp/><ref refid="biorth_8_h_1afc6e90026099c08093d2dba767548f3ca3411cb34f943955f072e60575ed46756" kindref="member">potential</ref>};</highlight></codeline>
-<codeline lineno="283" refid="biorth_8_h_1ac43605fe3c1cf15df5a28b540766a03b" refkind="member"><highlight class="normal">std::string&amp;<sp/><ref refid="biorth_8_h_1ac43605fe3c1cf15df5a28b540766a03b" kindref="member">ScalarTypeName</ref>(<ref refid="biorth_8_h_1afc6e90026099c08093d2dba767548f3c" kindref="member">ScalarType</ref><sp/>i);</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"></highlight></codeline>
-<codeline lineno="285" refid="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aa750b3d98ea0866a01b86f76b69bdada4" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77a" kindref="member">BiorthFcts3d</ref><sp/>{<ref refid="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aa750b3d98ea0866a01b86f76b69bdada4" kindref="member">bessel</ref>,<sp/><ref refid="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aa40dfd50bb32e4cbe1bf99fd2d5c4178f" kindref="member">clutton_brock</ref>,<sp/><ref refid="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aa2152559d6a29a11bf6a18674390defb7" kindref="member">hernquist</ref>,<sp/><ref refid="biorth_8_h_1a021b8d5d0de968b2a533d342c41af77aab9f6d1ce6accee067d448bc541b53607" kindref="member">sturm</ref>};</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"></highlight></codeline>
-<codeline lineno="287" refid="biorth_8_h_1a2840b42a4e647b40323cfec376a28a07" refkind="member"><highlight class="normal">Eigen::VectorXd<sp/><ref refid="biorth_8_h_1a2840b42a4e647b40323cfec376a28a07" kindref="member">scalar_prod</ref>(<ref refid="biorth_8_h_1afc6e90026099c08093d2dba767548f3c" kindref="member">ScalarType</ref><sp/>type,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmax,</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref>&amp;<sp/>s,</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)&gt;<sp/>func,</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nc,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ng);</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"></highlight></codeline>
-<codeline lineno="293" refid="biorth_8_h_1ae53bd1dcac6d0c4595385922e1a9e158" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="biorth_8_h_1ae53bd1dcac6d0c4595385922e1a9e158" kindref="member">BiorthFcts3dName</ref>[]<sp/>=<sp/>{</highlight><highlight class="stringliteral">&quot;BSSphere&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;CBSphere&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;HQSphere&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;SphereSL&quot;</highlight><highlight class="normal">};</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="295"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;AxiSymBiorth&gt;<sp/><ref refid="biorth_8_h_1ac8c5ffffdeb6883b8e13706095e0b31f" kindref="member">AxiSymBioPtr</ref>;</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"></highlight></codeline>
-<codeline lineno="297"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/biorth.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/biorth__wake_8_h.xml b/doxyxml/biorth__wake_8_h.xml
deleted file mode 100644
index bc7d952..0000000
--- a/doxyxml/biorth__wake_8_h.xml
+++ /dev/null
@@ -1,166 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="biorth__wake_8_h" kind="file" language="C++">
-    <compoundname>biorth_wake.H</compoundname>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes local="no">complex</includes>
-    <includes refid="biorth_8_h" local="no">biorth.H</includes>
-    <incdepgraph>
-      <node id="4">
-        <label>biorth.H</label>
-        <link refid="biorth_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/biorth_wake.H</label>
-        <link refid="biorth__wake_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="3">
-        <label>complex</label>
-      </node>
-      <node id="7">
-        <label>cstdlib</label>
-      </node>
-      <node id="6">
-        <label>iomanip</label>
-      </node>
-      <node id="5">
-        <label>iostream</label>
-      </node>
-      <node id="9">
-        <label>memory</label>
-      </node>
-      <node id="8">
-        <label>string</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_biorth_wake" prot="public">BiorthWake</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>This<sp/>may<sp/>look<sp/>like<sp/>C<sp/>code,<sp/>but<sp/>it<sp/>is<sp/>really<sp/>-*-<sp/>C++<sp/>-*-</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Wake<sp/>generation<sp/>class</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_biorth_wake_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_biorth_wake_h<sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;complex&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="biorth_8_h" kindref="compound">biorth.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12" refid="class_biorth_wake" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_biorth_wake" kindref="compound">BiorthWake</ref></highlight></codeline>
-<codeline lineno="13"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="class_biorth_wake_1a3d122ae4cd8d8465387df760aa8f1dd7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref><sp/>*<ref refid="class_biorth_wake_1a3d122ae4cd8d8465387df760aa8f1dd7" kindref="member">bio</ref>;</highlight></codeline>
-<codeline lineno="18" refid="class_biorth_wake_1aec6b021a838a46b213837a34c49fe8f0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1aec6b021a838a46b213837a34c49fe8f0" kindref="member">lmax</ref>,<sp/><ref refid="class_biorth_wake_1a29ebef81ff3db1e400d26c0f8d97b3e7" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_biorth_wake_1aecc0e08f2416a67c723ae0c652df3863" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_biorth_wake_1aecc0e08f2416a67c723ae0c652df3863" kindref="member">norm_grid</ref>;<sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Stored<sp/>as<sp/>the<sp/>sqr<sp/>root<sp/>of</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>normalization<sp/>for<sp/>efficiency<sp/>in</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>wake<sp/>reconstruction</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_biorth_wake_1a3c45bdfd6d5703fe31a50bc9cb29d11c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a3c45bdfd6d5703fe31a50bc9cb29d11c" kindref="member">coefs_defined</ref>;</highlight></codeline>
-<codeline lineno="25" refid="class_biorth_wake_1aced7d6005f42aaf2f485c6d00d4a039e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_biorth_wake_1aced7d6005f42aaf2f485c6d00d4a039e" kindref="member">factorial</ref>;</highlight></codeline>
-<codeline lineno="26" refid="class_biorth_wake_1aace083657da48c081b9ac18f8079a3de" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_biorth_wake_1aace083657da48c081b9ac18f8079a3de" kindref="member">expcoef</ref>;</highlight></codeline>
-<codeline lineno="27" refid="class_biorth_wake_1a16df2058df3d107c59b731ef91cb474b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a16df2058df3d107c59b731ef91cb474b" kindref="member">rscl</ref>;</highlight></codeline>
-<codeline lineno="28" refid="class_biorth_wake_1a1b4e13bcd12d9150089c2254874eaece" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a1b4e13bcd12d9150089c2254874eaece" kindref="member">used</ref>;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_biorth_wake_1a2d4d92d6847b2bbfe14fb2fbb0bcd6b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a2d4d92d6847b2bbfe14fb2fbb0bcd6b0" kindref="member">accumulate_2d</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass);</highlight></codeline>
-<codeline lineno="31" refid="class_biorth_wake_1af8ececf0c02944c32180bd6a6d5dd222" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1af8ececf0c02944c32180bd6a6d5dd222" kindref="member">accumulate_3d</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_biorth_wake_1a87be94370d011ecd85bed933703ecd1f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a87be94370d011ecd85bed933703ecd1f" kindref="member">reconstruct_2d</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dens,<sp/></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl,</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L2=10000);</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_biorth_wake_1a34de97783782ae415d3006463dd6bf49" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a34de97783782ae415d3006463dd6bf49" kindref="member">reconstruct_3d</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>costh,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dens,<sp/></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl,</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L2=10000);</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_biorth_wake_1a8698d99f8318a8bad2138a3e342462ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a8698d99f8318a8bad2138a3e342462ae" kindref="member">bomb</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*s);</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Orientation</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_biorth_wake_1aa010d45b49ace3cca6d3778993596cbb" refkind="member"><highlight class="normal"><sp/><sp/>std::complex&lt;double&gt;<sp/><ref refid="class_biorth_wake_1aa010d45b49ace3cca6d3778993596cbb" kindref="member">I</ref>;</highlight></codeline>
-<codeline lineno="48" refid="class_biorth_wake_1aad2d849bd09404af716e29fef07b4122" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXcd<sp/><ref refid="class_biorth_wake_1aad2d849bd09404af716e29fef07b4122" kindref="member">ylm</ref>;</highlight></codeline>
-<codeline lineno="49" refid="class_biorth_wake_1adeb9b2447bdf61c6d571409e19d94e8d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1adeb9b2447bdf61c6d571409e19d94e8d" kindref="member">init_orientation</ref>;</highlight></codeline>
-<codeline lineno="50" refid="class_biorth_wake_1a9dcaf70ce76acceba188a9d4cea64ab7" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_biorth_wake_1a33604e947e18c8667959bb409f172669" kindref="member">param</ref>,<sp/><ref refid="class_biorth_wake_1aaa25ed3e8333ab6f0a3954fb3a81ed1a" kindref="member">psum</ref>,<sp/><ref refid="class_biorth_wake_1aaa4fe067c7fb6656cf1458b1939b98b5" kindref="member">ptry</ref>,<sp/><ref refid="class_biorth_wake_1a9dcaf70ce76acceba188a9d4cea64ab7" kindref="member">amby</ref>;</highlight></codeline>
-<codeline lineno="51" refid="class_biorth_wake_1a918a339d53b3129001f1e9ef55cec03f" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::vector&lt;double&gt;&gt;<sp/><ref refid="class_biorth_wake_1a918a339d53b3129001f1e9ef55cec03f" kindref="member">ambp</ref>;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_biorth_wake_1a761aabc81cf82cbd06c203e67b0ab55b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a761aabc81cf82cbd06c203e67b0ab55b" kindref="member">iter</ref>,<sp/><ref refid="class_biorth_wake_1ac91d3df81b1752f899e0924c292d98b6" kindref="member">ll</ref>,<sp/><ref refid="class_biorth_wake_1a13d4e382bae25d228ccfd7240a7bcdb9" kindref="member">mm</ref>;</highlight></codeline>
-<codeline lineno="54" refid="class_biorth_wake_1a79ab99d2abf834967c34a0e16c4dbd67" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a79ab99d2abf834967c34a0e16c4dbd67" kindref="member">tol</ref>;</highlight></codeline>
-<codeline lineno="55" refid="class_biorth_wake_1a8ec22ea36595c50f4e85973b9e0936b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a8ec22ea36595c50f4e85973b9e0936b9" kindref="member">iterDef</ref>;</highlight></codeline>
-<codeline lineno="56" refid="class_biorth_wake_1a5abedd0c94ab4d8187e85949f114c129" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a5abedd0c94ab4d8187e85949f114c129" kindref="member">tolDef</ref>;</highlight></codeline>
-<codeline lineno="57" refid="class_biorth_wake_1a6532bf593c12958d7a4b50dd50e963b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a6532bf593c12958d7a4b50dd50e963b0" kindref="member">ndim</ref>;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_biorth_wake_1a9fa535d4091e22ecaf923fdd8aa0c8b4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a9fa535d4091e22ecaf923fdd8aa0c8b4" kindref="member">nfunk</ref>;</highlight></codeline>
-<codeline lineno="60" refid="class_biorth_wake_1ac14c747f7eaf2d519442452d695b1fca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1ac14c747f7eaf2d519442452d695b1fca" kindref="member">modulo_param</ref>(std::vector&lt;double&gt;&amp;<sp/>params);</highlight></codeline>
-<codeline lineno="61" refid="class_biorth_wake_1a1ce0e032fa1d45bfdbcce3fe8a7e79fa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a1ce0e032fa1d45bfdbcce3fe8a7e79fa" kindref="member">orientation_init</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="62" refid="class_biorth_wake_1a1d7317ae9d7d411e574d44d15a0b54bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a1d7317ae9d7d411e574d44d15a0b54bb" kindref="member">amoeba_energy</ref>(std::vector&lt;double&gt;&amp;<sp/>params);</highlight></codeline>
-<codeline lineno="63" refid="class_biorth_wake_1af0802d0387df6ed380b8468314117809" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1af0802d0387df6ed380b8468314117809" kindref="member">get_transform</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>phi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>theta,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>psi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>cost);</highlight></codeline>
-<codeline lineno="64" refid="class_biorth_wake_1a2537c6bb228af55b38f8fc6c629826bd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a2537c6bb228af55b38f8fc6c629826bd" kindref="member">amoeba</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="65" refid="class_biorth_wake_1a9abfe7e8c9bb0b38386afbf032ac3953" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a9abfe7e8c9bb0b38386afbf032ac3953" kindref="member">amotry</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ihi,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fac);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Debugging<sp/>routines<sp/>only</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_biorth_wake_1aef928f5838a6b280af71e9e35402495e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1aef928f5838a6b280af71e9e35402495e" kindref="member">test_transform</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="68" refid="class_biorth_wake_1a7779142bb94939f2dd22775efae362fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a7779142bb94939f2dd22775efae362fd" kindref="member">check_orientation</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="69" refid="class_biorth_wake_1a00e2faa814f3dd3532e5435be310ba7f" refkind="member"><highlight class="normal"><sp/><sp/>std::complex&lt;double&gt;<sp/><ref refid="class_biorth_wake_1a00e2faa814f3dd3532e5435be310ba7f" kindref="member">test_fct</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Constructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_biorth_wake_1a1936e7cdf4462a5b6d4e87d25fbb8dd2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_biorth_wake_1a1936e7cdf4462a5b6d4e87d25fbb8dd2" kindref="member">BiorthWake</ref>(<ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref><sp/>*BIO,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>LMAX,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NMAX);</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Destructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="class_biorth_wake_1a7513c664ff8f046c35faa17690935671" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_biorth_wake_1a7513c664ff8f046c35faa17690935671" kindref="member">~BiorthWake</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_biorth_wake_1a11f4732dd628b2a39980e443894fe7be" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a11f4732dd628b2a39980e443894fe7be" kindref="member">set_scale</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>scl)<sp/>{<sp/><ref refid="class_biorth_wake_1a16df2058df3d107c59b731ef91cb474b" kindref="member">rscl</ref><sp/>=<sp/>scl;<sp/>}</highlight></codeline>
-<codeline lineno="81" refid="class_biorth_wake_1a64a0b3883833ee60dd5ad6e273c80dd2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a64a0b3883833ee60dd5ad6e273c80dd2" kindref="member">reset_coefs</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_biorth_wake_1a827b4044524ba2cf003e095c3a816dc0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a827b4044524ba2cf003e095c3a816dc0" kindref="member">accumulate</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mass);</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85" refid="class_biorth_wake_1a33ea42ffb26ee85d13242a4b4c792cb2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a33ea42ffb26ee85d13242a4b4c792cb2" kindref="member">reconstruct</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>costh,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>phi,</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dens0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dens,<sp/></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>potl,</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L1=0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L2=10000);</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90" refid="class_biorth_wake_1a32d6e7c92f91510e003a922eea897a90" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a32d6e7c92f91510e003a922eea897a90" kindref="member">orientation</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>L,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M,</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;<sp/>phi,<sp/>Eigen::VectorXd&amp;<sp/>theta,</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;<sp/>psi,<sp/>Eigen::VectorXd&amp;<sp/>cost);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94" refid="class_biorth_wake_1a52a8d9073ffeaf19633bad02a9553b08" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a52a8d9073ffeaf19633bad02a9553b08" kindref="member">get_amoeba_iterations</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_biorth_wake_1a9fa535d4091e22ecaf923fdd8aa0c8b4" kindref="member">nfunk</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
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deleted file mode 100644
index 5be0c8a..0000000
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-      </node>
-      <node id="4">
-        <label>mutex</label>
-      </node>
-      <node id="6">
-        <label>stdexcept</label>
-      </node>
-      <node id="7">
-        <label>utility</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="structcircular__buffer_1_1_buffer_iterator" prot="private">circular_buffer::BufferIterator</innerclass>
-    <innerclass refid="classcircular__buffer" prot="public">circular_buffer</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>CIRCULAR_BUFFER_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>CIRCULAR_BUFFER_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;algorithm&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iterator&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;mutex&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;stdexcept&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;utility&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="18" refid="classcircular__buffer" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcircular__buffer" kindref="compound">circular_buffer</ref></highlight></codeline>
-<codeline lineno="19"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="22" refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>T<sp/><ref refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" kindref="member">value_type</ref>;</highlight></codeline>
-<codeline lineno="23" refid="classcircular__buffer_1a35e0b44803a7c60827a6cb8dee524749" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>T*<sp/><ref refid="classcircular__buffer_1a35e0b44803a7c60827a6cb8dee524749" kindref="member">pointer</ref>;</highlight></codeline>
-<codeline lineno="24" refid="classcircular__buffer_1a4d73e3d69db8f909ce681362c9260093" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T*<sp/><ref refid="classcircular__buffer_1a4d73e3d69db8f909ce681362c9260093" kindref="member">const_pointer</ref>;</highlight></codeline>
-<codeline lineno="25" refid="classcircular__buffer_1abb81e36d276737bd49850c75df30cc97" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>T&amp;<sp/><ref refid="classcircular__buffer_1abb81e36d276737bd49850c75df30cc97" kindref="member">reference</ref>;</highlight></codeline>
-<codeline lineno="26" refid="classcircular__buffer_1a802276d1b7ab7a74881650ae6f54ef27" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T&amp;<sp/><ref refid="classcircular__buffer_1a802276d1b7ab7a74881650ae6f54ef27" kindref="member">const_reference</ref>;</highlight></codeline>
-<codeline lineno="27" refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref>;</highlight></codeline>
-<codeline lineno="28" refid="classcircular__buffer_1a117ff2eb70dfb87fa58a62612f09b1e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>ptrdiff_t<sp/><ref refid="classcircular__buffer_1a117ff2eb70dfb87fa58a62612f09b1e9" kindref="member">difference_type</ref>;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>isConst&gt;<sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="34" refid="classcircular__buffer_1a41ab0b98629a148acb501c869f6751c0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a41ab0b98629a148acb501c869f6751c0" kindref="member">circular_buffer</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a7353055412749e48c2b68f2c251f5a48" kindref="member">size</ref>)</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/>:_buff{std::unique_ptr&lt;T[]&gt;(new<sp/><ref refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" kindref="member">value_type</ref>[<ref refid="classcircular__buffer_1a7353055412749e48c2b68f2c251f5a48" kindref="member">size</ref>])},<sp/>_max_size{<ref refid="classcircular__buffer_1a7353055412749e48c2b68f2c251f5a48" kindref="member">size</ref>}{}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="38" refid="classcircular__buffer_1a7eddbde9f8fcd9f908a0373a5eb11068" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1a7eddbde9f8fcd9f908a0373a5eb11068" kindref="member">circular_buffer</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer" kindref="compound">circular_buffer</ref>&amp;<sp/>other)</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/>:_buff{std::unique_ptr&lt;T[]&gt;(new<sp/><ref refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" kindref="member">value_type</ref>[other._max_size])},</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>_max_size{other._max_size},</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>_size{other._size},</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>_head{other._head},</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>_tail{other._tail}{</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::copy(other.<ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>(),<sp/>other.<ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>()<sp/>+<sp/>_max_size,<sp/>_buff.get());</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="49" refid="classcircular__buffer_1a4c2b114337e44b3485a3419b6e772b86" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer" kindref="compound">circular_buffer</ref>&amp;<sp/><ref refid="classcircular__buffer_1a4c2b114337e44b3485a3419b6e772b86" kindref="member">operator=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer" kindref="compound">circular_buffer</ref>&amp;<sp/>other){</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/></highlight><highlight class="keyword">this</highlight><highlight class="normal"><sp/>!=<sp/>&amp;other){</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_buff.reset(</highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" kindref="member">value_type</ref>[other._max_size]);</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_max_size<sp/>=<sp/>other._max_size;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_size<sp/>=<sp/>other._size;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_head<sp/>=<sp/>other._head;</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_tail<sp/>=<sp/>other._tail;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::copy(other.<ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>(),<sp/>other.<ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>()<sp/>+<sp/>_max_size,<sp/>_buff.get());</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="61" refid="classcircular__buffer_1a8d8c7c08ef7b88a41074e8c1bce0a5c0" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1a8d8c7c08ef7b88a41074e8c1bce0a5c0" kindref="member">circular_buffer</ref>(<ref refid="classcircular__buffer" kindref="compound">circular_buffer</ref>&amp;&amp;<sp/>other)<sp/>noexcept</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/>:_buff{std::move(other._buff)},</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>_max_size{other._max_size},</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>_size{other._size},</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>_head{other._head},</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>_tail{other._tail}{</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>other._buff<sp/>=<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>other._max_size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>other._size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>other._head<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>other._tail<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="76" refid="classcircular__buffer_1a16a1f1d098336cfdf784a36fdd35b034" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer" kindref="compound">circular_buffer</ref>&amp;<sp/><ref refid="classcircular__buffer_1a16a1f1d098336cfdf784a36fdd35b034" kindref="member">operator=</ref>(<ref refid="classcircular__buffer" kindref="compound">circular_buffer</ref>&amp;&amp;<sp/>other)<sp/></highlight><highlight class="keyword">noexcept</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<sp/></highlight><highlight class="keyword">this</highlight><highlight class="normal"><sp/>!=<sp/>&amp;other){</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_buff<sp/>=<sp/>std::move(other._buff);</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_max_size<sp/>=<sp/>other._max_size;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_size<sp/>=<sp/>other._size;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_head<sp/>=<sp/>other._head;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_tail<sp/>=<sp/>other._tail;</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>other._buff<sp/>=<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>other._max_size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>other._size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>other._head<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>other._tail<sp/>=<sp/>0;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a6462f888a8364035001ed2ec96ce4df2" kindref="member">push_back</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" kindref="member">value_type</ref>&amp;<sp/><ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>);</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a6462f888a8364035001ed2ec96ce4df2" kindref="member">push_back</ref>(<ref refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" kindref="member">value_type</ref>&amp;&amp;<sp/><ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>)<sp/></highlight><highlight class="keyword">noexcept</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a668ccd17e2d61c3cd348377f145910f2" kindref="member">pop_front</ref>();</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1abb81e36d276737bd49850c75df30cc97" kindref="member">reference</ref><sp/><ref refid="classcircular__buffer_1a0517c34460fc49b93c756078c3492c2d" kindref="member">front</ref>();</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1abb81e36d276737bd49850c75df30cc97" kindref="member">reference</ref><sp/><ref refid="classcircular__buffer_1a27589195863f071a6dd05580f64a8d92" kindref="member">back</ref>();<sp/></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1a802276d1b7ab7a74881650ae6f54ef27" kindref="member">const_reference</ref><sp/><ref refid="classcircular__buffer_1a0517c34460fc49b93c756078c3492c2d" kindref="member">front</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;<sp/></highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1a802276d1b7ab7a74881650ae6f54ef27" kindref="member">const_reference</ref><sp/><ref refid="classcircular__buffer_1a27589195863f071a6dd05580f64a8d92" kindref="member">back</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1aeef6f505f97e71e7a1303b4b94204b36" kindref="member">clear</ref>();</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a6d19b5589167888832acfa89cc8e9d52" kindref="member">empty</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a40e05a6819a6b08f5cc8d225e5f7f075" kindref="member">full</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/><ref refid="classcircular__buffer_1ab3636497e7708d4e22bb139a7cbc84bf" kindref="member">capacity</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/><ref refid="classcircular__buffer_1a7353055412749e48c2b68f2c251f5a48" kindref="member">size</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="105" refid="classcircular__buffer_1ae096681d726a1f5a8e580a391fb3f2a1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/><ref refid="classcircular__buffer_1ae096681d726a1f5a8e580a391fb3f2a1" kindref="member">buffer_size</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" kindref="member">value_type</ref>)*_max_size;};</highlight></codeline>
-<codeline lineno="106" refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1a4d73e3d69db8f909ce681362c9260093" kindref="member">const_pointer</ref><sp/><ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_buff.get();<sp/>}</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/></highlight></codeline>
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-<codeline lineno="110"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1a802276d1b7ab7a74881650ae6f54ef27" kindref="member">const_reference</ref><sp/><ref refid="classcircular__buffer_1af4c19f049100821e54628761da76ea1f" kindref="member">at</ref>(<ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/>index)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
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-<codeline lineno="112"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="113" refid="classcircular__buffer_1aef8b703c79f7a2ea230ad25d7127a5f5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator&lt;false&gt;</ref><sp/><ref refid="classcircular__buffer_1aef8b703c79f7a2ea230ad25d7127a5f5" kindref="member">iterator</ref>;</highlight></codeline>
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-<codeline lineno="115"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">iterator</ref><sp/><ref refid="classcircular__buffer_1ab765c493b4ea3ce786a612600c3be0d4" kindref="member">begin</ref>();</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">const_iterator</ref><sp/><ref refid="classcircular__buffer_1ab765c493b4ea3ce786a612600c3be0d4" kindref="member">begin</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">iterator</ref><sp/><ref refid="classcircular__buffer_1a11637bce13cfcfb51f0280ea41799138" kindref="member">end</ref>();</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">const_iterator</ref><sp/><ref refid="classcircular__buffer_1a11637bce13cfcfb51f0280ea41799138" kindref="member">end</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">const_iterator</ref><sp/><ref refid="classcircular__buffer_1af16d34657e5d45f96db84299418c2298" kindref="member">cbegin</ref>()<sp/>const<sp/>noexcept;</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">const_iterator</ref><sp/><ref refid="classcircular__buffer_1a6c811ddab26522c63507079dc8e7e694" kindref="member">cend</ref>()<sp/>const<sp/>noexcept;</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">iterator</ref><sp/><ref refid="classcircular__buffer_1a61e0261daf5aa75ecc9e5841a251b0f4" kindref="member">rbegin</ref>()<sp/>noexcept;</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">const_iterator</ref><sp/><ref refid="classcircular__buffer_1a61e0261daf5aa75ecc9e5841a251b0f4" kindref="member">rbegin</ref>()<sp/>const<sp/>noexcept;</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">iterator</ref><sp/><ref refid="classcircular__buffer_1a91a65d976fbbf2f63deef4f161b9b042" kindref="member">rend</ref>()<sp/>noexcept;</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">const_iterator</ref><sp/><ref refid="classcircular__buffer_1a91a65d976fbbf2f63deef4f161b9b042" kindref="member">rend</ref>()<sp/>const<sp/>noexcept;</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="128"><highlight class="normal">private:</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>_increment_bufferstate();</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>_decrement_bufferstate();</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/>mutable<sp/>std::mutex<sp/>_mtx;</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/>std::unique_ptr&lt;<ref refid="classcircular__buffer_1a4ba0fb5a52c15ba090d9b7dc000b8a3c" kindref="member">value_type</ref>[]&gt;<sp/>_buff;</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/>_head<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/>_tail<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/>_size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="136" refid="structcircular__buffer_1_1_buffer_iterator_1a9a062fc76e5dd9ea4867eaabce6b3df4" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/>_max_size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/>template&lt;</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>isConst<sp/>=<sp/>false&gt;</highlight></codeline>
-<codeline lineno="139" refid="structcircular__buffer_1_1_buffer_iterator" refkind="compound"><highlight class="normal"><sp/><sp/>struct<sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>{</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcircular__buffer" kindref="compound">circular_buffer</ref>&lt;T&gt;;</highlight></codeline>
-<codeline lineno="142" refid="structcircular__buffer_1_1_buffer_iterator_1a60ca965f66f481374f0b048e23b0a90b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::random_access_iterator_tag<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a60ca965f66f481374f0b048e23b0a90b" kindref="member">iterator_category</ref>;</highlight></codeline>
-<codeline lineno="143" refid="structcircular__buffer_1_1_buffer_iterator_1a8a32fa38e1b1f29a342d18ad82f6ea3e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>ptrdiff_t<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a8a32fa38e1b1f29a342d18ad82f6ea3e" kindref="member">difference_type</ref>;</highlight></codeline>
-<codeline lineno="144" refid="structcircular__buffer_1_1_buffer_iterator_1ad75201859a8542efdb87f4ba020fd680" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>T<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1ad75201859a8542efdb87f4ba020fd680" kindref="member">value_type</ref>;</highlight></codeline>
-<codeline lineno="145" refid="structcircular__buffer_1_1_buffer_iterator_1aec25deeac0e9c73e72c8c63896e41d70" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::conditional&lt;isConst,<sp/>const<sp/>value_type&amp;,<sp/>value_type&amp;&gt;::type<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1aec25deeac0e9c73e72c8c63896e41d70" kindref="member">reference</ref>;</highlight></codeline>
-<codeline lineno="146" refid="structcircular__buffer_1_1_buffer_iterator_1adbce020fdde8b86493c407ecec6962fb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::conditional&lt;isConst,<sp/>const<sp/>value_type*,<sp/>value_type*&gt;::type<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1adbce020fdde8b86493c407ecec6962fb" kindref="member">pointer</ref>;</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::conditional&lt;isConst,<sp/>const<sp/>circular_buffer&lt;value_type&gt;*,</highlight></codeline>
-<codeline lineno="148" refid="structcircular__buffer_1_1_buffer_iterator_1a9ac8d7daf39b6bffa078883fc2955eca" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcircular__buffer" kindref="compound">circular_buffer&lt;value_type&gt;</ref>*&gt;::type<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a9ac8d7daf39b6bffa078883fc2955eca" kindref="member">cbuf_pointer</ref>;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a9ac8d7daf39b6bffa078883fc2955eca" kindref="member">cbuf_pointer</ref><sp/>_ptrToBuffer;</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/>_offset;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/>_index;</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>_reverse;</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>_comparable(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator&lt;isConst&gt;</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(_ptrToBuffer<sp/>==<sp/>other._ptrToBuffer)&amp;&amp;(_reverse<sp/>==<sp/>other._reverse);</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="160" refid="structcircular__buffer_1_1_buffer_iterator_1a46cab09ff5f64d1010b65235b6ad9077" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a46cab09ff5f64d1010b65235b6ad9077" kindref="member">BufferIterator</ref>()</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>:_ptrToBuffer{nullptr},<sp/>_offset{0},<sp/>_index{0},<sp/>_reverse{false}{}</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="163" refid="structcircular__buffer_1_1_buffer_iterator_1a5a92e722221e4b9e46eea2cad4cbcfe7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a5a92e722221e4b9e46eea2cad4cbcfe7" kindref="member">BufferIterator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator&lt;false&gt;</ref>&amp;<sp/>it)</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>:_ptrToBuffer{it._ptrToBuffer},</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_offset{it._offset},</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_index{it._index},</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_reverse{it._reverse}{}</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="169" refid="structcircular__buffer_1_1_buffer_iterator_1afebb8203280812a17c95cc4b7492c639" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1aec25deeac0e9c73e72c8c63896e41d70" kindref="member">reference</ref><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1afebb8203280812a17c95cc4b7492c639" kindref="member">operator*</ref>(){</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(_reverse)</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*_ptrToBuffer)[(_ptrToBuffer-&gt;size()<sp/>-<sp/>_index<sp/>-<sp/>1)];</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(*_ptrToBuffer)[_index];</highlight></codeline>
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-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="175" refid="structcircular__buffer_1_1_buffer_iterator_1ad664e2b1cab5253bef7f6a89ff91c429" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1adbce020fdde8b86493c407ecec6962fb" kindref="member">pointer</ref><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1ad664e2b1cab5253bef7f6a89ff91c429" kindref="member">operator-&gt;</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>&amp;(operator*());<sp/>}</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="177" refid="structcircular__buffer_1_1_buffer_iterator_1ab7413a7e4b429f47d83a23ca2f182d21" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1aec25deeac0e9c73e72c8c63896e41d70" kindref="member">reference</ref><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1ab7413a7e4b429f47d83a23ca2f182d21" kindref="member">operator[]</ref>(<ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">size_type</ref><sp/>index){</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/>iter<sp/>=<sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>iter._index<sp/>+=<sp/>index;</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*iter;</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="183" refid="structcircular__buffer_1_1_buffer_iterator_1a19277f0e53d7024a48f1d89a44cf1e83" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a19277f0e53d7024a48f1d89a44cf1e83" kindref="member">operator++</ref>(){</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++_index;</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="188" refid="structcircular__buffer_1_1_buffer_iterator_1a5b40c121b615e5cc173ae95c0fd6a8e5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a5b40c121b615e5cc173ae95c0fd6a8e5" kindref="member">operator++</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">){</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/>iter<sp/>=<sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++_index;</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>iter;</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="194" refid="structcircular__buffer_1_1_buffer_iterator_1a9b20ba195c03c9159b0190cb15a5e29b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a9b20ba195c03c9159b0190cb15a5e29b" kindref="member">operator--</ref>(){</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>--_index;</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="199" refid="structcircular__buffer_1_1_buffer_iterator_1abc7d062f3cee6e34c46d51964c115d0a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1abc7d062f3cee6e34c46d51964c115d0a" kindref="member">operator--</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">){</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/>iter<sp/>=<sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>--_index;</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>iter;</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="205" refid="structcircular__buffer_1_1_buffer_iterator_1a3a4f126f903a1ba2c69ddb69bb729342" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a3a4f126f903a1ba2c69ddb69bb729342" kindref="member">operator+</ref>(<ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/>lhsiter,<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a8a32fa38e1b1f29a342d18ad82f6ea3e" kindref="member">difference_type</ref><sp/>n){</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>lhsiter._index<sp/>+=<sp/>n;</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>lhsiter;</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="210" refid="structcircular__buffer_1_1_buffer_iterator_1ade0f7b744fc9bc2630024a342fc046da" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1ade0f7b744fc9bc2630024a342fc046da" kindref="member">operator+</ref>(<ref refid="structcircular__buffer_1_1_buffer_iterator_1a8a32fa38e1b1f29a342d18ad82f6ea3e" kindref="member">difference_type</ref><sp/>n,<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/>rhsiter){</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>rhsiter._index<sp/>+=<sp/>n;</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>rhsiter;</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="216" refid="structcircular__buffer_1_1_buffer_iterator_1a2f62102ffc533a3fdd4cc50927cc2f4a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a2f62102ffc533a3fdd4cc50927cc2f4a" kindref="member">operator+=</ref>(<ref refid="structcircular__buffer_1_1_buffer_iterator_1a8a32fa38e1b1f29a342d18ad82f6ea3e" kindref="member">difference_type</ref><sp/>n){</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_index<sp/>+=<sp/>n;</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="221" refid="structcircular__buffer_1_1_buffer_iterator_1aa4213d75194ca90e018c8e82e6bc995d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1aa4213d75194ca90e018c8e82e6bc995d" kindref="member">operator-</ref>(<ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref><sp/>lhsiter,<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a8a32fa38e1b1f29a342d18ad82f6ea3e" kindref="member">difference_type</ref><sp/>n){</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>lhsiter._index<sp/>-=<sp/>n;</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>lhsiter;</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="226" refid="structcircular__buffer_1_1_buffer_iterator_1a8835a2b92ca9d6d16f3499e89a982b92" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a8a32fa38e1b1f29a342d18ad82f6ea3e" kindref="member">difference_type</ref><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a8835a2b92ca9d6d16f3499e89a982b92" kindref="member">operator-</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/>lhsiter,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/>rhsiter){</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>lhsiter._index<sp/>-<sp/>rhsiter._index;</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="231" refid="structcircular__buffer_1_1_buffer_iterator_1ad88531bdd68054b801406da449a27a3a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1ad88531bdd68054b801406da449a27a3a" kindref="member">operator-=</ref>(<ref refid="structcircular__buffer_1_1_buffer_iterator_1a8a32fa38e1b1f29a342d18ad82f6ea3e" kindref="member">difference_type</ref><sp/>n){</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>_index<sp/>-=<sp/>n;</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="236" refid="structcircular__buffer_1_1_buffer_iterator_1a08a9cc8a8098aa9458b5a208b5ea5dab" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a08a9cc8a8098aa9458b5a208b5ea5dab" kindref="member">operator==</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!_comparable(other))</highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((_index<sp/>==<sp/>other._index)&amp;&amp;(_offset<sp/>==<sp/>other._offset));</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="242" refid="structcircular__buffer_1_1_buffer_iterator_1ad7dd157b08d198802667901e34dd3cf9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1ad7dd157b08d198802667901e34dd3cf9" kindref="member">operator!=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!_comparable(other))</highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((_index<sp/>!=<sp/>other._index)||(_offset<sp/>!=<sp/>other._offset));</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="248" refid="structcircular__buffer_1_1_buffer_iterator_1a547ded9aa5076c56d84901e45474ef5b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a547ded9aa5076c56d84901e45474ef5b" kindref="member">operator&lt;</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!_comparable(other))</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((_index<sp/>+<sp/>_offset)&lt;(other._index+other._offset));</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="254" refid="structcircular__buffer_1_1_buffer_iterator_1a0f35df4cb266437885a253ef64b8a6e4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a0f35df4cb266437885a253ef64b8a6e4" kindref="member">operator&gt;</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!_comparable(other))</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((_index<sp/>+<sp/>_offset)&gt;(other._index+other._offset));</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="260" refid="structcircular__buffer_1_1_buffer_iterator_1abb59881ad44cf3c650579e68ced47926" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1abb59881ad44cf3c650579e68ced47926" kindref="member">operator&lt;=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!_comparable(other))</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((_index<sp/>+<sp/>_offset)&lt;=(other._index+other._offset));</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="266" refid="structcircular__buffer_1_1_buffer_iterator_1a87fd070cdffd2152997c7fc00f8d6937" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator_1a87fd070cdffd2152997c7fc00f8d6937" kindref="member">operator&gt;=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcircular__buffer_1_1_buffer_iterator" kindref="compound">BufferIterator</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!_comparable(other))</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>((_index<sp/>+<sp/>_offset)&gt;=(other._index+other._offset));</highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="272"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"></highlight></codeline>
-<codeline lineno="274"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="276" refid="classcircular__buffer_1a40e05a6819a6b08f5cc8d225e5f7f075" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a40e05a6819a6b08f5cc8d225e5f7f075" kindref="member">circular_buffer&lt;T&gt;::full</ref>()</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_size<sp/>==<sp/>_max_size;</highlight></codeline>
-<codeline lineno="278"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"></highlight></codeline>
-<codeline lineno="280"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="282" refid="classcircular__buffer_1a6d19b5589167888832acfa89cc8e9d52" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a6d19b5589167888832acfa89cc8e9d52" kindref="member">circular_buffer&lt;T&gt;::empty</ref>()</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_size<sp/>==<sp/>0;</highlight></codeline>
-<codeline lineno="284"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"></highlight></codeline>
-<codeline lineno="286"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="288" refid="classcircular__buffer_1ab3636497e7708d4e22bb139a7cbc84bf" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">circular_buffer&lt;T&gt;::size_type</ref><sp/><ref refid="classcircular__buffer_1ab3636497e7708d4e22bb139a7cbc84bf" kindref="member">circular_buffer&lt;T&gt;::capacity</ref>()</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_max_size;</highlight></codeline>
-<codeline lineno="290"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"></highlight></codeline>
-<codeline lineno="292"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="294" refid="classcircular__buffer_1aeef6f505f97e71e7a1303b4b94204b36" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><ref refid="classcircular__buffer_1aeef6f505f97e71e7a1303b4b94204b36" kindref="member">circular_buffer&lt;T&gt;::clear</ref>(){</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"><sp/><sp/>_head<sp/>=<sp/>_tail<sp/>=<sp/>_size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="297"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="301" refid="classcircular__buffer_1a7353055412749e48c2b68f2c251f5a48" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1acbbb44fedf64a034c6769df4488cb683" kindref="member">circular_buffer&lt;T&gt;::size_type</ref><sp/><ref refid="classcircular__buffer_1a7353055412749e48c2b68f2c251f5a48" kindref="member">circular_buffer&lt;T&gt;::size</ref>()</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_size;</highlight></codeline>
-<codeline lineno="304"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"></highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="307"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="308" refid="classcircular__buffer_1a0517c34460fc49b93c756078c3492c2d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1abb81e36d276737bd49850c75df30cc97" kindref="member">circular_buffer&lt;T&gt;::reference</ref><sp/><ref refid="classcircular__buffer_1a0517c34460fc49b93c756078c3492c2d" kindref="member">circular_buffer&lt;T&gt;::front</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="classcircular__buffer_1a6d19b5589167888832acfa89cc8e9d52" kindref="member">empty</ref>())</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::length_error(</highlight><highlight class="stringliteral">&quot;front<sp/>function<sp/>called<sp/>on<sp/>empty<sp/>buffer&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_buff[_tail];</highlight></codeline>
-<codeline lineno="313"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"></highlight></codeline>
-<codeline lineno="315"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="317" refid="classcircular__buffer_1a27589195863f071a6dd05580f64a8d92" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1abb81e36d276737bd49850c75df30cc97" kindref="member">circular_buffer&lt;T&gt;::reference</ref><sp/><ref refid="classcircular__buffer_1a27589195863f071a6dd05580f64a8d92" kindref="member">circular_buffer&lt;T&gt;::back</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="classcircular__buffer_1a6d19b5589167888832acfa89cc8e9d52" kindref="member">empty</ref>())</highlight></codeline>
-<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::length_error(</highlight><highlight class="stringliteral">&quot;back<sp/>function<sp/>called<sp/>on<sp/>empty<sp/>buffer&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_head<sp/>==<sp/>0<sp/>?<sp/>_buff[_max_size<sp/>-<sp/>1]<sp/>:<sp/>_buff[_head<sp/>-<sp/>1];</highlight></codeline>
-<codeline lineno="322"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"></highlight></codeline>
-<codeline lineno="324"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="326" refid="classcircular__buffer_1a9d2f74aa0102723f08876f9b0183b479" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a802276d1b7ab7a74881650ae6f54ef27" kindref="member">circular_buffer&lt;T&gt;::const_reference</ref><sp/><ref refid="classcircular__buffer_1a0517c34460fc49b93c756078c3492c2d" kindref="member">circular_buffer&lt;T&gt;::front</ref>()</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="328"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="classcircular__buffer_1a6d19b5589167888832acfa89cc8e9d52" kindref="member">empty</ref>())</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::length_error(</highlight><highlight class="stringliteral">&quot;front<sp/>function<sp/>called<sp/>on<sp/>empty<sp/>buffer&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="330"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_buff[_tail];</highlight></codeline>
-<codeline lineno="331"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="332"><highlight class="normal"></highlight></codeline>
-<codeline lineno="333"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="334"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="335" refid="classcircular__buffer_1adebc9cc368ae3f2b7655583f57fff10d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a802276d1b7ab7a74881650ae6f54ef27" kindref="member">circular_buffer&lt;T&gt;::const_reference</ref><sp/><ref refid="classcircular__buffer_1a27589195863f071a6dd05580f64a8d92" kindref="member">circular_buffer&lt;T&gt;::back</ref>()</highlight><highlight class="keyword"><sp/>const</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="336"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="classcircular__buffer_1a6d19b5589167888832acfa89cc8e9d52" kindref="member">empty</ref>())</highlight></codeline>
-<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::length_error(</highlight><highlight class="stringliteral">&quot;back<sp/>function<sp/>called<sp/>on<sp/>empty<sp/>buffer&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_head<sp/>==<sp/>0<sp/>?<sp/>_buff[_max_size<sp/>-<sp/>1]<sp/>:<sp/>_buff[_head<sp/>-<sp/>1];</highlight></codeline>
-<codeline lineno="340"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="341"><highlight class="normal"></highlight></codeline>
-<codeline lineno="342"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="343"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="344" refid="classcircular__buffer_1a6462f888a8364035001ed2ec96ce4df2" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a6462f888a8364035001ed2ec96ce4df2" kindref="member">circular_buffer&lt;T&gt;::push_back</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T&amp;<sp/><ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>){</highlight></codeline>
-<codeline lineno="345"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//if(full())</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="347"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/><sp/><sp/><sp/>_buff[_tail].~T();</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="348"><highlight class="normal"><sp/><sp/>_buff[_head]<sp/>=<sp/><ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>;</highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/>_increment_bufferstate();</highlight></codeline>
-<codeline lineno="350"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"></highlight></codeline>
-<codeline lineno="352"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="353"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="354" refid="classcircular__buffer_1a552fabf6e42b98ce03646eb687d812cf" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a6462f888a8364035001ed2ec96ce4df2" kindref="member">circular_buffer&lt;T&gt;::push_back</ref>(T&amp;&amp;<sp/><ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>)<sp/></highlight><highlight class="keyword">noexcept</highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="355"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"><sp/><sp/>_buff[_head]<sp/>=<sp/>std::move(<ref refid="classcircular__buffer_1ab8f5ceaea3f336b10c4516a6a3ff9d84" kindref="member">data</ref>);</highlight></codeline>
-<codeline lineno="357"><highlight class="normal"><sp/><sp/>_increment_bufferstate();</highlight></codeline>
-<codeline lineno="358"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"></highlight></codeline>
-<codeline lineno="360"><highlight class="normal"></highlight></codeline>
-<codeline lineno="361"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="362"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="363"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer" kindref="compound">circular_buffer&lt;T&gt;::_increment_bufferstate</ref>(){</highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="classcircular__buffer_1a40e05a6819a6b08f5cc8d225e5f7f075" kindref="member">full</ref>())</highlight></codeline>
-<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/>_tail<sp/>=<sp/>(_tail<sp/>+<sp/>1)%_max_size;</highlight></codeline>
-<codeline lineno="366"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/>++_size;</highlight></codeline>
-<codeline lineno="368"><highlight class="normal"><sp/><sp/>_head<sp/>=<sp/>(_head<sp/>+<sp/>1)%_max_size;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="369"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="370"><highlight class="normal"></highlight></codeline>
-<codeline lineno="371"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="372"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="373" refid="classcircular__buffer_1a668ccd17e2d61c3cd348377f145910f2" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a668ccd17e2d61c3cd348377f145910f2" kindref="member">circular_buffer&lt;T&gt;::pop_front</ref>(){</highlight></codeline>
-<codeline lineno="374"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="375"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="classcircular__buffer_1a6d19b5589167888832acfa89cc8e9d52" kindref="member">empty</ref>())</highlight></codeline>
-<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::length_error(</highlight><highlight class="stringliteral">&quot;pop_front<sp/>called<sp/>on<sp/>empty<sp/>buffer&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="377"><highlight class="normal"><sp/><sp/>_decrement_bufferstate();</highlight></codeline>
-<codeline lineno="378"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="379"><highlight class="normal"></highlight></codeline>
-<codeline lineno="380"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="381"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="382"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer" kindref="compound">circular_buffer&lt;T&gt;::_decrement_bufferstate</ref>(){</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/>--_size;</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/>_tail<sp/>=<sp/>(_tail<sp/>+<sp/>1)%_max_size;</highlight></codeline>
-<codeline lineno="385"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="386"><highlight class="normal"></highlight></codeline>
-<codeline lineno="387"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="388"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="389" refid="classcircular__buffer_1a72887f0f842db161fb697d5390e862f9" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1abb81e36d276737bd49850c75df30cc97" kindref="member">circular_buffer&lt;T&gt;::reference</ref><sp/><ref refid="classcircular__buffer_1a16b624b231f9ae9c0307a35c1284aa5a" kindref="member">circular_buffer&lt;T&gt;::operator[]</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index)<sp/>{</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="391"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">((index&lt;0)||(index&gt;=_size))</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::out_of_range(</highlight><highlight class="stringliteral">&quot;Index<sp/>is<sp/>out<sp/>of<sp/>Range<sp/>of<sp/>buffer<sp/>size&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="393"><highlight class="normal"><sp/><sp/>index<sp/>+=<sp/>_tail;</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"><sp/><sp/>index<sp/>%=<sp/>_max_size;</highlight></codeline>
-<codeline lineno="395"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_buff[index];</highlight></codeline>
-<codeline lineno="396"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="397"><highlight class="normal"></highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="399"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="400" refid="classcircular__buffer_1a16b624b231f9ae9c0307a35c1284aa5a" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1a802276d1b7ab7a74881650ae6f54ef27" kindref="member">circular_buffer&lt;T&gt;::const_reference</ref><sp/><ref refid="classcircular__buffer_1a16b624b231f9ae9c0307a35c1284aa5a" kindref="member">circular_buffer&lt;T&gt;::operator[]</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="401"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">((index&lt;0)||(index&gt;=_size))</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::out_of_range(</highlight><highlight class="stringliteral">&quot;Index<sp/>is<sp/>out<sp/>of<sp/>Range<sp/>of<sp/>buffer<sp/>size&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="404"><highlight class="normal"><sp/><sp/>index<sp/>+=<sp/>_tail;</highlight></codeline>
-<codeline lineno="405"><highlight class="normal"><sp/><sp/>index<sp/>%=<sp/>_max_size;</highlight></codeline>
-<codeline lineno="406"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_buff[index];</highlight></codeline>
-<codeline lineno="407"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="408"><highlight class="normal"></highlight></codeline>
-<codeline lineno="409"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="410"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
-<codeline lineno="411" refid="classcircular__buffer_1a9e21c844a3761292d03215ba34ef3bc6" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/><ref refid="classcircular__buffer_1abb81e36d276737bd49850c75df30cc97" kindref="member">circular_buffer&lt;T&gt;::reference</ref><sp/><ref refid="classcircular__buffer_1af4c19f049100821e54628761da76ea1f" kindref="member">circular_buffer&lt;T&gt;::at</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>index)<sp/>{</highlight></codeline>
-<codeline lineno="412"><highlight class="normal"><sp/><sp/>std::lock_guard&lt;std::mutex&gt;<sp/>_lck(_mtx);</highlight></codeline>
-<codeline lineno="413"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">((index&lt;0)||(index&gt;=_size))</highlight></codeline>
-<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::out_of_range(</highlight><highlight class="stringliteral">&quot;Index<sp/>is<sp/>out<sp/>of<sp/>Range<sp/>of<sp/>buffer<sp/>size&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="415"><highlight class="normal"><sp/><sp/>index<sp/>+=<sp/>_tail;</highlight></codeline>
-<codeline lineno="416"><highlight class="normal"><sp/><sp/>index<sp/>%=<sp/>_max_size;</highlight></codeline>
-<codeline lineno="417"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>_buff[index];</highlight></codeline>
-<codeline lineno="418"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="419"><highlight class="normal"></highlight></codeline>
-<codeline lineno="420"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal">&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="421"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight></codeline>
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-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/circular_buffer.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_add_disk.xml b/doxyxml/class_add_disk.xml
deleted file mode 100644
index b1ec4fe..0000000
--- a/doxyxml/class_add_disk.xml
+++ /dev/null
@@ -1,229 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_add_disk" kind="class" language="C++" prot="public">
-    <compoundname>AddDisk</compoundname>
-    <includes refid="_add_disk_8_h" local="no">AddDisk.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_add_disk_1a5b56a34a8a1baa6efe88c29a26f57535" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; AddDisk::d</definition>
-        <argsstring></argsstring>
-        <name>d</name>
-        <qualifiedname>AddDisk::d</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/AddDisk.H" line="12" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/AddDisk.H" bodystart="12" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_add_disk_1a8d0125d455ac9132bc4e11222e4c2bc0" prot="private" static="no" mutable="no">
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diff --git a/doxyxml/class_add_spheres.xml b/doxyxml/class_add_spheres.xml
deleted file mode 100644
index 67e09bc..0000000
--- a/doxyxml/class_add_spheres.xml
+++ /dev/null
@@ -1,229 +0,0 @@
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diff --git a/doxyxml/class_ascii_histo.xml b/doxyxml/class_ascii_histo.xml
deleted file mode 100644
index 14a876f..0000000
--- a/doxyxml/class_ascii_histo.xml
+++ /dev/null
@@ -1,279 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <compoundname>AsciiHisto</compoundname>
-    <includes refid="_ascii_histo_8_h" local="no">AsciiHisto.H</includes>
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-        <defval>double</defval>
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-      <memberdef kind="variable" id="class_ascii_histo_1a68a4d018360a5688218bd4779626dcec" prot="private" static="no" mutable="no">
-        <type>T</type>
-        <definition>T AsciiHisto&lt; T &gt;::beg</definition>
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-        <qualifiedname>AsciiHisto::beg</qualifiedname>
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-        <referencedby refid="class_ascii_histo_1ad835bd7dc4e56681ecf4408883f56bfb" compoundref="_ascii_histo_8_h" startline="88" endline="95">AsciiHisto&lt; T &gt;::AsciiHisto</referencedby>
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-        <referencedby refid="class_ascii_histo_1ae482bd51c52a4e335b85aeca75749ee8" compoundref="_ascii_histo_8_h" startline="98" endline="138">AsciiHisto&lt; T &gt;::operator()</referencedby>
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-        <location file="/home/weinberg/Projects/EXP/include/AsciiHisto.H" line="60" column="3" bodyfile="/home/weinberg/Projects/EXP/include/AsciiHisto.H" bodystart="60" bodyend="78"/>
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diff --git a/doxyxml/class_axi_sym_biorth.xml b/doxyxml/class_axi_sym_biorth.xml
deleted file mode 100644
index c3ea8cd..0000000
--- a/doxyxml/class_axi_sym_biorth.xml
+++ /dev/null
@@ -1,568 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <compoundname>AxiSymBiorth</compoundname>
-    <basecompoundref refid="class_biorth" prot="public" virt="non-virtual">Biorth</basecompoundref>
-    <derivedcompoundref refid="class_b_s_disk" prot="public" virt="non-virtual">BSDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_b_s_sphere" prot="public" virt="non-virtual">BSSphere</derivedcompoundref>
-    <derivedcompoundref refid="class_biorth_grid" prot="public" virt="non-virtual">BiorthGrid</derivedcompoundref>
-    <derivedcompoundref refid="class_c_b_disk" prot="public" virt="non-virtual">CBDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_c_b_sphere" prot="public" virt="non-virtual">CBSphere</derivedcompoundref>
-    <derivedcompoundref refid="class_h_q_sphere" prot="public" virt="non-virtual">HQSphere</derivedcompoundref>
-    <derivedcompoundref refid="class_sphere_s_l" prot="public" virt="non-virtual">SphereSL</derivedcompoundref>
-    <includes refid="biorth_8_h" local="no">biorth.H</includes>
-    <sectiondef kind="friend">
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-        <type>class</type>
-        <definition>friend class BiorthWake</definition>
-        <argsstring></argsstring>
-        <name>BiorthWake</name>
-        <qualifiedname>AxiSymBiorth::BiorthWake</qualifiedname>
-        <param>
-          <type><ref refid="class_biorth_wake" kindref="compound">BiorthWake</ref></type>
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-        <type>int</type>
-        <definition>int AxiSymBiorth::dof</definition>
-        <argsstring></argsstring>
-        <name>dof</name>
-        <qualifiedname>AxiSymBiorth::dof</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <type></type>
-        <definition>AxiSymBiorth::AxiSymBiorth</definition>
-        <argsstring>(int DOF=0)</argsstring>
-        <name>AxiSymBiorth</name>
-        <qualifiedname>AxiSymBiorth::AxiSymBiorth</qualifiedname>
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-          <declname>DOF</declname>
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-        <type>double</type>
-        <definition>double AxiSymBiorth::get_dens</definition>
-        <argsstring>(double r, int l, const Eigen::VectorXd &amp;coef)</argsstring>
-        <name>get_dens</name>
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-        <definition>int AxiSymBiorth::get_dof</definition>
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-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const int</type>
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-        <param>
-          <type>const double</type>
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-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="59" column="18"/>
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-        <type>double</type>
-        <definition>virtual double AxiSymBiorth::r_to_rb</definition>
-        <argsstring>(double const)=0</argsstring>
-        <name>r_to_rb</name>
-        <qualifiedname>AxiSymBiorth::r_to_rb</qualifiedname>
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-        <reimplementedby refid="class_b_s_sphere_1a81281856517002989aae97dd6b9dea1c">r_to_rb</reimplementedby>
-        <reimplementedby refid="class_c_b_disk_1a7b2573edfceba78c6085161c4be303ab">r_to_rb</reimplementedby>
-        <reimplementedby refid="class_b_s_disk_1afefe9914f9a1a2106ed2488054b172ca">r_to_rb</reimplementedby>
-        <reimplementedby refid="class_sphere_s_l_1ab9f7e8bfe2355df79dc7e745d2af063e">r_to_rb</reimplementedby>
-        <reimplementedby refid="class_c_b_sphere_1a7feeedd098bdabc064714e74ddaff5b2">r_to_rb</reimplementedby>
-        <reimplementedby refid="class_h_q_sphere_1a5339ea70096852fe29b59e905a5696fe">r_to_rb</reimplementedby>
-        <param>
-          <type>double const</type>
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-        </briefdescription>
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-        <type>double</type>
-        <definition>virtual double AxiSymBiorth::rb_max</definition>
-        <argsstring>(void)=0</argsstring>
-        <name>rb_max</name>
-        <qualifiedname>AxiSymBiorth::rb_max</qualifiedname>
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-        <reimplementedby refid="class_b_s_disk_1ae740485f16b8b4058f8fedb3b0ebd9e2">rb_max</reimplementedby>
-        <reimplementedby refid="class_sphere_s_l_1a490f65d960649770981d83d66d958435">rb_max</reimplementedby>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
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-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="70" column="18"/>
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-      <memberdef kind="function" id="class_axi_sym_biorth_1a732c3f77a9d9968f5a06ba7d57c69832" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double AxiSymBiorth::rb_min</definition>
-        <argsstring>(void)=0</argsstring>
-        <name>rb_min</name>
-        <qualifiedname>AxiSymBiorth::rb_min</qualifiedname>
-        <reimplementedby refid="class_biorth_grid_1a8136aca7e670b7d53af834872a36851c">rb_min</reimplementedby>
-        <reimplementedby refid="class_c_b_sphere_1a55d6ae71c13aeeb6701b9a1be043b954">rb_min</reimplementedby>
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-        <reimplementedby refid="class_b_s_sphere_1ab54f1a8062883e7dd6f0e117a43eeb59">rb_min</reimplementedby>
-        <reimplementedby refid="class_c_b_disk_1aeefbbc5e3a2ca01af2078cd8400f5606">rb_min</reimplementedby>
-        <reimplementedby refid="class_b_s_disk_1a30cc2dcd5a418aa9930df28b54aa79c6">rb_min</reimplementedby>
-        <reimplementedby refid="class_sphere_s_l_1a6f8a05e49cc970cbf590cd237ca3cd25">rb_min</reimplementedby>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="69" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axi_sym_biorth_1a3815fa706249dff779ff597d8ab37c71" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double AxiSymBiorth::rb_to_r</definition>
-        <argsstring>(double const)=0</argsstring>
-        <name>rb_to_r</name>
-        <qualifiedname>AxiSymBiorth::rb_to_r</qualifiedname>
-        <reimplementedby refid="class_b_s_sphere_1a16b38cfe134475522d1d6ab0515852e7">rb_to_r</reimplementedby>
-        <reimplementedby refid="class_c_b_disk_1ad60036a7c84e1d8f1e19ef315c8e5eff">rb_to_r</reimplementedby>
-        <reimplementedby refid="class_b_s_disk_1af996ebef3ef60b1c15a9e3f97db4a427">rb_to_r</reimplementedby>
-        <reimplementedby refid="class_biorth_grid_1a189de4839a2992723978e4ec20d27d2d">rb_to_r</reimplementedby>
-        <reimplementedby refid="class_sphere_s_l_1a670017621747229de479ba578cef996a">rb_to_r</reimplementedby>
-        <reimplementedby refid="class_c_b_sphere_1aac3759c7d3a469085bce3564b1fbef78">rb_to_r</reimplementedby>
-        <reimplementedby refid="class_h_q_sphere_1a8c4a12167858d921738b4e3c70a342b9">rb_to_r</reimplementedby>
-        <param>
-          <type>double const</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="65" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axi_sym_biorth_1adcf402d63d58581bfb671cc97b213222" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual AxiSymBiorth::~AxiSymBiorth</definition>
-        <argsstring>()</argsstring>
-        <name>~AxiSymBiorth</name>
-        <qualifiedname>AxiSymBiorth::~AxiSymBiorth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="54" column="11" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="54" bodyend="54"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>AxiSymBiorth</label>
-        <link refid="class_axi_sym_biorth"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>BSDisk</label>
-        <link refid="class_b_s_disk"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>BSSphere</label>
-        <link refid="class_b_s_sphere"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
-      </node>
-      <node id="5">
-        <label>BiorthGrid</label>
-        <link refid="class_biorth_grid"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>CBDisk</label>
-        <link refid="class_c_b_disk"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>CBSphere</label>
-        <link refid="class_c_b_sphere"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>HQSphere</label>
-        <link refid="class_h_q_sphere"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>SphereSL</label>
-        <link refid="class_sphere_s_l"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>AxiSymBiorth</label>
-        <link refid="class_axi_sym_biorth"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="43" column="1" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="44" bodyend="77"/>
-    <listofallmembers>
-      <member refid="class_axi_sym_biorth_1a5ab6aaba58d2c9115a111a5383158518" prot="public" virt="non-virtual"><scope>AxiSymBiorth</scope><name>AxiSymBiorth</name></member>
-      <member refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" prot="public" virt="non-virtual"><scope>AxiSymBiorth</scope><name>BiorthID</name></member>
-      <member refid="class_axi_sym_biorth_1ab8503e21d6282991853c921409deb150" prot="private" virt="non-virtual"><scope>AxiSymBiorth</scope><name>BiorthWake</name></member>
-      <member refid="class_biorth_1a3331c0ec9dabbed562c32c3d59c7b1bb" prot="public" virt="non-virtual"><scope>AxiSymBiorth</scope><name>bomb</name></member>
-      <member refid="class_axi_sym_biorth_1aaaf67379cdeb608b5f9c07509bb22631" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>d_r_to_rb</name></member>
-      <member refid="class_axi_sym_biorth_1a6cb90b729dbfb31340bf8930049df4cd" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>dens</name></member>
-      <member refid="class_axi_sym_biorth_1a6222c8a860d4e41a3d81b74d790442c8" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>dens</name></member>
-      <member refid="class_axi_sym_biorth_1a9d37a4dad785da836b339264b6176fc2" prot="protected" virt="non-virtual"><scope>AxiSymBiorth</scope><name>dof</name></member>
-      <member refid="class_axi_sym_biorth_1a87004c3a9f3587d69b8e131389d53046" prot="public" virt="non-virtual"><scope>AxiSymBiorth</scope><name>get_dens</name></member>
-      <member refid="class_axi_sym_biorth_1a9e4634e741f090bd7a2c088750d894e4" prot="public" virt="non-virtual"><scope>AxiSymBiorth</scope><name>get_dof</name></member>
-      <member refid="class_axi_sym_biorth_1a1220954284feb464502dd18a8a74440b" prot="public" virt="non-virtual"><scope>AxiSymBiorth</scope><name>get_potl</name></member>
-      <member refid="class_biorth_1a732367609f458cf4128bb37f2641c30b" prot="public" virt="non-virtual"><scope>AxiSymBiorth</scope><name>id</name></member>
-      <member refid="class_biorth_1a582200336065fac43a3282ee0671cffb" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>krnl</name></member>
-      <member refid="class_biorth_1a4997a44fb308362868547f4eb0f23c5a" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>norm</name></member>
-      <member refid="class_axi_sym_biorth_1aaec9137305d7c2eed46ca59c5ea777b1" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>potl</name></member>
-      <member refid="class_axi_sym_biorth_1a2216fefb9a71a8dcdd378da8c3d82fbb" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>potl</name></member>
-      <member refid="class_axi_sym_biorth_1a63c2bf04065efbbdcb005377836e0894" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>potlR</name></member>
-      <member refid="class_axi_sym_biorth_1afa024ea053a13ae6094ed1ee65653eac" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>potlRZ</name></member>
-      <member refid="class_axi_sym_biorth_1a5fea78e59e755b9d3e05965b223f10aa" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>r_to_rb</name></member>
-      <member refid="class_axi_sym_biorth_1a8a0737fc879f5950452fd0a0b895a57b" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>rb_max</name></member>
-      <member refid="class_axi_sym_biorth_1a732c3f77a9d9968f5a06ba7d57c69832" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>rb_min</name></member>
-      <member refid="class_axi_sym_biorth_1a3815fa706249dff779ff597d8ab37c71" prot="public" virt="pure-virtual"><scope>AxiSymBiorth</scope><name>rb_to_r</name></member>
-      <member refid="class_axi_sym_biorth_1adcf402d63d58581bfb671cc97b213222" prot="public" virt="virtual"><scope>AxiSymBiorth</scope><name>~AxiSymBiorth</name></member>
-      <member refid="class_biorth_1a83c4824d7003048794102f54152cfdbc" prot="public" virt="virtual"><scope>AxiSymBiorth</scope><name>~Biorth</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_axi_sym_model.xml b/doxyxml/class_axi_sym_model.xml
deleted file mode 100644
index 923a89f..0000000
--- a/doxyxml/class_axi_sym_model.xml
+++ /dev/null
@@ -1,1660 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_axi_sym_model" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>AxiSymModel</compoundname>
-    <basecompoundref refid="class_mass_model" prot="public" virt="non-virtual">MassModel</basecompoundref>
-    <basecompoundref prot="public" virt="non-virtual">std::enable_shared_from_this&lt; AxiSymModel &gt;</basecompoundref>
-    <derivedcompoundref refid="class_cyl_disk" prot="public" virt="non-virtual">CylDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_disk_with_halo" prot="public" virt="non-virtual">DiskWithHalo</derivedcompoundref>
-    <derivedcompoundref refid="class_embedded_disk_model" prot="public" virt="non-virtual">EmbeddedDiskModel</derivedcompoundref>
-    <derivedcompoundref refid="class_exponential_disk" prot="public" virt="non-virtual">ExponentialDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_generalized_polytrope" prot="public" virt="non-virtual">GeneralizedPolytrope</derivedcompoundref>
-    <derivedcompoundref refid="class_hernquist_sphere" prot="public" virt="non-virtual">HernquistSphere</derivedcompoundref>
-    <derivedcompoundref refid="class_hunter_disk" prot="public" virt="non-virtual">HunterDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_hunter_disk_x" prot="public" virt="non-virtual">HunterDiskX</derivedcompoundref>
-    <derivedcompoundref refid="class_isothermal_sphere" prot="public" virt="non-virtual">IsothermalSphere</derivedcompoundref>
-    <derivedcompoundref refid="class_kalnajs_disk" prot="public" virt="non-virtual">KalnajsDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_low_sing_isothermal_sphere" prot="public" virt="non-virtual">LowSingIsothermalSphere</derivedcompoundref>
-    <derivedcompoundref refid="class_mestel_disk" prot="public" virt="non-virtual">MestelDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_plummer_sphere" prot="public" virt="non-virtual">PlummerSphere</derivedcompoundref>
-    <derivedcompoundref refid="class_sing_isothermal_sphere" prot="public" virt="non-virtual">SingIsothermalSphere</derivedcompoundref>
-    <derivedcompoundref refid="class_spherical_model_multi" prot="public" virt="non-virtual">SphericalModelMulti</derivedcompoundref>
-    <derivedcompoundref refid="class_spherical_model_table" prot="public" virt="non-virtual">SphericalModelTable</derivedcompoundref>
-    <derivedcompoundref refid="class_toomre_disk" prot="public" virt="non-virtual">ToomreDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_zang_disk" prot="public" virt="non-virtual">ZangDisk</derivedcompoundref>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <innerclass refid="class_axi_sym_model_1_1_w_rgrid" prot="protected">AxiSymModel::WRgrid</innerclass>
-    <sectiondef kind="protected-type">
-      <memberdef kind="typedef" id="class_axi_sym_model_1a624c90f1d36963b7b023b9818a41b43b" prot="protected" static="no">
-        <type>vector&lt; <ref refid="class_axi_sym_model_1_1_w_rgrid" kindref="compound">WRgrid</ref> &gt;</type>
-        <definition>typedef vector&lt;WRgrid&gt; AxiSymModel::wrvector</definition>
-        <argsstring></argsstring>
-        <name>wrvector</name>
-        <qualifiedname>AxiSymModel::wrvector</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="146" column="18" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="146" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_axi_sym_model_1a3556ad7640450879dd0d3d922c2cf6b9" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double AxiSymModel::dEgrid</definition>
-        <argsstring></argsstring>
-        <name>dEgrid</name>
-        <qualifiedname>AxiSymModel::dEgrid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="135" column="30" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="135" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axi_sym_model_1a526eabe43c3685815c0fab271accbe32" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double AxiSymModel::dKgrid</definition>
-        <argsstring></argsstring>
-        <name>dKgrid</name>
-        <qualifiedname>AxiSymModel::dKgrid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="135" column="37" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="135" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axi_sym_model_1a86935282f15c2976cd9d5faef793d63e" prot="protected" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; AxiSymModel::Egrid</definition>
-        <argsstring></argsstring>
-        <name>Egrid</name>
-        <qualifiedname>AxiSymModel::Egrid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="136" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="136" bodyend="-1"/>
-      </memberdef>
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-        <type>double</type>
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-        <reimplementedby refid="class_plummer_sphere_1a046542e5c6831717f9b5bcd1cb850906">distf</reimplementedby>
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-        <reimplementedby refid="class_cyl_disk_1ae9ef54bc692ed877ea1a6521eca9cf2e">distf</reimplementedby>
-        <reimplementedby refid="class_disk_with_halo_1a47949ec45a68566a57d65c737dfbe6df">distf</reimplementedby>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="205" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axi_sym_model_1a5e4cb31e8463807b1b14b3858c5c03b2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>virtual Eigen::VectorXd AxiSymModel::gen_point</definition>
-        <argsstring>(double Emin, double Emax, double Kmin, double Kmax, int &amp;ierr)</argsstring>
-        <name>gen_point</name>
-        <qualifiedname>AxiSymModel::gen_point</qualifiedname>
-        <reimplementedby refid="class_spherical_model_multi_1a9f3e6273a43842ea067baedf7732264c">gen_point</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>Emin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Emax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Kmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Kmax</declname>
-        </param>
-        <param>
-          <type>int &amp;</type>
-          <declname>ierr</declname>
-        </param>
-        <briefdescription>
-<para>Generate a phase-space point at a particular energy and angular momentum. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="251" column="27" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="251" bodyend="260"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" compoundref="massmodel_8_h" startline="97" endline="97">MassModel::dof</references>
-        <references refid="class_axi_sym_model_1a98fb5e4481e2ee8ecc7a47db1ae33f44">gen_point_3d</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axi_sym_model_1a8ec2585dc6f33e2ebae4f8dd3d22fc5a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>virtual Eigen::VectorXd AxiSymModel::gen_point</definition>
-        <argsstring>(double r, int &amp;ierr)</argsstring>
-        <name>gen_point</name>
-        <qualifiedname>AxiSymModel::gen_point</qualifiedname>
-        <reimplementedby refid="class_spherical_model_multi_1a4e551c031311012093e09b099ecf84c0">gen_point</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int &amp;</type>
-          <declname>ierr</declname>
-        </param>
-        <briefdescription>
-<para>Generate a phase-space point at a particular radius. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="239" column="27" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="239" bodyend="248"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" compoundref="massmodel_8_h" startline="97" endline="97">MassModel::dof</references>
-        <references refid="class_axi_sym_model_1a65a0d8629fdcf8dcb1e3bcf17eee2fd0">gen_point_2d</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axi_sym_model_1a29297280d1fb4603b2138a7a2ede86f4" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>virtual Eigen::VectorXd AxiSymModel::gen_point</definition>
-        <argsstring>(int &amp;ierr)</argsstring>
-        <name>gen_point</name>
-        <qualifiedname>AxiSymModel::gen_point</qualifiedname>
-        <reimplementedby refid="class_spherical_model_multi_1a07ef73cc9896c942f12558184ef946d3">gen_point</reimplementedby>
-        <param>
-          <type>int &amp;</type>
-          <declname>ierr</declname>
-        </param>
-        <briefdescription>
-<para>Generate a phase-space point. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="215" column="27" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="215" bodyend="224"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" compoundref="massmodel_8_h" startline="97" endline="97">MassModel::dof</references>
-        <references refid="class_axi_sym_model_1a65a0d8629fdcf8dcb1e3bcf17eee2fd0">gen_point_2d</references>
-        <references refid="class_axi_sym_model_1a98fb5e4481e2ee8ecc7a47db1ae33f44">gen_point_3d</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axi_sym_model_1adcafd558768aeb72e0cc483f231a1be5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>virtual Eigen::VectorXd AxiSymModel::gen_point_jeans</definition>
-        <argsstring>(int &amp;ierr)</argsstring>
-        <name>gen_point_jeans</name>
-        <qualifiedname>AxiSymModel::gen_point_jeans</qualifiedname>
-        <param>
-          <type>int &amp;</type>
-          <declname>ierr</declname>
-        </param>
-        <briefdescription>
-<para>Generate a phase-space point using Jeans&apos; equations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="227" column="27" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="227" bodyend="236"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" compoundref="massmodel_8_h" startline="97" endline="97">MassModel::dof</references>
-        <references refid="class_axi_sym_model_1a13d7af1df29796004e2d14194d8d8c7a">gen_point_jeans_3d</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axi_sym_model_1a524ea3beb7a799ffa2c5f90afbcf0bd7" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void AxiSymModel::gen_velocity</definition>
-        <argsstring>(double *pos, double *vel, int &amp;ierr)</argsstring>
-        <name>gen_velocity</name>
-        <qualifiedname>AxiSymModel::gen_velocity</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>pos</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>vel</declname>
-        </param>
-        <param>
-          <type>int &amp;</type>
-          <declname>ierr</declname>
-        </param>
-        <briefdescription>
-<para>Generate a the velocity variate from a position. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="263" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double AxiSymModel::get_density</definition>
-        <argsstring>(const double x1, const double x2, const double x3) override</argsstring>
-        <name>get_density</name>
-        <qualifiedname>AxiSymModel::get_density</qualifiedname>
-        <reimplements refid="class_mass_model_1a5faf20e029b7a79d2cd7e159b7c81636">get_density</reimplements>
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-        <reimplementedby refid="class_disk_with_halo_1ab499a49471cc87ecb12638adce08a15d">get_density</reimplementedby>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The density at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="194" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="194" bodyend="195"/>
-        <references refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</references>
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-        <type>double</type>
-        <definition>virtual double AxiSymModel::get_density</definition>
-        <argsstring>(const double)=0</argsstring>
-        <name>get_density</name>
-        <qualifiedname>AxiSymModel::get_density</qualifiedname>
-        <reimplementedby refid="class_exponential_disk_1acdc1edb0d7993b793c1dd57d9bd3a189">get_density</reimplementedby>
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-        <reimplementedby refid="class_embedded_disk_model_1a3ffbd7a622f73cfe9b67ffae80cfed7f">get_density</reimplementedby>
-        <reimplementedby refid="class_spherical_model_table_1a33ef4146cea85ef88bb6ff81b1410384">get_density</reimplementedby>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="185" column="18"/>
-        <referencedby refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc" compoundref="massmodel_8_h" startline="194" endline="195">get_density</referencedby>
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-        <type>double</type>
-        <definition>virtual double AxiSymModel::get_dpot</definition>
-        <argsstring>(const double)=0</argsstring>
-        <name>get_dpot</name>
-        <qualifiedname>AxiSymModel::get_dpot</qualifiedname>
-        <reimplementedby refid="class_exponential_disk_1af4049b4d62c5b47622aedec3ca2fed48">get_dpot</reimplementedby>
-        <reimplementedby refid="class_hernquist_sphere_1a926ec2665ba371cb35b5f43df81c1d90">get_dpot</reimplementedby>
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-        <reimplementedby refid="class_hunter_disk_x_1a467fdd0a08dc1ed3ffba21f6122f2dbf">get_dpot</reimplementedby>
-        <reimplementedby refid="class_sing_isothermal_sphere_1a1b9b82602ad234333438ea63c5444df1">get_dpot</reimplementedby>
-        <reimplementedby refid="class_isothermal_sphere_1a1ea525b10190a8f6123ef4364eac8561">get_dpot</reimplementedby>
-        <reimplementedby refid="class_low_sing_isothermal_sphere_1ac05e510eecb71c632b823c60f7a2f247">get_dpot</reimplementedby>
-        <reimplementedby refid="class_kalnajs_disk_1aede267d36a3f29d96c109e14b40baf5e">get_dpot</reimplementedby>
-        <reimplementedby refid="class_spherical_model_multi_1aa4e9bded3e82e3b4627f675b6b9b5964">get_dpot</reimplementedby>
-        <reimplementedby refid="class_mestel_disk_1a2d99e916b5c7db8c3cf653de463d643b">get_dpot</reimplementedby>
-        <reimplementedby refid="class_plummer_sphere_1a2284b215f5c25868c28e6dee159d9791">get_dpot</reimplementedby>
-        <reimplementedby refid="class_toomre_disk_1a7bb3656f2d98532b4d5e21d6deafa29c">get_dpot</reimplementedby>
-        <reimplementedby refid="class_zang_disk_1acde671d69e89cd829f4bd824c22e2a0f">get_dpot</reimplementedby>
-        <reimplementedby refid="class_cyl_disk_1ad4ff5ae0adcc35a7e9326e87e48c43c2">get_dpot</reimplementedby>
-        <reimplementedby refid="class_disk_with_halo_1a298f24fcd27cf5f837c18e52eafdc106">get_dpot</reimplementedby>
-        <reimplementedby refid="class_generalized_polytrope_1aaa1f8ae202009ce7ae1431b172960b46">get_dpot</reimplementedby>
-        <reimplementedby refid="class_embedded_disk_model_1a2d94fa2b784f522685eac97b24814511">get_dpot</reimplementedby>
-        <reimplementedby refid="class_spherical_model_table_1a3a595da2880039eba8ceff3ec3f110b0">get_dpot</reimplementedby>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="187" column="18"/>
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-      <memberdef kind="function" id="class_axi_sym_model_1a77b9bb693457557d379167ca0ca2caae" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double AxiSymModel::get_dpot2</definition>
-        <argsstring>(const double)=0</argsstring>
-        <name>get_dpot2</name>
-        <qualifiedname>AxiSymModel::get_dpot2</qualifiedname>
-        <reimplementedby refid="class_exponential_disk_1a81c1a4ba41b67dc7742d5f62c8ac65cf">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_hernquist_sphere_1abb190a388e0df34ac058c739c8dde702">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_hunter_disk_1a25b4689e9ac2cdef2c021ee18e0bafdb">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_hunter_disk_x_1a848f4b3a021e57904669e5b7492957bd">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_sing_isothermal_sphere_1a210a5ddff4461cf1d3243a02a6478ed3">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_isothermal_sphere_1af871c1dc6091736c1138b04868dbc8e3">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_low_sing_isothermal_sphere_1a6a44dfbfa2ad5937b6cfe5a068b68fc8">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_kalnajs_disk_1ac247a5c2512d480d32dc9edce8e67dcc">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_spherical_model_multi_1a8566c412db568e823ce4ef3cafaa3125">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_mestel_disk_1a71dfc91bc5793d2d0d6d528a307d2243">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_plummer_sphere_1a603d8d644951e5868f76a0e4cdac8faf">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_toomre_disk_1a1236638ac1c70ce8035eeac2765e5570">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_zang_disk_1ad1bdf4b87f33317d47f642738fa58966">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_disk_with_halo_1a83af39a3f1f0eaaae16e9d6a54e57de3">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_generalized_polytrope_1ae5a4a781841c445d7945f01e4e5b6135">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_embedded_disk_model_1a6f1261707e304ed949152834f9d0546d">get_dpot2</reimplementedby>
-        <reimplementedby refid="class_spherical_model_table_1a6ef6735b075e4b78e421e90af9b82b79">get_dpot2</reimplementedby>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="188" column="18"/>
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-      <memberdef kind="function" id="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double AxiSymModel::get_mass</definition>
-        <argsstring>(const double x1, const double x2, const double x3) override</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>AxiSymModel::get_mass</qualifiedname>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>const double</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get the mass inside of position (x, y, z) (this is ambiguous in general and will depend on the model) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="191" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="191" bodyend="192"/>
-        <references refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465">get_mass</references>
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-        <type>double</type>
-        <definition>virtual double AxiSymModel::get_mass</definition>
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-        <name>get_mass</name>
-        <qualifiedname>AxiSymModel::get_mass</qualifiedname>
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-        <param>
-          <type>const double</type>
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-<para>Access the profile. </para>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>virtual double AxiSymModel::get_max_radius</definition>
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-        <name>get_max_radius</name>
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-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>virtual double AxiSymModel::get_min_radius</definition>
-        <argsstring>(void)=0</argsstring>
-        <name>get_min_radius</name>
-        <qualifiedname>AxiSymModel::get_min_radius</qualifiedname>
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-        <param>
-          <type>void</type>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>double AxiSymModel::get_pot</definition>
-        <argsstring>(const double x1, const double x2, const double x3) override</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>AxiSymModel::get_pot</qualifiedname>
-        <reimplements refid="class_mass_model_1ad41f6d36e5774e490c7d82ca12f49c78">get_pot</reimplements>
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-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The potential at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="197" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="197" bodyend="198"/>
-        <references refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba">get_pot</references>
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-        <type>double</type>
-        <definition>virtual double AxiSymModel::get_pot</definition>
-        <argsstring>(const double)=0</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>AxiSymModel::get_pot</qualifiedname>
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-        <param>
-          <type>const double</type>
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-        </detaileddescription>
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-        </inbodydescription>
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-        <type>void</type>
-        <definition>virtual void AxiSymModel::get_pot_dpot</definition>
-        <argsstring>(const double, double &amp;, double &amp;)=0</argsstring>
-        <name>get_pot_dpot</name>
-        <qualifiedname>AxiSymModel::get_pot_dpot</qualifiedname>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>double &amp;</type>
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-        <param>
-          <type>double &amp;</type>
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-        <type>void</type>
-        <definition>void AxiSymModel::set_Ecut</definition>
-        <argsstring>(double cut)</argsstring>
-        <name>set_Ecut</name>
-        <qualifiedname>AxiSymModel::set_Ecut</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>cut</declname>
-        </param>
-        <briefdescription>
-<para>Set cutoff on multimass realization grid. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="212" column="8" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="212" bodyend="212"/>
-        <references refid="class_axi_sym_model_1a85758608cec039affbc42c2ad3390056" compoundref="massmodel_8_h" startline="126">gen_ecut</references>
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-        <type>void</type>
-        <definition>void AxiSymModel::set_itmax</definition>
-        <argsstring>(int s)</argsstring>
-        <name>set_itmax</name>
-        <qualifiedname>AxiSymModel::set_itmax</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>s</declname>
-        </param>
-        <briefdescription>
-<para>Maximum number of iterations for obtaining a valid variate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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diff --git a/doxyxml/class_axi_sym_model_1_1_w_rgrid.xml b/doxyxml/class_axi_sym_model_1_1_w_rgrid.xml
deleted file mode 100644
index ab839ce..0000000
--- a/doxyxml/class_axi_sym_model_1_1_w_rgrid.xml
+++ /dev/null
@@ -1,46 +0,0 @@
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diff --git a/doxyxml/class_axisymmetric_basis.xml b/doxyxml/class_axisymmetric_basis.xml
deleted file mode 100644
index fb9bc7c..0000000
--- a/doxyxml/class_axisymmetric_basis.xml
+++ /dev/null
@@ -1,1474 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_axisymmetric_basis" kind="class" language="C++" prot="public">
-    <compoundname>AxisymmetricBasis</compoundname>
-    <basecompoundref refid="class_basis" prot="public" virt="non-virtual">Basis</basecompoundref>
-    <derivedcompoundref refid="class_polar_basis" prot="public" virt="non-virtual">PolarBasis</derivedcompoundref>
-    <derivedcompoundref refid="class_spherical_basis" prot="public" virt="non-virtual">SphericalBasis</derivedcompoundref>
-    <includes refid="_axisymmetric_basis_8_h" local="no">AxisymmetricBasis.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="enum" id="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6" prot="public" static="no" strong="no">
-        <type></type>
-        <name>TKType</name>
-        <qualifiedname>AxisymmetricBasis::TKType</qualifiedname>
-        <enumvalue id="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a355c2a93725cd932da5408330dec2a6b" prot="public">
-          <name>Hall</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-<para>Tapered signal-to-noise power defined by Hall <linebreak/>
- </para>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a27bdb8b3a4040b794e7418581fda2615" prot="public">
-          <name>VarianceCut</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-<para>Cut all coefficients below some S/N level <linebreak/>
- </para>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a1dbf0ed28469f49a393a25a7b67753c3" prot="public">
-          <name>CumulativeCut</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-<para>Cut coefficients below some cumulative fraction </para>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a7381bdf9e2231e55827cf72d86f7f415" prot="public">
-          <name>VarianceWeighted</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-<para>Weight coefficients be S/N for S/N&lt;1 <linebreak/>
- </para>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6a85300903a059bd6e3a193bd92112a16f" prot="public">
-          <name>None</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-<para>Compute the S/N but do not modify coefficients <linebreak/>
- </para>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Enum listing the possible selection algorithms for coefficient selection </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="166" column="3" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="166" bodyend="172"/>
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-    <sectiondef kind="protected-type">
-      <memberdef kind="typedef" id="class_axisymmetric_basis_1a4f7fd256528b06fa3124aa070e558c9a" prot="protected" static="no">
-        <type>std::shared_ptr&lt; Eigen::MatrixXd &gt;</type>
-        <definition>typedef std::shared_ptr&lt;Eigen::MatrixXd&gt; AxisymmetricBasis::MatrixP</definition>
-        <argsstring></argsstring>
-        <name>MatrixP</name>
-        <qualifiedname>AxisymmetricBasis::MatrixP</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="93" column="27" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="93" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_axisymmetric_basis_1a90258bc4c31858abd74719a452f7f807" prot="protected" static="no">
-        <type>std::shared_ptr&lt; Eigen::VectorXd &gt;</type>
-        <definition>typedef std::shared_ptr&lt;Eigen::VectorXd&gt; AxisymmetricBasis::VectorP</definition>
-        <argsstring></argsstring>
-        <name>VectorP</name>
-        <qualifiedname>AxisymmetricBasis::VectorP</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Expansion coefficients (summed over all nodes)</para>
-<para>The vector entries store coefficients for a multistep expansion. Move pointers rather than objects for efficiency. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>unsigned</type>
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-        <definition>std::vector&lt;VectorP&gt; AxisymmetricBasis::expcoef</definition>
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-        <definition>std::vector&lt;std::vector&lt;VectorP&gt; &gt; AxisymmetricBasis::expcoefL</definition>
-        <argsstring></argsstring>
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-        <qualifiedname>AxisymmetricBasis::expcoefL</qualifiedname>
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-        </briefdescription>
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-        <definition>std::vector&lt;std::vector&lt;VectorP&gt; &gt; AxisymmetricBasis::expcoefN</definition>
-        <argsstring></argsstring>
-        <name>expcoefN</name>
-        <qualifiedname>AxisymmetricBasis::expcoefN</qualifiedname>
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-<para>Interpolation arrays. </para>
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-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="114" column="15" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="114" bodyend="-1"/>
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-        <name>expcoefP</name>
-        <qualifiedname>AxisymmetricBasis::expcoefP</qualifiedname>
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-        <definition>std::vector&lt;std::vector&lt;VectorP&gt; &gt; AxisymmetricBasis::expcoefT</definition>
-        <argsstring></argsstring>
-        <name>expcoefT</name>
-        <qualifiedname>AxisymmetricBasis::expcoefT</qualifiedname>
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-<para>Covariance arrays. </para>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="120" column="15" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="120" bodyend="-1"/>
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-<para>Hall smoothing exponent (default: 1.0) </para>
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-        <briefdescription>
-<para>Maximum angular harmonic. </para>
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-        <referencedby refid="class_axisymmetric_basis_1a392660898c9be95471072adb3f0faa25" compoundref="_axisymmetric_basis_8_h" startline="198" endline="198">getLmax</referencedby>
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-<para>Mass and counts for subsample covariance. </para>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd AxisymmetricBasis::normM</definition>
-        <argsstring></argsstring>
-        <name>normM</name>
-        <qualifiedname>AxisymmetricBasis::normM</qualifiedname>
-        <briefdescription>
-<para>Normalization for covariance matrix based on the biorthogonal basis norm. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="135" column="19" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="135" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axisymmetric_basis_1afa81d9394890b9ebc0a7989651b021d9" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int AxisymmetricBasis::npca</definition>
-        <argsstring></argsstring>
-        <name>npca</name>
-        <qualifiedname>AxisymmetricBasis::npca</qualifiedname>
-        <briefdescription>
-<para>Frequency of PCA computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="73" column="7" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="73" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axisymmetric_basis_1a68be4e14ebd23388b75d8df12af76667" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int AxisymmetricBasis::npca0</definition>
-        <argsstring></argsstring>
-        <name>npca0</name>
-        <qualifiedname>AxisymmetricBasis::npca0</qualifiedname>
-        <briefdescription>
-<para>First step for PCA computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="76" column="7" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="76" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axisymmetric_basis_1aea08169a329b6608c42fdeeb1db91183" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool AxisymmetricBasis::pcadiag</definition>
-        <argsstring></argsstring>
-        <name>pcadiag</name>
-        <qualifiedname>AxisymmetricBasis::pcadiag</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_output" kindref="compound">Output</ref> PCA diagnostics. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="61" column="8" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="61" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axisymmetric_basis_1af2a1f4efbdc887b29a6d49b770c1f060" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool AxisymmetricBasis::pcaeof</definition>
-        <argsstring></argsstring>
-        <name>pcaeof</name>
-        <qualifiedname>AxisymmetricBasis::pcaeof</qualifiedname>
-        <briefdescription>
-<para>Compute eof decomposition. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="67" column="8" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="67" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axisymmetric_basis_1a8da7266925e30ee0056cf97e84d4809e" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool AxisymmetricBasis::pcavar</definition>
-        <argsstring></argsstring>
-        <name>pcavar</name>
-        <qualifiedname>AxisymmetricBasis::pcavar</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Use principal component bootstrap analysis of variance to select coefficients </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="58" column="8" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="58" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axisymmetric_basis_1ad53aa251aa38d7645a4d3eece99dc9d5" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool AxisymmetricBasis::pcavtk</definition>
-        <argsstring></argsstring>
-        <name>pcavtk</name>
-        <qualifiedname>AxisymmetricBasis::pcavtk</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_output" kindref="compound">Output</ref> PCA diagnostics in vtk format. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="64" column="8" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="64" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axisymmetric_basis_1a9e5bccb2a796e19083511f4e637cffda" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned AxisymmetricBasis::sampT</definition>
-        <argsstring></argsstring>
-        <name>sampT</name>
-        <qualifiedname>AxisymmetricBasis::sampT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="127" column="37" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="127" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1ac4fce6a4930030f49b46844753ce3052" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double AxisymmetricBasis::snr</definition>
-        <argsstring></argsstring>
-        <name>snr</name>
-        <qualifiedname>AxisymmetricBasis::snr</qualifiedname>
-        <briefdescription>
-<para>Signal-to-noise scaling parameter (default: 1.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="82" column="10" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="82" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_axisymmetric_basis_1a2dd973d8ace9db32c65938425d159af9" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd AxisymmetricBasis::sqnorm</definition>
-        <argsstring></argsstring>
-        <name>sqnorm</name>
-        <qualifiedname>AxisymmetricBasis::sqnorm</qualifiedname>
-        <briefdescription>
-<para>Sqr root of the normalization. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="138" column="19" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="138" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a592dd952d0301e3c55da82f78eb3cfe8" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool AxisymmetricBasis::subsamp</definition>
-        <argsstring></argsstring>
-        <name>subsamp</name>
-        <qualifiedname>AxisymmetricBasis::subsamp</qualifiedname>
-        <briefdescription>
-<para>Partitioned variance computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="157" column="8" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="157" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a8acdd32795c612cdcefee5da62cc5b3a" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_axisymmetric_basis_1a4f7fd256528b06fa3124aa070e558c9a" kindref="member">MatrixP</ref> &gt;</type>
-        <definition>std::vector&lt;MatrixP&gt; AxisymmetricBasis::tvar</definition>
-        <argsstring></argsstring>
-        <name>tvar</name>
-        <qualifiedname>AxisymmetricBasis::tvar</qualifiedname>
-        <briefdescription>
-<para>Test for eof trim. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="131" column="28" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="131" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1ab0d1d51da0dc7f33cf3091bab41866d1" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned AxisymmetricBasis::vtkfreq</definition>
-        <argsstring></argsstring>
-        <name>vtkfreq</name>
-        <qualifiedname>AxisymmetricBasis::vtkfreq</qualifiedname>
-        <briefdescription>
-<para>VTK diagnostic frequency. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="70" column="12" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="70" bodyend="-1"/>
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-    <sectiondef kind="protected-static-attrib">
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-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; AxisymmetricBasis::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>AxisymmetricBasis::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="160" column="25" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="160" bodyend="-1"/>
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-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_axisymmetric_basis_1aa4fc18ccf44bdf56ac60b7caa68b1cfc" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; AxisymmetricBasis::b_Hall</definition>
-        <argsstring></argsstring>
-        <name>b_Hall</name>
-        <qualifiedname>AxisymmetricBasis::b_Hall</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="214" column="15" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="214" bodyend="-1"/>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd AxisymmetricBasis::covar</definition>
-        <argsstring></argsstring>
-        <name>covar</name>
-        <qualifiedname>AxisymmetricBasis::covar</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="220" column="19" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="220" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a739cec07895fdd02850006d6a52639a8" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd AxisymmetricBasis::cuml</definition>
-        <argsstring></argsstring>
-        <name>cuml</name>
-        <qualifiedname>AxisymmetricBasis::cuml</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="217" column="19" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="217" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a45362e008f1389402494647b75931e1e" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd AxisymmetricBasis::eval</definition>
-        <argsstring></argsstring>
-        <name>eval</name>
-        <qualifiedname>AxisymmetricBasis::eval</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="216" column="19" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="216" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1ae30dc4a6d54a9b90dbe31e2b03821382" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; AxisymmetricBasis::evec</definition>
-        <argsstring></argsstring>
-        <name>evec</name>
-        <qualifiedname>AxisymmetricBasis::evec</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="218" column="15" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="218" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1ae6dd8f205982c2e3ef87f6f467976018" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double AxisymmetricBasis::fac02</definition>
-        <argsstring></argsstring>
-        <name>fac02</name>
-        <qualifiedname>AxisymmetricBasis::fac02</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="208" column="10" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="208" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1abe6cac911f0415ee15378c104bd3fd16" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd AxisymmetricBasis::inv</definition>
-        <argsstring></argsstring>
-        <name>inv</name>
-        <qualifiedname>AxisymmetricBasis::inv</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="215" column="19" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="215" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a77c3332bf7286f04c94af7d068c7b2c4" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int AxisymmetricBasis::L0</definition>
-        <argsstring></argsstring>
-        <name>L0</name>
-        <qualifiedname>AxisymmetricBasis::L0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="207" column="15" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="207" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a570f3d24187073d3354933ace93a6bd6" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int AxisymmetricBasis::Ldim</definition>
-        <argsstring></argsstring>
-        <name>Ldim</name>
-        <qualifiedname>AxisymmetricBasis::Ldim</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="207" column="10" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="207" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a5116daa842c0f604c2a312db8e0ce97e" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; AxisymmetricBasis::s_Hall</definition>
-        <argsstring></argsstring>
-        <name>s_Hall</name>
-        <qualifiedname>AxisymmetricBasis::s_Hall</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="213" column="15" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="213" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a52873b88250c954ccca613fab178c5ee" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd AxisymmetricBasis::smth</definition>
-        <argsstring></argsstring>
-        <name>smth</name>
-        <qualifiedname>AxisymmetricBasis::smth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="211" column="19" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="211" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a196db3f26a946c2dcbaabcbe31883b4a" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; AxisymmetricBasis::Tevec</definition>
-        <argsstring></argsstring>
-        <name>Tevec</name>
-        <qualifiedname>AxisymmetricBasis::Tevec</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="219" column="15" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="219" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a3e85225ea1c3c408fe2bcf23ad09b555" prot="private" static="no" mutable="no">
-        <type><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6" kindref="member">TKType</ref></type>
-        <definition>TKType AxisymmetricBasis::tk_type</definition>
-        <argsstring></argsstring>
-        <name>tk_type</name>
-        <qualifiedname>AxisymmetricBasis::tk_type</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="209" column="10" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="209" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a3a98442a6149253a6881c33cf6792e38" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double AxisymmetricBasis::tkcum</definition>
-        <argsstring></argsstring>
-        <name>tkcum</name>
-        <qualifiedname>AxisymmetricBasis::tkcum</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="208" column="25" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="208" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1ad4dabce5bd04809a4644cb36705312f9" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double AxisymmetricBasis::tksmooth</definition>
-        <argsstring></argsstring>
-        <name>tksmooth</name>
-        <qualifiedname>AxisymmetricBasis::tksmooth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="208" column="16" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="208" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_axisymmetric_basis_1a3708ccfcde62cc3e88dbde5994d08f26" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; AxisymmetricBasis::weight</definition>
-        <argsstring></argsstring>
-        <name>weight</name>
-        <qualifiedname>AxisymmetricBasis::weight</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="212" column="15" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="212" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-func">
-      <memberdef kind="function" id="class_axisymmetric_basis_1a0ba9093da208645ba67931e04a61f4c7" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void AxisymmetricBasis::parallel_distribute_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>parallel_distribute_coefficients</name>
-        <qualifiedname>AxisymmetricBasis::parallel_distribute_coefficients</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>MPI routines to distribution the expansion coefficients (<computeroutput>expcoef</computeroutput>) from all nodes. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="145" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a1aba7be747336c8e6a67613a3109e285" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void AxisymmetricBasis::parallel_gather_coef2</definition>
-        <argsstring>(void)</argsstring>
-        <name>parallel_gather_coef2</name>
-        <qualifiedname>AxisymmetricBasis::parallel_gather_coef2</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>MPI routines to sum the expansion coefficients variance moments (<computeroutput>cc</computeroutput>) from all nodes. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="154" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a01ab8064885a073b48ad562790b89f86" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void AxisymmetricBasis::parallel_gather_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>parallel_gather_coefficients</name>
-        <qualifiedname>AxisymmetricBasis::parallel_gather_coefficients</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>MPI routines to sum the expansion coefficients (<computeroutput>expcoef</computeroutput>) from all nodes. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="150" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a8298f44c8cc6e6401b471c4a50c52662" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void AxisymmetricBasis::swap_coefs</definition>
-        <argsstring>(std::vector&lt; VectorP &gt; &amp;from, std::vector&lt; VectorP &gt; &amp;to)</argsstring>
-        <name>swap_coefs</name>
-        <qualifiedname>AxisymmetricBasis::swap_coefs</qualifiedname>
-        <param>
-          <type>std::vector&lt; <ref refid="class_axisymmetric_basis_1a90258bc4c31858abd74719a452f7f807" kindref="member">VectorP</ref> &gt; &amp;</type>
-          <declname>from</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; <ref refid="class_axisymmetric_basis_1a90258bc4c31858abd74719a452f7f807" kindref="member">VectorP</ref> &gt; &amp;</type>
-          <declname>to</declname>
-        </param>
-        <briefdescription>
-<para><ref refid="class_swap" kindref="compound">Swap</ref> coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="98" column="8" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="98" bodyend="110"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_axisymmetric_basis_1ab965e325410d79d567903f51dd2c6dd0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>AxisymmetricBasis::AxisymmetricBasis</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;line)</argsstring>
-        <name>AxisymmetricBasis</name>
-        <qualifiedname>AxisymmetricBasis::AxisymmetricBasis</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>line</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="175" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a81196ff99fb4254c4e37866ca3d2c7de" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="class_axisymmetric_basis_1a90258bc4c31858abd74719a452f7f807" kindref="member">VectorP</ref></type>
-        <definition>VectorP AxisymmetricBasis::getCoefs</definition>
-        <argsstring>(int l) const</argsstring>
-        <name>getCoefs</name>
-        <qualifiedname>AxisymmetricBasis::getCoefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <briefdescription>
-<para>Access coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="194" column="11" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="194" bodyend="194"/>
-        <references refid="class_axisymmetric_basis_1afae69589bd4f7341ab42b8c48c22b707" compoundref="_axisymmetric_basis_8_h" startline="95">expcoef</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a392660898c9be95471072adb3f0faa25" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int AxisymmetricBasis::getLmax</definition>
-        <argsstring>()</argsstring>
-        <name>getLmax</name>
-        <qualifiedname>AxisymmetricBasis::getLmax</qualifiedname>
-        <briefdescription>
-<para>Get angular order. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="198" column="7" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="198" bodyend="198"/>
-        <references refid="class_axisymmetric_basis_1abed8db010c45ad27e769043c68ab3101" compoundref="_axisymmetric_basis_8_h" startline="51">Lmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1ab09be7b0782949e27379ea930eb10171" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int AxisymmetricBasis::getMmax</definition>
-        <argsstring>()</argsstring>
-        <name>getMmax</name>
-        <qualifiedname>AxisymmetricBasis::getMmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="199" column="7" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="199" bodyend="199"/>
-        <references refid="class_axisymmetric_basis_1a2307130cf92a81e6cfb6f69fb2279585" compoundref="_axisymmetric_basis_8_h" startline="51">Mmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a3026462dfa88e923d7673f3d56dc4de4" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int AxisymmetricBasis::getNmax</definition>
-        <argsstring>()</argsstring>
-        <name>getNmax</name>
-        <qualifiedname>AxisymmetricBasis::getNmax</qualifiedname>
-        <briefdescription>
-<para>Get radial order. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="203" column="7" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="203" bodyend="203"/>
-        <references refid="class_axisymmetric_basis_1acee029d0e3afc656f5fb5d8f063a97d9" compoundref="_axisymmetric_basis_8_h" startline="54">nmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a93d8a3c0e104139477fec734a6baf8e6" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void AxisymmetricBasis::multistep_reset</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_reset</name>
-        <qualifiedname>AxisymmetricBasis::multistep_reset</qualifiedname>
-        <reimplements refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f">multistep_reset</reimplements>
-        <reimplementedby refid="class_polar_basis_1a176f79dfddda7dae31a595259abf797b">multistep_reset</reimplementedby>
-        <reimplementedby refid="class_spherical_basis_1aef978544ce5d90a116759fd3a87a8634">multistep_reset</reimplementedby>
-        <briefdescription>
-<para>Reset used particle counter. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="188" column="16" bodyfile="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" bodystart="188" bodyend="188"/>
-        <references refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" compoundref="_pot_accel_8_h" startline="65">PotAccel::used</references>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a408a19fff1093c88f6a9bcf9ad2601d4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void AxisymmetricBasis::pca_hall</definition>
-        <argsstring>(bool compute)</argsstring>
-        <name>pca_hall</name>
-        <qualifiedname>AxisymmetricBasis::pca_hall</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>compute</declname>
-        </param>
-        <briefdescription>
-<para>Compute component noise suppression using PCA analysis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="182" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1ae0353b5d1b82b19517ede95a862d7484" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void AxisymmetricBasis::pca_hall_2d</definition>
-        <argsstring>(bool compute)</argsstring>
-        <name>pca_hall_2d</name>
-        <qualifiedname>AxisymmetricBasis::pca_hall_2d</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>compute</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="183" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1ab971c10417b2e844c9251d6a667103d4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void AxisymmetricBasis::pca_hall_3d</definition>
-        <argsstring>(bool compute)</argsstring>
-        <name>pca_hall_3d</name>
-        <qualifiedname>AxisymmetricBasis::pca_hall_3d</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>compute</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="184" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a6af1bcb2359adc5091625d457a953efa" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type><ref refid="class_axisymmetric_basis_1a5665efe4d9ba08fd8e173a7aa6cf77b6" kindref="member">TKType</ref></type>
-        <definition>TKType AxisymmetricBasis::setTK</definition>
-        <argsstring>(const std::string &amp;tk)</argsstring>
-        <name>setTK</name>
-        <qualifiedname>AxisymmetricBasis::setTK</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>tk</declname>
-        </param>
-        <briefdescription>
-<para>Set tk_type from string. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="191" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_axisymmetric_basis_1a98dbe87cedd6dc28d03bba5aba133dd4" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual AxisymmetricBasis::~AxisymmetricBasis</definition>
-        <argsstring>()</argsstring>
-        <name>~AxisymmetricBasis</name>
-        <qualifiedname>AxisymmetricBasis::~AxisymmetricBasis</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/AxisymmetricBasis.H" line="178" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Defines a basis-based potential and acceleration class. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>Configurable parameters are:</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>Lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum spherical harmonic order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum cylindrical harmonic order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dof</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the dimensionality of the basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the frequency for pca analyses</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps to skip before the first pca analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavar</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean turns on pca analyses</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcaeof</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean turns on emperical function recomputation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcadiag</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean turns on diagnostic pca output</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean prints out visualizable representations of pca info</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hexp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the Hall smoothing exponent</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>samplesz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of subsamples for pca variance analysis (default: 1). Value 0 means use sqrt number of particles</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>vtkfreq</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the frequency for printing pca variance analysis info</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tksmooth</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the S/N for Hall truncation for VarianceCut method</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tkcum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the cumulative fraction eigenvalue power for truncation for CmululativeCut method</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tk_type</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the smoothing type, one of: Hall, VarianceCut, CumulativeCut, VarianceWeighted</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>subsamp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true sets partition variance computation (default: false) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Bessel</label>
-        <link refid="class_bessel"/>
-        <childnode refid="7" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>CBDisk</label>
-        <link refid="class_c_b_disk"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>FlatDisk</label>
-        <link refid="class_flat_disk"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PolarBasis</label>
-        <link refid="class_polar_basis"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="9">
-        <label>Sphere</label>
-        <link refid="class_sphere"/>
-        <childnode refid="7" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>SphericalBasis</label>
-        <link refid="class_spherical_basis"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>t</edgelabel>
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diff --git a/doxyxml/class_b_s_disk.xml b/doxyxml/class_b_s_disk.xml
deleted file mode 100644
index d859486..0000000
--- a/doxyxml/class_b_s_disk.xml
+++ /dev/null
@@ -1,621 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_b_s_disk" kind="class" language="C++" prot="public">
-    <compoundname>BSDisk</compoundname>
-    <basecompoundref refid="class_axi_sym_biorth" prot="public" virt="non-virtual">AxiSymBiorth</basecompoundref>
-    <includes refid="biorth2d_8_h" local="no">biorth2d.H</includes>
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-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
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-        <qualifiedname>BSDisk::a</qualifiedname>
-        <briefdescription>
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-        <qualifiedname>BSDisk::mmax</qualifiedname>
-        <briefdescription>
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-        <qualifiedname>BSDisk::nmax</qualifiedname>
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-        <qualifiedname>BSDisk::numz</qualifiedname>
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-        <type>Eigen::VectorXd</type>
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diff --git a/doxyxml/class_b_s_sphere.xml b/doxyxml/class_b_s_sphere.xml
deleted file mode 100644
index 67b8e9f..0000000
--- a/doxyxml/class_b_s_sphere.xml
+++ /dev/null
@@ -1,628 +0,0 @@
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-        <label>AxiSymBiorth</label>
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-        </childnode>
-      </node>
-      <node id="1">
-        <label>BSSphere</label>
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-      <member refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" prot="public" virt="non-virtual"><scope>BSSphere</scope><name>BiorthID</name></member>
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diff --git a/doxyxml/class_b_w_data.xml b/doxyxml/class_b_w_data.xml
deleted file mode 100644
index 5d4c179..0000000
--- a/doxyxml/class_b_w_data.xml
+++ /dev/null
@@ -1,207 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_b_w_data" kind="class" language="C++" prot="public">
-    <compoundname>BWData</compoundname>
-    <includes refid="_barrier_wrapper_8_h" local="no">BarrierWrapper.H</includes>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_b_w_data_1a5639d584c1f974831723d5e6126b1845" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int BWData::dt1</definition>
-        <argsstring></argsstring>
-        <name>dt1</name>
-        <qualifiedname>BWData::dt1</qualifiedname>
-        <briefdescription>
-<para>Number of seconds before first alarm. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="85" column="14" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="85" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_b_w_data_1a02e9ed51c8f35b62f99b2bc8a33e2cf6" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int BWData::dt2</definition>
-        <argsstring></argsstring>
-        <name>dt2</name>
-        <qualifiedname>BWData::dt2</qualifiedname>
-        <briefdescription>
-<para>Number of seconds before all subsequent alarms. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="88" column="14" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="88" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_b_w_data_1a4675367000a64ca76df032e289646686" prot="public" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned BWData::count</definition>
-        <argsstring></argsstring>
-        <name>count</name>
-        <qualifiedname>BWData::count</qualifiedname>
-        <briefdescription>
-<para>Number of entries registered. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="102" column="12" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="102" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_b_w_data_1a4c5751ae28df283fd7d89ec6cd122df7" prot="public" static="no" mutable="no">
-        <type>time_t</type>
-        <definition>time_t BWData::expire</definition>
-        <argsstring></argsstring>
-        <name>expire</name>
-        <qualifiedname>BWData::expire</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="92" column="16" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="92" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_b_w_data_1a4de1e9aea8379ae7cd9795a23c806a70" prot="public" static="no" mutable="no">
-        <type>time_t</type>
-        <definition>time_t BWData::first</definition>
-        <argsstring></argsstring>
-        <name>first</name>
-        <qualifiedname>BWData::first</qualifiedname>
-        <briefdescription>
-<para>Times: initial and next expiration. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="92" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="92" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_b_w_data_1a6d1c06f8df7a13f9533f7f0e0c21bd14" prot="public" static="no" mutable="no">
-        <type>std::list&lt; <ref refid="_barrier_wrapper_8_h_1a389903bdb1259585e65a834df5ef9dfc" kindref="member">InfoPtr</ref> &gt;</type>
-        <definition>std::list&lt;InfoPtr&gt; BWData::info</definition>
-        <argsstring></argsstring>
-        <name>info</name>
-        <qualifiedname>BWData::info</qualifiedname>
-        <briefdescription>
-<para>Cache <ref refid="class_info" kindref="compound">Info</ref> shared pointers; storage reclaimed on destruction. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="105" column="13" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="105" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_b_w_data_1a1fa44f386c8eb0288e45dc619b39d09d" prot="public" static="no" mutable="no">
-        <type>std::vector&lt; bool &gt;</type>
-        <definition>std::vector&lt;bool&gt; BWData::nd</definition>
-        <argsstring></argsstring>
-        <name>nd</name>
-        <qualifiedname>BWData::nd</qualifiedname>
-        <briefdescription>
-<para>Array of received entries. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="96" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="96" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_b_w_data_1a3627f9db7360d51e67e687b7d10f2f55" prot="public" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned BWData::nexpiry</definition>
-        <argsstring></argsstring>
-        <name>nexpiry</name>
-        <qualifiedname>BWData::nexpiry</qualifiedname>
-        <briefdescription>
-<para>Number of alarm expirations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="99" column="12" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="99" bodyend="-1"/>
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-    </sectiondef>
-    <sectiondef kind="public-func">
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-        <type>void</type>
-        <definition>void BWData::Add</definition>
-        <argsstring>(InfoPtr &amp;p)</argsstring>
-        <name>Add</name>
-        <qualifiedname>BWData::Add</qualifiedname>
-        <param>
-          <type><ref refid="_barrier_wrapper_8_h_1a389903bdb1259585e65a834df5ef9dfc" kindref="member">InfoPtr</ref> &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Register node in existing entry. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="111" column="8"/>
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-      <memberdef kind="function" id="class_b_w_data_1a1b6cb9dd1ad85f70641ce6b44f932c05" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>BWData::BWData</definition>
-        <argsstring>(InfoPtr &amp;p, int commsize)</argsstring>
-        <name>BWData</name>
-        <qualifiedname>BWData::BWData</qualifiedname>
-        <param>
-          <type><ref refid="_barrier_wrapper_8_h_1a389903bdb1259585e65a834df5ef9dfc" kindref="member">InfoPtr</ref> &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>commsize</declname>
-        </param>
-        <briefdescription>
-<para>Full constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="108" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_b_w_data_1a54dc7e71b841e5e48628b72fa60475fe" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>int</type>
-        <definition>int BWData::Owner</definition>
-        <argsstring>()</argsstring>
-        <name>Owner</name>
-        <qualifiedname>BWData::Owner</qualifiedname>
-        <briefdescription>
-<para>Return the valid node with the lowest rank. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="114" column="7"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="81" column="1" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="82" bodyend="115"/>
-    <listofallmembers>
-      <member refid="class_b_w_data_1a6a719e9d4692633b72b918466e8cfc22" prot="public" virt="non-virtual"><scope>BWData</scope><name>Add</name></member>
-      <member refid="class_b_w_data_1a1b6cb9dd1ad85f70641ce6b44f932c05" prot="public" virt="non-virtual"><scope>BWData</scope><name>BWData</name></member>
-      <member refid="class_b_w_data_1a4675367000a64ca76df032e289646686" prot="public" virt="non-virtual"><scope>BWData</scope><name>count</name></member>
-      <member refid="class_b_w_data_1a5639d584c1f974831723d5e6126b1845" prot="public" virt="non-virtual"><scope>BWData</scope><name>dt1</name></member>
-      <member refid="class_b_w_data_1a02e9ed51c8f35b62f99b2bc8a33e2cf6" prot="public" virt="non-virtual"><scope>BWData</scope><name>dt2</name></member>
-      <member refid="class_b_w_data_1a4c5751ae28df283fd7d89ec6cd122df7" prot="public" virt="non-virtual"><scope>BWData</scope><name>expire</name></member>
-      <member refid="class_b_w_data_1a4de1e9aea8379ae7cd9795a23c806a70" prot="public" virt="non-virtual"><scope>BWData</scope><name>first</name></member>
-      <member refid="class_b_w_data_1a6d1c06f8df7a13f9533f7f0e0c21bd14" prot="public" virt="non-virtual"><scope>BWData</scope><name>info</name></member>
-      <member refid="class_b_w_data_1a1fa44f386c8eb0288e45dc619b39d09d" prot="public" virt="non-virtual"><scope>BWData</scope><name>nd</name></member>
-      <member refid="class_b_w_data_1a3627f9db7360d51e67e687b7d10f2f55" prot="public" virt="non-virtual"><scope>BWData</scope><name>nexpiry</name></member>
-      <member refid="class_b_w_data_1a54dc7e71b841e5e48628b72fa60475fe" prot="public" virt="non-virtual"><scope>BWData</scope><name>Owner</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_bad_index_exception.xml b/doxyxml/class_bad_index_exception.xml
deleted file mode 100644
index cf01a97..0000000
--- a/doxyxml/class_bad_index_exception.xml
+++ /dev/null
@@ -1,112 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_bad_index_exception" kind="class" language="C++" prot="public">
-    <compoundname>BadIndexException</compoundname>
-    <basecompoundref refid="class_e_x_p_exception" prot="public" virt="non-virtual">EXPException</basecompoundref>
-    <includes refid="_e_x_p_exception_8_h" local="no">EXPException.H</includes>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_bad_index_exception_1ade06db40b165a1977c58926df9718799" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>BadIndexException::BadIndexException</definition>
-        <argsstring>(int index, int num, const std::string sourcefilename, int sourcelinenumber, int errorcode=-1, bool deadlock=true)</argsstring>
-        <name>BadIndexException</name>
-        <qualifiedname>BadIndexException::BadIndexException</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>index</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>num</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>sourcefilename</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>sourcelinenumber</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>errorcode</declname>
-          <defval>-1</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>deadlock</declname>
-          <defval>true</defval>
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-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPException.H" line="171" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EXPException.H" bodystart="171" bodyend="182"/>
-        <references refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" compoundref="_e_x_p_exception_8_h" startline="95">EXPException::errormessage</references>
-        <references refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" compoundref="_e_x_p_exception_8_h" startline="92">EXPException::exceptionname</references>
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-</doxygen>
diff --git a/doxyxml/class_barrier_wrapper.xml b/doxyxml/class_barrier_wrapper.xml
deleted file mode 100644
index ce45576..0000000
--- a/doxyxml/class_barrier_wrapper.xml
+++ /dev/null
@@ -1,747 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_barrier_wrapper" kind="class" language="C++" prot="public">
-    <compoundname>BarrierWrapper</compoundname>
-    <includes refid="_barrier_wrapper_8_h" local="no">BarrierWrapper.H</includes>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_barrier_wrapper_1a39928dc8d3ef7bc5aa6378fc6e28aa24" prot="private" static="no">
-        <type>std::pair&lt; <ref refid="_barrier_wrapper_8_h_1ae26886b3fffa4f2f48b62705e6f3af3c" kindref="member">CharPtr</ref>, <ref refid="_barrier_wrapper_8_h_1a6ec85faa38de1a08236705734b4e2b26" kindref="member">ReqPtr</ref> &gt;</type>
-        <definition>typedef std::pair&lt;CharPtr, ReqPtr&gt; BarrierWrapper::RecvElem</definition>
-        <argsstring></argsstring>
-        <name>RecvElem</name>
-        <qualifiedname>BarrierWrapper::RecvElem</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="126" column="21" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="126" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="friend">
-      <memberdef kind="friend" id="class_barrier_wrapper_1a4838ff865b8d8625c61d208a420f8212" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>class</type>
-        <definition>friend class Info</definition>
-        <argsstring></argsstring>
-        <name>Info</name>
-        <qualifiedname>BarrierWrapper::Info</qualifiedname>
-        <param>
-          <type><ref refid="class_info" kindref="compound">Info</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="122" column="16" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="122" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_barrier_wrapper_1ae738138237618529147077d778dc9e55" prot="private" static="no" mutable="no">
-        <type>char *</type>
-        <definition>char* BarrierWrapper::buffer</definition>
-        <argsstring></argsstring>
-        <name>buffer</name>
-        <qualifiedname>BarrierWrapper::buffer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="131" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="131" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_barrier_wrapper_1a3acf68552460aec4bec9be9e521db98a" prot="private" static="no" mutable="no">
-        <type>char *</type>
-        <definition>char * BarrierWrapper::bufferT</definition>
-        <argsstring></argsstring>
-        <name>bufferT</name>
-        <qualifiedname>BarrierWrapper::bufferT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="131" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="131" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_barrier_wrapper_1aec4570a9b5a6579178f91c88d54b3d32" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool BarrierWrapper::check_label</definition>
-        <argsstring></argsstring>
-        <name>check_label</name>
-        <qualifiedname>BarrierWrapper::check_label</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="133" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="133" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_barrier_wrapper_1ab99ca69ccd7d7919c0348c78a0ec7712" prot="private" static="no" mutable="no">
-        <type>MPI_Comm</type>
-        <definition>MPI_Comm BarrierWrapper::comm</definition>
-        <argsstring></argsstring>
-        <name>comm</name>
-        <qualifiedname>BarrierWrapper::comm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="134" column="12" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="134" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_barrier_wrapper_1ad294be7c07634a25ec8938c62f996bad" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BarrierWrapper::commsize</definition>
-        <argsstring></argsstring>
-        <name>commsize</name>
-        <qualifiedname>BarrierWrapper::commsize</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="132" column="7" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="132" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_barrier_wrapper_1a8274f2be4307090574f2cc82cbefd383" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BarrierWrapper::localid</definition>
-        <argsstring></argsstring>
-        <name>localid</name>
-        <qualifiedname>BarrierWrapper::localid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="132" column="16" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="132" bodyend="-1"/>
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-        <type>unsigned</type>
-        <definition>unsigned BarrierWrapper::nrecv</definition>
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-        <name>nrecv</name>
-        <qualifiedname>BarrierWrapper::nrecv</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="129" column="12" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="129" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool BarrierWrapper::onoff</definition>
-        <argsstring></argsstring>
-        <name>onoff</name>
-        <qualifiedname>BarrierWrapper::onoff</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="136" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="136" bodyend="-1"/>
-        <referencedby refid="class_barrier_wrapper_1ac2bd182822af8aa50a2342e5b9d0b431" compoundref="_barrier_wrapper_8_h" startline="192" endline="192">off</referencedby>
-        <referencedby refid="class_barrier_wrapper_1a3719970a072571082333d6c7559fadf8" compoundref="_barrier_wrapper_8_h" startline="191" endline="191">on</referencedby>
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-        <type>std::map&lt; std::string, <ref refid="_barrier_wrapper_8_h_1a593762cb19f616c1beb5486d07dbe458" kindref="member">BWPtr</ref> &gt;</type>
-        <definition>std::map&lt;std::string, BWPtr&gt; BarrierWrapper::pending</definition>
-        <argsstring></argsstring>
-        <name>pending</name>
-        <qualifiedname>BarrierWrapper::pending</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="142" column="12" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="142" bodyend="-1"/>
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-        <type>unsigned</type>
-        <definition>unsigned BarrierWrapper::queued</definition>
-        <argsstring></argsstring>
-        <name>queued</name>
-        <qualifiedname>BarrierWrapper::queued</qualifiedname>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="128" column="12" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="128" bodyend="-1"/>
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-        <type>std::list&lt; <ref refid="class_barrier_wrapper_1a39928dc8d3ef7bc5aa6378fc6e28aa24" kindref="member">RecvElem</ref> &gt;</type>
-        <definition>std::list&lt;RecvElem&gt; BarrierWrapper::req</definition>
-        <argsstring></argsstring>
-        <name>req</name>
-        <qualifiedname>BarrierWrapper::req</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="127" column="13" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="127" bodyend="-1"/>
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-        <type><ref refid="class_timer" kindref="compound">Timer</ref></type>
-        <definition>Timer BarrierWrapper::timer</definition>
-        <argsstring></argsstring>
-        <name>timer</name>
-        <qualifiedname>BarrierWrapper::timer</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="135" column="9" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="135" bodyend="-1"/>
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-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="140" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="140" bodyend="-1"/>
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-        <referencedby refid="class_barrier_wrapper_1a5262ee0a294d53ee9f8d9bb650dfa79c" compoundref="_barrier_wrapper_8_h" startline="195" endline="195">setHeavyWeight</referencedby>
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-        <qualifiedname>BarrierWrapper::cbufsz</qualifiedname>
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-<para>Buffer size for checking working labels. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="152" column="17" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="152" bodyend="-1"/>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_basis.xml b/doxyxml/class_basis.xml
deleted file mode 100644
index 5447f60..0000000
--- a/doxyxml/class_basis.xml
+++ /dev/null
@@ -1,527 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_basis" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>Basis</compoundname>
-    <basecompoundref refid="class_pot_accel" prot="public" virt="non-virtual">PotAccel</basecompoundref>
-    <derivedcompoundref refid="class_axisymmetric_basis" prot="public" virt="non-virtual">AxisymmetricBasis</derivedcompoundref>
-    <derivedcompoundref refid="class_cylinder" prot="public" virt="non-virtual">Cylinder</derivedcompoundref>
-    <derivedcompoundref refid="class_cylinder" prot="public" virt="non-virtual">Cylinder</derivedcompoundref>
-    <includes refid="_basis_8_h" local="no">Basis.H</includes>
-    <sectiondef kind="user-defined">
-      <header>Utility functions</header>
-      <memberdef kind="function" id="class_basis_1a80975218d67cc019d69fefb7a207d344" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Basis::legendre_R</definition>
-        <argsstring>(int lmax, double x, Eigen::MatrixXd &amp;p)</argsstring>
-        <name>legendre_R</name>
-        <qualifiedname>Basis::legendre_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Compute Associated <ref refid="class_legendre" kindref="compound">Legendre</ref> Polynomials, return MatrixXd type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Basis.H" line="47" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_basis_1ad9a9f2f2d18335ae482b1d4e12490d0b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Basis::dlegendre_R</definition>
-        <argsstring>(int lmax, double x, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dp)</argsstring>
-        <name>dlegendre_R</name>
-        <qualifiedname>Basis::dlegendre_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Compute Associated <ref refid="class_legendre" kindref="compound">Legendre</ref> Polynomials and derivitives, return Matrix type </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Basis.H" line="51" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_basis_1a0779c0b0f74361d7861bbc19a194b63c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Basis::sinecosine_R</definition>
-        <argsstring>(int mmax, double phi, Eigen::VectorXd &amp;c, Eigen::VectorXd &amp;s)</argsstring>
-        <name>sinecosine_R</name>
-        <qualifiedname>Basis::sinecosine_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>s</declname>
-        </param>
-        <briefdescription>
-<para>Compute vectors of sines and cosines by recursion. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Basis.H" line="54" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_basis_1a3deeb360a898d1c144f7f6ad44813b3e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Basis::Basis</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf)</argsstring>
-        <name>Basis</name>
-        <qualifiedname>Basis::Basis</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Basis.H" line="15" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_basis_1abb4dbfbe9c234f44b1719a4d89dc3951" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void Basis::determine_acceleration_and_potential</definition>
-        <argsstring>(void)=0</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>Basis::determine_acceleration_and_potential</qualifiedname>
-        <reimplementedby refid="class_cylinder_1a2052d5c8fe1589f91215058ebd72ec2a">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_cylinder_1a2052d5c8fe1589f91215058ebd72ec2a">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_polar_basis_1acb8cf13811dc3e6d8556b70d00a4d8c6">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_spherical_basis_1a73773546d4e45c0ac442a9853ef42225">determine_acceleration_and_potential</reimplementedby>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>All derived classes must provide a method to compute the force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Basis.H" line="18" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_basis_1a8d4bece8ddfe81223177e63d76779284" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void Basis::determine_fields_at_point</definition>
-        <argsstring>(double x, double y, double z, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotx, double *tpoty, double *tpotz)=0</argsstring>
-        <name>determine_fields_at_point</name>
-        <qualifiedname>Basis::determine_fields_at_point</qualifiedname>
-        <reimplementedby refid="class_cylinder_1a4cffcad313069e21b01a648d656f2296">determine_fields_at_point</reimplementedby>
-        <reimplementedby refid="class_cylinder_1a4cffcad313069e21b01a648d656f2296">determine_fields_at_point</reimplementedby>
-        <reimplementedby refid="class_polar_basis_1a05e6a24b91fd7c8239bffa2df1bb9004">determine_fields_at_point</reimplementedby>
-        <reimplementedby refid="class_spherical_basis_1a84fc725d4e62f743a3846b8b5908a42e">determine_fields_at_point</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotx</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpoty</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Supply density, potential and derivatives at a point in Cartesian coordinates </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Basis.H" line="22" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_basis_1a3bcc5e3250f82d0ce476b096eabf342a" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void Basis::determine_fields_at_point_cyl</definition>
-        <argsstring>(double r, double z, double phi, double *tdens0, double *dpotl0, double *tdens, double *tpotl, double *tpotr, double *tpotz, double *tpotp)=0</argsstring>
-        <name>determine_fields_at_point_cyl</name>
-        <qualifiedname>Basis::determine_fields_at_point_cyl</qualifiedname>
-        <reimplementedby refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1">determine_fields_at_point_cyl</reimplementedby>
-        <reimplementedby refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1">determine_fields_at_point_cyl</reimplementedby>
-        <reimplementedby refid="class_polar_basis_1aeef7e49e923b2a7bd510c99f10cdb19e">determine_fields_at_point_cyl</reimplementedby>
-        <reimplementedby refid="class_spherical_basis_1ab11fe59ba8d3a8e251ea96e72d93b654">determine_fields_at_point_cyl</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>dpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Supply density, potential and derivatives at a point in cylindrical coordinates </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Basis.H" line="37" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_basis_1a34f7d4340bcd0c5452f430cebf5c3665" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void Basis::determine_fields_at_point_sph</definition>
-        <argsstring>(double r, double theta, double phi, double *tdens0, double *dpotl0, double *tdens, double *tpotl, double *tpotr, double *tpott, double *tpotp)=0</argsstring>
-        <name>determine_fields_at_point_sph</name>
-        <qualifiedname>Basis::determine_fields_at_point_sph</qualifiedname>
-        <reimplementedby refid="class_cylinder_1a021dbbef8f761e75fef8f25316bb71c8">determine_fields_at_point_sph</reimplementedby>
-        <reimplementedby refid="class_cylinder_1a021dbbef8f761e75fef8f25316bb71c8">determine_fields_at_point_sph</reimplementedby>
-        <reimplementedby refid="class_polar_basis_1a4d396e0af9e54f2f09009f05a5d95672">determine_fields_at_point_sph</reimplementedby>
-        <reimplementedby refid="class_spherical_basis_1ab139a46a2cc6813b375b041dbe3b6498">determine_fields_at_point_sph</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>theta</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>dpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpott</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Supply density, potential and derivatives at a point in spherical coordinates </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Basis.H" line="29" column="16"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Defines a basis-based potential and acceleration class. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="3">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Bessel</label>
-        <link refid="class_bessel"/>
-        <childnode refid="7" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>CBDisk</label>
-        <link refid="class_c_b_disk"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>Cylinder</label>
-        <link refid="class_cylinder"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>FlatDisk</label>
-        <link refid="class_flat_disk"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PolarBasis</label>
-        <link refid="class_polar_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="9">
-        <label>Sphere</label>
-        <link refid="class_sphere"/>
-        <childnode refid="7" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>SphericalBasis</label>
-        <link refid="class_spherical_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="2" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
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diff --git a/doxyxml/class_bess.xml b/doxyxml/class_bess.xml
deleted file mode 100644
index ae60916..0000000
--- a/doxyxml/class_bess.xml
+++ /dev/null
@@ -1,258 +0,0 @@
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-          <type>int</type>
-          <declname>Nz</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>tol</declname>
-          <defval>1.0e-18</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" line="21" column="3"/>
-        <referencedby refid="class_bess_1ab70b1c27a0b2c54152d2c5dc90bdf8be" compoundref="_bess_8_h" startline="26" endline="34">Bess</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_bess_1ab70b1c27a0b2c54152d2c5dc90bdf8be" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>Bess::Bess</definition>
-        <argsstring>(double order, unsigned int nroots)</argsstring>
-        <name>Bess</name>
-        <qualifiedname>Bess::Bess</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>order</declname>
-        </param>
-        <param>
-          <type>unsigned int</type>
-          <declname>nroots</declname>
-        </param>
-        <briefdescription>
-<para>Constructor: set the order and number of radial functions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" line="26" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" bodystart="26" bodyend="34"/>
-        <references refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" compoundref="_bess_8_h" startline="15">norm</references>
-        <references refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" compoundref="_bess_8_h" startline="13">nroots</references>
-        <references refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" compoundref="_bess_8_h" startline="14">order</references>
-        <references refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" compoundref="_bess_8_h" startline="15">roots</references>
-        <references refid="class_bess_1a1691ef9edcfa233355a7b5573b1279fd">zeros</references>
-      </memberdef>
-      <memberdef kind="function" id="class_bess_1a1aa42e1cfb0cd11686abc440602da558" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Bess::eval</definition>
-        <argsstring>(double &amp;x, unsigned &amp;m)</argsstring>
-        <name>eval</name>
-        <qualifiedname>Bess::eval</qualifiedname>
-        <param>
-          <type>double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>unsigned &amp;</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the <ref refid="class_bessel" kindref="compound">Bessel</ref> for x in [0, 1] for radial order m. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" line="51" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" bodystart="51" bodyend="55"/>
-        <references refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" compoundref="_bess_8_h" startline="15">norm</references>
-        <references refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" compoundref="_bess_8_h" startline="13">nroots</references>
-        <references refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" compoundref="_bess_8_h" startline="14">order</references>
-        <references refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" compoundref="_bess_8_h" startline="15">roots</references>
-      </memberdef>
-      <memberdef kind="function" id="class_bess_1a651fe3afc9d8d03ddb6ee22bfbbb14fb" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Bess::getNorm</definition>
-        <argsstring>(int m)</argsstring>
-        <name>getNorm</name>
-        <qualifiedname>Bess::getNorm</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-<para>Get the norm for radial order m. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" line="37" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" bodystart="37" bodyend="41"/>
-        <references refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" compoundref="_bess_8_h" startline="15">norm</references>
-        <references refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" compoundref="_bess_8_h" startline="13">nroots</references>
-      </memberdef>
-      <memberdef kind="function" id="class_bess_1a6cc73d37d8f69916acbfc9877fbb0c95" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Bess::operator()</definition>
-        <argsstring>(double &amp;x, const unsigned &amp;m)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>Bess::operator()</qualifiedname>
-        <param>
-          <type>double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const unsigned &amp;</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the <ref refid="class_bessel" kindref="compound">Bessel</ref> for x in [0, 1] for radial order m. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" line="44" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" bodystart="44" bodyend="48"/>
-        <references refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" compoundref="_bess_8_h" startline="15">norm</references>
-        <references refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" compoundref="_bess_8_h" startline="13">nroots</references>
-        <references refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" compoundref="_bess_8_h" startline="14">order</references>
-        <references refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" compoundref="_bess_8_h" startline="15">roots</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Generate orthonormal <ref refid="class_bessel" kindref="compound">Bessel</ref> functions of integral order. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" line="9" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Bess.H" bodystart="10" bodyend="57"/>
-    <listofallmembers>
-      <member refid="class_bess_1ab70b1c27a0b2c54152d2c5dc90bdf8be" prot="public" virt="non-virtual"><scope>Bess</scope><name>Bess</name></member>
-      <member refid="class_bess_1a70302bae78a8213f6e3203c5ac7b6638" prot="private" virt="non-virtual"><scope>Bess</scope><name>bracket</name></member>
-      <member refid="class_bess_1a1aa42e1cfb0cd11686abc440602da558" prot="public" virt="non-virtual"><scope>Bess</scope><name>eval</name></member>
-      <member refid="class_bess_1a651fe3afc9d8d03ddb6ee22bfbbb14fb" prot="public" virt="non-virtual"><scope>Bess</scope><name>getNorm</name></member>
-      <member refid="class_bess_1afb13c15adf7caa01a64fd39c4feba52d" prot="private" virt="non-virtual"><scope>Bess</scope><name>norm</name></member>
-      <member refid="class_bess_1ad0a07707af1e993106a28eaa22a89f95" prot="private" virt="non-virtual"><scope>Bess</scope><name>nroots</name></member>
-      <member refid="class_bess_1a6cc73d37d8f69916acbfc9877fbb0c95" prot="public" virt="non-virtual"><scope>Bess</scope><name>operator()</name></member>
-      <member refid="class_bess_1aa3ca4283d966a01e4f802906df7d3655" prot="private" virt="non-virtual"><scope>Bess</scope><name>order</name></member>
-      <member refid="class_bess_1aa3c4d5917d5e65226f13527ea148fe89" prot="private" virt="non-virtual"><scope>Bess</scope><name>roots</name></member>
-      <member refid="class_bess_1a1691ef9edcfa233355a7b5573b1279fd" prot="private" virt="non-virtual"><scope>Bess</scope><name>zeros</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_bessel.xml b/doxyxml/class_bessel.xml
deleted file mode 100644
index 120e596..0000000
--- a/doxyxml/class_bessel.xml
+++ /dev/null
@@ -1,1105 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_bessel" kind="class" language="C++" prot="public">
-    <compoundname>Bessel</compoundname>
-    <basecompoundref refid="class_spherical_basis" prot="public" virt="non-virtual">SphericalBasis</basecompoundref>
-    <includes refid="_bessel_8_h" local="no">Bessel.H</includes>
-    <innerclass refid="class_bessel_1_1_r_grid" prot="private">Bessel::RGrid</innerclass>
-    <innerclass refid="class_bessel_1_1_roots" prot="private">Bessel::Roots</innerclass>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_bessel_1a9cb5e42e13a8312ea49202b6675204ca" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_bessel_1_1_r_grid" kindref="compound">RGrid</ref> &gt;</type>
-        <definition>std::vector&lt;RGrid&gt; Bessel::dens_grid</definition>
-        <argsstring></argsstring>
-        <name>dens_grid</name>
-        <qualifiedname>Bessel::dens_grid</qualifiedname>
-        <briefdescription>
-<para>Grid storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="50" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="50" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1aa2f3ecee293522f31d7a43300b8259d5" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Bessel::firstime_accel</definition>
-        <argsstring></argsstring>
-        <name>firstime_accel</name>
-        <qualifiedname>Bessel::firstime_accel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="37" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1a130d6cddd30c2e20a29d5124929389c2" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Bessel::firstime_coef</definition>
-        <argsstring></argsstring>
-        <name>firstime_coef</name>
-        <qualifiedname>Bessel::firstime_coef</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="36" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1ab6a7985fc7abc4bf90c606e2901488f4" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_bessel_1_1_roots" kindref="compound">Roots</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;Roots&gt; Bessel::p</definition>
-        <argsstring></argsstring>
-        <name>p</name>
-        <qualifiedname>Bessel::p</qualifiedname>
-        <briefdescription>
-<para>Root database isntance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="73" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="73" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1a1821dbe893dd1686dde6942bffa6f19f" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_bessel_1_1_r_grid" kindref="compound">RGrid</ref> &gt;</type>
-        <definition>std::vector&lt;RGrid&gt; Bessel::potl_grid</definition>
-        <argsstring></argsstring>
-        <name>potl_grid</name>
-        <qualifiedname>Bessel::potl_grid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="50" column="25" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="50" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1a7a6860aa0217c019251672f61605fc6f" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Bessel::r_grid</definition>
-        <argsstring></argsstring>
-        <name>r_grid</name>
-        <qualifiedname>Bessel::r_grid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="51" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="51" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1a6f08a0ebccea5edf38f5c89af2b7b616" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Bessel::r_grid_del</definition>
-        <argsstring></argsstring>
-        <name>r_grid_del</name>
-        <qualifiedname>Bessel::r_grid_del</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="52" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="52" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1a71e4d3aace12dd36957a2293fa5ac5cd" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Bessel::RNUM</definition>
-        <argsstring></argsstring>
-        <name>RNUM</name>
-        <qualifiedname>Bessel::RNUM</qualifiedname>
-        <briefdescription>
-<para>Number of entries in the fixed table. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="88" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="88" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
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-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; Bessel::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>Bessel::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="85" column="25" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="85" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
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-        <type>double</type>
-        <definition>double Bessel::dens</definition>
-        <argsstring>(double r, int n)</argsstring>
-        <name>dens</name>
-        <qualifiedname>Bessel::dens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Density and potential members. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="77" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1a03bab043703d385f3889780dfbf52337" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Bessel::get_dens</definition>
-        <argsstring>(double r, int l, double *coef)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>Bessel::get_dens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>coef</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="30" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1a2880028fe7092ce5a0dbcc2faeee3fc9" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Bessel::get_dens</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>Bessel::get_dens</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a0e2377c1cdc1335562343e01e4dee7cd">get_dens</reimplements>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="28" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1a6d72c85b86f8a75cbe0e6b68ed79372b" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Bessel::get_dens_coefs</definition>
-        <argsstring>(int l, double *coef, double *p)</argsstring>
-        <name>get_dens_coefs</name>
-        <qualifiedname>Bessel::get_dens_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="25" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1ac29bd18788d05f1c59fe5d631b439f24" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Bessel::get_dpotl</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dp, int tid)</argsstring>
-        <name>get_dpotl</name>
-        <qualifiedname>Bessel::get_dpotl</qualifiedname>
-        <reimplements refid="class_spherical_basis_1ac3eafe5175c669b7b7b86932c764af32">get_dpotl</reimplements>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="26" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1aec83b6133254edacb1c16f88a3293d51" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Bessel::get_pot_coefs</definition>
-        <argsstring>(int l, double *coef, double *p, double *dp)</argsstring>
-        <name>get_pot_coefs</name>
-        <qualifiedname>Bessel::get_pot_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>dp</declname>
-        </param>
-        <briefdescription>
-<para>Required members for Spherical <ref refid="class_basis" kindref="compound">Basis</ref>. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="22" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1a76a89cfe9a226d504415a12ef6904e82" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Bessel::get_pot_coefs_safe</definition>
-        <argsstring>(int l, double *coef, double *p, double *dp, double **potd1, double **dpot1)</argsstring>
-        <name>get_pot_coefs_safe</name>
-        <qualifiedname>Bessel::get_pot_coefs_safe</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>dp</declname>
-        </param>
-        <param>
-          <type>double **</type>
-          <declname>potd1</declname>
-        </param>
-        <param>
-          <type>double **</type>
-          <declname>dpot1</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="23" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1a50c293c90a3bca22c6146e0239edb15b" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Bessel::get_potl</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>Bessel::get_potl</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a63cdde991a10a6309a97e3af6b5833b3">get_potl</reimplements>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="27" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1a478e81687b976d233bc5d81b572bafb5" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Bessel::get_potl_dens</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;d, int tid)</argsstring>
-        <name>get_potl_dens</name>
-        <qualifiedname>Bessel::get_potl_dens</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a2823c30f130d1a33768cce788b05c34e">get_potl_dens</reimplements>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="29" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1abab1334fcaeedd6ad07b0afda79741d6" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Bessel::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>Bessel::initialize</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a33f78daf1c5dcf5ac4d327662963b1a5">initialize</reimplements>
-        <briefdescription>
-<para>Initialize parameters from YAML. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="34" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1abbd18ef40e3f33de7be5e83d18e91edf" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Bessel::make_grid</definition>
-        <argsstring>(double rmin, double rmax, int lmax, int nmax)</argsstring>
-        <name>make_grid</name>
-        <qualifiedname>Bessel::make_grid</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <briefdescription>
-<para>Make the density and potential grid. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="82" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_bessel_1a44e0f1965c8d21ef4fc2c8d50a4c0853" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Bessel::potl</definition>
-        <argsstring>(double r, int n)</argsstring>
-        <name>potl</name>
-        <qualifiedname>Bessel::potl</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="78" column="10"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_bessel_1a75ccbb379912afb3dafd8239ea615ddd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Bessel::Bessel</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf, MixtureBasis *m=0)</argsstring>
-        <name>Bessel</name>
-        <qualifiedname>Bessel::Bessel</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <param>
-          <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-          <declname>m</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="93" column="3"/>
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-      <memberdef kind="function" id="class_bessel_1a5ce729b084cdc83945b8ee78e9d46971" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual Bessel::~Bessel</definition>
-        <argsstring>()</argsstring>
-        <name>~Bessel</name>
-        <qualifiedname>Bessel::~Bessel</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="96" column="11" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="96" bodyend="96"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Computes the potential, acceleration and density using eigenfunctions of the Spherical Laplacian: spherical <ref refid="class_bessel" kindref="compound">Bessel</ref> functions </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="3">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Bessel</label>
-        <link refid="class_bessel"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="2">
-        <label>SphericalBasis</label>
-        <link refid="class_spherical_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="3">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Bessel</label>
-        <link refid="class_bessel"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="10" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="9">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="11">
-        <label>MixtureBasis</label>
-        <link refid="class_mixture_basis"/>
-        <childnode refid="12" relation="usage">
-          <edgelabel>p</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="9" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>SphericalBasis</label>
-        <link refid="class_spherical_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-        <childnode refid="11" relation="usage">
-          <edgelabel>mix</edgelabel>
-        </childnode>
-      </node>
-      <node id="10">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="12">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>exp_in</edgelabel>
-          <edgelabel>exp_out</edgelabel>
-        </childnode>
-        <childnode refid="11" relation="usage">
-          <edgelabel>mix_in</edgelabel>
-          <edgelabel>mix_out</edgelabel>
-        </childnode>
-      </node>
-      <node id="6">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="15" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="16" bodyend="97"/>
-    <listofallmembers>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>Bessel</scope><name>atol</name></member>
-      <member refid="class_axisymmetric_basis_1ab965e325410d79d567903f51dd2c6dd0" prot="public" virt="non-virtual"><scope>Bessel</scope><name>AxisymmetricBasis</name></member>
-      <member refid="class_axisymmetric_basis_1aa4fc18ccf44bdf56ac60b7caa68b1cfc" prot="private" virt="non-virtual"><scope>Bessel</scope><name>b_Hall</name></member>
-      <member refid="class_basis_1a3deeb360a898d1c144f7f6ad44813b3e" prot="public" virt="non-virtual"><scope>Bessel</scope><name>Basis</name></member>
-      <member refid="class_bessel_1a75ccbb379912afb3dafd8239ea615ddd" prot="public" virt="non-virtual"><scope>Bessel</scope><name>Bessel</name></member>
-      <member refid="class_spherical_basis_1a1066050b6ba526768710115eced4144f" prot="protected" virt="non-virtual"><scope>Bessel</scope><name>biorthogonality_check</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>Bessel</scope><name>cC</name></member>
-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>Bessel</scope><name>cc_lock</name></member>
-      <member refid="class_spherical_basis_1a1fb812ef3e4559b795aa1407ceaa6079" prot="protected" virt="virtual"><scope>Bessel</scope><name>check_range</name></member>
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diff --git a/doxyxml/class_bessel_1_1_r_grid.xml b/doxyxml/class_bessel_1_1_r_grid.xml
deleted file mode 100644
index 9dca364..0000000
--- a/doxyxml/class_bessel_1_1_r_grid.xml
+++ /dev/null
@@ -1,61 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_bessel_1_1_r_grid" kind="class" language="C++" prot="private">
-    <compoundname>Bessel::RGrid</compoundname>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_bessel_1_1_r_grid_1a41dfe526eebd3ab61209bff4a993c0a7" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Bessel::RGrid::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>Bessel::RGrid::nmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="45" column="9" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="45" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1_1_r_grid_1a7918d77a504de1401dd613be5a9320ae" prot="public" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Bessel::RGrid::rw</definition>
-        <argsstring></argsstring>
-        <name>rw</name>
-        <qualifiedname>Bessel::RGrid::rw</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Bessel::RGrid::rw2</definition>
-        <argsstring></argsstring>
-        <name>rw2</name>
-        <qualifiedname>Bessel::RGrid::rw2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="44" column="21" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
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-<para>Grid to hold tabulated basis. </para>
-    </briefdescription>
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-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="40" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="41" bodyend="46"/>
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-      <member refid="class_bessel_1_1_r_grid_1a7918d77a504de1401dd613be5a9320ae" prot="public" virt="non-virtual"><scope>Bessel::RGrid</scope><name>rw</name></member>
-      <member refid="class_bessel_1_1_r_grid_1ab409745c363964963a86ac6399d4a4cb" prot="public" virt="non-virtual"><scope>Bessel::RGrid</scope><name>rw2</name></member>
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diff --git a/doxyxml/class_bessel_1_1_roots.xml b/doxyxml/class_bessel_1_1_roots.xml
deleted file mode 100644
index e0d6947..0000000
--- a/doxyxml/class_bessel_1_1_roots.xml
+++ /dev/null
@@ -1,108 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_bessel_1_1_roots" kind="class" language="C++" prot="private">
-    <compoundname>Bessel::Roots</compoundname>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_bessel_1_1_roots_1a7ba040b94f60e6b66f017ac23ed705f1" prot="public" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Bessel::Roots::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>Bessel::Roots::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="63" column="21" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="63" bodyend="-1"/>
-        <referencedby refid="class_bessel_1_1_roots_1ae1df7578c906f6021a157ab0cc6c01ca" compoundref="_bessel_8_h" startline="65" endline="67">Roots</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1_1_roots_1a3655d15dfb45bd990c5d1b2145ef491a" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Bessel::Roots::l</definition>
-        <argsstring></argsstring>
-        <name>l</name>
-        <qualifiedname>Bessel::Roots::l</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="60" column="9" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="60" bodyend="-1"/>
-        <referencedby refid="class_bessel_1_1_roots_1ae1df7578c906f6021a157ab0cc6c01ca" compoundref="_bessel_8_h" startline="65" endline="67">Roots</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_bessel_1_1_roots_1aca77b6e5df7804f9d1edc667092f6990" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Bessel::Roots::n</definition>
-        <argsstring></argsstring>
-        <name>n</name>
-        <qualifiedname>Bessel::Roots::n</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="61" column="9" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="61" bodyend="-1"/>
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-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
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-        <type></type>
-        <definition>Bessel::Roots::Roots</definition>
-        <argsstring>(int L, int nmax)</argsstring>
-        <name>Roots</name>
-        <qualifiedname>Bessel::Roots::Roots</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>L</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="65" column="5" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="65" bodyend="67"/>
-        <references refid="class_bessel_1_1_roots_1a7ba040b94f60e6b66f017ac23ed705f1" compoundref="_bessel_8_h" startline="63">a</references>
-        <references refid="class_bessel_1_1_roots_1a3655d15dfb45bd990c5d1b2145ef491a" compoundref="_bessel_8_h" startline="60">l</references>
-        <references refid="class_bessel_1_1_roots_1aca77b6e5df7804f9d1edc667092f6990" compoundref="_bessel_8_h" startline="61">n</references>
-        <references refid="_bessel_8_h_1a3d4bb7cde7a057d3575dc6bbd8c1bd96">sbessjz</references>
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-        <type></type>
-        <definition>Bessel::Roots::~Roots</definition>
-        <argsstring>()</argsstring>
-        <name>~Roots</name>
-        <qualifiedname>Bessel::Roots::~Roots</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="69" column="5" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="69" bodyend="69"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Cache roots for spherical <ref refid="class_bessel" kindref="compound">Bessel</ref> functions. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/Bessel.H" line="56" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Bessel.H" bodystart="57" bodyend="70"/>
-    <listofallmembers>
-      <member refid="class_bessel_1_1_roots_1a7ba040b94f60e6b66f017ac23ed705f1" prot="public" virt="non-virtual"><scope>Bessel::Roots</scope><name>a</name></member>
-      <member refid="class_bessel_1_1_roots_1a3655d15dfb45bd990c5d1b2145ef491a" prot="public" virt="non-virtual"><scope>Bessel::Roots</scope><name>l</name></member>
-      <member refid="class_bessel_1_1_roots_1aca77b6e5df7804f9d1edc667092f6990" prot="public" virt="non-virtual"><scope>Bessel::Roots</scope><name>n</name></member>
-      <member refid="class_bessel_1_1_roots_1ae1df7578c906f6021a157ab0cc6c01ca" prot="public" virt="non-virtual"><scope>Bessel::Roots</scope><name>Roots</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_biorth.xml b/doxyxml/class_biorth.xml
deleted file mode 100644
index 7ce50e7..0000000
--- a/doxyxml/class_biorth.xml
+++ /dev/null
@@ -1,286 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_biorth" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>Biorth</compoundname>
-    <derivedcompoundref refid="class_axi_sym_biorth" prot="public" virt="non-virtual">AxiSymBiorth</derivedcompoundref>
-    <derivedcompoundref refid="class_one_d_biorth" prot="public" virt="non-virtual">OneDBiorth</derivedcompoundref>
-    <includes refid="biorth_8_h" local="no">biorth.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" prot="public" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string Biorth::BiorthID</definition>
-        <argsstring></argsstring>
-        <name>BiorthID</name>
-        <qualifiedname>Biorth::BiorthID</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="20" column="15" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="20" bodyend="-1"/>
-        <referencedby refid="class_biorth_1a3331c0ec9dabbed562c32c3d59c7b1bb" compoundref="biorth_8_h" startline="35" endline="38">bomb</referencedby>
-        <referencedby refid="class_biorth_1a732367609f458cf4128bb37f2641c30b" compoundref="biorth_8_h" startline="31" endline="31">id</referencedby>
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-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_biorth_1a3331c0ec9dabbed562c32c3d59c7b1bb" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Biorth::bomb</definition>
-        <argsstring>(const char *s)</argsstring>
-        <name>bomb</name>
-        <qualifiedname>Biorth::bomb</qualifiedname>
-        <param>
-          <type>const char *</type>
-          <declname>s</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="35" column="8" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="35" bodyend="38"/>
-        <references refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" compoundref="biorth_8_h" startline="20">BiorthID</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_1ae6bb6919cb7f72259d5ad36946f1f088" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double Biorth::dens</definition>
-        <argsstring>(const int, const int, const double)=0</argsstring>
-        <name>dens</name>
-        <qualifiedname>Biorth::dens</qualifiedname>
-        <reimplementedby refid="class_sphere_s_l_1af160b934c0c8e1ad328fd2c6fab28adf">dens</reimplementedby>
-        <reimplementedby refid="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4">dens</reimplementedby>
-        <reimplementedby refid="class_b_s_disk_1a04a5bc7ae5e418394ebf7b3ba4492b85">dens</reimplementedby>
-        <reimplementedby refid="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4">dens</reimplementedby>
-        <reimplementedby refid="class_one_d_trig_1a87f04d45ce73f86b46ccd5bdd588995c">dens</reimplementedby>
-        <reimplementedby refid="class_biorth_grid_1a063a0e7a1e95de7279c414ec1a6efbe9">dens</reimplementedby>
-        <reimplementedby refid="class_c_b_sphere_1aa15eab84732036c237fed5b453f26890">dens</reimplementedby>
-        <reimplementedby refid="class_h_q_sphere_1a396c43ce8324193aa47a5873e025cfd1">dens</reimplementedby>
-        <reimplementedby refid="class_b_s_sphere_1a9f75d80acfcf6adcfb4409dfea289d44">dens</reimplementedby>
-        <reimplementedby refid="class_axi_sym_biorth_1a6cb90b729dbfb31340bf8930049df4cd">dens</reimplementedby>
-        <reimplementedby refid="class_one_d_biorth_1a7ce54ca54b7d1fdebebfc9d33d8899e5">dens</reimplementedby>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="25" column="18"/>
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-      <memberdef kind="function" id="class_biorth_1a732367609f458cf4128bb37f2641c30b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>const std::string &amp;</type>
-        <definition>const std::string &amp; Biorth::id</definition>
-        <argsstring>(void)</argsstring>
-        <name>id</name>
-        <qualifiedname>Biorth::id</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="31" column="28" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="31" bodyend="31"/>
-        <references refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" compoundref="biorth_8_h" startline="20">BiorthID</references>
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-        <type>double</type>
-        <definition>virtual double Biorth::krnl</definition>
-        <argsstring>(const int, const int)=0</argsstring>
-        <name>krnl</name>
-        <qualifiedname>Biorth::krnl</qualifiedname>
-        <reimplementedby refid="class_biorth_grid_1a12dbda3602ad9fd185974e861d2d4847">krnl</reimplementedby>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="26" column="18"/>
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-        <type>double</type>
-        <definition>virtual double Biorth::norm</definition>
-        <argsstring>(const int, const int)=0</argsstring>
-        <name>norm</name>
-        <qualifiedname>Biorth::norm</qualifiedname>
-        <reimplementedby refid="class_biorth_grid_1a06dd94c9755d0d5b1bafee812ecc475a">norm</reimplementedby>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="27" column="18"/>
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-        <type>double</type>
-        <definition>virtual double Biorth::potl</definition>
-        <argsstring>(const int, const int, const double)=0</argsstring>
-        <name>potl</name>
-        <qualifiedname>Biorth::potl</qualifiedname>
-        <reimplementedby refid="class_sphere_s_l_1a0618be0d4ee7e18fce3656cff6701794">potl</reimplementedby>
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-        <reimplementedby refid="class_b_s_disk_1a176472b6fa88fe5307bd2d9835c22cc9">potl</reimplementedby>
-        <reimplementedby refid="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae">potl</reimplementedby>
-        <reimplementedby refid="class_one_d_trig_1a250a1bbe08ff11c6c84174f152b3c4bc">potl</reimplementedby>
-        <reimplementedby refid="class_biorth_grid_1acfeb044faae7f0297ea3ec03c1bd5d3c">potl</reimplementedby>
-        <reimplementedby refid="class_c_b_sphere_1a8e11342a326bd8d9162ed1f080b2289d">potl</reimplementedby>
-        <reimplementedby refid="class_h_q_sphere_1a473272545f1cba15a45d79ece84cbae2">potl</reimplementedby>
-        <reimplementedby refid="class_b_s_sphere_1a74e4f6e7bb5a702c339b7ed08b1b147f">potl</reimplementedby>
-        <reimplementedby refid="class_axi_sym_biorth_1aaec9137305d7c2eed46ca59c5ea777b1">potl</reimplementedby>
-        <reimplementedby refid="class_one_d_biorth_1a29e8b3603be9cf51b2ac0e0597fd9194">potl</reimplementedby>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="24" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_1a83c4824d7003048794102f54152cfdbc" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual Biorth::~Biorth</definition>
-        <argsstring>()</argsstring>
-        <name>~Biorth</name>
-        <qualifiedname>Biorth::~Biorth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="22" column="11" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="22" bodyend="22"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
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-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>AxiSymBiorth</label>
-        <link refid="class_axi_sym_biorth"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>BSDisk</label>
-        <link refid="class_b_s_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>BSSphere</label>
-        <link refid="class_b_s_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
-      </node>
-      <node id="5">
-        <label>BiorthGrid</label>
-        <link refid="class_biorth_grid"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>CBDisk</label>
-        <link refid="class_c_b_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>CBSphere</label>
-        <link refid="class_c_b_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>HQSphere</label>
-        <link refid="class_h_q_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>OneDBiorth</label>
-        <link refid="class_one_d_biorth"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>OneDTrig</label>
-        <link refid="class_one_d_trig"/>
-        <childnode refid="10" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>SphereSL</label>
-        <link refid="class_sphere_s_l"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="16" column="1" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="17" bodyend="40"/>
-    <listofallmembers>
-      <member refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" prot="public" virt="non-virtual"><scope>Biorth</scope><name>BiorthID</name></member>
-      <member refid="class_biorth_1a3331c0ec9dabbed562c32c3d59c7b1bb" prot="public" virt="non-virtual"><scope>Biorth</scope><name>bomb</name></member>
-      <member refid="class_biorth_1ae6bb6919cb7f72259d5ad36946f1f088" prot="public" virt="pure-virtual"><scope>Biorth</scope><name>dens</name></member>
-      <member refid="class_biorth_1a732367609f458cf4128bb37f2641c30b" prot="public" virt="non-virtual"><scope>Biorth</scope><name>id</name></member>
-      <member refid="class_biorth_1a582200336065fac43a3282ee0671cffb" prot="public" virt="pure-virtual"><scope>Biorth</scope><name>krnl</name></member>
-      <member refid="class_biorth_1a4997a44fb308362868547f4eb0f23c5a" prot="public" virt="pure-virtual"><scope>Biorth</scope><name>norm</name></member>
-      <member refid="class_biorth_1a26e01c406def571a76990d1fc1a02b7f" prot="public" virt="pure-virtual"><scope>Biorth</scope><name>potl</name></member>
-      <member refid="class_biorth_1a83c4824d7003048794102f54152cfdbc" prot="public" virt="virtual"><scope>Biorth</scope><name>~Biorth</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_biorth_cube.xml b/doxyxml/class_biorth_cube.xml
deleted file mode 100644
index 3ede455..0000000
--- a/doxyxml/class_biorth_cube.xml
+++ /dev/null
@@ -1,392 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_biorth_cube" kind="class" language="C++" prot="public">
-    <compoundname>BiorthCube</compoundname>
-    <includes refid="_biorth_cube_8_h" local="no">BiorthCube.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="class_biorth_cube_1a068cf3cab9677dae5e9017496e008c18" prot="public" static="no">
-        <type>Eigen::Tensor&lt; std::complex&lt; double &gt;, 3 &gt;</type>
-        <definition>using BiorthCube::coefType =  Eigen::Tensor&lt;std::complex&lt;double&gt;, 3&gt;</definition>
-        <argsstring></argsstring>
-        <name>coefType</name>
-        <qualifiedname>BiorthCube::coefType</qualifiedname>
-        <briefdescription>
-<para>Coefficient type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="60" column="3" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="60" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_biorth_cube_1acd4e1cabf750b18970d5c50aa5defcaf" prot="protected" static="no" mutable="no">
-        <type>YAML::Node</type>
-        <definition>YAML::Node BiorthCube::conf</definition>
-        <argsstring></argsstring>
-        <name>conf</name>
-        <qualifiedname>BiorthCube::conf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="44" column="14" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cube_1a3658240f83a2aaf0226f4ec600e332f4" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string BiorthCube::forceID</definition>
-        <argsstring></argsstring>
-        <name>forceID</name>
-        <qualifiedname>BiorthCube::forceID</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="46" column="24" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cube_1aad695296bfbfaccff6108fece786b756" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string BiorthCube::geometry</definition>
-        <argsstring></argsstring>
-        <name>geometry</name>
-        <qualifiedname>BiorthCube::geometry</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="46" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cube_1a07ff54b4f2e2c78544ba952ab1a6f0a1" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCube::knots</definition>
-        <argsstring></argsstring>
-        <name>knots</name>
-        <qualifiedname>BiorthCube::knots</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="50" column="7" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="50" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cube_1a0bea64d4b0761c2422973f3a96e73925" prot="protected" static="no" mutable="no">
-        <type>Eigen::Vector3i</type>
-        <definition>Eigen::Vector3i BiorthCube::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>BiorthCube::nmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="48" column="24" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cube_1af0c19291bcb3acb96b1599ce478b92f7" prot="protected" static="no" mutable="no">
-        <type>Eigen::Vector3i</type>
-        <definition>Eigen::Vector3i BiorthCube::nmin</definition>
-        <argsstring></argsstring>
-        <name>nmin</name>
-        <qualifiedname>BiorthCube::nmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="48" column="19" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cube_1add0c259622a277a9647d37caf48d0886" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool BiorthCube::verbose</definition>
-        <argsstring></argsstring>
-        <name>verbose</name>
-        <qualifiedname>BiorthCube::verbose</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="52" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="52" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-static-attrib">
-      <memberdef kind="variable" id="class_biorth_cube_1a3665301c5caa23d01b575bfd2bc2efd2" prot="protected" static="yes" constexpr="yes" mutable="no">
-        <type>constexpr double</type>
-        <definition>constexpr double BiorthCube::dfac</definition>
-        <argsstring></argsstring>
-        <name>dfac</name>
-        <qualifiedname>BiorthCube::dfac</qualifiedname>
-        <initializer>= 2.0*M_PI</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="54" column="27" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="54" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cube_1a040d3d6a5b1f935b72bb40ff3e56bf4e" prot="protected" static="yes" constexpr="yes" mutable="no">
-        <type>constexpr std::complex&lt; double &gt;</type>
-        <definition>constexpr std::complex&lt;double&gt; BiorthCube::kfac</definition>
-        <argsstring></argsstring>
-        <name>kfac</name>
-        <qualifiedname>BiorthCube::kfac</qualifiedname>
-        <initializer>{0.0, <ref refid="class_biorth_cube_1a3665301c5caa23d01b575bfd2bc2efd2" kindref="member">dfac</ref>}</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="55" column="33" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="55" bodyend="55"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_biorth_cube_1aa591d0c9bcdb8a7327bbad9b94809945" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCube::mpi</definition>
-        <argsstring></argsstring>
-        <name>mpi</name>
-        <qualifiedname>BiorthCube::mpi</qualifiedname>
-        <briefdescription>
-<para>Flag for MPI enabled (default: 0=off) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="63" column="14" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="63" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_biorth_cube_1a6c46abed8126eb133f6af269f0532a3b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>BiorthCube::BiorthCube</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>BiorthCube</name>
-        <qualifiedname>BiorthCube::BiorthCube</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="66" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cube_1a2266a8e7e3af1f1b573079d5d3bb67f0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::complex&lt; double &gt;</type>
-        <definition>std::complex&lt; double &gt; BiorthCube::dens</definition>
-        <argsstring>(Eigen::Vector3d x, Eigen::Vector3i n)</argsstring>
-        <name>dens</name>
-        <qualifiedname>BiorthCube::dens</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::Vector3i</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Get density for dimensionless coord with harmonic order l and radial orer n <linebreak/>
- </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="75" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cube_1aba90ca6c14cfe914f7f928fe26942924" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::Vector3cd</type>
-        <definition>Eigen::Vector3cd BiorthCube::force</definition>
-        <argsstring>(Eigen::Vector3d x, Eigen::Vector3i n)</argsstring>
-        <name>force</name>
-        <qualifiedname>BiorthCube::force</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::Vector3i</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Get radial force for dimensionless coord with harmonic order l and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="78" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cube_1a45152e8a43f0a3832c57cbae1b0d6803" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::complex&lt; double &gt;</type>
-        <definition>std::complex&lt; double &gt; BiorthCube::get_dens</definition>
-        <argsstring>(const coefType &amp;c, Eigen::Vector3d x)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>BiorthCube::get_dens</qualifiedname>
-        <param>
-          <type>const <ref refid="class_biorth_cube_1a068cf3cab9677dae5e9017496e008c18" kindref="member">coefType</ref> &amp;</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>Eigen::Vector3d</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Get density for dimensionless coord with harmonic order l and radial orer n <linebreak/>
- </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="84" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cube_1a164c49351a8f572c581aac3a8d33c212" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::Vector3cd</type>
-        <definition>Eigen::Vector3cd BiorthCube::get_force</definition>
-        <argsstring>(const coefType &amp;c, Eigen::Vector3d x)</argsstring>
-        <name>get_force</name>
-        <qualifiedname>BiorthCube::get_force</qualifiedname>
-        <param>
-          <type>const <ref refid="class_biorth_cube_1a068cf3cab9677dae5e9017496e008c18" kindref="member">coefType</ref> &amp;</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>Eigen::Vector3d</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Get radial force for dimensionless coord with harmonic order l and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="87" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cube_1a9112d07edabc3d5fe2fd9aed9907bf59" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::complex&lt; double &gt;</type>
-        <definition>std::complex&lt; double &gt; BiorthCube::get_pot</definition>
-        <argsstring>(const coefType &amp;c, Eigen::Vector3d x)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>BiorthCube::get_pot</qualifiedname>
-        <param>
-          <type>const <ref refid="class_biorth_cube_1a068cf3cab9677dae5e9017496e008c18" kindref="member">coefType</ref> &amp;</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>Eigen::Vector3d</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Get potential for dimensionless coord with harmonic order m and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="81" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cube_1a83f2f3c93e5d6fa2b75edca1b1e43739" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::MatrixXcd</type>
-        <definition>Eigen::MatrixXcd BiorthCube::orthoCheck</definition>
-        <argsstring>()</argsstring>
-        <name>orthoCheck</name>
-        <qualifiedname>BiorthCube::orthoCheck</qualifiedname>
-        <briefdescription>
-<para>For pyEXP. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="90" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cube_1a485ee9a9592263401e41973a390fa0b4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::complex&lt; double &gt;</type>
-        <definition>std::complex&lt; double &gt; BiorthCube::pot</definition>
-        <argsstring>(Eigen::Vector3d x, Eigen::Vector3i n)</argsstring>
-        <name>pot</name>
-        <qualifiedname>BiorthCube::pot</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::Vector3i</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Get potential for dimensionless coord with harmonic order m and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="72" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cube_1a5626e1a8872fdae3515207c17949ab6e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual BiorthCube::~BiorthCube</definition>
-        <argsstring>()</argsstring>
-        <name>~BiorthCube</name>
-        <qualifiedname>BiorthCube::~BiorthCube</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="69" column="11" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="69" bodyend="69"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>! <ref refid="class_biorth_cube" kindref="compound">BiorthCube</ref> grid class </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/BiorthCube.H" line="39" column="1" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCube.H" bodystart="40" bodyend="92"/>
-    <listofallmembers>
-      <member refid="class_biorth_cube_1a6c46abed8126eb133f6af269f0532a3b" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>BiorthCube</name></member>
-      <member refid="class_biorth_cube_1a068cf3cab9677dae5e9017496e008c18" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>coefType</name></member>
-      <member refid="class_biorth_cube_1acd4e1cabf750b18970d5c50aa5defcaf" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>conf</name></member>
-      <member refid="class_biorth_cube_1a2266a8e7e3af1f1b573079d5d3bb67f0" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>dens</name></member>
-      <member refid="class_biorth_cube_1a3665301c5caa23d01b575bfd2bc2efd2" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>dfac</name></member>
-      <member refid="class_biorth_cube_1aba90ca6c14cfe914f7f928fe26942924" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>force</name></member>
-      <member refid="class_biorth_cube_1a3658240f83a2aaf0226f4ec600e332f4" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>forceID</name></member>
-      <member refid="class_biorth_cube_1aad695296bfbfaccff6108fece786b756" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>geometry</name></member>
-      <member refid="class_biorth_cube_1a45152e8a43f0a3832c57cbae1b0d6803" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>get_dens</name></member>
-      <member refid="class_biorth_cube_1a164c49351a8f572c581aac3a8d33c212" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>get_force</name></member>
-      <member refid="class_biorth_cube_1a9112d07edabc3d5fe2fd9aed9907bf59" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>get_pot</name></member>
-      <member refid="class_biorth_cube_1a040d3d6a5b1f935b72bb40ff3e56bf4e" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>kfac</name></member>
-      <member refid="class_biorth_cube_1a07ff54b4f2e2c78544ba952ab1a6f0a1" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>knots</name></member>
-      <member refid="class_biorth_cube_1aa591d0c9bcdb8a7327bbad9b94809945" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>mpi</name></member>
-      <member refid="class_biorth_cube_1a0bea64d4b0761c2422973f3a96e73925" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>nmax</name></member>
-      <member refid="class_biorth_cube_1af0c19291bcb3acb96b1599ce478b92f7" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>nmin</name></member>
-      <member refid="class_biorth_cube_1a83f2f3c93e5d6fa2b75edca1b1e43739" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>orthoCheck</name></member>
-      <member refid="class_biorth_cube_1a485ee9a9592263401e41973a390fa0b4" prot="public" virt="non-virtual"><scope>BiorthCube</scope><name>pot</name></member>
-      <member refid="class_biorth_cube_1add0c259622a277a9647d37caf48d0886" prot="protected" virt="non-virtual"><scope>BiorthCube</scope><name>verbose</name></member>
-      <member refid="class_biorth_cube_1a5626e1a8872fdae3515207c17949ab6e" prot="public" virt="virtual"><scope>BiorthCube</scope><name>~BiorthCube</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_biorth_cyl.xml b/doxyxml/class_biorth_cyl.xml
deleted file mode 100644
index 2d833d5..0000000
--- a/doxyxml/class_biorth_cyl.xml
+++ /dev/null
@@ -1,1617 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_biorth_cyl" kind="class" language="C++" prot="public">
-    <compoundname>BiorthCyl</compoundname>
-    <includes refid="_biorth_cyl_8_h" local="no">BiorthCyl.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_biorth_cyl_1ab2a9bf64da5f28cf553a561db3c0c66b" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::acylcut</definition>
-        <argsstring></argsstring>
-        <name>acylcut</name>
-        <qualifiedname>BiorthCyl::acylcut</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="49" column="40" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="49" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1ace0f4244f1ab8c83cb266cea3a82610f" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::acyltbl</definition>
-        <argsstring></argsstring>
-        <name>acyltbl</name>
-        <qualifiedname>BiorthCyl::acyltbl</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="49" column="32" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="49" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a34a5f2e7e3ffdfab547074adad9186b2" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string BiorthCyl::biorth</definition>
-        <argsstring></argsstring>
-        <name>biorth</name>
-        <qualifiedname>BiorthCyl::biorth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="46" column="24" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a44baa6ae5cdba330102cdb7c86ae5bec" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string BiorthCyl::cachename</definition>
-        <argsstring></argsstring>
-        <name>cachename</name>
-        <qualifiedname>BiorthCyl::cachename</qualifiedname>
-        <briefdescription>
-<para>Active cache file name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="86" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="86" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a45d513ecded05872b3aea7967d10468e" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::cmapR</definition>
-        <argsstring></argsstring>
-        <name>cmapR</name>
-        <qualifiedname>BiorthCyl::cmapR</qualifiedname>
-        <briefdescription>
-<para>Grid parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="55" column="7" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a8bcd18faef1104133ca2f8f6268ea9cb" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::cmapZ</definition>
-        <argsstring></argsstring>
-        <name>cmapZ</name>
-        <qualifiedname>BiorthCyl::cmapZ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="55" column="13" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1ac089d2198fd1f9f4654a79096a26e014" prot="protected" static="no" mutable="no">
-        <type>YAML::Node</type>
-        <definition>YAML::Node BiorthCyl::conf</definition>
-        <argsstring></argsstring>
-        <name>conf</name>
-        <qualifiedname>BiorthCyl::conf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="44" column="14" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a96cebab63fae2af6c6b73339b3a2125c" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt; &gt; BiorthCyl::dens</definition>
-        <argsstring></argsstring>
-        <name>dens</name>
-        <qualifiedname>BiorthCyl::dens</qualifiedname>
-        <briefdescription>
-<para>Storage for basis arrays. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="61" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="61" bodyend="-1"/>
-        <referencedby refid="class_biorth_cyl_1ade8874da65d774f577b573cc4355df5d" compoundref="_biorth_cyl_8_h" startline="143" endline="144">get_dens</referencedby>
-        <referencedby refid="class_biorth_cyl_1a8ad5380a103ef84f2aa8486058a3c54e" compoundref="_biorth_cyl_8_h" startline="159" endline="160">get_dens</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1ae6234b708479df10d2a9dea9dc715a06" prot="protected" static="no" mutable="no">
-        <type>YAML::Node</type>
-        <definition>YAML::Node BiorthCyl::diskconf</definition>
-        <argsstring></argsstring>
-        <name>diskconf</name>
-        <qualifiedname>BiorthCyl::diskconf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="44" column="19" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a9dcd1db3ae3046403e2b50adeb566a4c" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string BiorthCyl::disktype</definition>
-        <argsstring></argsstring>
-        <name>disktype</name>
-        <qualifiedname>BiorthCyl::disktype</qualifiedname>
-        <briefdescription>
-<para>Density target name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="83" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="83" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a5a2acdd3c357549301a4101c59070c4c" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::dx</definition>
-        <argsstring></argsstring>
-        <name>dx</name>
-        <qualifiedname>BiorthCyl::dx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="56" column="20" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="56" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a5ab6aafa721770cc9ed2523bcdb34b42" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::dy</definition>
-        <argsstring></argsstring>
-        <name>dy</name>
-        <qualifiedname>BiorthCyl::dy</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="57" column="20" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="57" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1aee255671efcbbad94d8738e1f0975f2f" prot="protected" static="no" mutable="no">
-        <type><ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref></type>
-        <definition>EmpCyl2d BiorthCyl::emp</definition>
-        <argsstring></argsstring>
-        <name>emp</name>
-        <qualifiedname>BiorthCyl::emp</qualifiedname>
-        <briefdescription>
-<para>The 2d basis instance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="64" column="12" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="64" bodyend="-1"/>
-        <referencedby refid="class_biorth_cyl_1a401d15299b43648f8792b6743b8f1435" compoundref="_biorth_cyl_8_h" startline="226" endline="226">getBiorthName</referencedby>
-        <referencedby refid="class_biorth_cyl_1abd8af7a03b4d60241e0a50e6de166c3e" compoundref="_biorth_cyl_8_h" startline="223" endline="223">getModelName</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a803516fe8cf864d5f6764356becb6903" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool BiorthCyl::EVEN_M</definition>
-        <argsstring></argsstring>
-        <name>EVEN_M</name>
-        <qualifiedname>BiorthCyl::EVEN_M</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="51" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="51" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1aa05151376b05d0d7c003cea8997cd0e5" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string BiorthCyl::forceID</definition>
-        <argsstring></argsstring>
-        <name>forceID</name>
-        <qualifiedname>BiorthCyl::forceID</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="46" column="31" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1ace09e742a4c210919faa7d54262c3523" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string BiorthCyl::geometry</definition>
-        <argsstring></argsstring>
-        <name>geometry</name>
-        <qualifiedname>BiorthCyl::geometry</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="46" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1af1c79d1eeaf93d606f1697a6ac128cce" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::knots</definition>
-        <argsstring></argsstring>
-        <name>knots</name>
-        <qualifiedname>BiorthCyl::knots</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="50" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a0083c5414adbd9a40a1e4ec7bc6ba563" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool BiorthCyl::logr</definition>
-        <argsstring></argsstring>
-        <name>logr</name>
-        <qualifiedname>BiorthCyl::logr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="51" column="23" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="51" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1ae862c7bac948cce0b5629c3e613da62b" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::mlim</definition>
-        <argsstring></argsstring>
-        <name>mlim</name>
-        <qualifiedname>BiorthCyl::mlim</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="35" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a650b1813c99a6c618a2d531559c51b14" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::mmax</definition>
-        <argsstring></argsstring>
-        <name>mmax</name>
-        <qualifiedname>BiorthCyl::mmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="7" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a24608b0500aebe57c851588d863a3579" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::mmin</definition>
-        <argsstring></argsstring>
-        <name>mmin</name>
-        <qualifiedname>BiorthCyl::mmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="30" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a60760a3deceea3ce27bf9c3b525991f7" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::Mouter</definition>
-        <argsstring></argsstring>
-        <name>Mouter</name>
-        <qualifiedname>BiorthCyl::Mouter</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="49" column="55" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="49" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a66af7a73b05c45681277ed32784bdc07" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::Ninner</definition>
-        <argsstring></argsstring>
-        <name>Ninner</name>
-        <qualifiedname>BiorthCyl::Ninner</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="49" column="48" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="49" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a54d0910b8f4f1af78fd8ba9e15422d7a" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::nlim</definition>
-        <argsstring></argsstring>
-        <name>nlim</name>
-        <qualifiedname>BiorthCyl::nlim</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="45" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a4de3be0df1007e9606d07d81084f0af9" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>BiorthCyl::nmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_biorth_cyl_1a282ca0afb31e4e0212d8207a02433ec6" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::nmaxfid</definition>
-        <argsstring></argsstring>
-        <name>nmaxfid</name>
-        <qualifiedname>BiorthCyl::nmaxfid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="22" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a7c06bf27ddd7bea714dc97b39ae30a26" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::nmin</definition>
-        <argsstring></argsstring>
-        <name>nmin</name>
-        <qualifiedname>BiorthCyl::nmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="40" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a5cbbe92413c5e83b7a9876c335e0b65b" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::NQDHT</definition>
-        <argsstring></argsstring>
-        <name>NQDHT</name>
-        <qualifiedname>BiorthCyl::NQDHT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="56" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a6f6719a3eafd7e38f0f681c5fc69e889" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::numr</definition>
-        <argsstring></argsstring>
-        <name>numr</name>
-        <qualifiedname>BiorthCyl::numr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="48" column="17" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a1da134719f15848a5368828ed2a4010b" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::numx</definition>
-        <argsstring></argsstring>
-        <name>numx</name>
-        <qualifiedname>BiorthCyl::numx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="55" column="19" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a76a3b8463759ffe95e421163180e3b9e" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int BiorthCyl::numy</definition>
-        <argsstring></argsstring>
-        <name>numy</name>
-        <qualifiedname>BiorthCyl::numy</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="55" column="24" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1abcd2f61a7ee380d466f89dde743b6f4e" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt; &gt; BiorthCyl::pot</definition>
-        <argsstring></argsstring>
-        <name>pot</name>
-        <qualifiedname>BiorthCyl::pot</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="61" column="20" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="61" bodyend="-1"/>
-        <referencedby refid="class_biorth_cyl_1a35e796e6e3a1e357cd8a12b7947a83c7" compoundref="_biorth_cyl_8_h" startline="139" endline="140">get_pot</referencedby>
-        <referencedby refid="class_biorth_cyl_1a14dfcfba83b0a0265a750c1e68706f64" compoundref="_biorth_cyl_8_h" startline="155" endline="156">get_pot</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1a38f6710abd8ec718f28424f51c375bb1" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::rcylmax</definition>
-        <argsstring></argsstring>
-        <name>rcylmax</name>
-        <qualifiedname>BiorthCyl::rcylmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="49" column="18" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="49" bodyend="-1"/>
-        <referencedby refid="class_biorth_cyl_1a19617628abb7c6644fc1520de479a0ac" compoundref="_biorth_cyl_8_h" startline="208" endline="208">getRtable</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_cyl_1aac4b72d16968c262c88a3f85754f9f6d" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::rcylmin</definition>
-        <argsstring></argsstring>
-        <name>rcylmin</name>
-        <qualifiedname>BiorthCyl::rcylmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="49" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="49" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_biorth_cyl_1a521bfa398f57797094b186629274fa29" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt; &gt; BiorthCyl::rforce</definition>
-        <argsstring></argsstring>
-        <name>rforce</name>
-        <qualifiedname>BiorthCyl::rforce</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="61" column="24" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="61" bodyend="-1"/>
-        <referencedby refid="class_biorth_cyl_1a86b7c35fcf9dc21aacd0ed66cad726e8" compoundref="_biorth_cyl_8_h" startline="147" endline="148">get_rforce</referencedby>
-        <referencedby refid="class_biorth_cyl_1a95144f6d7dead6f0447ffd33657e4f24" compoundref="_biorth_cyl_8_h" startline="163" endline="164">get_rforce</referencedby>
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-      <memberdef kind="variable" id="class_biorth_cyl_1ae0146a1a977323d814acf4c8e68dad2a" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>BiorthCyl::scale</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="49" column="26" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="49" bodyend="-1"/>
-        <referencedby refid="class_biorth_cyl_1a19617628abb7c6644fc1520de479a0ac" compoundref="_biorth_cyl_8_h" startline="208" endline="208">getRtable</referencedby>
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-      <memberdef kind="variable" id="class_biorth_cyl_1a5ed05b6ea3093320def209812da77b09" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool BiorthCyl::use_mpi</definition>
-        <argsstring></argsstring>
-        <name>use_mpi</name>
-        <qualifiedname>BiorthCyl::use_mpi</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="51" column="28" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="51" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_biorth_cyl_1a60173b649bc6160cf18c2ed0a0efff57" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool BiorthCyl::verbose</definition>
-        <argsstring></argsstring>
-        <name>verbose</name>
-        <qualifiedname>BiorthCyl::verbose</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="51" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="51" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_biorth_cyl_1a4aef543dcc8ee6b716699f7746456069" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::xmax</definition>
-        <argsstring></argsstring>
-        <name>xmax</name>
-        <qualifiedname>BiorthCyl::xmax</qualifiedname>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="56" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="56" bodyend="-1"/>
-        <referencedby refid="class_biorth_cyl_1ab7cfbcbf80ac26ac410adce91379e0cf" compoundref="_biorth_cyl_8_h" startline="215" endline="215">getXmax</referencedby>
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-      <memberdef kind="variable" id="class_biorth_cyl_1a912af2c7010998e5fec0b11044e45e82" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double BiorthCyl::xmin</definition>
-        <argsstring></argsstring>
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-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="56" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="56" bodyend="-1"/>
-        <referencedby refid="class_biorth_cyl_1a004f2f86e8d04f9892eaad6e61f0f743" compoundref="_biorth_cyl_8_h" startline="214" endline="214">getXmin</referencedby>
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-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="57" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="57" bodyend="-1"/>
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-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
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-        <name>Version</name>
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-<para>Cache versioning. </para>
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-        <referencedby refid="class_biorth_cyl_1a35e796e6e3a1e357cd8a12b7947a83c7" compoundref="_biorth_cyl_8_h" startline="139" endline="140">get_pot</referencedby>
-        <referencedby refid="class_biorth_cyl_1a14dfcfba83b0a0265a750c1e68706f64" compoundref="_biorth_cyl_8_h" startline="155" endline="156">get_pot</referencedby>
-        <referencedby refid="class_biorth_cyl_1a86b7c35fcf9dc21aacd0ed66cad726e8" compoundref="_biorth_cyl_8_h" startline="147" endline="148">get_rforce</referencedby>
-        <referencedby refid="class_biorth_cyl_1a95144f6d7dead6f0447ffd33657e4f24" compoundref="_biorth_cyl_8_h" startline="163" endline="164">get_rforce</referencedby>
-        <referencedby refid="class_biorth_cyl_1ac6a19141a850ae659ad4d71f3ab12729" compoundref="_biorth_cyl_8_h" startline="151" endline="152">get_zforce</referencedby>
-        <referencedby refid="class_biorth_cyl_1afc9af366fb5380fafa0eb079bcad86ac" compoundref="_biorth_cyl_8_h" startline="167" endline="168">get_zforce</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1acfee7fb9b005d053e925ccc46ffa8448" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void BiorthCyl::ReadH5Arrays</definition>
-        <argsstring>(HighFive::Group &amp;arrays)</argsstring>
-        <name>ReadH5Arrays</name>
-        <qualifiedname>BiorthCyl::ReadH5Arrays</qualifiedname>
-        <param>
-          <type>HighFive::Group &amp;</type>
-          <declname>arrays</declname>
-        </param>
-        <briefdescription>
-<para>Read the basis arrays. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="95" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a5b4b7246e7da3f662dd5ece7fa43af2a" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>bool</type>
-        <definition>virtual bool BiorthCyl::ReadH5Cache</definition>
-        <argsstring>()</argsstring>
-        <name>ReadH5Cache</name>
-        <qualifiedname>BiorthCyl::ReadH5Cache</qualifiedname>
-        <briefdescription>
-<para>Read the HDF5 cache. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="101" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1ac127da093fd81a35b0c694516f30d2bd" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void BiorthCyl::WriteH5Arrays</definition>
-        <argsstring>(HighFive::Group &amp;arrays)</argsstring>
-        <name>WriteH5Arrays</name>
-        <qualifiedname>BiorthCyl::WriteH5Arrays</qualifiedname>
-        <param>
-          <type>HighFive::Group &amp;</type>
-          <declname>arrays</declname>
-        </param>
-        <briefdescription>
-<para>Write the basis arrays. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="92" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a7ab179f5c9b8fd26fce5f2ba0f480b4b" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void BiorthCyl::WriteH5Cache</definition>
-        <argsstring>()</argsstring>
-        <name>WriteH5Cache</name>
-        <qualifiedname>BiorthCyl::WriteH5Cache</qualifiedname>
-        <briefdescription>
-<para>Write the HDF5 cache. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="98" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1abb4073ab54ea5c1a5ea4a36974b3bf73" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void BiorthCyl::WriteH5Params</definition>
-        <argsstring>(HighFive::File &amp;file)</argsstring>
-        <name>WriteH5Params</name>
-        <qualifiedname>BiorthCyl::WriteH5Params</qualifiedname>
-        <param>
-          <type>HighFive::File &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-<para>Write parameter attributes (needed for derived classes) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="89" column="16"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
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-        <type></type>
-        <definition>BiorthCyl::BiorthCyl</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>BiorthCyl</name>
-        <qualifiedname>BiorthCyl::BiorthCyl</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="112" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1aac560786d75e49db349fcaa37dc91aed" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::d_xi_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>d_xi_to_r</name>
-        <qualifiedname>BiorthCyl::d_xi_to_r</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Jacobian of nondimensional radial coordinate mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="127" column="10"/>
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-      <memberdef kind="function" id="class_biorth_cyl_1a42a4fe2ff63ca2b13f6ca0acd19aa18f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::d_yi_to_z</definition>
-        <argsstring>(double y)</argsstring>
-        <name>d_yi_to_z</name>
-        <qualifiedname>BiorthCyl::d_yi_to_z</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <briefdescription>
-<para>Jacobian of nondimensional vertical coordinate mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="136" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a4677b5f1217c54bdbe7c313da6aebfab" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void BiorthCyl::dump_basis</definition>
-        <argsstring>(const string &amp;name)</argsstring>
-        <name>dump_basis</name>
-        <qualifiedname>BiorthCyl::dump_basis</qualifiedname>
-        <param>
-          <type>const string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Dump the basis for plotting. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="220" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1ade8874da65d774f577b573cc4355df5d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::get_dens</definition>
-        <argsstring>(double x, double y, int m, int n)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>BiorthCyl::get_dens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Get density for dimensionless coord with harmonic order l and radial orer n <linebreak/>
- </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="143" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="143" bodyend="144"/>
-        <references refid="class_biorth_cyl_1a96cebab63fae2af6c6b73339b3a2125c" compoundref="_biorth_cyl_8_h" startline="61">dens</references>
-        <references refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7">interp</references>
-        <references refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79">xi_to_r</references>
-        <references refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf">yi_to_z</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a8ad5380a103ef84f2aa8486058a3c54e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void BiorthCyl::get_dens</definition>
-        <argsstring>(Eigen::MatrixXd &amp;d, double r, double z)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>BiorthCyl::get_dens</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Get density for dimensionless coord with harmonic order l and radial orer n <linebreak/>
- </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="159" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="159" bodyend="160"/>
-        <references refid="class_biorth_cyl_1a96cebab63fae2af6c6b73339b3a2125c" compoundref="_biorth_cyl_8_h" startline="61">dens</references>
-        <references refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7">interp</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a35e796e6e3a1e357cd8a12b7947a83c7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::get_pot</definition>
-        <argsstring>(double x, double y, int m, int n)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>BiorthCyl::get_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Get potential for dimensionless coord with harmonic order m and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="139" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="139" bodyend="140"/>
-        <references refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7">interp</references>
-        <references refid="class_biorth_cyl_1abcd2f61a7ee380d466f89dde743b6f4e" compoundref="_biorth_cyl_8_h" startline="61">pot</references>
-        <references refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79">xi_to_r</references>
-        <references refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf">yi_to_z</references>
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-      <memberdef kind="function" id="class_biorth_cyl_1a14dfcfba83b0a0265a750c1e68706f64" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void BiorthCyl::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;p, double r, double z)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>BiorthCyl::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Get potential for dimensionless coord with harmonic order m and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="155" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="155" bodyend="156"/>
-        <references refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7">interp</references>
-        <references refid="class_biorth_cyl_1abcd2f61a7ee380d466f89dde743b6f4e" compoundref="_biorth_cyl_8_h" startline="61">pot</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a999e4c4083325b3290e0271769834f07" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void BiorthCyl::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;Vc, Eigen::MatrixXd &amp;Vs, double r, double z)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>BiorthCyl::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>Vc</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>Vs</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate all orders in matrices; for n-body. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="205" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a86b7c35fcf9dc21aacd0ed66cad726e8" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::get_rforce</definition>
-        <argsstring>(double x, double y, int m, int n)</argsstring>
-        <name>get_rforce</name>
-        <qualifiedname>BiorthCyl::get_rforce</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Get radial force for dimensionless coord with harmonic order l and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="147" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="147" bodyend="148"/>
-        <references refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7">interp</references>
-        <references refid="class_biorth_cyl_1a521bfa398f57797094b186629274fa29" compoundref="_biorth_cyl_8_h" startline="61">rforce</references>
-        <references refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79">xi_to_r</references>
-        <references refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf">yi_to_z</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a95144f6d7dead6f0447ffd33657e4f24" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void BiorthCyl::get_rforce</definition>
-        <argsstring>(Eigen::MatrixXd &amp;f, double r, double z)</argsstring>
-        <name>get_rforce</name>
-        <qualifiedname>BiorthCyl::get_rforce</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>f</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Get radial force for dimensionless coord with harmonic order l and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="163" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="163" bodyend="164"/>
-        <references refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7">interp</references>
-        <references refid="class_biorth_cyl_1a521bfa398f57797094b186629274fa29" compoundref="_biorth_cyl_8_h" startline="61">rforce</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1ac6a19141a850ae659ad4d71f3ab12729" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::get_zforce</definition>
-        <argsstring>(double x, double y, int m, int n)</argsstring>
-        <name>get_zforce</name>
-        <qualifiedname>BiorthCyl::get_zforce</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Get radial force for dimensionless coord with harmonic order l and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="151" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="151" bodyend="152"/>
-        <references refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7">interp</references>
-        <references refid="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79">xi_to_r</references>
-        <references refid="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf">yi_to_z</references>
-        <references refid="class_biorth_cyl_1ad8a3d9aa128eee24615c9d5013d96492" compoundref="_biorth_cyl_8_h" startline="61">zforce</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1afc9af366fb5380fafa0eb079bcad86ac" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void BiorthCyl::get_zforce</definition>
-        <argsstring>(Eigen::MatrixXd &amp;f, double r, double z)</argsstring>
-        <name>get_zforce</name>
-        <qualifiedname>BiorthCyl::get_zforce</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>f</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Get radial force for dimensionless coord with harmonic order l and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="167" column="8" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="167" bodyend="168"/>
-        <references refid="class_biorth_cyl_1a0f2e198aa99753b358ddd21fe15f6da7">interp</references>
-        <references refid="class_biorth_cyl_1ad8a3d9aa128eee24615c9d5013d96492" compoundref="_biorth_cyl_8_h" startline="61">zforce</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a401d15299b43648f8792b6743b8f1435" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>const std::string</type>
-        <definition>const std::string BiorthCyl::getBiorthName</definition>
-        <argsstring>()</argsstring>
-        <name>getBiorthName</name>
-        <qualifiedname>BiorthCyl::getBiorthName</qualifiedname>
-        <briefdescription>
-<para>Get biorthogonal function base name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="226" column="21" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="226" bodyend="226"/>
-        <references refid="class_biorth_cyl_1aee255671efcbbad94d8738e1f0975f2f" compoundref="_biorth_cyl_8_h" startline="64">emp</references>
-        <references refid="class_emp_cyl2d_1ac3e08ffeb77e92616a2cfa1cf748f3e2" compoundref="_emp_cyl2d_8_h" startline="503" endline="503">EmpCyl2d::getBiorthName</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1abd8af7a03b4d60241e0a50e6de166c3e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>const std::string</type>
-        <definition>const std::string BiorthCyl::getModelName</definition>
-        <argsstring>()</argsstring>
-        <name>getModelName</name>
-        <qualifiedname>BiorthCyl::getModelName</qualifiedname>
-        <briefdescription>
-<para>Get model name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="223" column="21" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="223" bodyend="223"/>
-        <references refid="class_biorth_cyl_1aee255671efcbbad94d8738e1f0975f2f" compoundref="_biorth_cyl_8_h" startline="64">emp</references>
-        <references refid="class_emp_cyl2d_1ab6732d5c1869669061e583214a93bb2a" compoundref="_emp_cyl2d_8_h" startline="500" endline="500">EmpCyl2d::getModelName</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a19617628abb7c6644fc1520de479a0ac" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::getRtable</definition>
-        <argsstring>()</argsstring>
-        <name>getRtable</name>
-        <qualifiedname>BiorthCyl::getRtable</qualifiedname>
-        <briefdescription>
-<para>Get the table bounds. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="208" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="208" bodyend="208"/>
-        <references refid="class_biorth_cyl_1a38f6710abd8ec718f28424f51c375bb1" compoundref="_biorth_cyl_8_h" startline="49">rcylmax</references>
-        <references refid="class_biorth_cyl_1ae0146a1a977323d814acf4c8e68dad2a" compoundref="_biorth_cyl_8_h" startline="49">scale</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1ab7cfbcbf80ac26ac410adce91379e0cf" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::getXmax</definition>
-        <argsstring>()</argsstring>
-        <name>getXmax</name>
-        <qualifiedname>BiorthCyl::getXmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="215" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="215" bodyend="215"/>
-        <references refid="class_biorth_cyl_1a4aef543dcc8ee6b716699f7746456069" compoundref="_biorth_cyl_8_h" startline="56">xmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a004f2f86e8d04f9892eaad6e61f0f743" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::getXmin</definition>
-        <argsstring>()</argsstring>
-        <name>getXmin</name>
-        <qualifiedname>BiorthCyl::getXmin</qualifiedname>
-        <briefdescription>
-<para>Get table range bounds. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="214" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="214" bodyend="214"/>
-        <references refid="class_biorth_cyl_1a912af2c7010998e5fec0b11044e45e82" compoundref="_biorth_cyl_8_h" startline="56">xmin</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1aa1dd16cc8bc87f32247b779f5a0eefe5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::getYmax</definition>
-        <argsstring>()</argsstring>
-        <name>getYmax</name>
-        <qualifiedname>BiorthCyl::getYmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="217" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="217" bodyend="217"/>
-        <references refid="class_biorth_cyl_1a1d9f07ce70266f53815eb84a2da08f4c" compoundref="_biorth_cyl_8_h" startline="57">ymax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a402566b4b625aa2148a175394f6995de" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::getYmin</definition>
-        <argsstring>()</argsstring>
-        <name>getYmin</name>
-        <qualifiedname>BiorthCyl::getYmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="216" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="216" bodyend="216"/>
-        <references refid="class_biorth_cyl_1a1a45f0f5b63582372621b73186e8eff3" compoundref="_biorth_cyl_8_h" startline="57">ymin</references>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1af7eeb15104ff56e7e4e12b0cc3e794d2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt; Eigen::MatrixXd &gt; BiorthCyl::orthoCheck</definition>
-        <argsstring>()</argsstring>
-        <name>orthoCheck</name>
-        <qualifiedname>BiorthCyl::orthoCheck</qualifiedname>
-        <briefdescription>
-<para>For pyEXP. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="211" column="15"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1afd8ebd9624523fe9a61aaed0aba1f75a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::r_to_xi</definition>
-        <argsstring>(double r)</argsstring>
-        <name>r_to_xi</name>
-        <qualifiedname>BiorthCyl::r_to_xi</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Map radial coordinate to nondimensional coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="121" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a6b01b4a9aa55143c6e0d9ef61b24af79" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::xi_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>xi_to_r</name>
-        <qualifiedname>BiorthCyl::xi_to_r</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Map nondimensional coordinate to radial coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="124" column="10"/>
-        <referencedby refid="class_biorth_cyl_1ade8874da65d774f577b573cc4355df5d" compoundref="_biorth_cyl_8_h" startline="143" endline="144">get_dens</referencedby>
-        <referencedby refid="class_biorth_cyl_1a35e796e6e3a1e357cd8a12b7947a83c7" compoundref="_biorth_cyl_8_h" startline="139" endline="140">get_pot</referencedby>
-        <referencedby refid="class_biorth_cyl_1a86b7c35fcf9dc21aacd0ed66cad726e8" compoundref="_biorth_cyl_8_h" startline="147" endline="148">get_rforce</referencedby>
-        <referencedby refid="class_biorth_cyl_1ac6a19141a850ae659ad4d71f3ab12729" compoundref="_biorth_cyl_8_h" startline="151" endline="152">get_zforce</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a3b7b1cbdf9078bc79b4c76cf7f8511cf" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::yi_to_z</definition>
-        <argsstring>(double y)</argsstring>
-        <name>yi_to_z</name>
-        <qualifiedname>BiorthCyl::yi_to_z</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <briefdescription>
-<para>Map of nondimensional coordinate to vertical coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="133" column="10"/>
-        <referencedby refid="class_biorth_cyl_1ade8874da65d774f577b573cc4355df5d" compoundref="_biorth_cyl_8_h" startline="143" endline="144">get_dens</referencedby>
-        <referencedby refid="class_biorth_cyl_1a35e796e6e3a1e357cd8a12b7947a83c7" compoundref="_biorth_cyl_8_h" startline="139" endline="140">get_pot</referencedby>
-        <referencedby refid="class_biorth_cyl_1a86b7c35fcf9dc21aacd0ed66cad726e8" compoundref="_biorth_cyl_8_h" startline="147" endline="148">get_rforce</referencedby>
-        <referencedby refid="class_biorth_cyl_1ac6a19141a850ae659ad4d71f3ab12729" compoundref="_biorth_cyl_8_h" startline="151" endline="152">get_zforce</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a55aea348e6abf15adda65efbebb3576d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double BiorthCyl::z_to_yi</definition>
-        <argsstring>(double z)</argsstring>
-        <name>z_to_yi</name>
-        <qualifiedname>BiorthCyl::z_to_yi</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Map of vertical coordinate to nondimesional coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="130" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a733a6da0740ab880873d662e9343d9ba" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual BiorthCyl::~BiorthCyl</definition>
-        <argsstring>()</argsstring>
-        <name>~BiorthCyl</name>
-        <qualifiedname>BiorthCyl::~BiorthCyl</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="115" column="11" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="115" bodyend="115"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-func">
-      <memberdef kind="function" id="class_biorth_cyl_1abcbbb2fb9d65cc063654f62d5e87b1dd" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::map&lt; std::string, std::string &gt;</type>
-        <definition>static std::map&lt; std::string, std::string &gt; BiorthCyl::cacheInfo</definition>
-        <argsstring>(const std::string &amp;cachefile, bool verbose=true)</argsstring>
-        <name>cacheInfo</name>
-        <qualifiedname>BiorthCyl::cacheInfo</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>cachefile</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>true</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Read and print the cache and return the header parameters as a map/dictionary </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="173" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_biorth_cyl_1a645908abab2d6a3d7e0b961c927e05ab" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>YAML::Node</type>
-        <definition>static YAML::Node BiorthCyl::getHeader</definition>
-        <argsstring>(const std::string &amp;cachefile)</argsstring>
-        <name>getHeader</name>
-        <qualifiedname>BiorthCyl::getHeader</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>cachefile</declname>
-        </param>
-        <briefdescription>
-<para>Read the cache and report parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="118" column="21"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>! <ref refid="class_biorth_cyl" kindref="compound">BiorthCyl</ref> grid class </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="1">
-        <label>BiorthCyl</label>
-        <link refid="class_biorth_cyl"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>emp</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>EmpCyl2d</label>
-        <link refid="class_emp_cyl2d"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>map</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>EmpCyl2d::Mapping</label>
-        <link refid="class_emp_cyl2d_1_1_mapping"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/BiorthCyl.H" line="39" column="1" bodyfile="/home/weinberg/Projects/EXP/include/BiorthCyl.H" bodystart="40" bodyend="227"/>
-    <listofallmembers>
-      <member refid="class_biorth_cyl_1ab2a9bf64da5f28cf553a561db3c0c66b" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>acylcut</name></member>
-      <member refid="class_biorth_cyl_1ace0f4244f1ab8c83cb266cea3a82610f" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>acyltbl</name></member>
-      <member refid="class_biorth_cyl_1a34a5f2e7e3ffdfab547074adad9186b2" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>biorth</name></member>
-      <member refid="class_biorth_cyl_1a42c9ce41838d5591b234b84f579c8d8d" prot="public" virt="non-virtual"><scope>BiorthCyl</scope><name>BiorthCyl</name></member>
-      <member refid="class_biorth_cyl_1abcbbb2fb9d65cc063654f62d5e87b1dd" prot="public" virt="non-virtual"><scope>BiorthCyl</scope><name>cacheInfo</name></member>
-      <member refid="class_biorth_cyl_1a44baa6ae5cdba330102cdb7c86ae5bec" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>cachename</name></member>
-      <member refid="class_biorth_cyl_1a45d513ecded05872b3aea7967d10468e" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>cmapR</name></member>
-      <member refid="class_biorth_cyl_1a8bcd18faef1104133ca2f8f6268ea9cb" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>cmapZ</name></member>
-      <member refid="class_biorth_cyl_1ac089d2198fd1f9f4654a79096a26e014" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>conf</name></member>
-      <member refid="class_biorth_cyl_1a4eb129617431c65667af5d9fe8c4b8f4" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>create_tables</name></member>
-      <member refid="class_biorth_cyl_1aac560786d75e49db349fcaa37dc91aed" prot="public" virt="non-virtual"><scope>BiorthCyl</scope><name>d_xi_to_r</name></member>
-      <member refid="class_biorth_cyl_1a42a4fe2ff63ca2b13f6ca0acd19aa18f" prot="public" virt="non-virtual"><scope>BiorthCyl</scope><name>d_yi_to_z</name></member>
-      <member refid="class_biorth_cyl_1a96cebab63fae2af6c6b73339b3a2125c" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>dens</name></member>
-      <member refid="class_biorth_cyl_1ae6234b708479df10d2a9dea9dc715a06" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>diskconf</name></member>
-      <member refid="class_biorth_cyl_1a9dcd1db3ae3046403e2b50adeb566a4c" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>disktype</name></member>
-      <member refid="class_biorth_cyl_1a4677b5f1217c54bdbe7c313da6aebfab" prot="public" virt="non-virtual"><scope>BiorthCyl</scope><name>dump_basis</name></member>
-      <member refid="class_biorth_cyl_1a5a2acdd3c357549301a4101c59070c4c" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>dx</name></member>
-      <member refid="class_biorth_cyl_1a5ab6aafa721770cc9ed2523bcdb34b42" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>dy</name></member>
-      <member refid="class_biorth_cyl_1aee255671efcbbad94d8738e1f0975f2f" prot="protected" virt="non-virtual"><scope>BiorthCyl</scope><name>emp</name></member>
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diff --git a/doxyxml/class_biorth_grid.xml b/doxyxml/class_biorth_grid.xml
deleted file mode 100644
index 9c0788a..0000000
--- a/doxyxml/class_biorth_grid.xml
+++ /dev/null
@@ -1,730 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_biorth_grid" kind="class" language="C++" prot="public">
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-      </node>
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-        <link refid="class_biorth_grid"/>
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-    <collaborationgraph>
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-      <node id="3">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
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-      <node id="1">
-        <label>BiorthGrid</label>
-        <link refid="class_biorth_grid"/>
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-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/biorth.H" line="84" column="1" bodyfile="/home/weinberg/Projects/EXP/include/biorth.H" bodystart="85" bodyend="149"/>
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diff --git a/doxyxml/class_biorth_wake.xml b/doxyxml/class_biorth_wake.xml
deleted file mode 100644
index ea0e863..0000000
--- a/doxyxml/class_biorth_wake.xml
+++ /dev/null
@@ -1,1032 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_biorth_wake" kind="class" language="C++" prot="public">
-    <compoundname>BiorthWake</compoundname>
-    <includes refid="biorth__wake_8_h" local="no">biorth_wake.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_biorth_wake_1a918a339d53b3129001f1e9ef55cec03f" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; double &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;double&gt; &gt; BiorthWake::ambp</definition>
-        <argsstring></argsstring>
-        <name>ambp</name>
-        <qualifiedname>BiorthWake::ambp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="51" column="15" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="51" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_wake_1a9dcaf70ce76acceba188a9d4cea64ab7" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; BiorthWake::amby</definition>
-        <argsstring></argsstring>
-        <name>amby</name>
-        <qualifiedname>BiorthWake::amby</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="50" column="31" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="50" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_biorth_wake_1a3d122ae4cd8d8465387df760aa8f1dd7" prot="private" static="no" mutable="no">
-        <type><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref> *</type>
-        <definition>AxiSymBiorth* BiorthWake::bio</definition>
-        <argsstring></argsstring>
-        <name>bio</name>
-        <qualifiedname>BiorthWake::bio</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="17" column="16" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="17" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool BiorthWake::coefs_defined</definition>
-        <argsstring></argsstring>
-        <name>coefs_defined</name>
-        <qualifiedname>BiorthWake::coefs_defined</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="24" column="8" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="24" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_biorth_wake_1aace083657da48c081b9ac18f8079a3de" prot="private" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd BiorthWake::expcoef</definition>
-        <argsstring></argsstring>
-        <name>expcoef</name>
-        <qualifiedname>BiorthWake::expcoef</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="26" column="19" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="26" bodyend="-1"/>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd BiorthWake::factorial</definition>
-        <argsstring></argsstring>
-        <name>factorial</name>
-        <qualifiedname>BiorthWake::factorial</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="25" column="19" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="25" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_biorth_wake_1aa010d45b49ace3cca6d3778993596cbb" prot="private" static="no" mutable="no">
-        <type>std::complex&lt; double &gt;</type>
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-        <argsstring></argsstring>
-        <name>I</name>
-        <qualifiedname>BiorthWake::I</qualifiedname>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="47" column="16" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="47" bodyend="-1"/>
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-        <name>init_orientation</name>
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-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="53" column="7" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="53" bodyend="-1"/>
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-        <name>ll</name>
-        <qualifiedname>BiorthWake::ll</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <definition>int BiorthWake::lmax</definition>
-        <argsstring></argsstring>
-        <name>lmax</name>
-        <qualifiedname>BiorthWake::lmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="18" column="7" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="18" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int BiorthWake::mm</definition>
-        <argsstring></argsstring>
-        <name>mm</name>
-        <qualifiedname>BiorthWake::mm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/biorth_wake.H" line="53" column="15" bodyfile="/home/weinberg/Projects/EXP/include/biorth_wake.H" bodystart="53" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int BiorthWake::nfunk</definition>
-        <argsstring></argsstring>
-        <name>nfunk</name>
-        <qualifiedname>BiorthWake::nfunk</qualifiedname>
-        <briefdescription>
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diff --git a/doxyxml/class_c_b_disk.xml b/doxyxml/class_c_b_disk.xml
deleted file mode 100644
index 8079069..0000000
--- a/doxyxml/class_c_b_disk.xml
+++ /dev/null
@@ -1,1742 +0,0 @@
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-  <compounddef id="class_c_b_disk" kind="class" language="C++" prot="public">
-    <compoundname>CBDisk</compoundname>
-    <basecompoundref refid="class_axi_sym_biorth" prot="public" virt="non-virtual">AxiSymBiorth</basecompoundref>
-    <basecompoundref refid="class_polar_basis" prot="public" virt="non-virtual">PolarBasis</basecompoundref>
-    <includes refid="biorth2d_8_h" local="no">biorth2d.H</includes>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_c_b_disk_1ad6fae3c7216a87ed78b3136f84a086df" prot="private" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_emp_cyl2d_1_1_model_cyl" kindref="compound">EmpCyl2d::ModelCyl</ref> &gt;</type>
-        <definition>using CBDisk::Disk2d =  std::shared_ptr&lt;EmpCyl2d::ModelCyl&gt;</definition>
-        <argsstring></argsstring>
-        <name>Disk2d</name>
-        <qualifiedname>CBDisk::Disk2d</qualifiedname>
-        <briefdescription>
-<para>Background instance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="55" column="3" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_c_b_disk_1a97020694d9624829ad91cf26a9c27c10" prot="private" static="no" mutable="no">
-        <type><ref refid="class_c_b_disk_1ad6fae3c7216a87ed78b3136f84a086df" kindref="member">Disk2d</ref></type>
-        <definition>Disk2d CBDisk::disk</definition>
-        <argsstring></argsstring>
-        <name>disk</name>
-        <qualifiedname>CBDisk::disk</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="56" column="10" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="56" bodyend="-1"/>
-        <referencedby refid="class_c_b_disk_1a82d0b59e367b9d8f65feea21bcc2b921" compoundref="_c_b_disk_8_h" startline="63" endline="64">background</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_c_b_disk_1aadcf6024f36d833aafb2e686721838e4" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double CBDisk::fac1</definition>
-        <argsstring></argsstring>
-        <name>fac1</name>
-        <qualifiedname>CBDisk::fac1</qualifiedname>
-        <briefdescription>
-<para>Potential, force, and density scale factors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="79" column="10" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="79" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_c_b_disk_1a167b975c504a681ad42b1d22bc6afdea" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double CBDisk::fac2</definition>
-        <argsstring></argsstring>
-        <name>fac2</name>
-        <qualifiedname>CBDisk::fac2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="79" column="15" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="79" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_c_b_disk_1aa8389927c542546ee53c7bfd3574358e" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int CBDisk::mmax</definition>
-        <argsstring></argsstring>
-        <name>mmax</name>
-        <qualifiedname>CBDisk::mmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="74" column="10" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="74" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_c_b_disk_1a6f6130e732af6f8f04f037410e40c7be" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string CBDisk::model</definition>
-        <argsstring></argsstring>
-        <name>model</name>
-        <qualifiedname>CBDisk::model</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="75" column="10" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="75" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_c_b_disk_1a5e62923bdfde1d582f2daf2484fc7de4" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int CBDisk::numz</definition>
-        <argsstring></argsstring>
-        <name>numz</name>
-        <qualifiedname>CBDisk::numz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="17" column="7" bodyfile="/home/weinberg/Projects/EXP/include/biorth2d.H" bodystart="17" bodyend="-1"/>
-        <referencedby refid="class_c_b_disk_1a1160213d2f102a628b7d0ffbd1923279" compoundref="biorth2d_8_h" startline="42" endline="42">set_numz</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_c_b_disk_1aef83f6932f0df78fc6b0d0cb8451ce34" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double CBDisk::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>CBDisk::scale</qualifiedname>
-        <briefdescription>
-<para>Parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="73" column="10" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="73" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_c_b_disk_1a57cf9d7bca64b85f40646eb0801ccfb8" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; CBDisk::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>CBDisk::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="82" column="25" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="82" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_c_b_disk_1a82d0b59e367b9d8f65feea21bcc2b921" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>std::tuple&lt; double, double, double &gt;</type>
-        <definition>virtual std::tuple&lt; double, double, double &gt; CBDisk::background</definition>
-        <argsstring>(double r, double z)</argsstring>
-        <name>background</name>
-        <qualifiedname>CBDisk::background</qualifiedname>
-        <reimplements refid="class_polar_basis_1a89ded72802c057e9900f24d493f9dce3">background</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Background evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="63" column="3" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="63" bodyend="64"/>
-        <references refid="class_c_b_disk_1a97020694d9624829ad91cf26a9c27c10" compoundref="_c_b_disk_8_h" startline="56">disk</references>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a8ec5eef80339b61d0cb1920b1ed2a953" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void CBDisk::dens</definition>
-        <argsstring>(const int m, const double r, Eigen::VectorXd &amp;a)</argsstring>
-        <name>dens</name>
-        <qualifiedname>CBDisk::dens</qualifiedname>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>a</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="38" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::dens</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>dens</name>
-        <qualifiedname>CBDisk::dens</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1a6cb90b729dbfb31340bf8930049df4cd">dens</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="33" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a1c28a9b686f7bce1eb228dbbcc80ee82" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double CBDisk::dphi</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>dphi</name>
-        <qualifiedname>CBDisk::dphi</qualifiedname>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="29" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a0dc111984ae02c521feaaba4ac098d17" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double CBDisk::dpot</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>dpot</name>
-        <qualifiedname>CBDisk::dpot</qualifiedname>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="32" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1aee6e15ba0b5c67150d23e0dc720fa2b3" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void CBDisk::get_dens</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>CBDisk::get_dens</qualifiedname>
-        <reimplements refid="class_polar_basis_1a7e4f51d9a6cb765a29e4a90c6020b3fe">get_dens</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="66" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a38663aa86ab5a642b78a2ab929584181" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void CBDisk::get_dpotl</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dpr, Eigen::MatrixXd &amp;dpz, int tid)</argsstring>
-        <name>get_dpotl</name>
-        <qualifiedname>CBDisk::get_dpotl</qualifiedname>
-        <reimplements refid="class_polar_basis_1a35dcc79a47abe1c6de84dbdb9203896d">get_dpotl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpr</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpz</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dpr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dpz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="49" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a8ac1e7c2a2efee6990cc31ca6c53f9a1" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void CBDisk::get_potl</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>CBDisk::get_potl</qualifiedname>
-        <reimplements refid="class_polar_basis_1a5bd90a17ffb1b1f7e06fdb9a9861b9e9">get_potl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="52" column="8"/>
-        <referencedby refid="class_c_b_disk_1a14ea57104484741b6934b807e1505e3d" compoundref="_c_b_disk_8_h" startline="87" endline="91">get_pot</referencedby>
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-        <type>void</type>
-        <definition>void CBDisk::get_potl_dens</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;d, int tid)</argsstring>
-        <name>get_potl_dens</name>
-        <qualifiedname>CBDisk::get_potl_dens</qualifiedname>
-        <reimplements refid="class_polar_basis_1ae897c7f6610ad01ab9c69d47e836d3dd">get_potl_dens</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get the potential and density <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="68" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1ada5af15d64a58e2ad1125b21b518704e" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double CBDisk::getRtable</definition>
-        <argsstring>()</argsstring>
-        <name>getRtable</name>
-        <qualifiedname>CBDisk::getRtable</qualifiedname>
-        <reimplements refid="class_polar_basis_1adfeabbff17849499d42172409cde90ee">getRtable</reimplements>
-        <briefdescription>
-<para>Required maximum table radious (no limit here) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="42" column="18" bodyfile="/home/weinberg/Projects/EXP/src/CBDisk.H" bodystart="42" bodyend="42"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a5ad6907893c4b46cf8a74737a70e02fa" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void CBDisk::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>CBDisk::initialize</qualifiedname>
-        <reimplements refid="class_polar_basis_1a5b49aa8ebe308a9f089b52478ee4db11">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Initialize method. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="47" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a20a66684834ce4eb9ecf61e3d2eebf28" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::norm</definition>
-        <argsstring>(const int n, const int m)</argsstring>
-        <name>norm</name>
-        <qualifiedname>CBDisk::norm</qualifiedname>
-        <reimplements refid="class_biorth_1a4997a44fb308362868547f4eb0f23c5a">norm</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="35" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a484cfcfb7e36a4e40f6431f82f804b91" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void CBDisk::orthoCheck</definition>
-        <argsstring>()</argsstring>
-        <name>orthoCheck</name>
-        <qualifiedname>CBDisk::orthoCheck</qualifiedname>
-        <briefdescription>
-<para>Sanity check. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="45" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1ae0ed415245ad56ca9857fc9f8f663eac" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double CBDisk::phif</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>phif</name>
-        <qualifiedname>CBDisk::phif</qualifiedname>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="18" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1ae0ed415245ad56ca9857fc9f8f663eac" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double CBDisk::phif</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>phif</name>
-        <qualifiedname>CBDisk::phif</qualifiedname>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>2D Clutton-Brock basis </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="28" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a29764ab0d1b593b26a434acc8b4ec22d" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void CBDisk::potl</definition>
-        <argsstring>(const int m, const double r, Eigen::VectorXd &amp;a)</argsstring>
-        <name>potl</name>
-        <qualifiedname>CBDisk::potl</qualifiedname>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>a</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="37" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::potl</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>potl</name>
-        <qualifiedname>CBDisk::potl</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1aaec9137305d7c2eed46ca59c5ea777b1">potl</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="31" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a7f73fae41c4d8333c30d49d78814f40f" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void CBDisk::setBackground</definition>
-        <argsstring>()</argsstring>
-        <name>setBackground</name>
-        <qualifiedname>CBDisk::setBackground</qualifiedname>
-        <briefdescription>
-<para>Set background from YAML. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="59" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_c_b_disk_1a993c3b530847f8253621c92ee6f8b68a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>CBDisk::CBDisk</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf, MixtureBasis *m=0)</argsstring>
-        <name>CBDisk</name>
-        <qualifiedname>CBDisk::CBDisk</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <param>
-          <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-          <declname>m</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (<ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>conf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>passes any parameters to basis instance </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>scale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radius for coordinate scaling </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CBDisk.H" line="100" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a44ba475f7449a1b4890c48b6cf434f93" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>CBDisk::CBDisk</definition>
-        <argsstring>(void)</argsstring>
-        <name>CBDisk</name>
-        <qualifiedname>CBDisk::CBDisk</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="22" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a9c18f2ff0bb31ab91e09fed0d3a164b3" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::d_r_to_rb</definition>
-        <argsstring>(double const r)</argsstring>
-        <name>d_r_to_rb</name>
-        <qualifiedname>CBDisk::d_r_to_rb</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1aaaf67379cdeb608b5f9c07509bb22631">d_r_to_rb</reimplements>
-        <param>
-          <type>double const</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="46" column="10" bodyfile="/home/weinberg/Projects/EXP/include/biorth2d.H" bodystart="46" bodyend="46"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::dens</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>dens</name>
-        <qualifiedname>CBDisk::dens</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1a6cb90b729dbfb31340bf8930049df4cd">dens</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="27" column="10"/>
-        <referencedby refid="class_c_b_disk_1a1b27ba7f86b77c8480404201ad31be5e" compoundref="biorth2d_8_h" startline="38" endline="39">densR</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a7367cfa5968af0036f19681c640f64bb" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void CBDisk::dens</definition>
-        <argsstring>(const int n, const int m, const double r, Eigen::VectorXd &amp;a)</argsstring>
-        <name>dens</name>
-        <qualifiedname>CBDisk::dens</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1a6222c8a860d4e41a3d81b74d790442c8">dens</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>a</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="31" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a1b27ba7f86b77c8480404201ad31be5e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double CBDisk::densR</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>densR</name>
-        <qualifiedname>CBDisk::densR</qualifiedname>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="38" column="17" bodyfile="/home/weinberg/Projects/EXP/include/biorth2d.H" bodystart="38" bodyend="39"/>
-        <references refid="class_c_b_disk_1a3e080da0f86efef7dffa9d81854eaed4">dens</references>
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-      <memberdef kind="function" id="class_c_b_disk_1a0f1296ba29fdfedbd51b4331820c514a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::krnl</definition>
-        <argsstring>(const int n, const int m)</argsstring>
-        <name>krnl</name>
-        <qualifiedname>CBDisk::krnl</qualifiedname>
-        <reimplements refid="class_biorth_1a582200336065fac43a3282ee0671cffb">krnl</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="28" column="17" bodyfile="/home/weinberg/Projects/EXP/include/biorth2d.H" bodystart="28" bodyend="28"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a20a66684834ce4eb9ecf61e3d2eebf28" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::norm</definition>
-        <argsstring>(const int n, const int m)</argsstring>
-        <name>norm</name>
-        <qualifiedname>CBDisk::norm</qualifiedname>
-        <reimplements refid="class_biorth_1a4997a44fb308362868547f4eb0f23c5a">norm</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="29" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::potl</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>potl</name>
-        <qualifiedname>CBDisk::potl</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1aaec9137305d7c2eed46ca59c5ea777b1">potl</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="26" column="10"/>
-        <referencedby refid="class_c_b_disk_1abfe35d6748b8413206eecca684657510" compoundref="biorth2d_8_h" startline="36" endline="37">potlR</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_c_b_disk_1a679f542434214c22c85d47178e0fdd12" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void CBDisk::potl</definition>
-        <argsstring>(const int n, const int m, const double r, Eigen::VectorXd &amp;a)</argsstring>
-        <name>potl</name>
-        <qualifiedname>CBDisk::potl</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1a2216fefb9a71a8dcdd378da8c3d82fbb">potl</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>a</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="30" column="8"/>
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-      <memberdef kind="function" id="class_c_b_disk_1abfe35d6748b8413206eecca684657510" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CBDisk::potlR</definition>
-        <argsstring>(const int n, const int m, const double r)</argsstring>
-        <name>potlR</name>
-        <qualifiedname>CBDisk::potlR</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1a63c2bf04065efbbdcb005377836e0894">potlR</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth2d.H" line="36" column="17" bodyfile="/home/weinberg/Projects/EXP/include/biorth2d.H" bodystart="36" bodyend="37"/>
-        <references refid="class_c_b_disk_1ad86384f193c49f257cedc5344df6c2ae">potl</references>
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-        </param>
-        <param>
-          <type>const int</type>
-          <declname>m</declname>
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-        <param>
-          <type>const double</type>
-          <declname>r</declname>
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-        <param>
-          <type>const double</type>
-          <declname>z</declname>
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-        <type>double</type>
-        <definition>double CBDisk::r_to_rb</definition>
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-        <name>r_to_rb</name>
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-        <reimplements refid="class_axi_sym_biorth_1a5fea78e59e755b9d3e05965b223f10aa">r_to_rb</reimplements>
-        <param>
-          <type>double const</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <type>double</type>
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-        <qualifiedname>CBDisk::rb_max</qualifiedname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <name>rb_min</name>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
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-          <type>int</type>
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-        <name>get_pot</name>
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-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
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-<para>Clutton-Brock potential. </para>
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-<para>Reference implemenation of the Clutton-Brock disk basis</para>
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-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum azimuthal order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Lmax</parametername>
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-<parameterdescription>
-<para>alias for mmax</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Mmax</parametername>
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-<parameterdescription>
-<para>alias for mmax</para>
-</parameterdescription>
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-<parameteritem>
-<parameternamelist>
-<parametername>scale</parametername>
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-<parameterdescription>
-<para>radius for coordinate scaling. By default, the core radius of the Clutton-Brock density is 1. </para>
-</parameterdescription>
-</parameteritem>
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-          <edgelabel>time_so_far</edgelabel>
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-      <node id="11">
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diff --git a/doxyxml/class_c_b_sphere.xml b/doxyxml/class_c_b_sphere.xml
deleted file mode 100644
index f094009..0000000
--- a/doxyxml/class_c_b_sphere.xml
+++ /dev/null
@@ -1,494 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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diff --git a/doxyxml/class_c_poly.xml b/doxyxml/class_c_poly.xml
deleted file mode 100644
index 80b9bec..0000000
--- a/doxyxml/class_c_poly.xml
+++ /dev/null
@@ -1,490 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_c_poly" kind="class" language="C++" prot="public">
-    <compoundname>CPoly</compoundname>
-    <basecompoundref prot="public" virt="non-virtual">Eigen::VectorXcd</basecompoundref>
-    <includes refid="cpoly_8_h" local="no">cpoly.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_c_poly_1a969e3f70aad60653b9f4e610014fb978" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int CPoly::order</definition>
-        <argsstring></argsstring>
-        <name>order</name>
-        <qualifiedname>CPoly::order</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/cpoly.H" line="11" column="7" bodyfile="/home/weinberg/Projects/EXP/include/cpoly.H" bodystart="11" bodyend="-1"/>
-        <referencedby refid="class_c_poly_1ac452104fdea710634e68f09e5d4e60d3" compoundref="cpoly_8_h" startline="36" endline="36">getorder</referencedby>
-        <referencedby refid="class_c_poly_1a8dd20f6c37eb654f8633ea4ba3e24ccc" compoundref="cpoly_8_h" startline="31" endline="31">Pop</referencedby>
-      </memberdef>
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-    <sectiondef kind="private-func">
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-        <type>void</type>
-        <definition>void CPoly::reduce_order</definition>
-        <argsstring>(void)</argsstring>
-        <name>reduce_order</name>
-        <qualifiedname>CPoly::reduce_order</qualifiedname>
-        <param>
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-        <argsstring>(const CPoly &amp;)</argsstring>
-        <name>CPoly</name>
-        <qualifiedname>CPoly::CPoly</qualifiedname>
-        <param>
-          <type>const <ref refid="class_c_poly" kindref="compound">CPoly</ref> &amp;</type>
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-        <briefdescription>
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-        <name>CPoly</name>
-        <qualifiedname>CPoly::CPoly</qualifiedname>
-        <param>
-          <type>const Eigen::VectorXcd &amp;</type>
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-        </briefdescription>
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-        <qualifiedname>CPoly::eval</qualifiedname>
-        <param>
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-        </param>
-        <briefdescription>
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-        <argsstring>(void)</argsstring>
-        <name>getorder</name>
-        <qualifiedname>CPoly::getorder</qualifiedname>
-        <param>
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-          <type>const <ref refid="class_c_poly" kindref="compound">CPoly</ref> &amp;</type>
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-        <name>operator+</name>
-        <qualifiedname>CPoly::operator+</qualifiedname>
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-          <type>const <ref refid="class_c_poly" kindref="compound">CPoly</ref> &amp;</type>
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-        <qualifiedname>CPoly::operator-</qualifiedname>
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-    <collaborationgraph>
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-      <member refid="class_c_poly_1a60135c14cac772b71b1c4d37e50a2412" prot="private" virt="non-virtual"><scope>CPoly</scope><name>reduce_order</name></member>
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diff --git a/doxyxml/class_cache.xml b/doxyxml/class_cache.xml
deleted file mode 100644
index f11e64b..0000000
--- a/doxyxml/class_cache.xml
+++ /dev/null
@@ -1,131 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_cache" kind="class" language="C++" prot="public">
-    <compoundname>Cache</compoundname>
-    <basecompoundref prot="public" virt="non-virtual">std::map&lt; key_t, value_t &gt;</basecompoundref>
-    <includes refid="_k_dtree_8_h" local="no">KDtree.H</includes>
-    <templateparamlist>
-      <param>
-        <type>typename key_t</type>
-      </param>
-      <param>
-        <type>typename value_t</type>
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-        <name>max_size</name>
-        <qualifiedname>Cache::max_size</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="27" column="7" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="27" bodyend="-1"/>
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-        <name>Cache</name>
-        <qualifiedname>Cache::Cache</qualifiedname>
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-          <defval>1</defval>
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-        <qualifiedname>Cache::resize</qualifiedname>
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diff --git a/doxyxml/class_center_file.xml b/doxyxml/class_center_file.xml
deleted file mode 100644
index 6e37c25..0000000
--- a/doxyxml/class_center_file.xml
+++ /dev/null
@@ -1,91 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_center_file" kind="class" language="C++" prot="public">
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-        <definition>std::vector&lt;std::array&lt;double, 3&gt; &gt; CenterFile::data</definition>
-        <argsstring></argsstring>
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-        <qualifiedname>CenterFile::data</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/CenterFile.H" line="24" column="15" bodyfile="/home/weinberg/Projects/EXP/include/CenterFile.H" bodystart="24" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>time</name>
-        <qualifiedname>CenterFile::time</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/CenterFile.H" line="23" column="15" bodyfile="/home/weinberg/Projects/EXP/include/CenterFile.H" bodystart="23" bodyend="-1"/>
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-        <type></type>
-        <definition>CenterFile::CenterFile</definition>
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-        <name>CenterFile</name>
-        <qualifiedname>CenterFile::CenterFile</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
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-<para>Read in the file and cache the data. </para>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/CenterFile.H" line="29" column="3"/>
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-        <type>std::array&lt; double, 3 &gt;</type>
-        <definition>std::array&lt; double, 3 &gt; CenterFile::operator()</definition>
-        <argsstring>(double T)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>CenterFile::operator()</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>T</declname>
-        </param>
-        <briefdescription>
-<para>Interpolate and provide the desired center. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/CenterFile.H" line="32" column="14"/>
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-<para>Read a file in @Orient format and provide the center interpolated in time. The YAML node needs two key word<ndash/>value pairs:</para>
-<para>file: file name of orient-style center info type: EJ or COM</para>
-<para>This implementation will exit for <emphasis>safety</emphasis> if it is called beyond its range. </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/CenterFile.H" line="20" column="1" bodyfile="/home/weinberg/Projects/EXP/include/CenterFile.H" bodystart="21" bodyend="34"/>
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-      <member refid="class_center_file_1a6bb42c69e83690b3ba95d52a53dbfd5f" prot="public" virt="non-virtual"><scope>CenterFile</scope><name>operator()</name></member>
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diff --git a/doxyxml/class_cheb1.xml b/doxyxml/class_cheb1.xml
deleted file mode 100644
index b205397..0000000
--- a/doxyxml/class_cheb1.xml
+++ /dev/null
@@ -1,230 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_cheb1" kind="class" language="C++" prot="public">
-    <compoundname>Cheb1</compoundname>
-    <basecompoundref refid="class_ortho_poly" prot="public" virt="non-virtual">OrthoPoly</basecompoundref>
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diff --git a/doxyxml/class_cheb2.xml b/doxyxml/class_cheb2.xml
deleted file mode 100644
index d153111..0000000
--- a/doxyxml/class_cheb2.xml
+++ /dev/null
@@ -1,230 +0,0 @@
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-        <definition>double Cheb2::w</definition>
-        <argsstring>(const double x)</argsstring>
-        <name>w</name>
-        <qualifiedname>Cheb2::w</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a789ce34b2842e2ddf958e0af56cdc4e6">w</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
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-        <detaileddescription>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>Cheb2</label>
-        <link refid="class_cheb2"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>Cheb2</label>
-        <link refid="class_cheb2"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="159" column="1" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="160" bodyend="180"/>
-    <listofallmembers>
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-      <member refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" prot="protected" virt="non-virtual"><scope>Cheb2</scope><name>b</name></member>
-      <member refid="class_cheb2_1af6b0c70c48aa34c3f0498e0a58a6c48e" prot="public" virt="non-virtual"><scope>Cheb2</scope><name>Cheb2</name></member>
-      <member refid="class_cheb2_1a5303f7db171db0ee3b35b0c0a7d2908f" prot="public" virt="virtual"><scope>Cheb2</scope><name>coef1</name></member>
-      <member refid="class_cheb2_1a2c4c84551fd52fa733f5bc903481c30d" prot="public" virt="virtual"><scope>Cheb2</scope><name>coef2</name></member>
-      <member refid="class_cheb2_1a2a81555193a44fd55dc0549917640c23" prot="public" virt="virtual"><scope>Cheb2</scope><name>coef3</name></member>
-      <member refid="class_cheb2_1a6a34ad54975368f6060341cbcf12db04" prot="public" virt="virtual"><scope>Cheb2</scope><name>coef4</name></member>
-      <member refid="class_ortho_poly_1a2477962944125247f6bb446ba361afaa" prot="private" virt="non-virtual"><scope>Cheb2</scope><name>coefs</name></member>
-      <member refid="class_ortho_poly_1afe8111b9a2946e381e7283a8e06da3b8" prot="public" virt="non-virtual"><scope>Cheb2</scope><name>f</name></member>
-      <member refid="class_cheb2_1a96e82bc058b95ba0f9109ddd137d5091" prot="public" virt="virtual"><scope>Cheb2</scope><name>f0</name></member>
-      <member refid="class_cheb2_1a7cbc8d1e1c0571b7a2e6bdd8d1df7fe2" prot="public" virt="virtual"><scope>Cheb2</scope><name>f1</name></member>
-      <member refid="class_ortho_poly_1aed2903244bcd8423c11ddb3343f701c0" prot="public" virt="non-virtual"><scope>Cheb2</scope><name>fv</name></member>
-      <member refid="class_ortho_poly_1a954a4941a43f355ddb7e17185eca5052" prot="public" virt="non-virtual"><scope>Cheb2</scope><name>get_a</name></member>
-      <member refid="class_ortho_poly_1a5e664c78f30952123f31d15582e0bee2" prot="public" virt="non-virtual"><scope>Cheb2</scope><name>get_b</name></member>
-      <member refid="class_cheb2_1a9ddb27326d84b1e34210b8c1713c7b2c" prot="public" virt="virtual"><scope>Cheb2</scope><name>h</name></member>
-      <member refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" prot="protected" virt="non-virtual"><scope>Cheb2</scope><name>param</name></member>
-      <member refid="class_cheb2_1ac6cb9737949aaf8bbad129ee21609778" prot="public" virt="virtual"><scope>Cheb2</scope><name>w</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_cheby1d.xml b/doxyxml/class_cheby1d.xml
deleted file mode 100644
index a10803a..0000000
--- a/doxyxml/class_cheby1d.xml
+++ /dev/null
@@ -1,722 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_cheby1d" kind="class" language="C++" prot="public">
-    <compoundname>Cheby1d</compoundname>
-    <basecompoundref refid="class_interp1d" prot="public" virt="non-virtual">Interp1d</basecompoundref>
-    <includes refid="interp_8_h" local="no">interp.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_cheby1d_1afae81d1111b8ea7f5aae3b0cab0d54fc" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Cheby1d::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>Cheby1d::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="107" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="107" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cheby1d_1a1ec4dfe58859cca50bed5e0110ecc52b" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Cheby1d::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>Cheby1d::b</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="107" column="12" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="107" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cheby1d_1a9663c4e8f89d4244cb41989537418994" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; Cheby1d::c</definition>
-        <argsstring></argsstring>
-        <name>c</name>
-        <qualifiedname>Cheby1d::c</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="108" column="15" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="108" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cheby1d_1a514dc54ba153f13915b05133caf59e46" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; Cheby1d::c1</definition>
-        <argsstring></argsstring>
-        <name>c1</name>
-        <qualifiedname>Cheby1d::c1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="109" column="15" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="109" bodyend="-1"/>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; Cheby1d::c2</definition>
-        <argsstring></argsstring>
-        <name>c2</name>
-        <qualifiedname>Cheby1d::c2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <type>bool</type>
-        <definition>bool Cheby1d::defined</definition>
-        <argsstring></argsstring>
-        <name>defined</name>
-        <qualifiedname>Cheby1d::defined</qualifiedname>
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-        <argsstring></argsstring>
-        <name>xmax</name>
-        <qualifiedname>Cheby1d::xmax</qualifiedname>
-        <initializer>=0</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="107" column="19" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="107" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cheby1d_1a5703f69ccf31d75a9773464995c17a95" prot="private" static="no" mutable="no">
-        <type>double</type>
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-        <qualifiedname>Cheby1d::xmin</qualifiedname>
-        <initializer>=0</initializer>
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-        <type>void</type>
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-        <name>chder</name>
-        <qualifiedname>Cheby1d::chder</qualifiedname>
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-        <qualifiedname>Cheby1d::chebev</qualifiedname>
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-        <type>double</type>
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-        <qualifiedname>Cheby1d::chebint</qualifiedname>
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-<para>Handle error. </para>
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-<para>Null constructor. </para>
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-        </param>
-        <param>
-          <type>const double</type>
-          <declname>B</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Construct with std::vector input (N is Chebyshev order) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="129" column="3"/>
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-      <memberdef kind="function" id="class_cheby1d_1a05043bfe26497eb5d5652320ccfcbb8f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Cheby1d::Cheby1d</definition>
-        <argsstring>(const Eigen::VectorXd &amp;x, const Eigen::VectorXd &amp;y, int N)</argsstring>
-        <name>Cheby1d</name>
-        <qualifiedname>Cheby1d::Cheby1d</qualifiedname>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Construct with Eigen input (N is Chebyshev order) using data limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="133" column="3"/>
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-      <memberdef kind="function" id="class_cheby1d_1aabc443ecc751575c7245d889a4c37158" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Cheby1d::Cheby1d</definition>
-        <argsstring>(std::vector&lt; double &gt; &amp;x, std::vector&lt; double &gt; &amp;y, int N)</argsstring>
-        <name>Cheby1d</name>
-        <qualifiedname>Cheby1d::Cheby1d</qualifiedname>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Construct with std::vector input (N is Chebyshev order) using data limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="136" column="3"/>
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-      <memberdef kind="function" id="class_cheby1d_1a956231cd4074dca9c157764135ba036c" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Cheby1d::deriv</definition>
-        <argsstring>(const double &amp;x)</argsstring>
-        <name>deriv</name>
-        <qualifiedname>Cheby1d::deriv</qualifiedname>
-        <reimplements refid="class_interp1d_1a47936fb17ab09ba1a5adae98615703f7">deriv</reimplements>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate first derivative. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="149" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="149" bodyend="150"/>
-        <references refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62">bomb</references>
-        <references refid="class_cheby1d_1a514dc54ba153f13915b05133caf59e46" compoundref="interp_8_h" startline="109">c1</references>
-        <references refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6">chebev</references>
-        <references refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" compoundref="interp_8_h" startline="116">defined</references>
-        <referencedby refid="class_cheby1d_1ad64011d2a0b792c8cca856cdee1310ff" compoundref="interp_8_h" startline="168" endline="176">eval</referencedby>
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-      <memberdef kind="function" id="class_cheby1d_1a910817e73b71e20d4858d6f021e9c2f7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Cheby1d::deriv2</definition>
-        <argsstring>(const double &amp;x)</argsstring>
-        <name>deriv2</name>
-        <qualifiedname>Cheby1d::deriv2</qualifiedname>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the second derivative. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="179" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="179" bodyend="180"/>
-        <references refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62">bomb</references>
-        <references refid="class_cheby1d_1a514dc54ba153f13915b05133caf59e46" compoundref="interp_8_h" startline="109">c1</references>
-        <references refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6">chebev</references>
-        <references refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" compoundref="interp_8_h" startline="116">defined</references>
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-      <memberdef kind="function" id="class_cheby1d_1a692c77d49493eecf92a184452f032c40" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Cheby1d::eval</definition>
-        <argsstring>(const double &amp;x)</argsstring>
-        <name>eval</name>
-        <qualifiedname>Cheby1d::eval</qualifiedname>
-        <reimplements refid="class_interp1d_1acb91fcf561ac596869ce571c30cf5583">eval</reimplements>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the interpolant. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="145" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="145" bodyend="146"/>
-        <references refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62">bomb</references>
-        <references refid="class_cheby1d_1a9663c4e8f89d4244cb41989537418994" compoundref="interp_8_h" startline="108">c</references>
-        <references refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6">chebev</references>
-        <references refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" compoundref="interp_8_h" startline="116">defined</references>
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-        <type>void</type>
-        <definition>void Cheby1d::eval</definition>
-        <argsstring>(const double &amp;x, double &amp;val, double &amp;deriv)</argsstring>
-        <name>eval</name>
-        <qualifiedname>Cheby1d::eval</qualifiedname>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>val</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>deriv</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the interpolant and its first derivative. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="168" column="8" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="168" bodyend="176"/>
-        <references refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62">bomb</references>
-        <references refid="class_cheby1d_1a9663c4e8f89d4244cb41989537418994" compoundref="interp_8_h" startline="108">c</references>
-        <references refid="class_cheby1d_1a514dc54ba153f13915b05133caf59e46" compoundref="interp_8_h" startline="109">c1</references>
-        <references refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6">chebev</references>
-        <references refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" compoundref="interp_8_h" startline="116">defined</references>
-        <references refid="class_cheby1d_1a956231cd4074dca9c157764135ba036c" compoundref="interp_8_h" startline="149" endline="150">deriv</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cheby1d_1ac7ab09acf3695f9947df7d9611b97c7b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Cheby1d::integral</definition>
-        <argsstring>(const double &amp;x)</argsstring>
-        <name>integral</name>
-        <qualifiedname>Cheby1d::integral</qualifiedname>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate integral of interpolant. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="153" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="153" bodyend="154"/>
-        <references refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62">bomb</references>
-        <references refid="class_cheby1d_1a2f0a0422210a51fdf4e7c5b569f0cb41">chebint</references>
-        <references refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" compoundref="interp_8_h" startline="116">defined</references>
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-      <memberdef kind="function" id="class_cheby1d_1ac6bbe27c91f9deddfe63221024f9c0a7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cheby1d::new_data</definition>
-        <argsstring>(std::vector&lt; double &gt; &amp;X, std::vector&lt; double &gt; &amp;Y, int N)</argsstring>
-        <name>new_data</name>
-        <qualifiedname>Cheby1d::new_data</qualifiedname>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>X</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>Y</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Update the data. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="165" column="8"/>
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-      <memberdef kind="function" id="class_cheby1d_1a8b43853e8403c36cbfd980c835f165e9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cheby1d::new_func</definition>
-        <argsstring>(std::function&lt; double(double)&gt; func, double A, double B, int N)</argsstring>
-        <name>new_func</name>
-        <qualifiedname>Cheby1d::new_func</qualifiedname>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-          <declname>func</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>A</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>B</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Generate interpolant from a function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="162" column="8"/>
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-        <type>void</type>
-        <definition>void Cheby1d::new_limits</definition>
-        <argsstring>(double A, double B)</argsstring>
-        <name>new_limits</name>
-        <qualifiedname>Cheby1d::new_limits</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>A</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>B</declname>
-        </param>
-        <briefdescription>
-<para>Update the data limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="159" column="8"/>
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-        <type><ref refid="class_cheby1d" kindref="compound">Cheby1d</ref> &amp;</type>
-        <definition>Cheby1d &amp; Cheby1d::operator=</definition>
-        <argsstring>(const Cheby1d &amp;)</argsstring>
-        <name>operator=</name>
-        <qualifiedname>Cheby1d::operator=</qualifiedname>
-        <param>
-          <type>const <ref refid="class_cheby1d" kindref="compound">Cheby1d</ref> &amp;</type>
-        </param>
-        <briefdescription>
-<para>Copy constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="function" id="class_cheby1d_1a20fc7c34e98a3b7fcf5f04e1683c2829" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Cheby1d::xhi</definition>
-        <argsstring>()</argsstring>
-        <name>xhi</name>
-        <qualifiedname>Cheby1d::xhi</qualifiedname>
-        <reimplements refid="class_interp1d_1a7acc2957f6163115ad925d21d9ab2783">xhi</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="188" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="188" bodyend="188"/>
-        <references refid="class_cheby1d_1a261332af6bffe70aae0b3a329df27dc6" compoundref="interp_8_h" startline="107">xmax</references>
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-        <type>double</type>
-        <definition>double Cheby1d::xlo</definition>
-        <argsstring>()</argsstring>
-        <name>xlo</name>
-        <qualifiedname>Cheby1d::xlo</qualifiedname>
-        <reimplements refid="class_interp1d_1ad7d8aaee41f1df6e533bfbb3089e8b67">xlo</reimplements>
-        <briefdescription>
-<para>Data limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="187" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="187" bodyend="187"/>
-        <references refid="class_cheby1d_1a5703f69ccf31d75a9773464995c17a95" compoundref="interp_8_h" startline="107">xmin</references>
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-        <type></type>
-        <definition>Cheby1d::~Cheby1d</definition>
-        <argsstring>()</argsstring>
-        <name>~Cheby1d</name>
-        <qualifiedname>Cheby1d::~Cheby1d</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="142" column="3"/>
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-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
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-        <link refid="class_cheby1d"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Interp1d</label>
-        <link refid="class_interp1d"/>
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-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>Cheby1d</label>
-        <link refid="class_cheby1d"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Interp1d</label>
-        <link refid="class_interp1d"/>
-      </node>
-    </collaborationgraph>
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-      <member refid="class_cheby1d_1a05043bfe26497eb5d5652320ccfcbb8f" prot="public" virt="non-virtual"><scope>Cheby1d</scope><name>Cheby1d</name></member>
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diff --git a/doxyxml/class_checkpoint_timer.xml b/doxyxml/class_checkpoint_timer.xml
deleted file mode 100644
index 8882b93..0000000
--- a/doxyxml/class_checkpoint_timer.xml
+++ /dev/null
@@ -1,289 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_checkpoint_timer" kind="class" language="C++" prot="public">
-    <compoundname>CheckpointTimer</compoundname>
-    <includes refid="chk_timer_8_h" local="no">chkTimer.H</includes>
-    <sectiondef kind="private-attrib">
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-        <type>time_t</type>
-        <definition>time_t CheckpointTimer::current</definition>
-        <argsstring></argsstring>
-        <name>current</name>
-        <qualifiedname>CheckpointTimer::current</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <qualifiedname>CheckpointTimer::initial</qualifiedname>
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-        <definition>time_t CheckpointTimer::last</definition>
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-        <qualifiedname>CheckpointTimer::last</qualifiedname>
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-        <type>unsigned</type>
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-        <definition>time_t CheckpointTimer::delta</definition>
-        <argsstring></argsstring>
-        <name>delta</name>
-        <qualifiedname>CheckpointTimer::delta</qualifiedname>
-        <briefdescription>
-<para>Safety time interval [Default: 10 minute warning]. </para>
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-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/chkTimer.H" line="54" column="17" bodyfile="/home/weinberg/Projects/EXP/src/chkTimer.H" bodystart="54" bodyend="-1"/>
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-        <type>time_t</type>
-        <definition>time_t CheckpointTimer::diag</definition>
-        <argsstring></argsstring>
-        <name>diag</name>
-        <qualifiedname>CheckpointTimer::diag</qualifiedname>
-        <briefdescription>
-<para>Diagnostic output interval [Default: 2 hours]. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/chkTimer.H" line="57" column="17" bodyfile="/home/weinberg/Projects/EXP/src/chkTimer.H" bodystart="57" bodyend="-1"/>
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-        <type>string</type>
-        <definition>string CheckpointTimer::exec</definition>
-        <argsstring>(string &amp;cmd)</argsstring>
-        <name>exec</name>
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-          <declname>cmd</declname>
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-<para>Execute a command and pipe the results to string. </para>
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-<para>Get the remaining execution time. </para>
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-<para>Constructor. </para>
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-        <briefdescription>
-<para><ref refid="class_time" kindref="compound">Time</ref> to quit. </para>
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-        <qualifiedname>CheckpointTimer::mark</qualifiedname>
-        <briefdescription>
-<para>Mark the current time. </para>
-        </briefdescription>
-        <detaileddescription>
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-<para>This class keeps track of time between time steps and calls for a checkpoint and signals an exit if there will not be time to reach the next checkpoint </para>
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diff --git a/doxyxml/class_color_gradient.xml b/doxyxml/class_color_gradient.xml
deleted file mode 100644
index 64043a2..0000000
--- a/doxyxml/class_color_gradient.xml
+++ /dev/null
@@ -1,204 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_color_gradient" kind="class" language="C++" prot="public">
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-        <qualifiedname>ColorGradient::color</qualifiedname>
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-<para>An array of color points in ascending value. </para>
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-        <argsstring>(float red, float green, float blue, float value)</argsstring>
-        <name>addColorPoint</name>
-        <qualifiedname>ColorGradient::addColorPoint</qualifiedname>
-        <param>
-          <type>float</type>
-          <declname>red</declname>
-        </param>
-        <param>
-          <type>float</type>
-          <declname>green</declname>
-        </param>
-        <param>
-          <type>float</type>
-          <declname>blue</declname>
-        </param>
-        <param>
-          <type>float</type>
-          <declname>value</declname>
-        </param>
-        <briefdescription>
-<para>Inserts a new color point into its correct position: </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="28" column="8" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="28" bodyend="35"/>
-        <references refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" compoundref="_color_gradient_8_h" startline="21">color</references>
-      </memberdef>
-      <memberdef kind="function" id="class_color_gradient_1aeaa1447003e70159ab0bcd4197f80aa4" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void ColorGradient::clearGradient</definition>
-        <argsstring>()</argsstring>
-        <name>clearGradient</name>
-        <qualifiedname>ColorGradient::clearGradient</qualifiedname>
-        <briefdescription>
-<para>Inserts a new color point into its correct position: </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="38" column="8" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="38" bodyend="38"/>
-        <references refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" compoundref="_color_gradient_8_h" startline="21">color</references>
-      </memberdef>
-      <memberdef kind="function" id="class_color_gradient_1a4acdb3ea165dfe1e1be1644e16622934" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>ColorGradient::ColorGradient</definition>
-        <argsstring>()</argsstring>
-        <name>ColorGradient</name>
-        <qualifiedname>ColorGradient::ColorGradient</qualifiedname>
-        <briefdescription>
-<para>Default constructor: </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="25" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="25" bodyend="25"/>
-        <references refid="class_color_gradient_1a4b1b3a7d16ad611f5cca323a2f37ddce" compoundref="_color_gradient_8_h" startline="41" endline="44">createDefaultGradient</references>
-      </memberdef>
-      <memberdef kind="function" id="class_color_gradient_1a4b1b3a7d16ad611f5cca323a2f37ddce" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void ColorGradient::createDefaultGradient</definition>
-        <argsstring>()</argsstring>
-        <name>createDefaultGradient</name>
-        <qualifiedname>ColorGradient::createDefaultGradient</qualifiedname>
-        <briefdescription>
-<para>Default gradient. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="41" column="8" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="41" bodyend="44"/>
-        <references refid="class_color_gradient_1a55a6a3c5156681a13d03e5a8d73fe8e1" compoundref="_color_gradient_8_h" startline="47" endline="52">createGrayGradient</references>
-        <referencedby refid="class_color_gradient_1a4acdb3ea165dfe1e1be1644e16622934" compoundref="_color_gradient_8_h" startline="25" endline="25">ColorGradient</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_color_gradient_1a4ad064ae84546225ac4ddcde3af23844" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void ColorGradient::createFiveColorHeatMapGradient</definition>
-        <argsstring>()</argsstring>
-        <name>createFiveColorHeatMapGradient</name>
-        <qualifiedname>ColorGradient::createFiveColorHeatMapGradient</qualifiedname>
-        <briefdescription>
-<para>5 color heapmap gradient into the &quot;color&quot; vector: </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="68" column="8" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="68" bodyend="76"/>
-        <references refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" compoundref="_color_gradient_8_h" startline="21">color</references>
-      </memberdef>
-      <memberdef kind="function" id="class_color_gradient_1a55a6a3c5156681a13d03e5a8d73fe8e1" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void ColorGradient::createGrayGradient</definition>
-        <argsstring>()</argsstring>
-        <name>createGrayGradient</name>
-        <qualifiedname>ColorGradient::createGrayGradient</qualifiedname>
-        <briefdescription>
-<para>7 color heapmap gradient into the &quot;color&quot; vector: </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="47" column="8" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="47" bodyend="52"/>
-        <references refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" compoundref="_color_gradient_8_h" startline="21">color</references>
-        <referencedby refid="class_color_gradient_1a4b1b3a7d16ad611f5cca323a2f37ddce" compoundref="_color_gradient_8_h" startline="41" endline="44">createDefaultGradient</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_color_gradient_1a2dc5d51e25fcdc13d2e3a6077a603ef2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void ColorGradient::createSevenColorHeatMapGradient</definition>
-        <argsstring>()</argsstring>
-        <name>createSevenColorHeatMapGradient</name>
-        <qualifiedname>ColorGradient::createSevenColorHeatMapGradient</qualifiedname>
-        <briefdescription>
-<para>7 color heapmap gradient into the &quot;color&quot; vector: </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="55" column="8" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="55" bodyend="65"/>
-        <references refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" compoundref="_color_gradient_8_h" startline="21">color</references>
-      </memberdef>
-      <memberdef kind="function" id="class_color_gradient_1a87a0b8a79e205262a7427a7294cf3baf" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>png::rgb_pixel</type>
-        <definition>png::rgb_pixel ColorGradient::operator()</definition>
-        <argsstring>(const float value)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>ColorGradient::operator()</qualifiedname>
-        <param>
-          <type>const float</type>
-          <declname>value</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Inputs a (value) between 0 and 1 and outputs the (red), (green) and (blue) values representing that position in the gradient. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="80" column="18" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="80" bodyend="110"/>
-        <references refid="struct_color_gradient_1_1_color_point_1accc64344c40b5e53db0f0db6a5e1711d" compoundref="_color_gradient_8_h" startline="13">ColorGradient::ColorPoint::b</references>
-        <references refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" compoundref="_color_gradient_8_h" startline="21">color</references>
-        <references refid="struct_color_gradient_1_1_color_point_1ae319ced624675dc844843947bf76a2e0" compoundref="_color_gradient_8_h" startline="13">ColorGradient::ColorPoint::g</references>
-        <references refid="struct_color_gradient_1_1_color_point_1a49bba60a0dab6e93c7d1487a2c34d96d" compoundref="_color_gradient_8_h" startline="13">ColorGradient::ColorPoint::r</references>
-        <references refid="struct_color_gradient_1_1_color_point_1a0e4cf76fee334f31c96182f12c44cf09" compoundref="_color_gradient_8_h" startline="15">ColorGradient::ColorPoint::val</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Internal class used to store colors at different points in the gradient. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="7" column="1" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="8" bodyend="111"/>
-    <listofallmembers>
-      <member refid="class_color_gradient_1a611f25f238e0781f27d2821971f4ac27" prot="public" virt="non-virtual"><scope>ColorGradient</scope><name>addColorPoint</name></member>
-      <member refid="class_color_gradient_1aeaa1447003e70159ab0bcd4197f80aa4" prot="public" virt="non-virtual"><scope>ColorGradient</scope><name>clearGradient</name></member>
-      <member refid="class_color_gradient_1a40b6c2f12b13e0855745b420ef2847de" prot="private" virt="non-virtual"><scope>ColorGradient</scope><name>color</name></member>
-      <member refid="class_color_gradient_1a4acdb3ea165dfe1e1be1644e16622934" prot="public" virt="non-virtual"><scope>ColorGradient</scope><name>ColorGradient</name></member>
-      <member refid="class_color_gradient_1a4b1b3a7d16ad611f5cca323a2f37ddce" prot="public" virt="non-virtual"><scope>ColorGradient</scope><name>createDefaultGradient</name></member>
-      <member refid="class_color_gradient_1a4ad064ae84546225ac4ddcde3af23844" prot="public" virt="non-virtual"><scope>ColorGradient</scope><name>createFiveColorHeatMapGradient</name></member>
-      <member refid="class_color_gradient_1a55a6a3c5156681a13d03e5a8d73fe8e1" prot="public" virt="non-virtual"><scope>ColorGradient</scope><name>createGrayGradient</name></member>
-      <member refid="class_color_gradient_1a2dc5d51e25fcdc13d2e3a6077a603ef2" prot="public" virt="non-virtual"><scope>ColorGradient</scope><name>createSevenColorHeatMapGradient</name></member>
-      <member refid="class_color_gradient_1a87a0b8a79e205262a7427a7294cf3baf" prot="public" virt="non-virtual"><scope>ColorGradient</scope><name>operator()</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_component.xml b/doxyxml/class_component.xml
deleted file mode 100644
index 3c452e0..0000000
--- a/doxyxml/class_component.xml
+++ /dev/null
@@ -1,4221 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_component" kind="class" language="C++" prot="public">
-    <compoundname>Component</compoundname>
-    <includes refid="_component_8_h" local="no">Component.H</includes>
-    <sectiondef kind="user-defined">
-      <header>Center of mass system coordinates</header>
-      <memberdef kind="variable" id="class_component_1ab32eebbec1b8797bf50087c93cfa87dd" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::mtot0</definition>
-        <argsstring></argsstring>
-        <name>mtot0</name>
-        <qualifiedname>Component::mtot0</qualifiedname>
-        <briefdescription>
-<para>System mass, center of mass, center of velocity and acceleration. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="426" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="426" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" prot="public" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double * Component::com0</definition>
-        <argsstring></argsstring>
-        <name>com0</name>
-        <qualifiedname>Component::com0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="426" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="426" bodyend="-1"/>
-        <referencedby refid="class_component_1a0d6d65427000e1777ef439d82ee84fac" compoundref="_component_8_h" startline="775" endline="781">ConvertPos</referencedby>
-        <referencedby refid="class_component_1a816435a03232966d22ca427874e8dc4a" compoundref="_component_8_h" startline="727" endline="736">getCenter</referencedby>
-        <referencedby refid="class_component_1a8d01b4883e90afac5c75019d7123200f" compoundref="_component_8_h" startline="750" endline="760">Pos</referencedby>
-        <referencedby refid="class_component_1a994901da4204a29704874b1c1eb44f55" compoundref="_component_8_h" startline="714" endline="724">Pos</referencedby>
-        <referencedby refid="class_component_1a78c8d92520eceee58e5906ab3a9a47ec" compoundref="_component_8_h" startline="791" endline="797">PosConvert</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a986eae6a0994950d9401462e913dbc9e" prot="public" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double * Component::cov0</definition>
-        <argsstring></argsstring>
-        <name>cov0</name>
-        <qualifiedname>Component::cov0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="426" column="21" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="426" bodyend="-1"/>
-        <referencedby refid="class_component_1a7ca665f88447d50ae31427cdebed4c1d" compoundref="_component_8_h" startline="784" endline="789">ConvertVel</referencedby>
-        <referencedby refid="class_component_1adf9d24409865914ebbd72e60a91eba07" compoundref="_component_8_h" startline="763" endline="772">Vel</referencedby>
-        <referencedby refid="class_component_1a73f9ed983dd632e1714a694a31303214" compoundref="_component_8_h" startline="739" endline="747">Vel</referencedby>
-        <referencedby refid="class_component_1af2c76f5a207878f124452b9e23a0c0d0" compoundref="_component_8_h" startline="800" endline="805">VelConvert</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a10fb714b30dd698643eabd16a19bf7ae" prot="public" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double * Component::acc0</definition>
-        <argsstring></argsstring>
-        <name>acc0</name>
-        <qualifiedname>Component::acc0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="426" column="26" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="426" bodyend="-1"/>
-        <referencedby refid="class_component_1ab070226049c137d9b084dec0e562118d" compoundref="_component_8_h" startline="808" endline="816">Acc</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a804b3c7e90697f0dd24f37c745572c98" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::rcom</definition>
-        <argsstring></argsstring>
-        <name>rcom</name>
-        <qualifiedname>Component::rcom</qualifiedname>
-        <briefdescription>
-<para>Maximum radius for contribution to center-of-mass computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="428" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="428" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1aa1c2ac78ed29fed7f8708f87890096a9" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::mtot</definition>
-        <argsstring></argsstring>
-        <name>mtot</name>
-        <qualifiedname>Component::mtot</qualifiedname>
-        <briefdescription>
-<para>Total mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="433" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="433" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a1e0c7d20559872a296b1aa2f745068bb" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::dim</definition>
-        <argsstring></argsstring>
-        <name>dim</name>
-        <qualifiedname>Component::dim</qualifiedname>
-        <briefdescription>
-<para>Dimension of the phase space. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="436" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="436" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1afa7263bc728c6157097406251a78e874" prot="public" static="no" mutable="no">
-        <type>std::vector&lt; vector&lt; int &gt; &gt;</type>
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-        <argsstring></argsstring>
-        <name>levlist</name>
-        <qualifiedname>Component::levlist</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> list per level This will be a sorted list for each level. We use a vector rather than (e.g.) a set for the random insertion </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="442" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="442" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a3caf7f8f9dc30c1cbaf2c3834021e269" prot="public" static="no" mutable="no">
-        <type>std::vector&lt; vector&lt; unsigned &gt; &gt;</type>
-        <definition>std::vector&lt; vector&lt;unsigned&gt; &gt; Component::mdt_ctr</definition>
-        <argsstring></argsstring>
-        <name>mdt_ctr</name>
-        <qualifiedname>Component::mdt_ctr</qualifiedname>
-        <briefdescription>
-<para>Multstep dt type counter. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="445" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="445" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1af003c4289422e398b995b8f107f56522" prot="public" static="no" mutable="no">
-        <type><ref refid="class_pot_accel" kindref="compound">PotAccel</ref> *</type>
-        <definition>PotAccel* Component::force</definition>
-        <argsstring></argsstring>
-        <name>force</name>
-        <qualifiedname>Component::force</qualifiedname>
-        <briefdescription>
-<para>Points to associated force instance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="448" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="448" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a7b262f62f5d79a3aded7152172b0acfd" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::niattrib</definition>
-        <argsstring></argsstring>
-        <name>niattrib</name>
-        <qualifiedname>Component::niattrib</qualifiedname>
-        <briefdescription>
-<para>Attribute array dimensions for integer parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="451" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="451" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a0edc45102dd8a4ca73d9420655d2178c" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::ndattrib</definition>
-        <argsstring></argsstring>
-        <name>ndattrib</name>
-        <qualifiedname>Component::ndattrib</qualifiedname>
-        <briefdescription>
-<para>Attribute array dimensions for float-valued parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="454" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="454" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a0848fec4c83f105854c457b0e41f8cc4" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::EJ</definition>
-        <argsstring></argsstring>
-        <name>EJ</name>
-        <qualifiedname>Component::EJ</qualifiedname>
-        <briefdescription>
-<para>Binding energy orientation flag. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="457" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="457" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a6ca21332977c14c8b374588e6034694e" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::nEJkeep</definition>
-        <argsstring></argsstring>
-        <name>nEJkeep</name>
-        <qualifiedname>Component::nEJkeep</qualifiedname>
-        <briefdescription>
-<para>Number to keep in orientation stack. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="460" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="460" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a3cc2609f15049a1c76cfb1124f121433" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::nEJwant</definition>
-        <argsstring></argsstring>
-        <name>nEJwant</name>
-        <qualifiedname>Component::nEJwant</qualifiedname>
-        <briefdescription>
-<para>Target number of particles for average. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="463" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="463" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1acb18ebaffe3e471a7ed69d4167b79f26" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::nEJaccel</definition>
-        <argsstring></argsstring>
-        <name>nEJaccel</name>
-        <qualifiedname>Component::nEJaccel</qualifiedname>
-        <briefdescription>
-<para>Target number of states for pseudo-acceleration estimation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="466" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="466" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1ad581b33fb4c483db2158a2ee908a733f" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::EJx0</definition>
-        <argsstring></argsstring>
-        <name>EJx0</name>
-        <qualifiedname>Component::EJx0</qualifiedname>
-        <briefdescription>
-<para>Initial EJ center. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>x-coord </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="471" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="471" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a7d1b81553e95599e6ee079d0e5ba9814" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::EJy0</definition>
-        <argsstring></argsstring>
-        <name>EJy0</name>
-        <qualifiedname>Component::EJy0</qualifiedname>
-        <briefdescription>
-<para>y-coord </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="473" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="473" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a0172b3751c4cbbd2563d1e0660dc79a7" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::EJz0</definition>
-        <argsstring></argsstring>
-        <name>EJz0</name>
-        <qualifiedname>Component::EJz0</qualifiedname>
-        <briefdescription>
-<para>z-coord </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="475" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="475" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a3760322098407398d20dbd1245b0a02e" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::EJu0</definition>
-        <argsstring></argsstring>
-        <name>EJu0</name>
-        <qualifiedname>Component::EJu0</qualifiedname>
-        <briefdescription>
-<para>Initial EJ velocity. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>x-coord </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="481" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="481" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1ab2142d26f2e76f1cd95f3a512ac2110b" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::EJv0</definition>
-        <argsstring></argsstring>
-        <name>EJv0</name>
-        <qualifiedname>Component::EJv0</qualifiedname>
-        <briefdescription>
-<para>y-coord </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="483" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="483" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a229af6a82b31ca7530c1589c89b3dd2a" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::EJw0</definition>
-        <argsstring></argsstring>
-        <name>EJw0</name>
-        <qualifiedname>Component::EJw0</qualifiedname>
-        <briefdescription>
-<para>z-coord </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="485" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="485" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a910a7be41060224e82c233c307e48805" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::EJdT</definition>
-        <argsstring></argsstring>
-        <name>EJdT</name>
-        <qualifiedname>Component::EJdT</qualifiedname>
-        <briefdescription>
-<para>Spacing between EJ samples. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="489" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="489" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a2c2c8d5538f8fd219c08ddb65f4ae93b" prot="public" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Component::EJdiag</definition>
-        <argsstring></argsstring>
-        <name>EJdiag</name>
-        <qualifiedname>Component::EJdiag</qualifiedname>
-        <briefdescription>
-<para>Print verbose diagnostics. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="492" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="492" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a1e07a6360a18c0edd5a8527817cdc296" prot="public" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Component::EJdryrun</definition>
-        <argsstring></argsstring>
-        <name>EJdryrun</name>
-        <qualifiedname>Component::EJdryrun</qualifiedname>
-        <briefdescription>
-<para>Do not apply transformation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="495" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="495" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a7d0e980971e9fd8fd956f6f690ab2ff1" prot="public" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Component::EJkinE</definition>
-        <argsstring></argsstring>
-        <name>EJkinE</name>
-        <qualifiedname>Component::EJkinE</qualifiedname>
-        <briefdescription>
-<para>Use particle KE for energy computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="498" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="498" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1af8b79c2070bceb913ed7eb678f731ff8" prot="public" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Component::EJext</definition>
-        <argsstring></argsstring>
-        <name>EJext</name>
-        <qualifiedname>Component::EJext</qualifiedname>
-        <briefdescription>
-<para>Use external potential for energy computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="501" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="501" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a7f5b67cd5379433309d4d32c9015712b" prot="public" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Component::EJlinear</definition>
-        <argsstring></argsstring>
-        <name>EJlinear</name>
-        <qualifiedname>Component::EJlinear</qualifiedname>
-        <briefdescription>
-<para>Move center at constant velocity specified by (EJu0, EJv0, EJw0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="504" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="504" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1aeeec997d4726ef359f0150665b6006ff" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::EJdamp</definition>
-        <argsstring></argsstring>
-        <name>EJdamp</name>
-        <qualifiedname>Component::EJdamp</qualifiedname>
-        <briefdescription>
-<para>Damping factor for center determination (&lt; 1.0 for damping) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="507" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="507" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a7430627b74f8a440007f516840e36d36" prot="public" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Component::com_system</definition>
-        <argsstring></argsstring>
-        <name>com_system</name>
-        <qualifiedname>Component::com_system</qualifiedname>
-        <briefdescription>
-<para>Use center of mass coordinate system. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="510" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="510" bodyend="-1"/>
-        <referencedby refid="class_component_1ab070226049c137d9b084dec0e562118d" compoundref="_component_8_h" startline="808" endline="816">Acc</referencedby>
-        <referencedby refid="class_component_1a0d6d65427000e1777ef439d82ee84fac" compoundref="_component_8_h" startline="775" endline="781">ConvertPos</referencedby>
-        <referencedby refid="class_component_1a7ca665f88447d50ae31427cdebed4c1d" compoundref="_component_8_h" startline="784" endline="789">ConvertVel</referencedby>
-        <referencedby refid="class_component_1a816435a03232966d22ca427874e8dc4a" compoundref="_component_8_h" startline="727" endline="736">getCenter</referencedby>
-        <referencedby refid="class_component_1a8d01b4883e90afac5c75019d7123200f" compoundref="_component_8_h" startline="750" endline="760">Pos</referencedby>
-        <referencedby refid="class_component_1a994901da4204a29704874b1c1eb44f55" compoundref="_component_8_h" startline="714" endline="724">Pos</referencedby>
-        <referencedby refid="class_component_1a78c8d92520eceee58e5906ab3a9a47ec" compoundref="_component_8_h" startline="791" endline="797">PosConvert</referencedby>
-        <referencedby refid="class_component_1adf9d24409865914ebbd72e60a91eba07" compoundref="_component_8_h" startline="763" endline="772">Vel</referencedby>
-        <referencedby refid="class_component_1a73f9ed983dd632e1714a694a31303214" compoundref="_component_8_h" startline="739" endline="747">Vel</referencedby>
-        <referencedby refid="class_component_1af2c76f5a207878f124452b9e23a0c0d0" compoundref="_component_8_h" startline="800" endline="805">VelConvert</referencedby>
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-        <type>bool</type>
-        <definition>bool Component::com_log</definition>
-        <argsstring></argsstring>
-        <name>com_log</name>
-        <qualifiedname>Component::com_log</qualifiedname>
-        <briefdescription>
-<para>Log the center of mass coordinate system at each step. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="513" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="513" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Component::rtrunc</definition>
-        <argsstring></argsstring>
-        <name>rtrunc</name>
-        <qualifiedname>Component::rtrunc</qualifiedname>
-        <briefdescription>
-<para>Maximum radius from center for force evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="516" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="516" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Component::timers</definition>
-        <argsstring></argsstring>
-        <name>timers</name>
-        <qualifiedname>Component::timers</qualifiedname>
-        <briefdescription>
-<para>CUDA timing info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="519" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="519" bodyend="-1"/>
-        <referencedby refid="class_cube_1_1exe_timer_1a6a72d798de758a187cdc1efe342cf444" compoundref="_cube_8_h" startline="124" endline="145">Cube::exeTimer::~exeTimer</referencedby>
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-        <type>bool</type>
-        <definition>bool Component::buffered</definition>
-        <argsstring></argsstring>
-        <name>buffered</name>
-        <qualifiedname>Component::buffered</qualifiedname>
-        <briefdescription>
-<para>Use buffered binary writes. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="522" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="522" bodyend="-1"/>
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-        <type><ref refid="class_orient" kindref="compound">Orient</ref> *</type>
-        <definition>Orient* Component::orient</definition>
-        <argsstring></argsstring>
-        <name>orient</name>
-        <qualifiedname>Component::orient</qualifiedname>
-        <briefdescription>
-<para>Orientation cache. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="525" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="525" bodyend="-1"/>
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-        <type><ref refid="class_timer" kindref="compound">Timer</ref></type>
-        <definition>Timer Component::time_so_far</definition>
-        <argsstring></argsstring>
-        <name>time_so_far</name>
-        <qualifiedname>Component::time_so_far</qualifiedname>
-        <briefdescription>
-<para>Running clock on the current potential/force evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="956" column="9" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="956" bodyend="-1"/>
-        <referencedby refid="class_component_1a3d90d8e34006bd62686c42aaa031cf80" compoundref="_component_8_h" startline="959" endline="959">get_time_sofar</referencedby>
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-        <type></type>
-        <definition>Component::Component</definition>
-        <argsstring>(YAML::Node &amp;conf)</argsstring>
-        <name>Component</name>
-        <qualifiedname>Component::Component</qualifiedname>
-        <param>
-          <type>YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>The constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Takes the id string id and phase space file name as arguments </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="531" column="3"/>
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-      <memberdef kind="function" id="class_component_1a40f7b33f079cfc26a60bc7de2db2318b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Component::Component</definition>
-        <argsstring>(YAML::Node &amp;, istream *in, bool SPL)</argsstring>
-        <name>Component</name>
-        <qualifiedname>Component::Component</qualifiedname>
-        <param>
-          <type>YAML::Node &amp;</type>
-        </param>
-        <param>
-          <type>istream *</type>
-          <declname>in</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>SPL</declname>
-        </param>
-        <briefdescription>
-<para>Initialize from file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="534" column="3"/>
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-      <memberdef kind="function" id="class_component_1ab8378fa275af98e568a7e91d33d867af" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Component::~Component</definition>
-        <argsstring>()</argsstring>
-        <name>~Component</name>
-        <qualifiedname>Component::~Component</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="537" column="3"/>
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-      <memberdef kind="function" id="class_component_1aaff1d638ac8c390460e34e3e90c6854c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref> *</type>
-        <definition>PartPtr * Component::get_particles</definition>
-        <argsstring>(int *number)</argsstring>
-        <name>get_particles</name>
-        <qualifiedname>Component::get_particles</qualifiedname>
-        <param>
-          <type>int *</type>
-          <declname>number</declname>
-        </param>
-        <briefdescription>
-<para>Parallel gather. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="540" column="12"/>
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-        <type>int</type>
-        <definition>int Component::particle_count</definition>
-        <argsstring>(int node)</argsstring>
-        <name>particle_count</name>
-        <qualifiedname>Component::particle_count</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>node</declname>
-        </param>
-        <briefdescription>
-<para>Retrieve particle count on a particular node (one node at a time) </para>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="543" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="543" bodyend="546"/>
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-        <references refid="localmpi_8_h_1a31bfe068640b411bea3df0d69177ded5">numprocs</references>
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-        <type>vector&lt; unsigned int &gt;</type>
-        <definition>vector&lt; unsigned int &gt; Component::particle_count</definition>
-        <argsstring>()</argsstring>
-        <name>particle_count</name>
-        <qualifiedname>Component::particle_count</qualifiedname>
-        <briefdescription>
-<para>Retrieve particle count on a particular node (all nodes at once) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="549" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="549" bodyend="549"/>
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-        <type>void</type>
-        <definition>void Component::write_binary</definition>
-        <argsstring>(ostream *out, bool real4=false)</argsstring>
-        <name>write_binary</name>
-        <qualifiedname>Component::write_binary</qualifiedname>
-        <param>
-          <type>ostream *</type>
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-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Write binary component phase-space structure. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <type>void</type>
-        <definition>void Component::write_binary_header</definition>
-        <argsstring>(ostream *out, bool real4, std::string prefix, int nth=1)</argsstring>
-        <name>write_binary_header</name>
-        <qualifiedname>Component::write_binary_header</qualifiedname>
-        <param>
-          <type>ostream *</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>prefix</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nth</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-<para>Write header for per-node writes. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="555" column="8"/>
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-        <type>void</type>
-        <definition>void Component::write_binary_particles</definition>
-        <argsstring>(std::ostream *out, bool real4)</argsstring>
-        <name>write_binary_particles</name>
-        <qualifiedname>Component::write_binary_particles</qualifiedname>
-        <param>
-          <type>std::ostream *</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-        </param>
-        <briefdescription>
-<para>Write particles for per-node writes. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="558" column="8"/>
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-        <type>void</type>
-        <definition>void Component::write_binary_particles</definition>
-        <argsstring>(std::vector&lt; std::shared_ptr&lt; std::ofstream &gt; &gt; &amp;out, bool real4)</argsstring>
-        <name>write_binary_particles</name>
-        <qualifiedname>Component::write_binary_particles</qualifiedname>
-        <param>
-          <type>std::vector&lt; std::shared_ptr&lt; std::ofstream &gt; &gt; &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-        </param>
-        <briefdescription>
-<para>Write particles for per-node writes (multithreaded version) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="561" column="8"/>
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-        <type>void</type>
-        <definition>void Component::write_binary_particles</definition>
-        <argsstring>(std::ostream *out, int threads, bool real4)</argsstring>
-        <name>write_binary_particles</name>
-        <qualifiedname>Component::write_binary_particles</qualifiedname>
-        <param>
-          <type>std::ostream *</type>
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-        </param>
-        <param>
-          <type>int</type>
-          <declname>threads</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-        </param>
-        <briefdescription>
-<para>Write particles for per-node writes with multithreading. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <type>void</type>
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-        <name>write_binary_mpi</name>
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-        <param>
-          <type>MPI_File &amp;</type>
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-        </param>
-        <param>
-          <type>MPI_Offset &amp;</type>
-          <declname>offset</declname>
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-        <param>
-          <type>bool</type>
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-          <defval>false</defval>
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-        <briefdescription>
-<para>Write binary component phase-space structure using MPI. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="567" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="567" bodyend="573"/>
-        <references refid="class_component_1ae1664414b3245d7ea268603bfa2cd7f9" compoundref="_component_8_h" startline="218">blocking</references>
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-        <qualifiedname>Component::write_ascii</qualifiedname>
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-          <type>ostream *</type>
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-        <param>
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-        <briefdescription>
-<para>Write ascii component phase-space structure. </para>
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-        <briefdescription>
-<para>Redestribute this component. </para>
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-          <type>unsigned</type>
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-        <briefdescription>
-<para>Compute center of mass and center of velocity (CPU version) </para>
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-<para>Compute center of mass and center of velocity. </para>
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-<para>Redistribute particle by list (deprecated?)</para>
-<para>Serialize redistribution list into an integer array of numprocs stanzas, each with the format n <ndash/> current node M <ndash/> number to redistribute (may be zero) index_1 tonode_1 index_2 tonode_2 . . index_M tonode_M</para>
-<para>so each stanza has 2(M+1) integers </para>
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-<para>Subtract mean acceleration from each particle accel. </para>
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-<para>Update angular momentum values. </para>
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-<para>Adiabatic turn on factor, range in [0, 1]. </para>
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-<para>Is particle beyond COM system. </para>
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-<para>Check if particle index is in the component. </para>
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-        <definition>Particle * Component::GetNewPart</definition>
-        <argsstring>()</argsstring>
-        <name>GetNewPart</name>
-        <qualifiedname>Component::GetNewPart</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Generate new particle: this adds a new particle and returns a pointer to the same particle. It is the caller&apos;s responsbility to populate the phase space and particle attributes with sane values. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="669" column="12"/>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a43d296319899e182ef716331ae5d08a6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Component::AddPart</definition>
-        <argsstring>(PartPtr p)</argsstring>
-        <name>AddPart</name>
-        <qualifiedname>Component::AddPart</qualifiedname>
-        <param>
-          <type><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref></type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Add a particle to the component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="672" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1af429f6c5a793b0b7014557c0942e75f4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Component::DestroyPart</definition>
-        <argsstring>(PartPtr p)</argsstring>
-        <name>DestroyPart</name>
-        <qualifiedname>Component::DestroyPart</qualifiedname>
-        <param>
-          <type><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref></type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Remove a particle from the component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="675" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a24fdb356925bd304d6bbdf443317c89f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Component::ErasePart</definition>
-        <argsstring>(PartPtr p)</argsstring>
-        <name>ErasePart</name>
-        <qualifiedname>Component::ErasePart</qualifiedname>
-        <param>
-          <type><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref></type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Erase a particle with no level list check. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="678" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="678" bodyend="682"/>
-        <references refid="class_component_1a22d7ed07f07cf4d97f74494b1f627584" compoundref="_component_8_h" startline="263">nbodies</references>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1ae6619f5e2df2ad8816c4aae756ca66c9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>unsigned</type>
-        <definition>unsigned Component::Number</definition>
-        <argsstring>()</argsstring>
-        <name>Number</name>
-        <qualifiedname>Component::Number</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> vector size. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="685" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="685" bodyend="687"/>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a19a8ac34f26702235706c33b9161e31e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>unsigned</type>
-        <definition>unsigned Component::CurTotal</definition>
-        <argsstring>()</argsstring>
-        <name>CurTotal</name>
-        <qualifiedname>Component::CurTotal</qualifiedname>
-        <briefdescription>
-<para>Return the last particle total (no MPI) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="690" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="690" bodyend="693"/>
-        <references refid="class_component_1a07d7d1f764009209504da8aae2665d44" compoundref="_component_8_h" startline="266">nbodies_tot</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a23c92e334b677f3707fba31455fe05f2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>unsigned</type>
-        <definition>unsigned Component::NewTotal</definition>
-        <argsstring>()</argsstring>
-        <name>NewTotal</name>
-        <qualifiedname>Component::NewTotal</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Update total number of particles in component. Should be called after adding or killing particles. Uses MPI. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="697" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="697" bodyend="702"/>
-        <references refid="class_component_1a25a4a22b1d92953ca839da5b590501af" compoundref="_component_8_h" startline="334">modified</references>
-        <references refid="class_component_1a07d7d1f764009209504da8aae2665d44" compoundref="_component_8_h" startline="266">nbodies_tot</references>
-        <references refid="class_component_1af842f3f884c303ba4d63c3909abba4a6">seq_new_particles</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a5fd7c38d5553346bf9266f691263db1d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Component::Mass</definition>
-        <argsstring>(int i)</argsstring>
-        <name>Mass</name>
-        <qualifiedname>Component::Mass</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <briefdescription>
-<para>Access to mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="705" column="17" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="705" bodyend="711"/>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a994901da4204a29704874b1c1eb44f55" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Component::Pos</definition>
-        <argsstring>(int i, int j, unsigned flags=Inertial)</argsstring>
-        <name>Pos</name>
-        <qualifiedname>Component::Pos</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>j</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>flags</declname>
-          <defval><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref></defval>
-        </param>
-        <briefdescription>
-<para>Access to positions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="714" column="17" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="714" bodyend="724"/>
-        <references refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" compoundref="_component_8_h" startline="408">center</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" compoundref="_component_8_h" startline="355">Centered</references>
-        <references refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" compoundref="_component_8_h" startline="426">com0</references>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" compoundref="_component_8_h" startline="355">Local</references>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a816435a03232966d22ca427874e8dc4a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt; double &gt; Component::getCenter</definition>
-        <argsstring>(unsigned flags=Inertial)</argsstring>
-        <name>getCenter</name>
-        <qualifiedname>Component::getCenter</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>flags</declname>
-          <defval><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref></defval>
-        </param>
-        <briefdescription>
-<para>Get rectified component center. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="727" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="727" bodyend="736"/>
-        <references refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" compoundref="_component_8_h" startline="408">center</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" compoundref="_component_8_h" startline="355">Centered</references>
-        <references refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" compoundref="_component_8_h" startline="426">com0</references>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" compoundref="_component_8_h" startline="355">Local</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a73f9ed983dd632e1714a694a31303214" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Component::Vel</definition>
-        <argsstring>(int i, int j, unsigned flags=Inertial)</argsstring>
-        <name>Vel</name>
-        <qualifiedname>Component::Vel</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>j</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>flags</declname>
-          <defval><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref></defval>
-        </param>
-        <briefdescription>
-<para>Access to velocities. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="739" column="17" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="739" bodyend="747"/>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1a986eae6a0994950d9401462e913dbc9e" compoundref="_component_8_h" startline="426">cov0</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" compoundref="_component_8_h" startline="355">Local</references>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a8d01b4883e90afac5c75019d7123200f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Component::Pos</definition>
-        <argsstring>(double *pos, int i, unsigned flags=Inertial)</argsstring>
-        <name>Pos</name>
-        <qualifiedname>Component::Pos</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>pos</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>flags</declname>
-          <defval><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref></defval>
-        </param>
-        <briefdescription>
-<para>Get positions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="750" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="750" bodyend="760"/>
-        <references refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" compoundref="_component_8_h" startline="408">center</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" compoundref="_component_8_h" startline="355">Centered</references>
-        <references refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" compoundref="_component_8_h" startline="426">com0</references>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" compoundref="_component_8_h" startline="355">Local</references>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1adf9d24409865914ebbd72e60a91eba07" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Component::Vel</definition>
-        <argsstring>(double *vel, int i, unsigned flags=Inertial)</argsstring>
-        <name>Vel</name>
-        <qualifiedname>Component::Vel</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>vel</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>flags</declname>
-          <defval><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref></defval>
-        </param>
-        <briefdescription>
-<para>Get velocities. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="763" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="763" bodyend="772"/>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1a986eae6a0994950d9401462e913dbc9e" compoundref="_component_8_h" startline="426">cov0</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" compoundref="_component_8_h" startline="355">Local</references>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a0d6d65427000e1777ef439d82ee84fac" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Component::ConvertPos</definition>
-        <argsstring>(double *pos, unsigned flags=Local|Centered)</argsstring>
-        <name>ConvertPos</name>
-        <qualifiedname>Component::ConvertPos</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>pos</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>flags</declname>
-          <defval><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>|<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref></defval>
-        </param>
-        <briefdescription>
-<para>Convert coordinates from inertial to local. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="775" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="775" bodyend="781"/>
-        <references refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" compoundref="_component_8_h" startline="408">center</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" compoundref="_component_8_h" startline="355">Centered</references>
-        <references refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" compoundref="_component_8_h" startline="426">com0</references>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" compoundref="_component_8_h" startline="355">Inertial</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" compoundref="_component_8_h" startline="355">Local</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_1a7ca665f88447d50ae31427cdebed4c1d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Component::ConvertVel</definition>
-        <argsstring>(double *vel, unsigned flags=Local|Centered)</argsstring>
-        <name>ConvertVel</name>
-        <qualifiedname>Component::ConvertVel</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>vel</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>flags</declname>
-          <defval><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" kindref="member">Local</ref>|<ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" kindref="member">Centered</ref></defval>
-        </param>
-        <briefdescription>
-<para>Convert velocities from inertial to local. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="784" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="784" bodyend="789"/>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1a986eae6a0994950d9401462e913dbc9e" compoundref="_component_8_h" startline="426">cov0</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" compoundref="_component_8_h" startline="355">Inertial</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04adfdc47aa232375cdff3358c692a87be0" compoundref="_component_8_h" startline="355">Local</references>
-      </memberdef>
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-        <type>void</type>
-        <definition>void Component::PosConvert</definition>
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-        <name>PosConvert</name>
-        <qualifiedname>Component::PosConvert</qualifiedname>
-        <param>
-          <type>double *</type>
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-        <param>
-          <type>unsigned</type>
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-        </param>
-        <briefdescription>
-<para>Convert coordinates from local to inertial. </para>
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-        <inbodydescription>
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-        <references refid="class_component_1a406b3aa2b21a8a194b15f492e0855c0e" compoundref="_component_8_h" startline="408">center</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04aa0c4b70ed4ee10310deae189ed57068e" compoundref="_component_8_h" startline="355">Centered</references>
-        <references refid="class_component_1a31a2e6728c267c50d8e041a5bd2acce6" compoundref="_component_8_h" startline="426">com0</references>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" compoundref="_component_8_h" startline="355">Inertial</references>
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-        <type>void</type>
-        <definition>void Component::VelConvert</definition>
-        <argsstring>(double *vel, unsigned flags=Local|Centered)</argsstring>
-        <name>VelConvert</name>
-        <qualifiedname>Component::VelConvert</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>vel</declname>
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-        <param>
-          <type>unsigned</type>
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-        </param>
-        <briefdescription>
-<para>Convert velocities from local inertial. </para>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="800" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="800" bodyend="805"/>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1a986eae6a0994950d9401462e913dbc9e" compoundref="_component_8_h" startline="426">cov0</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" compoundref="_component_8_h" startline="355">Inertial</references>
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-      </memberdef>
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-        <type>double</type>
-        <definition>double Component::Acc</definition>
-        <argsstring>(int i, int j, unsigned flags=Inertial)</argsstring>
-        <name>Acc</name>
-        <qualifiedname>Component::Acc</qualifiedname>
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-          <type>int</type>
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-        <param>
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-        <param>
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-          <defval><ref refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" kindref="member">Inertial</ref></defval>
-        </param>
-        <briefdescription>
-<para>Access to acceleration. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="808" column="17" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="808" bodyend="816"/>
-        <references refid="class_component_1a10fb714b30dd698643eabd16a19bf7ae" compoundref="_component_8_h" startline="426">acc0</references>
-        <references refid="class_component_1a7430627b74f8a440007f516840e36d36" compoundref="_component_8_h" startline="510">com_system</references>
-        <references refid="class_component_1aa7593bc9dd1f867f0fa8201b48503d04accef68886df9805b1cf4426767bd536d" compoundref="_component_8_h" startline="355">Inertial</references>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
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-        <type>void</type>
-        <definition>void Component::AddPos</definition>
-        <argsstring>(int i, int j, double val)</argsstring>
-        <name>AddPos</name>
-        <qualifiedname>Component::AddPos</qualifiedname>
-        <param>
-          <type>int</type>
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-        <param>
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-        <param>
-          <type>double</type>
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-        <briefdescription>
-<para>Add to position (by component) </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="819" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="819" bodyend="825"/>
-        <references refid="class_component_1a4e10056952a7204727522146c054c3ad" compoundref="_component_8_h" startline="298">particles</references>
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-        <type>void</type>
-        <definition>void Component::AddPos</definition>
-        <argsstring>(int i, double *val)</argsstring>
-        <name>AddPos</name>
-        <qualifiedname>Component::AddPos</qualifiedname>
-        <param>
-          <type>int</type>
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-        <param>
-          <type>double *</type>
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-        <briefdescription>
-<para>Add to position (by array) </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="828" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="828" bodyend="834"/>
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-        <type>void</type>
-        <definition>void Component::AddPos</definition>
-        <argsstring>(int i, vector&lt; double &gt; &amp;val)</argsstring>
-        <name>AddPos</name>
-        <qualifiedname>Component::AddPos</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
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-        <param>
-          <type>vector&lt; double &gt; &amp;</type>
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-        <briefdescription>
-<para>Add to position (by vector) </para>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="837" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="837" bodyend="843"/>
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-        <type>void</type>
-        <definition>void Component::AddVel</definition>
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-        <name>AddVel</name>
-        <qualifiedname>Component::AddVel</qualifiedname>
-        <param>
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-        <param>
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-        <param>
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-        <briefdescription>
-<para>Add to velocity (by component) </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="846" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="846" bodyend="852"/>
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-        <type>void</type>
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-        <name>AddVel</name>
-        <qualifiedname>Component::AddVel</qualifiedname>
-        <param>
-          <type>int</type>
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-        <param>
-          <type>double *</type>
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-        <briefdescription>
-<para>Add to velocity (by array) </para>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="855" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="855" bodyend="861"/>
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-        <type>void</type>
-        <definition>void Component::AddVel</definition>
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-        <name>AddVel</name>
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-        <param>
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-<para>Add to velocity (by vector) </para>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="864" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="864" bodyend="870"/>
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-        <type>void</type>
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-        <argsstring>(int i, int j, double val)</argsstring>
-        <name>AddAcc</name>
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-<para>Add to accerlation (by component) </para>
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-        <references refid="class_component_1acd11e798032a8956ce32a68bebb3264b">getPseudoAccel</references>
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-<para>Add to accerlation (by component) </para>
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-        <detaileddescription>
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-        <type>void</type>
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-        <name>AddAcc</name>
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-        <param>
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-<para>Add to acceleration (by array) </para>
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-<para>Add to acceleration (by array) </para>
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-        <type>void</type>
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-        <type>void</type>
-        <definition>void Component::AddPot</definition>
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-        <param>
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-        <type>void</type>
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-<para>Add to external potential. </para>
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-        <name>reset_level_lists</name>
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-<para>Reset the level lists. </para>
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-        <name>print_level_lists</name>
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-        <param>
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-          <declname>T</declname>
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-<para>Print out the level lists to stdout for diagnostic purposes. </para>
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-        <name>get_time_sofar</name>
-        <qualifiedname>Component::get_time_sofar</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_time" kindref="compound">Time</ref> in potential/force computation so far. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="959" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="959" bodyend="959"/>
-        <references refid="class_timer_1a490604efc23a4ff9bef8d1f9f418ecb2" compoundref="_timer_8_h" startline="75" endline="84">Timer::getTime</references>
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-        <name>Indexing</name>
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-<para>Check for indexing. </para>
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-        <name>NoSwitch</name>
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-        <briefdescription>
-<para>Check for multistep restriction (this is still a test option) </para>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="965" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="965" bodyend="965"/>
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-        <type>bool</type>
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-        <name>FreezeLev</name>
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-<para>Only compute new levels on first step. </para>
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-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="968" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="968" bodyend="968"/>
-        <references refid="class_component_1a57f50109123aeb28f75cfcd246b4fc5d" compoundref="_component_8_h" startline="340">freezeLev</references>
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-        <briefdescription>
-<para>Compute level from minimum requested time step from last master step. </para>
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-        <references refid="class_component_1a5b813abde55037d8602654e91de7a029" compoundref="_component_8_h" startline="343">dtreset</references>
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-        <name>PSTYPE</name>
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-          <name>Inertial</name>
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-          </detaileddescription>
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-        <briefdescription>
-<para>Describe the phase space coordinates. </para>
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-        <inbodydescription>
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-<para>For magic number checking. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <type>bool</type>
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-        <type>bool</type>
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-        <inbodydescription>
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-        <type>vector&lt; double &gt;</type>
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-        <type>bool</type>
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-<para>Using blocking writes for MPI-IO. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="218" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="218" bodyend="-1"/>
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-        <type>vector&lt; double &gt;</type>
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-        <type>vector&lt; double &gt;</type>
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-        <name>indexing</name>
-        <qualifiedname>Component::indexing</qualifiedname>
-        <briefdescription>
-<para>Internal data for sequence checking. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="210" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="210" bodyend="-1"/>
-        <referencedby refid="class_component_1ad7163ba3c111852a417bdfb17c1f1687" compoundref="_component_8_h" startline="962" endline="962">Indexing</referencedby>
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-      <memberdef kind="variable" id="class_component_1a9ad99070adeeb7971901635aa2013e5a" prot="private" static="no" mutable="no">
-        <type>vector&lt; <ref refid="structloadb__datum" kindref="compound">loadb_datum</ref> &gt;</type>
-        <definition>vector&lt;loadb_datum&gt; Component::loadb</definition>
-        <argsstring></argsstring>
-        <name>loadb</name>
-        <qualifiedname>Component::loadb</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="232" column="11" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="232" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1aca5c58f9c056a5d60d5692ce1ce71f4e" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref> &gt;</type>
-        <definition>std::vector&lt;PartPtr&gt; Component::pbuf</definition>
-        <argsstring></argsstring>
-        <name>pbuf</name>
-        <qualifiedname>Component::pbuf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="225" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="225" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1a2f707ca7734eb83160c351bc8769540d" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::pBufSiz</definition>
-        <argsstring></argsstring>
-        <name>pBufSiz</name>
-        <qualifiedname>Component::pBufSiz</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> buffer count for MPI-IO writing. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="215" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="215" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1abcdcae11fcf83308c9c94b8c2f25955a" prot="private" static="no" mutable="no">
-        <type><ref refid="_particle_ferry_8_h_1aaccf181b89a271f9a3cf718cf1ef244b" kindref="member">ParticleFerryPtr</ref></type>
-        <definition>ParticleFerryPtr Component::pf</definition>
-        <argsstring></argsstring>
-        <name>pf</name>
-        <qualifiedname>Component::pf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="245" column="20" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="245" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1a8cbb0989bfa18c481de6b75d54c02a6f" prot="private" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned Component::rsize</definition>
-        <argsstring></argsstring>
-        <name>rsize</name>
-        <qualifiedname>Component::rsize</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="205" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="205" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int Component::seq_beg</definition>
-        <argsstring></argsstring>
-        <name>seq_beg</name>
-        <qualifiedname>Component::seq_beg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="211" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="211" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1ab039da822ceb6544306bcd4a133b9c4b" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::seq_cur</definition>
-        <argsstring></argsstring>
-        <name>seq_cur</name>
-        <qualifiedname>Component::seq_cur</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="211" column="23" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="211" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1a4366b72faa2eaae1f3c34dfc94186914" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::seq_end</definition>
-        <argsstring></argsstring>
-        <name>seq_end</name>
-        <qualifiedname>Component::seq_end</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="211" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="211" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1a8639cd64f886227fb3ee528fe9b6c8ec" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Component::tidal</definition>
-        <argsstring></argsstring>
-        <name>tidal</name>
-        <qualifiedname>Component::tidal</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="242" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="242" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1a538b531d42111fa6d299d97936657f61" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::toff</definition>
-        <argsstring></argsstring>
-        <name>toff</name>
-        <qualifiedname>Component::toff</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="229" column="14" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="229" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_1a121955a595a394fe2b726fd503247d56" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::ton</definition>
-        <argsstring></argsstring>
-        <name>ton</name>
-        <qualifiedname>Component::ton</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="229" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="229" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1a2b03543a52bf5e0333d180d87ba35084" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Component::twid</definition>
-        <argsstring></argsstring>
-        <name>twid</name>
-        <qualifiedname>Component::twid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="229" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="229" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_1a49ec95ffe08a0d63888d8287f6b00e80" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Component::umagic</definition>
-        <argsstring></argsstring>
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-        <qualifiedname>Component::umagic</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="210" column="24" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="210" bodyend="-1"/>
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-    </sectiondef>
-    <sectiondef kind="protected-attrib">
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-        <type>double</type>
-        <definition>double Component::azcm_slab</definition>
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-        <name>azcm_slab</name>
-        <qualifiedname>Component::azcm_slab</qualifiedname>
-        <briefdescription>
-<para>Slab parameters. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="260" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="260" bodyend="-1"/>
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-        <type>bool</type>
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-        <name>binary</name>
-        <qualifiedname>Component::binary</qualifiedname>
-        <briefdescription>
-<para>Binary read flag. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="286" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="286" bodyend="-1"/>
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-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
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-        <argsstring></argsstring>
-        <name>c0</name>
-        <qualifiedname>Component::c0</qualifiedname>
-        <briefdescription>
-<para>Use center from this component. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="304" column="13" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="304" bodyend="-1"/>
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-        <type>std::shared_ptr&lt; <ref refid="class_center_file" kindref="compound">CenterFile</ref> &gt;</type>
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-        <name>CF</name>
-        <qualifiedname>Component::CF</qualifiedname>
-        <briefdescription>
-<para>Center file playback. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="313" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="313" bodyend="-1"/>
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-        <name>com_restart</name>
-        <qualifiedname>Component::com_restart</qualifiedname>
-        <briefdescription>
-<para>COM flag. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="292" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="292" bodyend="-1"/>
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-        <type>string</type>
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-        <name>comfile</name>
-        <qualifiedname>Component::comfile</qualifiedname>
-        <briefdescription>
-<para>COM log file. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="289" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="289" bodyend="-1"/>
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-        <type>std::string</type>
-        <definition>std::string Component::ctr_name</definition>
-        <argsstring></argsstring>
-        <name>ctr_name</name>
-        <qualifiedname>Component::ctr_name</qualifiedname>
-        <briefdescription>
-<para>Name of the centering component. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="310" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="310" bodyend="-1"/>
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-        <type>bool</type>
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-        <qualifiedname>Component::dtreset</qualifiedname>
-        <briefdescription>
-<para>Select level from criteria over last time step. </para>
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-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="343" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="343" bodyend="-1"/>
-        <referencedby refid="class_component_1adfd3e79be5e73a392be319041fe160d5" compoundref="_component_8_h" startline="971" endline="971">DTreset</referencedby>
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-        <type>bool</type>
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-        <name>freezeLev</name>
-        <qualifiedname>Component::freezeLev</qualifiedname>
-        <briefdescription>
-<para>Compute new levels on the first step only. </para>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="340" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="340" bodyend="-1"/>
-        <referencedby refid="class_component_1a068c346d13114d0212d4003494e3cc5e" compoundref="_component_8_h" startline="968" endline="968">FreezeLev</referencedby>
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-        <type>unsigned</type>
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-        <name>modified</name>
-        <qualifiedname>Component::modified</qualifiedname>
-        <initializer>=0</initializer>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> number update is needed. </para>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="334" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="334" bodyend="-1"/>
-        <referencedby refid="class_component_1a23c92e334b677f3707fba31455fe05f2" compoundref="_component_8_h" startline="697" endline="702">NewTotal</referencedby>
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-        <type>unsigned int</type>
-        <definition>unsigned int Component::nbodies</definition>
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-        <qualifiedname>Component::nbodies</qualifiedname>
-        <briefdescription>
-<para>Bodies on this node. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="263" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="263" bodyend="-1"/>
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-        <qualifiedname>Component::nbodies_index</qualifiedname>
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-        <detaileddescription>
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-        <argsstring></argsstring>
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-        <qualifiedname>Component::nbodies_table</qualifiedname>
-        <briefdescription>
-<para>Vector holding current particle partition. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="277" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="277" bodyend="-1"/>
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-        <argsstring></argsstring>
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-        <qualifiedname>Component::nbodies_tot</qualifiedname>
-        <briefdescription>
-<para>Bodies on all nodes. </para>
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-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="266" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="266" bodyend="-1"/>
-        <referencedby refid="class_component_1a19a8ac34f26702235706c33b9161e31e" compoundref="_component_8_h" startline="690" endline="693">CurTotal</referencedby>
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-        <name>new_particles</name>
-        <qualifiedname>Component::new_particles</qualifiedname>
-        <briefdescription>
-<para>Particles waiting for a new index. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="325" column="13" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="325" bodyend="-1"/>
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-<para>No multistep switching. </para>
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-<para>Vectors for holding the rates per node for load balancing. </para>
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-<para>Used by gather and distribution routines to define a particle structure to MPI </para>
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-<para>Valid keys for YAML configurations. </para>
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-        <type>Eigen::Vector3d</type>
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-<para>Pseudo-accleration (set by <ref refid="class_orient" kindref="compound">Orient</ref>) </para>
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-        <type>double *</type>
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-<para>Angular momentum vector. </para>
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-        <type>YAML::Node</type>
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-<para>Parameters for component. </para>
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-        <type>double *</type>
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-        <qualifiedname>Component::center</qualifiedname>
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-<para>Center (e.g. set by <ref refid="class_orient" kindref="compound">Orient</ref>) </para>
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-        <qualifiedname>Component::coa</qualifiedname>
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-<para>Center of acceleration. </para>
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-<para>Center of mass. </para>
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-<para>These are pointers to the center of mass, center of velocity, angular momentum and the phase-space 6 vector. </para>
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-<para>Configuration for this component. </para>
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-<para>Center of velocity. </para>
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-<para>Periodic cube. </para>
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-        <type>bool</type>
-        <definition>bool Component::disk</definition>
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-<para>Cylindrical geometry. </para>
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-        <type>YAML::Node</type>
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-        <briefdescription>
-<para>Parameters for force. </para>
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-        <definition>std::string Component::id</definition>
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-        <name>id</name>
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-<para>Force method. </para>
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-        <type>int</type>
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-        <briefdescription>
-<para>Species key position in particle integer attribute vector. </para>
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-        <type>std::string</type>
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-        <name>name</name>
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-<para>Identify this component. </para>
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-        </inbodydescription>
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-        <referencedby refid="class_cube_1_1exe_timer_1a6a72d798de758a187cdc1efe342cf444" compoundref="_cube_8_h" startline="124" endline="145">Cube::exeTimer::~exeTimer</referencedby>
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-      <memberdef kind="variable" id="class_component_1ad9a27a7905f54546255235a4e1cd9a97" prot="public" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
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-      <memberdef kind="variable" id="class_component_1a51311b5b0fbdb97cb01e9f2792e90986" prot="public" static="no" mutable="no">
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-        <name>pfile</name>
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-<para><ref refid="class_particle" kindref="compound">Particle</ref> file. </para>
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-        <type>bool</type>
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-<para>Point masses. </para>
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-        </inbodydescription>
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-      <memberdef kind="variable" id="class_component_1a7e0f896103c3cb72a4692b15709e7ac7" prot="public" static="no" mutable="no">
-        <type>double *</type>
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-        <name>ps</name>
-        <qualifiedname>Component::ps</qualifiedname>
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-<para><ref refid="class_phase" kindref="compound">Phase</ref> space vector. </para>
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-        </detaileddescription>
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-        </inbodydescription>
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-        <type>Eigen::Vector3d</type>
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-      <memberdef kind="variable" id="class_component_1a1c763b2219a18372ec35c0b45b40c91b" prot="public" static="no" mutable="no">
-        <type>double</type>
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-<para>Maximum initial particle radius. </para>
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-        </inbodydescription>
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-        <type>bool</type>
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-<para>Slab geometry. </para>
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-        </inbodydescription>
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-        <type>bool</type>
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-<para>Spherical geometry. </para>
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-        <param>
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-        <param>
-          <type>std::vector&lt; <ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref> &gt; &amp;</type>
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-        <param>
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-<para>Parallel distribute and particle io. </para>
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-        <param>
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-<para>Helper for split-PSP-file particle consumer. </para>
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-<para>Locagte centering component. </para>
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-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Write binary component phase-space structure using MPI (non-blocking) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="319" column="8"/>
-        <referencedby refid="class_component_1a3f7535f624689936b9230437ccf716f6" compoundref="_component_8_h" startline="567" endline="573">write_binary_mpi</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_component_1acd11e798032a8956ce32a68bebb3264b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::Vector3d &amp;</type>
-        <definition>Eigen::Vector3d &amp; Component::getPseudoAccel</definition>
-        <argsstring>(double *pos, double *vel)</argsstring>
-        <name>getPseudoAccel</name>
-        <qualifiedname>Component::getPseudoAccel</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>pos</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>vel</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="418" column="19"/>
-        <referencedby refid="class_component_1a7b3e043e1326d33dc24e929b71256e10" compoundref="_component_8_h" startline="892" endline="900">AddAcc</referencedby>
-        <referencedby refid="class_component_1acd2f2abc50bff4863a8c5c094f53a9f4" compoundref="_component_8_h" startline="873" endline="880">AddAcc</referencedby>
-        <referencedby refid="class_component_1a9ce743bf55de9d8279d9654b136cc771" compoundref="_component_8_h" startline="912" endline="920">AddAcc</referencedby>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Class associating the phase space with a biorthogonal basis. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>The <ref refid="class_component" kindref="compound">Component</ref> provides &quot;interactors&quot; for specific particle fields <linebreak/>
- Each field in the <ref refid="class_component" kindref="compound">Component</ref> config file format contains four fields, each delimited by a colon (&quot;:&quot;), and new lines are not significant: <linebreak/>
- <orderedlist>
-<listitem>
-<para>name of the potential solver (force methods) for this phase space </para>
-</listitem>
-<listitem>
-<para>component-specific parameters [see Parameter section below] </para>
-</listitem>
-<listitem>
-<para>file name containing phase space to be read </para>
-</listitem>
-<listitem>
-<para>comma-delimited parameter list passed to the potential solver </para>
-</listitem>
-</orderedlist>
-<linebreak/>
- Currently available force methods: <simplesect kind="par"><title>bessel </title><para>Bessel function basis, see <ref refid="class_bessel" kindref="compound">Bessel</ref></para>
-</simplesect>
-<simplesect kind="par"><title>sphereSL </title><para>Weinberg&apos;s adaptive spherical basis derived by numerical solution to the Sturm-Liouville equation, see <ref refid="class_sphere" kindref="compound">Sphere</ref></para>
-</simplesect>
-<simplesect kind="par"><title>cube </title><para>Trigonmetric basis with periodic boundaries, see <ref refid="class_cube" kindref="compound">Cube</ref></para>
-</simplesect>
-<simplesect kind="par"><title>slabSL </title><para>Trigonmetric basis with periodic boundaries the horizontal directions and vacuum boundary conditions in the vertical dirction, see Slab</para>
-</simplesect>
-<simplesect kind="par"><title>slab </title><para>Trigonmetric basis with periodic boundaries the horizontal directions and vacuum boundary conditions in the vertical dirction based on a direct solution of the Sturm-Liouville equation perpendicular to the slab, see <ref refid="class_slab_s_l" kindref="compound">SlabSL</ref></para>
-</simplesect>
-<simplesect kind="par"><title>cylinder </title><para>Weinberg&apos;s adaptive cylindrical basis derived by numerical solution to the Sturm-Liouville equation, see <ref refid="class_cylinder" kindref="compound">Cylinder</ref></para>
-</simplesect>
-<simplesect kind="par"><title>direct</title><para>The usual n<superscript>2</superscript> force calculation, see <ref refid="class_direct" kindref="compound">Direct</ref></para>
-</simplesect>
-<simplesect kind="par"><title>noforce</title><para>No force (presumably, you are supplying your own force)</para>
-</simplesect>
-<parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>EJ</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>enables energy weighed center-of-mass. The paramter value is a two-bit flag: AXIS=1 and CENTER=2.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nEJkeep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of time steps in running box car average for EJ-determined parameters</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nEJwant</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the target number of particles to keep in the ensemble used to determine the paramters. The energy cutoff is dynamically adjusted to achieve this target.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nEJwant</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the size of the past states used to estimate the the acceleration of the expansion frame</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJx0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the initial EJ center x-coordinate (default: 0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJy0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the initial EJ center y-coordinate (default: 0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJz0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the initial EJ center z-coordinate (default: 0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJu0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the initial EJ center u-velocity (default: 0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJv0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the initial EJ center v-velocity (default: 0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJw0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the initial EJ center w-velocity (default: 0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJdT</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the spacing in time between samples (default: 0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJkinE</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set true includes kinetic energy in the energy determination, otherwise potential energy alone is used</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJext</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set true includes the external potential energy in the energy computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJdiag</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>turns on verbose EJ reporting</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJdryrun</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true does not apply EJ centering or rotation but computes the transformation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJlinear</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set true moves center with constant velocity. For testing only!! (default: false)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EJdamp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>multiplies the least squares slope to prevent instability (default: 1.0, no damping)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radius particle. This is determined dynamically from the initial conditions but can be overridden as a parameter.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rtrunc</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radius from the <computeroutput>center</computeroutput> beyond which it does not contribute to the force expansion (but does continues to be affected by it). The default value is <computeroutput>1.0e20</computeroutput>.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rcom</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radius beyond which a particle is not used to compute the center of mass coordinate system</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ton</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the midpoint of the adiabatic turn on for this component</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>twid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the width for the adiabatic turn on. Unless <computeroutput>ton</computeroutput> or <computeroutput>toff</computeroutput> is specified, the component begins and remains fully on.</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-<linebreak/>
- Reference frames: <orderedlist>
-<listitem>
-<para><emphasis>Inertial</emphasis> is the rest reference frame whose coordinate system is centered at (0, 0, 0)</para>
-<para></para>
-</listitem>
-<listitem>
-<para><emphasis>Local</emphasis> is the coordinate system of specific to the particles of an individual <ref refid="class_component" kindref="compound">Component</ref> instance. If com_system is defined, this is defined to have its origin at the center of mass and the center of velocity of the component&apos;s partcles at all times. If <computeroutput>com_system</computeroutput> is off, this is the same as <emphasis>Inertial</emphasis></para>
-<para></para>
-</listitem>
-<listitem>
-<para><emphasis>Centered</emphasis> offsets the particles coordinates using the current centering scheme for the expansion. At this point, this is the EJ method selectable by the user. The SphereTwoCenter method indirectly manipulates this to achieve two separate expansion centers.</para>
-<para></para>
-</listitem>
-<listitem>
-<para><emphasis>keyPos</emphasis> is the value of the species key in the particle integer attribute vector</para>
-<para></para>
-</listitem>
-<listitem>
-<para><emphasis>pbufsiz</emphasis> is the number of particles in each particle buffer sent to disk when using MPI-IO with <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref></para>
-<para></para>
-</listitem>
-<listitem>
-<para><emphasis>blocking</emphasis> set to true chooses blocking writes when using MPI-IO with <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref></para>
-<para></para>
-</listitem>
-<listitem>
-<para><emphasis>buffered</emphasis> set to true chooses buffered writes when using POSIX binary</para>
-<para></para>
-</listitem>
-<listitem>
-<para><emphasis>ignore</emphasis> the <ref refid="class_p_s_p" kindref="compound">PSP</ref> info stanza on restart (i.e. for specifying alternative parameters, using an old-style <ref refid="class_p_s_p" kindref="compound">PSP</ref> file, or starting a new job with a previous output from another simulation) </para>
-</listitem>
-</orderedlist>
-</para>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="1">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="1" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="2" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="4">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="1" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="3">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/Component.H" line="180" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="181" bodyend="1099"/>
-    <listofallmembers>
-      <member refid="class_component_1ab070226049c137d9b084dec0e562118d" prot="public" virt="non-virtual"><scope>Component</scope><name>Acc</name></member>
-      <member refid="class_component_1a10fb714b30dd698643eabd16a19bf7ae" prot="public" virt="non-virtual"><scope>Component</scope><name>acc0</name></member>
-      <member refid="class_component_1a53f0cec40309de5806d1c424c501b6c5" prot="public" virt="non-virtual"><scope>Component</scope><name>accel</name></member>
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-      <member refid="class_component_1a49ec95ffe08a0d63888d8287f6b00e80" prot="private" virt="non-virtual"><scope>Component</scope><name>umagic</name></member>
-      <member refid="class_component_1afbb4b82f97e24f031c1cb582d113cd4c" prot="public" virt="non-virtual"><scope>Component</scope><name>update_accel</name></member>
-      <member refid="class_component_1a2b384ffd4af26c5ff1ae3258f00e6580" prot="private" virt="non-virtual"><scope>Component</scope><name>update_indices</name></member>
-      <member refid="class_component_1aa1914644c9c535d396fcd363068ed8ea" prot="protected" virt="non-virtual"><scope>Component</scope><name>valid_keys_force</name></member>
-      <member refid="class_component_1a3bce97dc5d9e0251e5a4c6d21b919120" prot="protected" virt="non-virtual"><scope>Component</scope><name>valid_keys_parm</name></member>
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diff --git a/doxyxml/class_component_container.xml b/doxyxml/class_component_container.xml
deleted file mode 100644
index b39eb06..0000000
--- a/doxyxml/class_component_container.xml
+++ /dev/null
@@ -1,933 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_component_container" kind="class" language="C++" prot="public">
-    <compoundname>ComponentContainer</compoundname>
-    <includes refid="_component_container_8_h" local="no">ComponentContainer.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="enum" id="class_component_container_1ac5de36088d5cfd68516b056f46b18d86" prot="public" static="no" strong="no">
-        <type></type>
-        <name>State</name>
-        <qualifiedname>ComponentContainer::State</qualifiedname>
-        <enumvalue id="class_component_container_1ac5de36088d5cfd68516b056f46b18d86a322197b290ac25edfae25a1d1d293bab" prot="public">
-          <name>NONE</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_component_container_1ac5de36088d5cfd68516b056f46b18d86a9ead8675067850a5ab8b0183a9ac8ec4" prot="public">
-          <name>SELF</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_component_container_1ac5de36088d5cfd68516b056f46b18d86af8c3a9942f6dfbb39b4382077f8e8250" prot="public">
-          <name>INTERACTION</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_component_container_1ac5de36088d5cfd68516b056f46b18d86a0fbd369362af03f477b608fa56d1685f" prot="public">
-          <name>EXTERNAL</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-<para>For timers in PotAcc to hook the type of acceleration. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-    <sectiondef kind="friend">
-      <memberdef kind="friend" id="class_component_container_1a90717717700965c100968cff0188e244" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>class</type>
-        <definition>friend class Component</definition>
-        <argsstring></argsstring>
-        <name>Component</name>
-        <qualifiedname>ComponentContainer::Component</qualifiedname>
-        <param>
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-        </param>
-        <briefdescription>
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-        <type>bool</type>
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-        <argsstring></argsstring>
-        <name>binary</name>
-        <qualifiedname>ComponentContainer::binary</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-      <memberdef kind="variable" id="class_component_container_1aeb325f1f94c01483ba3224f26263656e" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double* ComponentContainer::gcom1</definition>
-        <argsstring></argsstring>
-        <name>gcom1</name>
-        <qualifiedname>ComponentContainer::gcom1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/ComponentContainer.H" line="67" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ComponentContainer.H" bodystart="67" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_component_container_1a869151b5696d2514fac5a4174d38e0ce" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double * ComponentContainer::gcov1</definition>
-        <argsstring></argsstring>
-        <name>gcov1</name>
-        <qualifiedname>ComponentContainer::gcov1</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <type>bool</type>
-        <definition>bool ComponentContainer::gottapot</definition>
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-        <name>gottapot</name>
-        <qualifiedname>ComponentContainer::gottapot</qualifiedname>
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-        <qualifiedname>ComponentContainer::ifile</qualifiedname>
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-        <type>vector&lt; unsigned &gt;</type>
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-<para>Counts steps at each level for timing output. </para>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>time0</name>
-        <qualifiedname>ComponentContainer::time0</qualifiedname>
-        <briefdescription>
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-        <type>const std::set&lt; std::string &gt;</type>
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-        <name>valid_keys</name>
-        <qualifiedname>ComponentContainer::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
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-<para>Number of components. </para>
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-<para>Processor rates. </para>
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-        <definition>Timer ComponentContainer::timer_fixp</definition>
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-        <name>timer_fixp</name>
-        <qualifiedname>ComponentContainer::timer_fixp</qualifiedname>
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-        <definition>Timer ComponentContainer::timer_force</definition>
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-        <name>timer_force</name>
-        <qualifiedname>ComponentContainer::timer_force</qualifiedname>
-        <briefdescription>
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-        <definition>Timer ComponentContainer::timer_gcom</definition>
-        <argsstring></argsstring>
-        <name>timer_gcom</name>
-        <qualifiedname>ComponentContainer::timer_gcom</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <definition>Timer ComponentContainer::timer_inter</definition>
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-        <name>timer_inter</name>
-        <qualifiedname>ComponentContainer::timer_inter</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <type><ref refid="class_timer" kindref="compound">Timer</ref></type>
-        <definition>Timer ComponentContainer::timer_orient</definition>
-        <argsstring></argsstring>
-        <name>timer_orient</name>
-        <qualifiedname>ComponentContainer::timer_orient</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <definition>Timer ComponentContainer::timer_posn</definition>
-        <argsstring></argsstring>
-        <name>timer_posn</name>
-        <qualifiedname>ComponentContainer::timer_posn</qualifiedname>
-        <briefdescription>
-<para>Performance timers (enabled with VERBOSE&gt;3) </para>
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-        <inbodydescription>
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-        <type>vector&lt; pair&lt; string, <ref refid="class_timer" kindref="compound">Timer</ref> &gt; &gt;</type>
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-        <name>timer_sext</name>
-        <qualifiedname>ComponentContainer::timer_sext</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <type>vector&lt; pair&lt; string, <ref refid="class_timer" kindref="compound">Timer</ref> &gt; &gt;</type>
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-        <name>timer_sntr</name>
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-        <briefdescription>
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-        <definition>Timer ComponentContainer::timer_thr_acc</definition>
-        <argsstring></argsstring>
-        <name>timer_thr_acc</name>
-        <qualifiedname>ComponentContainer::timer_thr_acc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        </inbodydescription>
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-        <definition>Timer ComponentContainer::timer_thr_ext</definition>
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-        <name>timer_thr_ext</name>
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-        <briefdescription>
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-        </inbodydescription>
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-        <definition>Timer ComponentContainer::timer_thr_int</definition>
-        <argsstring></argsstring>
-        <name>timer_thr_int</name>
-        <qualifiedname>ComponentContainer::timer_thr_int</qualifiedname>
-        <briefdescription>
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-        </inbodydescription>
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-        <definition>Timer ComponentContainer::timer_wait</definition>
-        <argsstring></argsstring>
-        <name>timer_wait</name>
-        <qualifiedname>ComponentContainer::timer_wait</qualifiedname>
-        <briefdescription>
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-        </inbodydescription>
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-        <definition>Timer ComponentContainer::timer_zero</definition>
-        <argsstring></argsstring>
-        <name>timer_zero</name>
-        <qualifiedname>ComponentContainer::timer_zero</qualifiedname>
-        <briefdescription>
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-        </inbodydescription>
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-        <type>bool</type>
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-        <name>timing</name>
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-<para>Timing in use. </para>
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-        </inbodydescription>
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-        <name>tinterval</name>
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-<para>Seconds between timer dumps. </para>
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-        </inbodydescription>
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-<para>Debug for bad phase space values. </para>
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-        <name>ComponentContainer</name>
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-<para>Constructor. </para>
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-        <inbodydescription>
-        </inbodydescription>
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-        <param>
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-<para>Compute the expansion for all components in the container Those without expansions, should return without working </para>
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-          <defval>0</defval>
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-<para>Compute the acceleration for all components in the container. </para>
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-        <briefdescription>
-<para>Remove the center of mass accelration from the overall phase space. </para>
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-<para>Recompute the center of mass and centers of velocity for all components. These may be used (if flagged) to center the phase space on each grid either globally or per component </para>
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-        <name>initialize</name>
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-<para>Read database and construct indvidual components. </para>
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-<para>Compute duty for each processor and initiate load balancing. </para>
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-<para>Print debug info. </para>
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-<para>Reset data before a multistep step. </para>
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-        <type>void</type>
-        <definition>void ComponentContainer::print_level_list_header</definition>
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-        <name>print_level_list_header</name>
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-<para>Print column explanation for level lists output. </para>
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-        <type>void</type>
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-        <param>
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-<para>Print out the level lists for all components to stdout for diagnostic purposes </para>
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-        <briefdescription>
-<para>Read initial processor rates. </para>
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-        </inbodydescription>
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-        <type>void</type>
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-<para>Diagnostic report of number from each component and process. </para>
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-        <name>~ComponentContainer</name>
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-<para>Destructor. </para>
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-        <detaileddescription>
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-        <inbodydescription>
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-    <briefdescription>
-<para>A container for all phase-space components. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>There are two parameters affecting ComponentContainter, which may be specified in the global stanza:</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>restart</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to 1 instructs all the components and force methods to restart the simulation from phase space checkpoints and log files</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-<linebreak/>
- Restarting:</para>
-<para>If the <emphasis>infile</emphasis> parameter contains a valid <ref refid="class_p_s_p" kindref="compound">PSP</ref> file name, the simulation will resume using the file as an <ref refid="class_p_s_p" kindref="compound">PSP</ref> body file. If the <emphasis>infile</emphasis> begins with or contains the string &apos;SPL&apos;, a split-PSP format will be assumed. </para>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="1">
-        <label>ComponentContainer</label>
-        <link refid="class_component_container"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>timer_accel</edgelabel>
-          <edgelabel>timer_angmom</edgelabel>
-          <edgelabel>timer_clock</edgelabel>
-          <edgelabel>timer_cuda</edgelabel>
-          <edgelabel>timer_expand</edgelabel>
-          <edgelabel>timer_extrn</edgelabel>
-          <edgelabel>timer_fixp</edgelabel>
-          <edgelabel>timer_force</edgelabel>
-          <edgelabel>timer_gcom</edgelabel>
-          <edgelabel>timer_inter</edgelabel>
-          <edgelabel>...</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/ComponentContainer.H" line="57" column="1" bodyfile="/home/weinberg/Projects/EXP/src/ComponentContainer.H" bodystart="58" bodyend="167"/>
-    <listofallmembers>
-      <member refid="class_component_container_1ac5d29ab1c974cf3463f11387f279a690" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>bad_values</name></member>
-      <member refid="class_component_container_1a44ad91b15237774f0e4239611dd96848" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>binary</name></member>
-      <member refid="class_component_container_1a90717717700965c100968cff0188e244" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>Component</name></member>
-      <member refid="class_component_container_1a6c12392bc2fe8a6629af67515b84f07e" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>ComponentContainer</name></member>
-      <member refid="class_component_container_1add42db02d8c0869c2d2c697de31051b2" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>components</name></member>
-      <member refid="class_component_container_1aea1f6e17d4e6f19c6f4171bd50ef892c" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>compute_expansion</name></member>
-      <member refid="class_component_container_1a09ca3e641b3b32296872e02cb7890b54" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>compute_potential</name></member>
-      <member refid="class_component_container_1ac5de36088d5cfd68516b056f46b18d86a0fbd369362af03f477b608fa56d1685f" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>EXTERNAL</name></member>
-      <member refid="class_component_container_1a3beee4581ad3ccef3a53f4446e72a46e" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>fix_acceleration</name></member>
-      <member refid="class_component_container_1a1367d13fca097001917ccbc6cf52e06e" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>fix_positions</name></member>
-      <member refid="class_component_container_1aeb325f1f94c01483ba3224f26263656e" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>gcom1</name></member>
-      <member refid="class_component_container_1a869151b5696d2514fac5a4174d38e0ce" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>gcov1</name></member>
-      <member refid="class_component_container_1a109d9180d2063add2dc7ec186c71b3b3" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>gottapot</name></member>
-      <member refid="class_component_container_1aacafe04a76ab22fdeaa3c1d39f706735" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>ifile</name></member>
-      <member refid="class_component_container_1a465c9617d0a6662b74e5abbac1a2497a" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>initialize</name></member>
-      <member refid="class_component_container_1ac5de36088d5cfd68516b056f46b18d86af8c3a9942f6dfbb39b4382077f8e8250" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>INTERACTION</name></member>
-      <member refid="class_component_container_1a38fe2ad1bc9d883b9ba85f708a8d46ba" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>interaction</name></member>
-      <member refid="class_component_container_1a31664ca5677fd3f2825450de973fb5e2" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>levcnt</name></member>
-      <member refid="class_component_container_1ad30a09c57fb3e3e286ff27245237e1fc" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>load_balance</name></member>
-      <member refid="class_component_container_1acb9f232d7050e4f549ba5930a9fa0d79" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>multistep_debug</name></member>
-      <member refid="class_component_container_1a512225ab116025f9f5296f118aa2e180" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>multistep_reset</name></member>
-      <member refid="class_component_container_1ace53fce3e9cf82f626cab6852ba041ba" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>ncomp</name></member>
-      <member refid="class_component_container_1ac5de36088d5cfd68516b056f46b18d86a322197b290ac25edfae25a1d1d293bab" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>NONE</name></member>
-      <member refid="class_component_container_1ae1cc051885b8ee9bd14f512596f9baa0" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>ntot</name></member>
-      <member refid="class_component_container_1a73154b0b8ae2c31864ee6d3b1516b110" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>print_level_list_header</name></member>
-      <member refid="class_component_container_1aedc46c63773555bf85a655df09f228ef" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>print_level_lists</name></member>
-      <member refid="class_component_container_1a4238fbcab76a4cd1afe7fc501076ef2f" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>rates</name></member>
-      <member refid="class_component_container_1a60cf3d818dfad83fcbd82fc1f1cf627f" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>read_rates</name></member>
-      <member refid="class_component_container_1ac0730ed7ad40469efdf9f5a9fdfd73d7" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>report_numbers</name></member>
-      <member refid="class_component_container_1ac5de36088d5cfd68516b056f46b18d86a9ead8675067850a5ab8b0183a9ac8ec4" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>SELF</name></member>
-      <member refid="class_component_container_1ac5de36088d5cfd68516b056f46b18d86" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>State</name></member>
-      <member refid="class_component_container_1ada517db51cb28f64f9c21128a76aea35" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>state</name></member>
-      <member refid="class_component_container_1af93f8b316e0c939a9261924337114d99" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>thread_timing</name></member>
-      <member refid="class_component_container_1aa2ea31710c055e855b1d72ed429046a4" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>time0</name></member>
-      <member refid="class_component_container_1aaa22ab67954b80f4c6ee6f7d9636d640" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_accel</name></member>
-      <member refid="class_component_container_1aae76106c43e521ac5df780aed32c8c92" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_angmom</name></member>
-      <member refid="class_component_container_1ab00f156f0f524a626e9837dc726d4457" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_clock</name></member>
-      <member refid="class_component_container_1a473b65d9a5f5b86f982e16b611e7d745" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_cuda</name></member>
-      <member refid="class_component_container_1a9f9906c50909d7a76b58b2c1105fc56b" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_expand</name></member>
-      <member refid="class_component_container_1a2580b406936c1b407b0afdafe31aaa90" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_extrn</name></member>
-      <member refid="class_component_container_1a66fa64459bbfd955061de103e966bd78" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_fixp</name></member>
-      <member refid="class_component_container_1a55e83b7f307918dcd12d8dffd345a97a" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_force</name></member>
-      <member refid="class_component_container_1ad04ae7aeb964aea832262d138faa5e0a" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_gcom</name></member>
-      <member refid="class_component_container_1aca9d4b811b77ed76e722130528e96355" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_inter</name></member>
-      <member refid="class_component_container_1a4808de83ed1e7b93cfa2ab1452656f37" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_orient</name></member>
-      <member refid="class_component_container_1ab4521ee1a85b0a6ac5b27e2f2c04873f" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_posn</name></member>
-      <member refid="class_component_container_1a1cdef3627389cd6c947edb7044951830" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_sext</name></member>
-      <member refid="class_component_container_1aa38b4a6c9d9b7ced8aaf127430be44a7" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_sntr</name></member>
-      <member refid="class_component_container_1a55523a3973e56278e7b2e38c4e1f27a6" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_thr_acc</name></member>
-      <member refid="class_component_container_1a1abc30b8431ac751e54379621c1f510c" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_thr_ext</name></member>
-      <member refid="class_component_container_1aa075995173b79f92015d38ebf5e7d215" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_thr_int</name></member>
-      <member refid="class_component_container_1ad60abbbc97f1773d54c533ff59c8bda2" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_wait</name></member>
-      <member refid="class_component_container_1aa05b523e2292987e4f514ca1d765c768" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timer_zero</name></member>
-      <member refid="class_component_container_1a50be33df0b2151a5b301bfa823979dfd" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>timing</name></member>
-      <member refid="class_component_container_1a65ca2e885f2de325fe87f77db068c8ee" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>tinterval</name></member>
-      <member refid="class_component_container_1a0a1aa0bd4dc37b6b028ae90f4ce9eb65" prot="private" virt="non-virtual"><scope>ComponentContainer</scope><name>valid_keys</name></member>
-      <member refid="class_component_container_1a329537eded5d0eaaf7349508565fca1f" prot="public" virt="non-virtual"><scope>ComponentContainer</scope><name>~ComponentContainer</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_component_header.xml b/doxyxml/class_component_header.xml
deleted file mode 100644
index 0c4c7eb..0000000
--- a/doxyxml/class_component_header.xml
+++ /dev/null
@@ -1,271 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_component_header" kind="class" language="C++" prot="public">
-    <compoundname>ComponentHeader</compoundname>
-    <includes refid="header_8_h" local="no">header.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_component_header_1a51f61d57f69385929030a09a658a4ce5" prot="public" static="no" mutable="no">
-        <type>std::shared_ptr&lt; char &gt;</type>
-        <definition>std::shared_ptr&lt;char&gt; ComponentHeader::info</definition>
-        <argsstring></argsstring>
-        <name>info</name>
-        <qualifiedname>ComponentHeader::info</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_info" kindref="compound">Info</ref> string. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="55" column="19" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="55" bodyend="-1"/>
-        <referencedby refid="class_component_header_1a92e952f6c00b6d706f1b0d51017da56e" compoundref="header_8_h" startline="61" endline="71">ComponentHeader</referencedby>
-        <referencedby refid="class_component_header_1af20ccd285e7f059f5a4a9f1b01de541a" compoundref="header_8_h" startline="74" endline="84">ComponentHeader</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_header_1adbc701a318d16c3801ae8e3bbc9abc8d" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ComponentHeader::nbod</definition>
-        <argsstring></argsstring>
-        <name>nbod</name>
-        <qualifiedname>ComponentHeader::nbod</qualifiedname>
-        <briefdescription>
-<para>Number of bodies in the component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="43" column="7" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="43" bodyend="-1"/>
-        <referencedby refid="class_p_r_1_1_p_s_p_1a30508c9bcea21d4c88f3bb097935c13d" compoundref="_particle_reader_8_h" startline="407" endline="407">PR::PSP::CurrentNumber</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_header_1ac8ca5923a927b86910716613d589a6dc" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ComponentHeader::ndatr</definition>
-        <argsstring></argsstring>
-        <name>ndatr</name>
-        <qualifiedname>ComponentHeader::ndatr</qualifiedname>
-        <briefdescription>
-<para>Number of real (double) attributes per particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="49" column="7" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="49" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_header_1aba4fd93dbac413df72a87c414a0d7c54" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ComponentHeader::niatr</definition>
-        <argsstring></argsstring>
-        <name>niatr</name>
-        <qualifiedname>ComponentHeader::niatr</qualifiedname>
-        <briefdescription>
-<para>Number of integer attributes per particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="46" column="7" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ComponentHeader::ninfochar</definition>
-        <argsstring></argsstring>
-        <name>ninfochar</name>
-        <qualifiedname>ComponentHeader::ninfochar</qualifiedname>
-        <briefdescription>
-<para>Size of info string. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="52" column="7" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="52" bodyend="-1"/>
-        <referencedby refid="class_component_header_1a92e952f6c00b6d706f1b0d51017da56e" compoundref="header_8_h" startline="61" endline="71">ComponentHeader</referencedby>
-        <referencedby refid="class_component_header_1af20ccd285e7f059f5a4a9f1b01de541a" compoundref="header_8_h" startline="74" endline="84">ComponentHeader</referencedby>
-        <referencedby refid="class_component_header_1a072c894dff0c7f24f68af4f786347bc9" compoundref="header_8_h" startline="96" endline="99">getSize</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_component_header_1af62c07db9d54ed90f507d904f52fc38a" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int ComponentHeader::defaultInfoSize</definition>
-        <argsstring></argsstring>
-        <name>defaultInfoSize</name>
-        <qualifiedname>ComponentHeader::defaultInfoSize</qualifiedname>
-        <briefdescription>
-<para>Default size of info string (if not specified explicitly or read) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="58" column="14" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="58" bodyend="-1"/>
-        <referencedby refid="class_component_header_1a92e952f6c00b6d706f1b0d51017da56e" compoundref="header_8_h" startline="61" endline="71">ComponentHeader</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_component_header_1a92e952f6c00b6d706f1b0d51017da56e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>ComponentHeader::ComponentHeader</definition>
-        <argsstring>()</argsstring>
-        <name>ComponentHeader</name>
-        <qualifiedname>ComponentHeader::ComponentHeader</qualifiedname>
-        <briefdescription>
-<para>Default constructor: uses defaultInfoSize by default. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="61" column="3" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="61" bodyend="71"/>
-        <references refid="class_component_header_1af62c07db9d54ed90f507d904f52fc38a" compoundref="header_8_h" startline="58">defaultInfoSize</references>
-        <references refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" compoundref="header_8_h" startline="55">info</references>
-        <references refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" compoundref="header_8_h" startline="52">ninfochar</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_header_1af20ccd285e7f059f5a4a9f1b01de541a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>ComponentHeader::ComponentHeader</definition>
-        <argsstring>(int n)</argsstring>
-        <name>ComponentHeader</name>
-        <qualifiedname>ComponentHeader::ComponentHeader</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Construct component with info field of length n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="74" column="3" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="74" bodyend="84"/>
-        <references refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" compoundref="header_8_h" startline="55">info</references>
-        <references refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" compoundref="header_8_h" startline="52">ninfochar</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_header_1a072c894dff0c7f24f68af4f786347bc9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int ComponentHeader::getSize</definition>
-        <argsstring>()</argsstring>
-        <name>getSize</name>
-        <qualifiedname>ComponentHeader::getSize</qualifiedname>
-        <briefdescription>
-<para>Get header size. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="96" column="7" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="96" bodyend="99"/>
-        <references refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" compoundref="header_8_h" startline="52">ninfochar</references>
-      </memberdef>
-      <memberdef kind="function" id="class_component_header_1a565d1ca7343e35c48387e69ca0f924f1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool ComponentHeader::read</definition>
-        <argsstring>(istream *in)</argsstring>
-        <name>read</name>
-        <qualifiedname>ComponentHeader::read</qualifiedname>
-        <param>
-          <type>istream *</type>
-          <declname>in</declname>
-        </param>
-        <briefdescription>
-<para>Read binary header from input stream. </para>
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-        </inbodydescription>
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-        <type>bool</type>
-        <definition>bool ComponentHeader::write</definition>
-        <argsstring>(ostream *out)</argsstring>
-        <name>write</name>
-        <qualifiedname>ComponentHeader::write</qualifiedname>
-        <param>
-          <type>ostream *</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-<para>Write binary header to output stream. </para>
-        </briefdescription>
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-        <type>bool</type>
-        <definition>bool ComponentHeader::write_mpi</definition>
-        <argsstring>(MPI_File &amp;out, MPI_Offset &amp;offset)</argsstring>
-        <name>write_mpi</name>
-        <qualifiedname>ComponentHeader::write_mpi</qualifiedname>
-        <param>
-          <type>MPI_File &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>MPI_Offset &amp;</type>
-          <declname>offset</declname>
-        </param>
-        <briefdescription>
-<para>Write binary header to MPI. </para>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
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-        <type>std::ostream &amp;</type>
-        <definition>std::ostream &amp; operator&lt;&lt;</definition>
-        <argsstring>(std::ostream &amp;os, const ComponentHeader &amp;p)</argsstring>
-        <name>operator&lt;&lt;</name>
-        <qualifiedname>ComponentHeader::operator&lt;&lt;</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>os</declname>
-        </param>
-        <param>
-          <type>const <ref refid="class_component_header" kindref="compound">ComponentHeader</ref> &amp;</type>
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-        <briefdescription>
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-<para>Describe a component in a phase space dump. </para>
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diff --git a/doxyxml/class_cspline.xml b/doxyxml/class_cspline.xml
deleted file mode 100644
index 2bc5f5c..0000000
--- a/doxyxml/class_cspline.xml
+++ /dev/null
@@ -1,206 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_cspline" kind="class" language="C++" prot="public">
-    <compoundname>Cspline</compoundname>
-    <includes refid="_cspline_8_h" local="no">Cspline.H</includes>
-    <innerclass refid="class_cspline_1_1_element" prot="protected">Cspline::Element</innerclass>
-    <templateparamlist>
-      <param>
-        <type>typename X</type>
-      </param>
-      <param>
-        <type>typename Y</type>
-      </param>
-    </templateparamlist>
-    <sectiondef kind="protected-type">
-      <memberdef kind="typedef" id="class_cspline_1a3c46eab83a7860156a3c88e9a6066203" prot="protected" static="no">
-        <type><ref refid="class_cspline_1_1_element" kindref="compound">Element</ref></type>
-        <definition>typedef Element Cspline&lt; X, Y &gt;::element_type</definition>
-        <argsstring></argsstring>
-        <name>element_type</name>
-        <qualifiedname>Cspline::element_type</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="158" column="19" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="158" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_cspline_1ae15b871aeb0f0e4485237f5946a80f78" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_cspline_1a3c46eab83a7860156a3c88e9a6066203" kindref="member">element_type</ref> &gt;</type>
-        <definition>std::vector&lt;element_type&gt; Cspline&lt; X, Y &gt;::elems</definition>
-        <argsstring></argsstring>
-        <name>elems</name>
-        <qualifiedname>Cspline::elems</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="159" column="15" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="159" bodyend="-1"/>
-        <referencedby refid="class_cspline_1ad6fa4d810f545fe1967399d20eceb378" compoundref="_cspline_8_h" startline="22" endline="68">Cspline&lt; X, Y &gt;::Cspline</referencedby>
-        <referencedby refid="class_cspline_1ae38e1c7b2692662c18b26164b17fa475" compoundref="_cspline_8_h" startline="100" endline="118">Cspline&lt; X, Y &gt;::interpolate</referencedby>
-        <referencedby refid="class_cspline_1ad8a518270aa62168c4951fd25db97459" compoundref="_cspline_8_h" startline="80" endline="91">Cspline&lt; X, Y &gt;::interpolate</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_cspline_1ac98f7297092af1eb9d4909c171bdcec2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>Cspline&lt; X, Y &gt;::Cspline</definition>
-        <argsstring>()</argsstring>
-        <name>Cspline</name>
-        <qualifiedname>Cspline::Cspline</qualifiedname>
-        <briefdescription>
-<para>Null constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="19" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="19" bodyend="19"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1ad6fa4d810f545fe1967399d20eceb378" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>Cspline&lt; X, Y &gt;::Cspline</definition>
-        <argsstring>(const std::vector&lt; X &gt; &amp;x, const std::vector&lt; Y &gt; &amp;y)</argsstring>
-        <name>Cspline</name>
-        <qualifiedname>Cspline::Cspline</qualifiedname>
-        <param>
-          <type>const std::vector&lt; X &gt; &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; Y &gt; &amp;</type>
-          <declname>y</declname>
-        </param>
-        <briefdescription>
-<para>Constructor for spline with x and y vectors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="22" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="22" bodyend="68"/>
-        <references refid="class_cspline_1ae15b871aeb0f0e4485237f5946a80f78" compoundref="_cspline_8_h" startline="159">Cspline&lt; X, Y &gt;::elems</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1ae38e1c7b2692662c18b26164b17fa475" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::vector&lt; Y &gt;</type>
-        <definition>std::vector&lt; Y &gt; Cspline&lt; X, Y &gt;::interpolate</definition>
-        <argsstring>(const std::vector&lt; X &gt; &amp;xx) const</argsstring>
-        <name>interpolate</name>
-        <qualifiedname>Cspline::interpolate</qualifiedname>
-        <param>
-          <type>const std::vector&lt; X &gt; &amp;</type>
-          <declname>xx</declname>
-        </param>
-        <briefdescription>
-<para>Evaluation function for vector input, assuming xx is sorted ascending. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="100" column="15" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="100" bodyend="118"/>
-        <references refid="class_cspline_1ae15b871aeb0f0e4485237f5946a80f78" compoundref="_cspline_8_h" startline="159">Cspline&lt; X, Y &gt;::elems</references>
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-        <type>Y</type>
-        <definition>Y Cspline&lt; X, Y &gt;::interpolate</definition>
-        <argsstring>(const X &amp;x) const</argsstring>
-        <name>interpolate</name>
-        <qualifiedname>Cspline::interpolate</qualifiedname>
-        <param>
-          <type>const X &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Evaluation function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="80" column="5" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="80" bodyend="91"/>
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-        <referencedby refid="class_cspline_1a4e88fff38b950858c598092fa7785866" compoundref="_cspline_8_h" startline="94" endline="97">Cspline&lt; X, Y &gt;::operator()</referencedby>
-        <referencedby refid="class_cspline_1a448c189bb54e7a1eaf56d3947456776e" compoundref="_cspline_8_h" startline="74" endline="77">Cspline&lt; X, Y &gt;::operator()</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1a4e88fff38b950858c598092fa7785866" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::vector&lt; Y &gt;</type>
-        <definition>std::vector&lt; Y &gt; Cspline&lt; X, Y &gt;::operator()</definition>
-        <argsstring>(const std::vector&lt; X &gt; &amp;xx) const</argsstring>
-        <name>operator()</name>
-        <qualifiedname>Cspline::operator()</qualifiedname>
-        <param>
-          <type>const std::vector&lt; X &gt; &amp;</type>
-          <declname>xx</declname>
-        </param>
-        <briefdescription>
-<para>Evaluation operator for vector input, assuming xx is sorted ascending. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="94" column="15" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="94" bodyend="97"/>
-        <references refid="class_cspline_1ad8a518270aa62168c4951fd25db97459" compoundref="_cspline_8_h" startline="80" endline="91">Cspline&lt; X, Y &gt;::interpolate</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1a448c189bb54e7a1eaf56d3947456776e" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>Y</type>
-        <definition>Y Cspline&lt; X, Y &gt;::operator()</definition>
-        <argsstring>(const X &amp;x) const</argsstring>
-        <name>operator()</name>
-        <qualifiedname>Cspline::operator()</qualifiedname>
-        <param>
-          <type>const X &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Evaluation opterator. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="74" column="5" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="74" bodyend="77"/>
-        <references refid="class_cspline_1ad8a518270aa62168c4951fd25db97459" compoundref="_cspline_8_h" startline="80" endline="91">Cspline&lt; X, Y &gt;::interpolate</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1a4b826231286c043394b9977affcf8fbf" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual Cspline&lt; X, Y &gt;::~Cspline</definition>
-        <argsstring>()</argsstring>
-        <name>~Cspline</name>
-        <qualifiedname>Cspline::~Cspline</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="71" column="11" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="71" bodyend="71"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>A cubic spline evaluator templated on data types X, Y. Types X and Y must have operator +, -, *, Y must have defined a constructor that takes a scalar. </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="14" column="1" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="15" bodyend="160"/>
-    <listofallmembers>
-      <member refid="class_cspline_1ac98f7297092af1eb9d4909c171bdcec2" prot="public" virt="non-virtual"><scope>Cspline</scope><name>Cspline</name></member>
-      <member refid="class_cspline_1ad6fa4d810f545fe1967399d20eceb378" prot="public" virt="non-virtual"><scope>Cspline</scope><name>Cspline</name></member>
-      <member refid="class_cspline_1a3c46eab83a7860156a3c88e9a6066203" prot="protected" virt="non-virtual"><scope>Cspline</scope><name>element_type</name></member>
-      <member refid="class_cspline_1ae15b871aeb0f0e4485237f5946a80f78" prot="protected" virt="non-virtual"><scope>Cspline</scope><name>elems</name></member>
-      <member refid="class_cspline_1ad8a518270aa62168c4951fd25db97459" prot="public" virt="non-virtual"><scope>Cspline</scope><name>interpolate</name></member>
-      <member refid="class_cspline_1ae38e1c7b2692662c18b26164b17fa475" prot="public" virt="non-virtual"><scope>Cspline</scope><name>interpolate</name></member>
-      <member refid="class_cspline_1a448c189bb54e7a1eaf56d3947456776e" prot="public" virt="non-virtual"><scope>Cspline</scope><name>operator()</name></member>
-      <member refid="class_cspline_1a4e88fff38b950858c598092fa7785866" prot="public" virt="non-virtual"><scope>Cspline</scope><name>operator()</name></member>
-      <member refid="class_cspline_1a4b826231286c043394b9977affcf8fbf" prot="public" virt="virtual"><scope>Cspline</scope><name>~Cspline</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_cspline_1_1_element.xml b/doxyxml/class_cspline_1_1_element.xml
deleted file mode 100644
index 19fb362..0000000
--- a/doxyxml/class_cspline_1_1_element.xml
+++ /dev/null
@@ -1,225 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_cspline_1_1_element" kind="class" language="C++" prot="protected">
-    <compoundname>Cspline::Element</compoundname>
-    <includes refid="_cspline_8_h" local="no">Cspline.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_cspline_1_1_element_1ab8eee4f586ed59e3ec087886a51c3962" prot="public" static="no" mutable="no">
-        <type>Y</type>
-        <definition>Y Cspline&lt; X, Y &gt;::Element::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>Cspline::Element::a</qualifiedname>
-        <briefdescription>
-<para>Cubic coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="130" column="7" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="130" bodyend="-1"/>
-        <referencedby refid="class_cspline_1_1_element_1aa4d538b676dd7cea1822f8c2ff988b46" compoundref="_cspline_8_h" startline="141" endline="144">Cspline&lt; X, Y &gt;::Element::eval</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_cspline_1_1_element_1ae271037d9bb62ce91a78940c36300209" prot="public" static="no" mutable="no">
-        <type>Y</type>
-        <definition>Y Cspline&lt; X, Y &gt;::Element::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>Cspline::Element::b</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="130" column="9" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="130" bodyend="-1"/>
-        <referencedby refid="class_cspline_1_1_element_1aa4d538b676dd7cea1822f8c2ff988b46" compoundref="_cspline_8_h" startline="141" endline="144">Cspline&lt; X, Y &gt;::Element::eval</referencedby>
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-      <memberdef kind="variable" id="class_cspline_1_1_element_1a56d0aaef4e3e6f669bf3d564fe1f5ef3" prot="public" static="no" mutable="no">
-        <type>Y</type>
-        <definition>Y Cspline&lt; X, Y &gt;::Element::c</definition>
-        <argsstring></argsstring>
-        <name>c</name>
-        <qualifiedname>Cspline::Element::c</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="130" column="11" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="130" bodyend="-1"/>
-        <referencedby refid="class_cspline_1_1_element_1aa4d538b676dd7cea1822f8c2ff988b46" compoundref="_cspline_8_h" startline="141" endline="144">Cspline&lt; X, Y &gt;::Element::eval</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_cspline_1_1_element_1a94f1f08e4f9def88aac03c33566d14a7" prot="public" static="no" mutable="no">
-        <type>Y</type>
-        <definition>Y Cspline&lt; X, Y &gt;::Element::d</definition>
-        <argsstring></argsstring>
-        <name>d</name>
-        <qualifiedname>Cspline::Element::d</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="130" column="13" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="130" bodyend="-1"/>
-        <referencedby refid="class_cspline_1_1_element_1aa4d538b676dd7cea1822f8c2ff988b46" compoundref="_cspline_8_h" startline="141" endline="144">Cspline&lt; X, Y &gt;::Element::eval</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" prot="public" static="no" mutable="no">
-        <type>X</type>
-        <definition>X Cspline&lt; X, Y &gt;::Element::x</definition>
-        <argsstring></argsstring>
-        <name>x</name>
-        <qualifiedname>Cspline::Element::x</qualifiedname>
-        <briefdescription>
-<para>The ordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="127" column="7" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="127" bodyend="-1"/>
-        <referencedby refid="class_cspline_1_1_element_1aa4d538b676dd7cea1822f8c2ff988b46" compoundref="_cspline_8_h" startline="141" endline="144">Cspline&lt; X, Y &gt;::Element::eval</referencedby>
-        <referencedby refid="class_cspline_1_1_element_1ad543a799407dc088f23fc39d0dd50cc8" compoundref="_cspline_8_h" startline="148" endline="150">Cspline&lt; X, Y &gt;::Element::operator&lt;</referencedby>
-        <referencedby refid="class_cspline_1_1_element_1a163309bdd9e64c3eab1805a454691fd2" compoundref="_cspline_8_h" startline="151" endline="153">Cspline&lt; X, Y &gt;::Element::operator&lt;</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_cspline_1_1_element_1a1a0231e6a7d5d8ead2f6c79a866137f1" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>Cspline&lt; X, Y &gt;::Element::Element</definition>
-        <argsstring>(X _x)</argsstring>
-        <name>Element</name>
-        <qualifiedname>Cspline::Element::Element</qualifiedname>
-        <param>
-          <type>X</type>
-          <declname>_x</declname>
-        </param>
-        <briefdescription>
-<para>Define the ordinate only. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="133" column="5" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="133" bodyend="134"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1_1_element_1a08e8e2037fcca100f743c4f1f82ad6d9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>Cspline&lt; X, Y &gt;::Element::Element</definition>
-        <argsstring>(X _x, Y _a, Y _b, Y _c, Y _d)</argsstring>
-        <name>Element</name>
-        <qualifiedname>Cspline::Element::Element</qualifiedname>
-        <param>
-          <type>X</type>
-          <declname>_x</declname>
-        </param>
-        <param>
-          <type>Y</type>
-          <declname>_a</declname>
-        </param>
-        <param>
-          <type>Y</type>
-          <declname>_b</declname>
-        </param>
-        <param>
-          <type>Y</type>
-          <declname>_c</declname>
-        </param>
-        <param>
-          <type>Y</type>
-          <declname>_d</declname>
-        </param>
-        <briefdescription>
-<para>The ordinate and the cubic coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="137" column="5" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="137" bodyend="138"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1_1_element_1aa4d538b676dd7cea1822f8c2ff988b46" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>Y</type>
-        <definition>Y Cspline&lt; X, Y &gt;::Element::eval</definition>
-        <argsstring>(const X &amp;xx) const</argsstring>
-        <name>eval</name>
-        <qualifiedname>Cspline::Element::eval</qualifiedname>
-        <param>
-          <type>const X &amp;</type>
-          <declname>xx</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the fit. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="141" column="7" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="141" bodyend="144"/>
-        <references refid="class_cspline_1_1_element_1ab8eee4f586ed59e3ec087886a51c3962" compoundref="_cspline_8_h" startline="130">Cspline&lt; X, Y &gt;::Element::a</references>
-        <references refid="class_cspline_1_1_element_1ae271037d9bb62ce91a78940c36300209" compoundref="_cspline_8_h" startline="130">Cspline&lt; X, Y &gt;::Element::b</references>
-        <references refid="class_cspline_1_1_element_1a56d0aaef4e3e6f669bf3d564fe1f5ef3" compoundref="_cspline_8_h" startline="130">Cspline&lt; X, Y &gt;::Element::c</references>
-        <references refid="class_cspline_1_1_element_1a94f1f08e4f9def88aac03c33566d14a7" compoundref="_cspline_8_h" startline="130">Cspline&lt; X, Y &gt;::Element::d</references>
-        <references refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" compoundref="_cspline_8_h" startline="127">Cspline&lt; X, Y &gt;::Element::x</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1_1_element_1ad543a799407dc088f23fc39d0dd50cc8" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool Cspline&lt; X, Y &gt;::Element::operator&lt;</definition>
-        <argsstring>(const Element &amp;e) const</argsstring>
-        <name>operator&lt;</name>
-        <qualifiedname>Cspline::Element::operator&lt;</qualifiedname>
-        <param>
-          <type>const <ref refid="class_cspline_1_1_element" kindref="compound">Element</ref> &amp;</type>
-          <declname>e</declname>
-        </param>
-        <briefdescription>
-<para>Sorting operators. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="148" column="5" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="148" bodyend="150"/>
-        <references refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" compoundref="_cspline_8_h" startline="127">Cspline&lt; X, Y &gt;::Element::x</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cspline_1_1_element_1a163309bdd9e64c3eab1805a454691fd2" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool Cspline&lt; X, Y &gt;::Element::operator&lt;</definition>
-        <argsstring>(const X &amp;xx) const</argsstring>
-        <name>operator&lt;</name>
-        <qualifiedname>Cspline::Element::operator&lt;</qualifiedname>
-        <param>
-          <type>const X &amp;</type>
-          <declname>xx</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="151" column="5" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="151" bodyend="153"/>
-        <references refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" compoundref="_cspline_8_h" startline="127">Cspline&lt; X, Y &gt;::Element::x</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>A cubic spline fit for an interval. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/Cspline.H" line="123" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Cspline.H" bodystart="124" bodyend="156"/>
-    <listofallmembers>
-      <member refid="class_cspline_1_1_element_1ab8eee4f586ed59e3ec087886a51c3962" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>a</name></member>
-      <member refid="class_cspline_1_1_element_1ae271037d9bb62ce91a78940c36300209" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>b</name></member>
-      <member refid="class_cspline_1_1_element_1a56d0aaef4e3e6f669bf3d564fe1f5ef3" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>c</name></member>
-      <member refid="class_cspline_1_1_element_1a94f1f08e4f9def88aac03c33566d14a7" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>d</name></member>
-      <member refid="class_cspline_1_1_element_1a1a0231e6a7d5d8ead2f6c79a866137f1" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>Element</name></member>
-      <member refid="class_cspline_1_1_element_1a08e8e2037fcca100f743c4f1f82ad6d9" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>Element</name></member>
-      <member refid="class_cspline_1_1_element_1aa4d538b676dd7cea1822f8c2ff988b46" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>eval</name></member>
-      <member refid="class_cspline_1_1_element_1ad543a799407dc088f23fc39d0dd50cc8" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>operator&lt;</name></member>
-      <member refid="class_cspline_1_1_element_1a163309bdd9e64c3eab1805a454691fd2" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>operator&lt;</name></member>
-      <member refid="class_cspline_1_1_element_1a619eec3164dd8e6790a6b9cf3de94ced" prot="public" virt="non-virtual"><scope>Cspline::Element</scope><name>x</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_cube.xml b/doxyxml/class_cube.xml
deleted file mode 100644
index fa82457..0000000
--- a/doxyxml/class_cube.xml
+++ /dev/null
@@ -1,875 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_cube" kind="class" language="C++" prot="public">
-    <compoundname>Cube</compoundname>
-    <basecompoundref refid="class_pot_accel" prot="public" virt="non-virtual">PotAccel</basecompoundref>
-    <includes refid="_cube_8_h" local="no">Cube.H</includes>
-    <innerclass refid="class_cube_1_1exe_timer" prot="private">Cube::exeTimer</innerclass>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" prot="private" static="no">
-        <type>Eigen::Tensor&lt; std::complex&lt; double &gt;, 3 &gt;</type>
-        <definition>using Cube::coefType =  Eigen::Tensor&lt;std::complex&lt;double&gt;, 3&gt;</definition>
-        <argsstring></argsstring>
-        <name>coefType</name>
-        <qualifiedname>Cube::coefType</qualifiedname>
-        <briefdescription>
-<para>Coefficients are a 3-tensor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="28" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_cube_1ab742d871c9099dec61532a45fca95c76" prot="private" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" kindref="member">coefType</ref> &gt;</type>
-        <definition>using Cube::coefTypePtr =  std::shared_ptr&lt;coefType&gt;</definition>
-        <argsstring></argsstring>
-        <name>coefTypePtr</name>
-        <qualifiedname>Cube::coefTypePtr</qualifiedname>
-        <briefdescription>
-<para>Interpolation arrays. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="162" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="162" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_cube_1a4cecb0c2cf57731c90a85233bcc55501" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Cube::byPlanes</definition>
-        <argsstring></argsstring>
-        <name>byPlanes</name>
-        <qualifiedname>Cube::byPlanes</qualifiedname>
-        <briefdescription>
-<para>Plane method (default: true) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="93" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="93" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1aa8c977869ddc1963a8256a08e7969541" prot="private" static="no" mutable="no">
-        <type>CoefClasses::CubeCoefs</type>
-        <definition>CoefClasses::CubeCoefs Cube::cubeCoefs</definition>
-        <argsstring></argsstring>
-        <name>cubeCoefs</name>
-        <qualifiedname>Cube::cubeCoefs</qualifiedname>
-        <briefdescription>
-<para>Coefficient container instance for writing HDF5. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="202" column="26" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="202" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a1952c8a09a2ce4e3c0a576705e52330c" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string Cube::cuMethod</definition>
-        <argsstring></argsstring>
-        <name>cuMethod</name>
-        <qualifiedname>Cube::cuMethod</qualifiedname>
-        <briefdescription>
-<para>Cuda batch method (string, default: planes. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="96" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="96" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1ac6bf2eb17382cbb151e7e4ffa7bcccd2" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Cube::dfac</definition>
-        <argsstring></argsstring>
-        <name>dfac</name>
-        <qualifiedname>Cube::dfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="38" column="11" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1aa78d482c8b6a1fe126851f734541d977" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; <ref refid="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" kindref="member">coefType</ref> &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;coefType&gt; &gt; Cube::differ1</definition>
-        <argsstring></argsstring>
-        <name>differ1</name>
-        <qualifiedname>Cube::differ1</qualifiedname>
-        <briefdescription>
-<para>For updating levels. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="156" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="156" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1adb1e1b037b2b5209bfef71b5949aba98" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" kindref="member">coefType</ref> &gt;</type>
-        <definition>std::vector&lt;coefType&gt; Cube::expcoef</definition>
-        <argsstring></argsstring>
-        <name>expcoef</name>
-        <qualifiedname>Cube::expcoef</qualifiedname>
-        <briefdescription>
-<para>Current coefficient tensor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="31" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a998df89b8e78ad060a8d8db6ca14436a" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_cube_1ab742d871c9099dec61532a45fca95c76" kindref="member">coefTypePtr</ref> &gt;</type>
-        <definition>std::vector&lt;coefTypePtr&gt; Cube::expcoefL</definition>
-        <argsstring></argsstring>
-        <name>expcoefL</name>
-        <qualifiedname>Cube::expcoefL</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="164" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="164" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a400e9540de9a77489f86adf61089a726" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_cube_1ab742d871c9099dec61532a45fca95c76" kindref="member">coefTypePtr</ref> &gt;</type>
-        <definition>std::vector&lt;coefTypePtr&gt; Cube::expcoefN</definition>
-        <argsstring></argsstring>
-        <name>expcoefN</name>
-        <qualifiedname>Cube::expcoefN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="163" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="163" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a170ce6cbd756a9102cb759cb50b30024" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" kindref="member">coefType</ref> &gt;</type>
-        <definition>std::vector&lt;coefType&gt; Cube::expcoefP</definition>
-        <argsstring></argsstring>
-        <name>expcoefP</name>
-        <qualifiedname>Cube::expcoefP</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="31" column="23" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a2cd78e3d60cfc5cedd8586dacd8a1705" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::imx</definition>
-        <argsstring></argsstring>
-        <name>imx</name>
-        <qualifiedname>Cube::imx</qualifiedname>
-        <briefdescription>
-<para>Variables. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="35" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a436392598e00a0ebadfc47c7b5db0af2" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::imy</definition>
-        <argsstring></argsstring>
-        <name>imy</name>
-        <qualifiedname>Cube::imy</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="35" column="11" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a3c009587307aec93ec80154f80c115db" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::imz</definition>
-        <argsstring></argsstring>
-        <name>imz</name>
-        <qualifiedname>Cube::imz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="35" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a1c8a7a7aeb99d41dc2e5142534ba5196" prot="private" static="no" mutable="no">
-        <type>std::complex&lt; double &gt;</type>
-        <definition>std::complex&lt;double&gt; Cube::kfac</definition>
-        <argsstring></argsstring>
-        <name>kfac</name>
-        <qualifiedname>Cube::kfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="37" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a8bb5e673c54cdd4e06f03e5ade58834b" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::nmaxx</definition>
-        <argsstring></argsstring>
-        <name>nmaxx</name>
-        <qualifiedname>Cube::nmaxx</qualifiedname>
-        <briefdescription>
-<para>Minimum wave numbers in each dimesion. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="184" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="184" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1aa0e2b466612e4eb7cc4ee1d7d13f03cf" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::nmaxy</definition>
-        <argsstring></argsstring>
-        <name>nmaxy</name>
-        <qualifiedname>Cube::nmaxy</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="184" column="13" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="184" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a093c4f102752c66a4d6324e7174ddfa7" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::nmaxz</definition>
-        <argsstring></argsstring>
-        <name>nmaxz</name>
-        <qualifiedname>Cube::nmaxz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="184" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="184" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1aba2bbc797f9ff22d84b717020d2d453e" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::nminx</definition>
-        <argsstring></argsstring>
-        <name>nminx</name>
-        <qualifiedname>Cube::nminx</qualifiedname>
-        <briefdescription>
-<para>Maximum wave numbers in each dimesion. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="189" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="189" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1ae65b9fa67c184819f59b2cbfd573d6da" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::nminy</definition>
-        <argsstring></argsstring>
-        <name>nminy</name>
-        <qualifiedname>Cube::nminy</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="189" column="13" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="189" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1afaac06a8562dc7ebca3cf369ec78aa29" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::nminz</definition>
-        <argsstring></argsstring>
-        <name>nminz</name>
-        <qualifiedname>Cube::nminz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="189" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="189" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a068cd3dac6557341ed528b0c7420b314" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::osize</definition>
-        <argsstring></argsstring>
-        <name>osize</name>
-        <qualifiedname>Cube::osize</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="35" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a18041085eb33036c41e1fe0e11bd940a" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::complex&lt; double &gt; &gt;</type>
-        <definition>std::vector&lt; std::complex&lt;double&gt; &gt; Cube::pack</definition>
-        <argsstring></argsstring>
-        <name>pack</name>
-        <qualifiedname>Cube::pack</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="157" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="157" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a26c844f3663104af25a4489fc85da63d" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::complex&lt; double &gt; &gt;</type>
-        <definition>std::vector&lt; std::complex&lt;double&gt; &gt; Cube::unpack</definition>
-        <argsstring></argsstring>
-        <name>unpack</name>
-        <qualifiedname>Cube::unpack</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="157" column="20" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="157" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a0fa11ac46e1eb6cdb946d26dd8617cca" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::use0</definition>
-        <argsstring></argsstring>
-        <name>use0</name>
-        <qualifiedname>Cube::use0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="36" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cube_1a81c93879fae311863874fc1cb419d43f" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cube::use1</definition>
-        <argsstring></argsstring>
-        <name>use1</name>
-        <qualifiedname>Cube::use1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="36" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_cube_1ad8775386b95dbf5ea4cb6995d69df1aa" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; Cube::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>Cube::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="42" column="25" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="42" bodyend="-1"/>
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-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_cube_1a2b54b44a2c8891108ccaf1cf456e1a1f" prot="public" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string Cube::id</definition>
-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>Cube::id</qualifiedname>
-        <briefdescription>
-<para>Id string. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="223" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="223" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void Cube::compute_multistep_coefficients</definition>
-        <argsstring>()</argsstring>
-        <name>compute_multistep_coefficients</name>
-        <qualifiedname>Cube::compute_multistep_coefficients</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Extrapolate and sum coefficents per multistep level to get a complete set of coefficients for force evaluation at an intermediate time step </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="152" column="8"/>
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-      <memberdef kind="function" id="class_cube_1ae2f7fd3450813c7533430a43a016cdf5" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cube::determine_acceleration_and_potential</definition>
-        <argsstring>()</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>Cube::determine_acceleration_and_potential</qualifiedname>
-        <briefdescription>
-<para>Do the work. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="199" column="8"/>
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-      <memberdef kind="function" id="class_cube_1aa2a95971c28f6143b7521bd0d2087662" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * Cube::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>Cube::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the force computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="195" column="9"/>
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-      <memberdef kind="function" id="class_cube_1a3defa1a8f6b8fe67fa353632c0c9635a" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * Cube::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
-        <qualifiedname>Cube::determine_coefficients_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49">determine_coefficients_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Threading. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="194" column="9"/>
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-      <memberdef kind="function" id="class_cube_1a4889dfcc0b07a325577d3a632ab167d3" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cube::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>Cube::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Parameter and storage initialization. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="179" column="8"/>
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-      <memberdef kind="function" id="class_cube_1a03b09ee07d08268915b8b451b92da758" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cube::multistep_update</definition>
-        <argsstring>(int cur, int next, Component *c, int i, int id)</argsstring>
-        <name>multistep_update</name>
-        <qualifiedname>Cube::multistep_update</qualifiedname>
-        <reimplements refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a">multistep_update</reimplements>
-        <param>
-          <type>int</type>
-          <declname>cur</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>next</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
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-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-<para>Implementation of level shifts. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="173" column="16"/>
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-      <memberdef kind="function" id="class_cube_1a53955c4fa1ad731cc63b614db11b51ec" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cube::multistep_update_begin</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_begin</name>
-        <qualifiedname>Cube::multistep_update_begin</qualifiedname>
-        <reimplements refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381">multistep_update_begin</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step coefficient table when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="172" column="16"/>
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-      <memberdef kind="function" id="class_cube_1ae914dcb2011835bb35b556b614c1aa8c" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cube::multistep_update_finish</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_finish</name>
-        <qualifiedname>Cube::multistep_update_finish</qualifiedname>
-        <reimplements refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e">multistep_update_finish</reimplements>
-        <briefdescription>
-<para>Execute to finish level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="174" column="16"/>
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-      <memberdef kind="function" id="class_cube_1a0006a93a3ebb09ca12697b2ad22342df" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cube::swap_coefs</definition>
-        <argsstring>(std::vector&lt; coefType &gt; &amp;from, std::vector&lt; coefType &gt; &amp;to)</argsstring>
-        <name>swap_coefs</name>
-        <qualifiedname>Cube::swap_coefs</qualifiedname>
-        <param>
-          <type>std::vector&lt; <ref refid="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" kindref="member">coefType</ref> &gt; &amp;</type>
-          <declname>from</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; <ref refid="class_cube_1ad68c65cb1f4f5e3abcfa61e5b320ebae" kindref="member">coefType</ref> &gt; &amp;</type>
-          <declname>to</declname>
-        </param>
-        <briefdescription>
-<para><ref refid="class_swap" kindref="compound">Swap</ref> coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="205" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="205" bodyend="217"/>
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-    </sectiondef>
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-        <type></type>
-        <definition>Cube::Cube</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf)</argsstring>
-        <name>Cube</name>
-        <qualifiedname>Cube::Cube</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="226" column="3"/>
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-      <memberdef kind="function" id="class_cube_1a6da6df3f255795b3e3765bc72af8ea76" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cube::determine_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>Cube::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Compute the coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="232" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cube_1ad41166930efa0c9005e1190ea95c98e0" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cube::dump_coefs_h5</definition>
-        <argsstring>(const std::string &amp;file)</argsstring>
-        <name>dump_coefs_h5</name>
-        <qualifiedname>Cube::dump_coefs_h5</qualifiedname>
-        <reimplements refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c">dump_coefs_h5</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-<para>Coefficient output. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="238" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cube_1a8477225cbb41bff514d27192542d7155" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cube::get_acceleration_and_potential</definition>
-        <argsstring>(Component *)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>Cube::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        </param>
-        <briefdescription>
-<para>Compute the force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="235" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cube_1a600d629a60344171d18ae77b3fb43912" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual Cube::~Cube</definition>
-        <argsstring>()</argsstring>
-        <name>~Cube</name>
-        <qualifiedname>Cube::~Cube</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="229" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Periodic cube basis. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>Cube</label>
-        <link refid="class_cube"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="4">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="2" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Cube</label>
-        <link refid="class_cube"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="5">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="3">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/Cube.H" line="22" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Cube.H" bodystart="23" bodyend="239"/>
-    <listofallmembers>
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-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>Cube</scope><name>cC</name></member>
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-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>Cube</scope><name>ClearExternal</name></member>
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-      <member refid="class_cube_1a0a8bd4c474818c42bb797035d86ac553" prot="private" virt="non-virtual"><scope>Cube</scope><name>compute_multistep_coefficients</name></member>
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-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>Cube</scope><name>cudaAware</name></member>
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-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>Cube</scope><name>cylinder</name></member>
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-      <member refid="class_cube_1a3defa1a8f6b8fe67fa353632c0c9635a" prot="private" virt="virtual"><scope>Cube</scope><name>determine_coefficients_thread</name></member>
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-      <member refid="class_cube_1ad41166930efa0c9005e1190ea95c98e0" prot="public" virt="virtual"><scope>Cube</scope><name>dump_coefs_h5</name></member>
-      <member refid="class_pot_accel_1abee9651463af53460b622250d311329e" prot="public" virt="non-virtual"><scope>Cube</scope><name>exp_thread_fork</name></member>
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-      <member refid="class_pot_accel_1adb6ef0bdae7d3520ca1f9fd8a6d648ea" prot="public" virt="non-virtual"><scope>Cube</scope><name>geometry</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fd" prot="public" virt="non-virtual"><scope>Cube</scope><name>Geometry</name></member>
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-      <member refid="class_cube_1a8477225cbb41bff514d27192542d7155" prot="public" virt="virtual"><scope>Cube</scope><name>get_acceleration_and_potential</name></member>
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-      <member refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121" prot="public" virt="virtual"><scope>Cube</scope><name>multistep_debug</name></member>
-      <member refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f" prot="public" virt="virtual"><scope>Cube</scope><name>multistep_reset</name></member>
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-      <member refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" prot="protected" virt="non-virtual"><scope>Cube</scope><name>play_back</name></member>
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-      <member refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" prot="public" virt="non-virtual"><scope>Cube</scope><name>PotAccel</name></member>
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-      <member refid="class_pot_accel_1a37a3c348c0febbf70ff94949071c3beb" prot="public" virt="non-virtual"><scope>Cube</scope><name>print_timings</name></member>
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-      <member refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" prot="public" virt="virtual"><scope>Cube</scope><name>set_multistep_level</name></member>
-      <member refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" prot="public" virt="non-virtual"><scope>Cube</scope><name>SetExternal</name></member>
-      <member refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" prot="public" virt="virtual"><scope>Cube</scope><name>setScale</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda0a1acd8c0d6e745fb0ae3e33e458a9b8" prot="public" virt="non-virtual"><scope>Cube</scope><name>slab</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda996ce4577548b6da6b1330a78b1c6f6a" prot="public" virt="non-virtual"><scope>Cube</scope><name>sphere</name></member>
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-      <member refid="class_pot_accel_1aff158a74d7328a080ed619c1456836f5" prot="private" virt="non-virtual"><scope>Cube</scope><name>t</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda1792d3c00a41ee78957c83611fd368a2" prot="public" virt="non-virtual"><scope>Cube</scope><name>table</name></member>
-      <member refid="class_pot_accel_1a125d7343a34d292a3e4a48a5d984cac4" prot="private" virt="non-virtual"><scope>Cube</scope><name>td</name></member>
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-      <member refid="class_pot_accel_1a76c805cd8d0d134d37929eeb48115b33" prot="public" virt="non-virtual"><scope>Cube</scope><name>thread_timing_end</name></member>
-      <member refid="class_pot_accel_1a4315e73a641c54eefc548b7d14cb06b6" prot="protected" virt="non-virtual"><scope>Cube</scope><name>timer_list</name></member>
-      <member refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" prot="public" virt="non-virtual"><scope>Cube</scope><name>TList</name></member>
-      <member refid="class_pot_accel_1a0355cfe43cdde5237f7be234e94de64b" prot="public" virt="non-virtual"><scope>Cube</scope><name>unmatched</name></member>
-      <member refid="class_cube_1a26c844f3663104af25a4489fc85da63d" prot="private" virt="non-virtual"><scope>Cube</scope><name>unpack</name></member>
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-      <member refid="class_cube_1a81c93879fae311863874fc1cb419d43f" prot="private" virt="non-virtual"><scope>Cube</scope><name>use1</name></member>
-      <member refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" prot="protected" virt="non-virtual"><scope>Cube</scope><name>use_external</name></member>
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diff --git a/doxyxml/class_cube_1_1exe_timer.xml b/doxyxml/class_cube_1_1exe_timer.xml
deleted file mode 100644
index f6d1be8..0000000
--- a/doxyxml/class_cube_1_1exe_timer.xml
+++ /dev/null
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diff --git a/doxyxml/class_cubic___table.xml b/doxyxml/class_cubic___table.xml
deleted file mode 100644
index 59880c0..0000000
--- a/doxyxml/class_cubic___table.xml
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diff --git a/doxyxml/class_cyclic_iterator.xml b/doxyxml/class_cyclic_iterator.xml
deleted file mode 100644
index dd0ddc4..0000000
--- a/doxyxml/class_cyclic_iterator.xml
+++ /dev/null
@@ -1,348 +0,0 @@
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diff --git a/doxyxml/class_cyl_disk.xml b/doxyxml/class_cyl_disk.xml
deleted file mode 100644
index 0e3692c..0000000
--- a/doxyxml/class_cyl_disk.xml
+++ /dev/null
@@ -1,763 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; CylDisk::dd</definition>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="22" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1ae1834978ae1f35cccf035bde739a0100" compoundref="_cyl_disk_8_h" startline="53" endline="58">get_density</referencedby>
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-        <type>double</type>
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-        <name>dr</name>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="23" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="23" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" compoundref="_cyl_disk_8_h" startline="75" endline="85">get_dpot2</referencedby>
-        <referencedby refid="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" compoundref="_cyl_disk_8_h" startline="87" endline="99">get_pot_dpot</referencedby>
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; CylDisk::mm</definition>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="22" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1aea08fe9de8e203398ef0ac6e583b09cf" compoundref="_cyl_disk_8_h" startline="46" endline="51">get_mass</referencedby>
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; CylDisk::pp</definition>
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-        <name>pp</name>
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-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="22" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1ad4ff5ae0adcc35a7e9326e87e48c43c2" compoundref="_cyl_disk_8_h" startline="68" endline="73">get_dpot</referencedby>
-        <referencedby refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" compoundref="_cyl_disk_8_h" startline="75" endline="85">get_dpot2</referencedby>
-        <referencedby refid="class_cyl_disk_1a69c0c5c4932ea5a27a4035693f77e7c0" compoundref="_cyl_disk_8_h" startline="60" endline="65">get_pot</referencedby>
-        <referencedby refid="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" compoundref="_cyl_disk_8_h" startline="87" endline="99">get_pot_dpot</referencedby>
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-        <type>bool</type>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="21" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="21" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1ae1834978ae1f35cccf035bde739a0100" compoundref="_cyl_disk_8_h" startline="53" endline="58">get_density</referencedby>
-        <referencedby refid="class_cyl_disk_1ad4ff5ae0adcc35a7e9326e87e48c43c2" compoundref="_cyl_disk_8_h" startline="68" endline="73">get_dpot</referencedby>
-        <referencedby refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" compoundref="_cyl_disk_8_h" startline="75" endline="85">get_dpot2</referencedby>
-        <referencedby refid="class_cyl_disk_1aea08fe9de8e203398ef0ac6e583b09cf" compoundref="_cyl_disk_8_h" startline="46" endline="51">get_mass</referencedby>
-        <referencedby refid="class_cyl_disk_1a69c0c5c4932ea5a27a4035693f77e7c0" compoundref="_cyl_disk_8_h" startline="60" endline="65">get_pot</referencedby>
-        <referencedby refid="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" compoundref="_cyl_disk_8_h" startline="87" endline="99">get_pot_dpot</referencedby>
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-        <type>double</type>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="23" column="18" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="23" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1ac786069b5009aaba3c29d12044f1b4f1" compoundref="_cyl_disk_8_h" startline="107" endline="110">get_max_radius</referencedby>
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-        <type>double</type>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="23" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="23" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1a0a7c0a769ddb247e134a4cf7197e992c" compoundref="_cyl_disk_8_h" startline="103" endline="106">get_min_radius</referencedby>
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-        <type>vector&lt; double &gt;</type>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1ae1834978ae1f35cccf035bde739a0100" compoundref="_cyl_disk_8_h" startline="53" endline="58">get_density</referencedby>
-        <referencedby refid="class_cyl_disk_1ad4ff5ae0adcc35a7e9326e87e48c43c2" compoundref="_cyl_disk_8_h" startline="68" endline="73">get_dpot</referencedby>
-        <referencedby refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" compoundref="_cyl_disk_8_h" startline="75" endline="85">get_dpot2</referencedby>
-        <referencedby refid="class_cyl_disk_1aea08fe9de8e203398ef0ac6e583b09cf" compoundref="_cyl_disk_8_h" startline="46" endline="51">get_mass</referencedby>
-        <referencedby refid="class_cyl_disk_1a69c0c5c4932ea5a27a4035693f77e7c0" compoundref="_cyl_disk_8_h" startline="60" endline="65">get_pot</referencedby>
-        <referencedby refid="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" compoundref="_cyl_disk_8_h" startline="87" endline="99">get_pot_dpot</referencedby>
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-        <referencedby refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" compoundref="_cyl_disk_8_h" startline="75" endline="85">get_dpot2</referencedby>
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-        <references refid="class_cyl_disk_1ae3d1fa808b1fdf1a280e37a163cd9a39" compoundref="_cyl_disk_8_h" startline="18">d</references>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="127" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="127" bodyend="130"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="117" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="117" bodyend="120"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double CylDisk::distf</definition>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="112" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="112" bodyend="115"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
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-        <references refid="class_cyl_disk_1ab50bd04c5cc065a02bd416b7e8a12753" compoundref="_cyl_disk_8_h" startline="22">dd</references>
-        <references refid="interp_8_h_1a72e302630a423bfa1c4bb0d0af8db14c">odd2</references>
-        <references refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" compoundref="_cyl_disk_8_h" startline="21">rlog</references>
-        <references refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" compoundref="_cyl_disk_8_h" startline="22">rr</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_disk_1ad4ff5ae0adcc35a7e9326e87e48c43c2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CylDisk::get_dpot</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_dpot</name>
-        <qualifiedname>CylDisk::get_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845">get_dpot</reimplements>
-        <param>
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-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="68" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="68" bodyend="73"/>
-        <references refid="interp_8_h_1aff85f732fb51d39630aea9fc48cf5c9d">drv2</references>
-        <references refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" compoundref="_cyl_disk_8_h" startline="22">pp</references>
-        <references refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" compoundref="_cyl_disk_8_h" startline="21">rlog</references>
-        <references refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" compoundref="_cyl_disk_8_h" startline="22">rr</references>
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-      <memberdef kind="function" id="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CylDisk::get_dpot2</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_dpot2</name>
-        <qualifiedname>CylDisk::get_dpot2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a77b9bb693457557d379167ca0ca2caae">get_dpot2</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="75" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="75" bodyend="85"/>
-        <references refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" compoundref="_cyl_disk_8_h" startline="23">dr</references>
-        <references refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" compoundref="_cyl_disk_8_h" startline="28">NUMR</references>
-        <references refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" compoundref="_cyl_disk_8_h" startline="22">pp</references>
-        <references refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" compoundref="_cyl_disk_8_h" startline="21">rlog</references>
-        <references refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" compoundref="_cyl_disk_8_h" startline="22">rr</references>
-        <references refid="interp_8_h_1aef43f105ecadc0dd19c4be25d0398614">Vlocate</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_disk_1aea08fe9de8e203398ef0ac6e583b09cf" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CylDisk::get_mass</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>CylDisk::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465">get_mass</reimplements>
-        <param>
-          <type>const double</type>
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-        <briefdescription>
-<para>Access the profile. </para>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="46" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="46" bodyend="51"/>
-        <references refid="class_cyl_disk_1a5a00b733696c58f0929af0a377c1aca7" compoundref="_cyl_disk_8_h" startline="22">mm</references>
-        <references refid="interp_8_h_1a72e302630a423bfa1c4bb0d0af8db14c">odd2</references>
-        <references refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" compoundref="_cyl_disk_8_h" startline="21">rlog</references>
-        <references refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" compoundref="_cyl_disk_8_h" startline="22">rr</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_disk_1ac786069b5009aaba3c29d12044f1b4f1" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CylDisk::get_max_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_max_radius</name>
-        <qualifiedname>CylDisk::get_max_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a87510a095e6b9533812eba57c7ca862c">get_max_radius</reimplements>
-        <param>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="107" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="107" bodyend="110"/>
-        <references refid="class_cyl_disk_1ae58a1c9cc465a7b980b83cbadec2b366" compoundref="_cyl_disk_8_h" startline="23">rmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_disk_1a0a7c0a769ddb247e134a4cf7197e992c" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CylDisk::get_min_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_min_radius</name>
-        <qualifiedname>CylDisk::get_min_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab304897a450a2d79f4e27841526b70e9">get_min_radius</reimplements>
-        <param>
-          <type>void</type>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="103" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="103" bodyend="106"/>
-        <references refid="class_cyl_disk_1a7c268fc3b7230eca1337d96438186c9c" compoundref="_cyl_disk_8_h" startline="23">rmin</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_disk_1a69c0c5c4932ea5a27a4035693f77e7c0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double CylDisk::get_pot</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>CylDisk::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="60" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="60" bodyend="65"/>
-        <references refid="interp_8_h_1a72e302630a423bfa1c4bb0d0af8db14c">odd2</references>
-        <references refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" compoundref="_cyl_disk_8_h" startline="22">pp</references>
-        <references refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" compoundref="_cyl_disk_8_h" startline="21">rlog</references>
-        <references refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" compoundref="_cyl_disk_8_h" startline="22">rr</references>
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-      <memberdef kind="function" id="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>void CylDisk::get_pot_dpot</definition>
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-        <name>get_pot_dpot</name>
-        <qualifiedname>CylDisk::get_pot_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a4fc766458a1f45b3ece0410b2c85b632">get_pot_dpot</reimplements>
-        <param>
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-        <param>
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-        <param>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" line="87" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H" bodystart="87" bodyend="99"/>
-        <references refid="class_cyl_disk_1a342c906c2bf5cc8c1d1d74d3bedb1413" compoundref="_cyl_disk_8_h" startline="23">dr</references>
-        <references refid="interp_8_h_1aff85f732fb51d39630aea9fc48cf5c9d">drv2</references>
-        <references refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" compoundref="_cyl_disk_8_h" startline="28">NUMR</references>
-        <references refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" compoundref="_cyl_disk_8_h" startline="22">pp</references>
-        <references refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" compoundref="_cyl_disk_8_h" startline="21">rlog</references>
-        <references refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" compoundref="_cyl_disk_8_h" startline="22">rr</references>
-        <references refid="interp_8_h_1aef43f105ecadc0dd19c4be25d0398614">Vlocate</references>
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-    </briefdescription>
-    <detaileddescription>
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-    <inheritancegraph>
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-    <listofallmembers>
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-      <member refid="class_cyl_disk_1af0e30c235213217773f8d8267642b9e9" prot="public" virt="virtual"><scope>CylDisk</scope><name>dfde</name></member>
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-      <member refid="class_axi_sym_model_1acf573aca18c8e1687d639133d5710ea7" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>Emin_grid</name></member>
-      <member refid="class_axi_sym_model_1aeda764e1f1145cf03bc79e89cb5f28ee" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>Gauss</name></member>
-      <member refid="class_axi_sym_model_1af60c7d2a97b4e2242ece29ba77f990a8" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_E</name></member>
-      <member refid="class_axi_sym_model_1a85758608cec039affbc42c2ad3390056" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_ecut</name></member>
-      <member refid="class_axi_sym_model_1a89d1c8c1a334e17d164229404284b1aa" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_EJ</name></member>
-      <member refid="class_axi_sym_model_1ad3e1a1fcfe55dfa0f9332673faaad460" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_firstime</name></member>
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-      <member refid="class_axi_sym_model_1a16b08425c760dcb7fe24635c05a4d9b1" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_firstime_jeans</name></member>
-      <member refid="class_axi_sym_model_1a5b9f30c0297a19e48806f53aa6b9d68e" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_fmax</name></member>
-      <member refid="class_axi_sym_model_1aaf38968f265e18cf20e403041279435c" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_fomax</name></member>
-      <member refid="class_axi_sym_model_1a2b491db27d15b7b20b6f9ab473373d90" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_itmax</name></member>
-      <member refid="class_axi_sym_model_1a739b1e9027c37122906c3f38d88b3a17" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_K</name></member>
-      <member refid="class_axi_sym_model_1a1df0ddafb9d52556b7306aac0b4d1390" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_kmin</name></member>
-      <member refid="class_axi_sym_model_1a2ddd661afb64be0edc0c903cc1d0d6a3" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_logr</name></member>
-      <member refid="class_axi_sym_model_1a21d0612b687d8f4e2fa57f45ebea5ad9" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_mass</name></member>
-      <member refid="class_axi_sym_model_1ac697c676c4cdf1a2f6fd9aaa0afc3cf1" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_N</name></member>
-      <member refid="class_axi_sym_model_1a274294584539a1bf61ddcb08d28385e4" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_orb</name></member>
-      <member refid="class_axi_sym_model_1a29297280d1fb4603b2138a7a2ede86f4" prot="public" virt="virtual"><scope>CylDisk</scope><name>gen_point</name></member>
-      <member refid="class_axi_sym_model_1a8ec2585dc6f33e2ebae4f8dd3d22fc5a" prot="public" virt="virtual"><scope>CylDisk</scope><name>gen_point</name></member>
-      <member refid="class_axi_sym_model_1a5e4cb31e8463807b1b14b3858c5c03b2" prot="public" virt="virtual"><scope>CylDisk</scope><name>gen_point</name></member>
-      <member refid="class_axi_sym_model_1a65a0d8629fdcf8dcb1e3bcf17eee2fd0" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_point_2d</name></member>
-      <member refid="class_axi_sym_model_1a18ecb1fa667cf977306b34d3dab34ed1" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_point_2d</name></member>
-      <member refid="class_axi_sym_model_1a98fb5e4481e2ee8ecc7a47db1ae33f44" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_point_3d</name></member>
-      <member refid="class_axi_sym_model_1a20602aa25410c1f5d2bc3bf017899049" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_point_3d</name></member>
-      <member refid="class_axi_sym_model_1adcafd558768aeb72e0cc483f231a1be5" prot="public" virt="virtual"><scope>CylDisk</scope><name>gen_point_jeans</name></member>
-      <member refid="class_axi_sym_model_1a13d7af1df29796004e2d14194d8d8c7a" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_point_jeans_3d</name></member>
-      <member refid="class_axi_sym_model_1a35aead49704365788684b280e04c21f2" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>gen_rloc</name></member>
-      <member refid="class_axi_sym_model_1a0dd4a002aead3430280c95b84a33848c" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_rmin</name></member>
-      <member refid="class_axi_sym_model_1a8fd26f16e980f9ca09582c43d37d556b" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_tolE</name></member>
-      <member refid="class_axi_sym_model_1a34258a7b205c15211b94d68869ff481a" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>gen_tolK</name></member>
-      <member refid="class_axi_sym_model_1a524ea3beb7a799ffa2c5f90afbcf0bd7" prot="public" virt="virtual"><scope>CylDisk</scope><name>gen_velocity</name></member>
-      <member refid="class_cyl_disk_1ae1834978ae1f35cccf035bde739a0100" prot="public" virt="virtual"><scope>CylDisk</scope><name>get_density</name></member>
-      <member refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc" prot="public" virt="virtual" ambiguityscope="AxiSymModel::"><scope>CylDisk</scope><name>get_density</name></member>
-      <member refid="class_cyl_disk_1ad4ff5ae0adcc35a7e9326e87e48c43c2" prot="public" virt="virtual"><scope>CylDisk</scope><name>get_dpot</name></member>
-      <member refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" prot="public" virt="virtual"><scope>CylDisk</scope><name>get_dpot2</name></member>
-      <member refid="class_cyl_disk_1aea08fe9de8e203398ef0ac6e583b09cf" prot="public" virt="virtual"><scope>CylDisk</scope><name>get_mass</name></member>
-      <member refid="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787" prot="public" virt="virtual" ambiguityscope="AxiSymModel::"><scope>CylDisk</scope><name>get_mass</name></member>
-      <member refid="class_cyl_disk_1ac786069b5009aaba3c29d12044f1b4f1" prot="public" virt="virtual"><scope>CylDisk</scope><name>get_max_radius</name></member>
-      <member refid="class_cyl_disk_1a0a7c0a769ddb247e134a4cf7197e992c" prot="public" virt="virtual"><scope>CylDisk</scope><name>get_min_radius</name></member>
-      <member refid="class_cyl_disk_1a69c0c5c4932ea5a27a4035693f77e7c0" prot="public" virt="virtual"><scope>CylDisk</scope><name>get_pot</name></member>
-      <member refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc" prot="public" virt="virtual" ambiguityscope="AxiSymModel::"><scope>CylDisk</scope><name>get_pot</name></member>
-      <member refid="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" prot="public" virt="virtual"><scope>CylDisk</scope><name>get_pot_dpot</name></member>
-      <member refid="class_axi_sym_model_1a9e96775fb63f7ad15e20ed12ada30e66" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>Jmax</name></member>
-      <member refid="class_axi_sym_model_1a95335dec87e9759cfb620c1cafb10a83" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>Kgrid</name></member>
-      <member refid="class_cyl_disk_1a5a00b733696c58f0929af0a377c1aca7" prot="private" virt="non-virtual"><scope>CylDisk</scope><name>mm</name></member>
-      <member refid="class_mass_model_1acf360c000464aca6299bc47894672d70" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>ModelID</name></member>
-      <member refid="class_axi_sym_model_1a793a2dff2246be92c1e4b2ff900087a1" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>numj</name></member>
-      <member refid="class_axi_sym_model_1a0c33462222d9cb53229f9572b07cf792" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>numr</name></member>
-      <member refid="class_cyl_disk_1ae7fe915b285ac150a5f2a73b11d6dafd" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>NUMR</name></member>
-      <member refid="class_cyl_disk_1a731dcfcde91257bfd153ddd106240fac" prot="private" virt="non-virtual"><scope>CylDisk</scope><name>pp</name></member>
-      <member refid="class_axi_sym_model_1a1f18cc5ef08cdb02dcf6d794410c04f6" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>Rgrid</name></member>
-      <member refid="class_cyl_disk_1a7cc9a87e8ee93e542068e4696b8877ea" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>RLOG</name></member>
-      <member refid="class_cyl_disk_1a6a91d3c1451f8c9d2add04af68e37179" prot="private" virt="non-virtual"><scope>CylDisk</scope><name>rlog</name></member>
-      <member refid="class_cyl_disk_1ae58a1c9cc465a7b980b83cbadec2b366" prot="private" virt="non-virtual"><scope>CylDisk</scope><name>rmax</name></member>
-      <member refid="class_cyl_disk_1a7c268fc3b7230eca1337d96438186c9c" prot="private" virt="non-virtual"><scope>CylDisk</scope><name>rmin</name></member>
-      <member refid="class_cyl_disk_1aad9d74d1bc5c93560d5424e9a185700a" prot="private" virt="non-virtual"><scope>CylDisk</scope><name>rr</name></member>
-      <member refid="class_axi_sym_model_1acb659b6dc20ae1410997e69144677423" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>set_Ecut</name></member>
-      <member refid="class_axi_sym_model_1a17660c094f1c143f779c7ce7e667de86" prot="public" virt="non-virtual"><scope>CylDisk</scope><name>set_itmax</name></member>
-      <member refid="class_cyl_disk_1a647a54ae7b8de7f60bc31a05daa6ba3a" prot="private" virt="non-virtual"><scope>CylDisk</scope><name>setup_model</name></member>
-      <member refid="class_axi_sym_model_1a4d9c94aa4ebf8308dbb660e9f53093e1" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>Unit</name></member>
-      <member refid="class_axi_sym_model_1a624c90f1d36963b7b023b9818a41b43b" prot="protected" virt="non-virtual"><scope>CylDisk</scope><name>wrvector</name></member>
-      <member refid="class_axi_sym_model_1ac9a6c290463cfe45d95656d37c0c45f8" prot="public" virt="virtual"><scope>CylDisk</scope><name>~AxiSymModel</name></member>
-      <member refid="class_mass_model_1a95c0338ca07d1b2ea284c3c2605dc9b8" prot="public" virt="virtual"><scope>CylDisk</scope><name>~MassModel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_cyl_e_x_p.xml b/doxyxml/class_cyl_e_x_p.xml
deleted file mode 100644
index 0cbab7d..0000000
--- a/doxyxml/class_cyl_e_x_p.xml
+++ /dev/null
@@ -1,754 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_cyl_e_x_p" kind="class" language="C++" prot="public">
-    <compoundname>CylEXP</compoundname>
-    <basecompoundref refid="class_emp_cyl_s_l" prot="public" virt="non-virtual">EmpCylSL</basecompoundref>
-    <includes refid="_cyl_e_x_p_8_h" local="no">CylEXP.H</includes>
-    <sectiondef kind="friend">
-      <memberdef kind="friend" id="class_cyl_e_x_p_1af10773c43b75882cad4b616a1592e455" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>class</type>
-        <definition>friend class Cylinder</definition>
-        <argsstring></argsstring>
-        <name>Cylinder</name>
-        <qualifiedname>CylEXP::Cylinder</qualifiedname>
-        <param>
-          <type><ref refid="class_cylinder" kindref="compound">Cylinder</ref></type>
-        </param>
-        <briefdescription>
-<para>Allow access to differ arrays for multistepping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="23" column="16" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_cyl_e_x_p_1ae00f6b7ef25a22da2c227e5dba1035f3" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; CylEXP::differC1</definition>
-        <argsstring></argsstring>
-        <name>differC1</name>
-        <qualifiedname>CylEXP::differC1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="29" column="24" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cyl_e_x_p_1a38a7bb25261a63caccc74fb3e0026259" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; CylEXP::differS1</definition>
-        <argsstring></argsstring>
-        <name>differS1</name>
-        <qualifiedname>CylEXP::differS1</qualifiedname>
-        <briefdescription>
-<para>For updating levels. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="29" column="15" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cyl_e_x_p_1a371f94b590abfdd2c91f037c66e496f9" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; CylEXP::workC</definition>
-        <argsstring></argsstring>
-        <name>workC</name>
-        <qualifiedname>CylEXP::workC</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="30" column="22" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cyl_e_x_p_1a838e7c28aeedd42561589cc65ec4210f" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; CylEXP::workC1</definition>
-        <argsstring></argsstring>
-        <name>workC1</name>
-        <qualifiedname>CylEXP::workC1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="30" column="15" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cyl_e_x_p_1a2009aaf7329f3ed9d46366aca2b723f1" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; CylEXP::workS</definition>
-        <argsstring></argsstring>
-        <name>workS</name>
-        <qualifiedname>CylEXP::workS</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="30" column="35" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cyl_e_x_p_1a6981dfcd5a2dad2d91a330fb85d2b0fa" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; CylEXP::workS1</definition>
-        <argsstring></argsstring>
-        <name>workS1</name>
-        <qualifiedname>CylEXP::workS1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="30" column="28" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_cyl_e_x_p_1a8dfeca51749f0a693c85c96ead4f612b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void CylEXP::compute_multistep_coefficients</definition>
-        <argsstring>(unsigned mlevel)</argsstring>
-        <name>compute_multistep_coefficients</name>
-        <qualifiedname>CylEXP::compute_multistep_coefficients</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>mlevel</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Extrapolate and sum coefficents per multistep level to get a complete set of coefficients for force evaluation at an intermediate time step </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="67" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_e_x_p_1afac42c8400352832e29e7761b2358926" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>CylEXP::CylEXP</definition>
-        <argsstring>()</argsstring>
-        <name>CylEXP</name>
-        <qualifiedname>CylEXP::CylEXP</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="35" column="3" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="35" bodyend="35"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_e_x_p_1a70ad0e8775057e132fc6be10827457b9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>CylEXP::CylEXP</definition>
-        <argsstring>(int numr, int lmax, int mmax, int nord, double ascale, double hscale, int Nodd=-1, std::string cachename=&quot;&quot;)</argsstring>
-        <name>CylEXP</name>
-        <qualifiedname>CylEXP::CylEXP</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nord</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ascale</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>hscale</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>Nodd</declname>
-          <defval>-1</defval>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>cachename</declname>
-          <defval>&quot;&quot;</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor with parameters</para>
-<para><simplesect kind="par"><title>Parameters:</title><para></para>
-</simplesect>
-<parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>multistep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of coefficient levels for n-body</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the spherical radial order of the input basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the spherical angular order of the input basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the output aximuthal order for the EOF basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nord</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the output radial order for the EOF basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ascale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the target disk scale LENGTH</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hscale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the target disk scale HEIGHT</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nodd</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of vertically odd parity basis functions. If unspecified, you get eigenvalue order. </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="59" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_e_x_p_1ae6ddeb5cd8ba08c653a66c1bae0a79d9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void CylEXP::multistep_debug</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_debug</name>
-        <qualifiedname>CylEXP::multistep_debug</qualifiedname>
-        <briefdescription>
-<para>Print debug info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="81" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_e_x_p_1a9b75afd20f0a3811a5574d8670d9ebe9" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void CylEXP::multistep_reset</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_reset</name>
-        <qualifiedname>CylEXP::multistep_reset</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="77" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_e_x_p_1a7fac2126384f18a75277e07831d9bc78" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void CylEXP::multistep_update</definition>
-        <argsstring>(int from, int to, double r, double z, double phi, double mass, int id)</argsstring>
-        <name>multistep_update</name>
-        <qualifiedname>CylEXP::multistep_update</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>from</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>to</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="75" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_e_x_p_1a4d181f13890c08e680afa2fdf1dc1563" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void CylEXP::multistep_update_begin</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_begin</name>
-        <qualifiedname>CylEXP::multistep_update_begin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step coefficient table when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="74" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cyl_e_x_p_1ac2125193fb847b6d09947cf56f356550" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void CylEXP::multistep_update_finish</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_finish</name>
-        <qualifiedname>CylEXP::multistep_update_finish</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="76" column="16"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Encapsulatates a <ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref> (Sturm-Liouville basis) for use as force method.</para>
-<para>This provides the extra routines needed for n-body integration. See <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref> in the exputils directory. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>CylEXP</label>
-        <link refid="class_cyl_e_x_p"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>EmpCylSL</label>
-        <link refid="class_emp_cyl_s_l"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="3">
-        <label>CylCoefHeader</label>
-        <link refid="struct_cyl_coef_header"/>
-      </node>
-      <node id="1">
-        <label>CylEXP</label>
-        <link refid="class_cyl_e_x_p"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>EmpCylSL</label>
-        <link refid="class_emp_cyl_s_l"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>coefheadercyl</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cosL</edgelabel>
-          <edgelabel>cosN</edgelabel>
-          <edgelabel>sinL</edgelabel>
-          <edgelabel>sinN</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>covV</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>covM</edgelabel>
-        </childnode>
-        <childnode refid="10" relation="usage">
-          <edgelabel>densRg</edgelabel>
-          <edgelabel>massRg</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>EmpCylSL::CoefMatrix</label>
-        <link refid="struct_emp_cyl_s_l_1_1_coef_matrix"/>
-        <childnode refid="9" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>EmpCylSL::CoefVector</label>
-        <link refid="struct_emp_cyl_s_l_1_1_coef_vector"/>
-        <childnode refid="7" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>EmpCylSL::MstepArray</label>
-        <link refid="struct_emp_cyl_s_l_1_1_mstep_array"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>Interp1d</label>
-        <link refid="class_interp1d"/>
-      </node>
-      <node id="10">
-        <label>Linear1d</label>
-        <link refid="class_linear1d"/>
-        <childnode refid="11" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>std::vector&lt; VectorD2ptr &gt;</label>
-      </node>
-      <node id="9">
-        <label>std::vector&lt; std::vector&lt; MatrixM &gt; &gt;</label>
-      </node>
-      <node id="7">
-        <label>std::vector&lt; std::vector&lt; VectorM &gt; &gt;</label>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/CylEXP.H" line="20" column="1" bodyfile="/home/weinberg/Projects/EXP/src/CylEXP.H" bodystart="21" bodyend="83"/>
-    <listofallmembers>
-      <member refid="class_emp_cyl_s_l_1aa73f0cb40abc6958380212b49e620302" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>accum_cos</name></member>
-      <member refid="class_emp_cyl_s_l_1a7a9a5f30a82f1540107d6e5c0dcb3ccd" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>accum_sin</name></member>
-      <member refid="class_emp_cyl_s_l_1a247309c8de363bdacd60769343ca5a54" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulate</name></member>
-      <member refid="class_emp_cyl_s_l_1a29c9054e96a255d4fba26ad01b79f553" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulate</name></member>
-      <member refid="class_emp_cyl_s_l_1ab7e13975e0b5e76a90d62b8173b2fd3a" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulate_eof</name></member>
-      <member refid="class_emp_cyl_s_l_1a922d558463e3dd98e3d1bba0b193797c" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulate_eof</name></member>
-      <member refid="class_emp_cyl_s_l_1a315b273faa77c0ce4a0d8470af77c31d" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulate_eof_thread</name></member>
-      <member refid="class_emp_cyl_s_l_1a03c78efa441af75c60e8165e0c227b3d" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>accumulate_eof_thread_call</name></member>
-      <member refid="class_emp_cyl_s_l_1a2eca026c8c9a47db68dde26ff99ca5e1" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulate_thread</name></member>
-      <member refid="class_emp_cyl_s_l_1aa4f6f96e4ffed81950ee435d661f98fc" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>accumulate_thread_call</name></member>
-      <member refid="class_emp_cyl_s_l_1ae17f2940466adeeab60415fbb9a0a903" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulated_dens_eval</name></member>
-      <member refid="class_emp_cyl_s_l_1a7f7f8c1328be01fbcfd2257ec617dae6" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulated_eval</name></member>
-      <member refid="class_emp_cyl_s_l_1a18e0d78655361a9a734ad2e6df769d4d" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>accumulated_midplane_eval</name></member>
-      <member refid="class_emp_cyl_s_l_1a63fbc7a58c18306cf8ff7b9cd1f1acd7" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>ASCALE</name></member>
-      <member refid="class_emp_cyl_s_l_1a686c18b7deb23a96b0608d96a7d13164" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>AxiDiskPtr</name></member>
-      <member refid="class_emp_cyl_s_l_1a895b2b9cd9a80389b0a8e918bedee390" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cache_grid</name></member>
-      <member refid="class_emp_cyl_s_l_1ab771f6442cb98992024f528d9711004e" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cachefile</name></member>
-      <member refid="class_emp_cyl_s_l_1a862b82f17985a1002130ea7d735f3210" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>cacheInfo</name></member>
-      <member refid="class_emp_cyl_s_l_1aaae6d0d738e28ae17f0450ac8888ff38" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cmagic</name></member>
-      <member refid="class_emp_cyl_s_l_1a69cea546b093407c96f564e9e4fc132a" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>CMAPR</name></member>
-      <member refid="class_emp_cyl_s_l_1a56526a140c4c34248902966681124db2" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>CMAPZ</name></member>
-      <member refid="class_emp_cyl_s_l_1aa6b0d44cd165d3e014ba1f11f00167c9" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>coefheadercyl</name></member>
-      <member refid="class_emp_cyl_s_l_1af20a77b1f4fd2c8e813d98711460e695" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>coefs_made</name></member>
-      <member refid="class_emp_cyl_s_l_1a010b121e9d91a34a9698e670b6bbb7bc" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>coefs_made_all</name></member>
-      <member refid="class_emp_cyl_s_l_1a0405d6102726bae6b522efd162ff8d4e" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>compare_basis</name></member>
-      <member refid="class_emp_cyl_s_l_1a9261c96b5c2f59bf357e9eff0e0f005d" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>compute_eof_grid</name></member>
-      <member refid="class_emp_cyl_s_l_1a57d043d255d6b3a9a30c2be6bbbcb329" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>compute_even_odd</name></member>
-      <member refid="class_cyl_e_x_p_1a8dfeca51749f0a693c85c96ead4f612b" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>compute_multistep_coefficients</name></member>
-      <member refid="class_emp_cyl_s_l_1a72d8726715739ecffdfe29e5c8569cbc" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>ContribArray</name></member>
-      <member refid="class_emp_cyl_s_l_1ab415413271f771c89d825134bb946ee3" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cosL</name></member>
-      <member refid="class_emp_cyl_s_l_1ab17784aafefb2d23b269b10b0aebba76" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cosm</name></member>
-      <member refid="class_emp_cyl_s_l_1aa21c6a9576dc5d76cba066a238b94409" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cosN</name></member>
-      <member refid="class_emp_cyl_s_l_1a9c0aa23a0d1b44c9c421d87b1b64a0b4" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>covM</name></member>
-      <member refid="class_emp_cyl_s_l_1a7b6c8bcf8ee3a9ef0c055fc98a139fd6" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>covV</name></member>
-      <member refid="class_emp_cyl_s_l_1a791dca5c81aa700228f61cbe00327113" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>create_deprojection</name></member>
-      <member refid="class_cyl_e_x_p_1afac42c8400352832e29e7761b2358926" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>CylEXP</name></member>
-      <member refid="class_cyl_e_x_p_1a70ad0e8775057e132fc6be10827457b9" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>CylEXP</name></member>
-      <member refid="class_cyl_e_x_p_1af10773c43b75882cad4b616a1592e455" prot="private" virt="non-virtual"><scope>CylEXP</scope><name>Cylinder</name></member>
-      <member refid="class_emp_cyl_s_l_1ac5b718c98b51ee729a87c4e4d3add432" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cylmass</name></member>
-      <member refid="class_emp_cyl_s_l_1a9ced854d386d7b1306e498ca4eb54827" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cylmass1</name></member>
-      <member refid="class_emp_cyl_s_l_1a65e2efdbf4893d31dfc6e466739133c7" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>cylmass_made</name></member>
-      <member refid="class_emp_cyl_s_l_1a1224b24b83979fb27ddfc1bd4aecc29e" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>d</name></member>
-      <member refid="class_emp_cyl_s_l_1a0e10a3d34155f376150a0ece8a85acbb" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>d_xi_to_r</name></member>
-      <member refid="class_emp_cyl_s_l_1a142075bc56f2792e7f9427a1b20fe43e" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>d_y_to_z</name></member>
-      <member refid="class_emp_cyl_s_l_1a0372fb0957caf5a86e74d4f594bff96f" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>defSampT</name></member>
-      <member refid="class_emp_cyl_s_l_1a6123da82bfd1ca939d5392260118200a" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>dend</name></member>
-      <member refid="class_emp_cyl_s_l_1a7e56db72abcf0d0eec07f15eb2376032" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>densC</name></member>
-      <member refid="class_emp_cyl_s_l_1adc40eee109b96edacb4bcf58e34cf881" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>densR</name></member>
-      <member refid="class_emp_cyl_s_l_1a8a6c84c7601d6a29836df1456dcf59c6" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>densRg</name></member>
-      <member refid="class_emp_cyl_s_l_1ae05a132072a42c08fdfbac5cdd4117b0" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>densS</name></member>
-      <member refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa67567924e95e58ef6bb9ecd65d96a077" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>Deproject</name></member>
-      <member refid="class_emp_cyl_s_l_1af4346551a09d18530b7cd80cec281110" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>determine_acceleration_and_potential</name></member>
-      <member refid="class_emp_cyl_s_l_1a2b600702935611bdd72f5c7c7094fc53" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>determine_coefficients</name></member>
-      <member refid="class_emp_cyl_s_l_1ae0b0f702edf40c1ed5bc409e7c777bde" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>dfac</name></member>
-      <member refid="class_cyl_e_x_p_1ae00f6b7ef25a22da2c227e5dba1035f3" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>differC1</name></member>
-      <member refid="class_cyl_e_x_p_1a38a7bb25261a63caccc74fb3e0026259" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>differS1</name></member>
-      <member refid="class_emp_cyl_s_l_1a02a79620604c800c332acda6b041447f" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dlegendre_R</name></member>
-      <member refid="class_emp_cyl_s_l_1acaa96903f06d4b447c75602ae1417354" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>dlegs</name></member>
-      <member refid="class_emp_cyl_s_l_1af7eb74bd37528e0244aba778dc2d40c2" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>dpot</name></member>
-      <member refid="class_emp_cyl_s_l_1a6fbec197b1432a4ba8b565b613953add" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dump_basis</name></member>
-      <member refid="class_emp_cyl_s_l_1a667aeb1e86302010a4d0d9207e9b24fb" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dump_coefs</name></member>
-      <member refid="class_emp_cyl_s_l_1aa3d995b136f2f8c713c3551dd14577a0" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dump_coefs_binary</name></member>
-      <member refid="class_emp_cyl_s_l_1a232a9a2eac79772432cc3fc033ef46b7" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dump_eof_file</name></member>
-      <member refid="class_emp_cyl_s_l_1a0e97a59d8de16ea6ed7059406a4dc4e2" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dump_images</name></member>
-      <member refid="class_emp_cyl_s_l_1af268662f8998695185625f734f028a71" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dump_images_basis</name></member>
-      <member refid="class_emp_cyl_s_l_1a85056f370f790a6f05c38319d5e407ff" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dump_images_basis_eof</name></member>
-      <member refid="class_emp_cyl_s_l_1a2f3e7464c373fa3c9d0a782b1e2187ff" prot="public" virt="non-virtual"><scope>CylEXP</scope><name>dump_images_basis_pca</name></member>
-      <member refid="class_emp_cyl_s_l_1a76b66e4f3961b92a33be7a3a1d8716a6" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>dX</name></member>
-      <member refid="class_emp_cyl_s_l_1ac063fba4503a8805591e93a6a753e5e5" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>dY</name></member>
-      <member refid="class_emp_cyl_s_l_1a75221e0fd5253d5bb5ad4c1565a76849" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>ef</name></member>
-      <member refid="class_emp_cyl_s_l_1a007a5ef3ae95a25e61a17b62c0fb7333" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>efE</name></member>
-      <member refid="class_emp_cyl_s_l_1adee991b5fc63a5052744c23fadca4904" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>efO</name></member>
-      <member refid="class_emp_cyl_s_l_1aa15dc03935856aaebdb4ee70778b6877" prot="protected" virt="non-virtual"><scope>CylEXP</scope><name>eigen_problem</name></member>
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diff --git a/doxyxml/class_cylinder.xml b/doxyxml/class_cylinder.xml
deleted file mode 100644
index 2bfd741..0000000
--- a/doxyxml/class_cylinder.xml
+++ /dev/null
@@ -1,4020 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_cylinder" kind="class" language="C++" prot="public">
-    <compoundname>Cylinder</compoundname>
-    <basecompoundref refid="class_basis" prot="public" virt="non-virtual">Basis</basecompoundref>
-    <basecompoundref refid="class_basis" prot="public" virt="non-virtual">Basis</basecompoundref>
-    <includes refid="_cylinder_8_h" local="no">Cylinder.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_cylinder_1a1d58bf255110415e1931d8db2ad0ea76" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Cylinder::acut</definition>
-        <argsstring></argsstring>
-        <name>acut</name>
-        <qualifiedname>Cylinder::acut</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="130" column="36" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="130" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cylinder_1ace6e78eca47b4eeb70c39cbb5faa7382" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Cylinder::acyl</definition>
-        <argsstring></argsstring>
-        <name>acyl</name>
-        <qualifiedname>Cylinder::acyl</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="130" column="31" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="130" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1a9c5152a2d3c9f1303edbd4583e852bf7" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Cylinder::ashift</definition>
-        <argsstring></argsstring>
-        <name>ashift</name>
-        <qualifiedname>Cylinder::ashift</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <type>std::string</type>
-        <definition>std::string Cylinder::cachename</definition>
-        <argsstring></argsstring>
-        <name>cachename</name>
-        <qualifiedname>Cylinder::cachename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>int</type>
-        <definition>int Cylinder::cmapR</definition>
-        <argsstring></argsstring>
-        <name>cmapR</name>
-        <qualifiedname>Cylinder::cmapR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>int</type>
-        <definition>int Cylinder::cmapZ</definition>
-        <argsstring></argsstring>
-        <name>cmapZ</name>
-        <qualifiedname>Cylinder::cmapZ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_cylinder_1a408307e5a429e0ba50cbd0b1aa55bd7f" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Cylinder::compute</definition>
-        <argsstring></argsstring>
-        <name>compute</name>
-        <qualifiedname>Cylinder::compute</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="137" column="38" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="137" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1a8c4a5ae2696883060a6f5880c207c6d3" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Cylinder::cylmass</definition>
-        <argsstring></argsstring>
-        <name>cylmass</name>
-        <qualifiedname>Cylinder::cylmass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="120" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="120" bodyend="-1"/>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt; double &gt; Cylinder::cylmass0</definition>
-        <argsstring></argsstring>
-        <name>cylmass0</name>
-        <qualifiedname>Cylinder::cylmass0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="124" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="124" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Cylinder::density</definition>
-        <argsstring></argsstring>
-        <name>density</name>
-        <qualifiedname>Cylinder::density</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="136" column="36" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="136" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Cylinder::dump_basis</definition>
-        <argsstring></argsstring>
-        <name>dump_basis</name>
-        <qualifiedname>Cylinder::dump_basis</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="137" column="27" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="137" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int Cylinder::eof</definition>
-        <argsstring></argsstring>
-        <name>eof</name>
-        <qualifiedname>Cylinder::eof</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="119" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="119" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Cylinder::eof_over</definition>
-        <argsstring></argsstring>
-        <name>eof_over</name>
-        <qualifiedname>Cylinder::eof_over</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="136" column="81" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="136" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Cylinder::EVEN_M</definition>
-        <argsstring></argsstring>
-        <name>EVEN_M</name>
-        <qualifiedname>Cylinder::EVEN_M</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="113" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="113" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Cylinder::expcond</definition>
-        <argsstring></argsstring>
-        <name>expcond</name>
-        <qualifiedname>Cylinder::expcond</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="113" column="8" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="113" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Cylinder::firstime</definition>
-        <argsstring></argsstring>
-        <name>firstime</name>
-        <qualifiedname>Cylinder::firstime</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="137" column="18" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="137" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Cylinder::firstime_coef</definition>
-        <argsstring></argsstring>
-        <name>firstime_coef</name>
-        <qualifiedname>Cylinder::firstime_coef</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="137" column="46" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="137" bodyend="-1"/>
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-        <type>std::vector&lt; Eigen::Vector3d &gt;</type>
-        <definition>std::vector&lt; Eigen::Vector3d &gt; Cylinder::frc</definition>
-        <argsstring></argsstring>
-        <name>frc</name>
-        <qualifiedname>Cylinder::frc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="122" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="122" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Cylinder::hcyl</definition>
-        <argsstring></argsstring>
-        <name>hcyl</name>
-        <qualifiedname>Cylinder::hcyl</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
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-        <name>hexp</name>
-        <qualifiedname>Cylinder::hexp</qualifiedname>
-        <briefdescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>int</type>
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-        <name>lmax</name>
-        <qualifiedname>Cylinder::lmax</qualifiedname>
-        <briefdescription>
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-        <type>int</type>
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-        <briefdescription>
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-        <briefdescription>
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-        <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
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-        <argsstring></argsstring>
-        <name>mix</name>
-        <qualifiedname>Cylinder::mix</qualifiedname>
-        <briefdescription>
-<para>For massive satellite simulations. </para>
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-        <type>double</type>
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-        <type>int</type>
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-        <type>int</type>
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-        <type>int</type>
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-        <qualifiedname>Cylinder::ncylodd</qualifiedname>
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-        <qualifiedname>Cylinder::ncylorder</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="130" column="26" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="130" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Cylinder::coefMaster</definition>
-        <argsstring></argsstring>
-        <name>coefMaster</name>
-        <qualifiedname>Cylinder::coefMaster</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Master node ships coefficients to hosts. True (default) implies that only the master node caches the coefficients for playback to save core memory. This is set in the config input using the &apos;coefMaster: bool&apos; parameter. Once I am sure that there are no algorithmic issues, I will remove this as an option. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="271" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="271" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1a536f1961a271262c6c73a2cd8b074eab" prot="protected" static="no" mutable="no">
-        <type>CoefClasses::CylCoefs</type>
-        <definition>CoefClasses::CylCoefs Cylinder::cylCoefs</definition>
-        <argsstring></argsstring>
-        <name>cylCoefs</name>
-        <qualifiedname>Cylinder::cylCoefs</qualifiedname>
-        <briefdescription>
-<para>Coefficient container instance for writing HDF5. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="301" column="25" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="301" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1a9c9f2064fd2e562d144da4dfab80a274" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cylinder::defSampT</definition>
-        <argsstring></argsstring>
-        <name>defSampT</name>
-        <qualifiedname>Cylinder::defSampT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="173" column="13" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="173" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1a6be0605baa5de43ff2578d2870818ac7" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Cylinder::lastPlayTime</definition>
-        <argsstring></argsstring>
-        <name>lastPlayTime</name>
-        <qualifiedname>Cylinder::lastPlayTime</qualifiedname>
-        <briefdescription>
-<para>Last playback coefficient evaluation time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="274" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="274" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; unsigned &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;unsigned&gt; &gt; Cylinder::occt</definition>
-        <argsstring></argsstring>
-        <name>occt</name>
-        <qualifiedname>Cylinder::occt</qualifiedname>
-        <briefdescription>
-<para>CUDA method for coefficient accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Test change level counts for deep debugging enabled by setting CYL_UPDATE_TABLE at the top of this header file or the command line </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="255" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="255" bodyend="-1"/>
-        <referencedby refid="class_cylinder_1a57315dc95a1b474e33109007f654c20e" compoundref="_cylinder_8_h" startline="443" endline="452">multistep_add_debug</referencedby>
-        <referencedby refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" compoundref="_cylinder_8_h" startline="417" endline="430">multistep_update_begin</referencedby>
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-      <memberdef kind="variable" id="class_cylinder_1a101160d0f44fbe28d1aa349338a6915f" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXcd</type>
-        <definition>Eigen::MatrixXcd Cylinder::P</definition>
-        <argsstring></argsstring>
-        <name>P</name>
-        <qualifiedname>Cylinder::P</qualifiedname>
-        <briefdescription>
-<para>Save data pointers. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="277" column="20" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="277" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1ab42b1b72eff2c9aca1fc2b4ba97ca968" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXcd</type>
-        <definition>Eigen::MatrixXcd Cylinder::P1</definition>
-        <argsstring></argsstring>
-        <name>P1</name>
-        <qualifiedname>Cylinder::P1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="277" column="22" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="277" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cylinder_1a8221adf2f7752878029457315306b6d3" prot="protected" static="no" mutable="no">
-        <type>std::shared_ptr&lt; CoefClasses::CylCoefs &gt;</type>
-        <definition>std::shared_ptr&lt; CoefClasses::CylCoefs &gt; Cylinder::playback</definition>
-        <argsstring></argsstring>
-        <name>playback</name>
-        <qualifiedname>Cylinder::playback</qualifiedname>
-        <briefdescription>
-<para>CUDA method for coefficient accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Coefficient playback instance. Using shared_ptr to avoid constructing a simple pointer or null instance </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="263" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="263" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_cylinder_1abee587361c163c331bd1ddce15772554" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Cylinder::sampT</definition>
-        <argsstring></argsstring>
-        <name>sampT</name>
-        <qualifiedname>Cylinder::sampT</qualifiedname>
-        <briefdescription>
-<para>For variance subsampling. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="173" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="173" bodyend="-1"/>
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-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>static const std::set&lt; std::string &gt; Cylinder::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>Cylinder::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="304" column="25" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="304" bodyend="-1"/>
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-        <type>pthread_mutex_t</type>
-        <definition>static pthread_mutex_t Cylinder::cos_coef_lock</definition>
-        <argsstring></argsstring>
-        <name>cos_coef_lock</name>
-        <qualifiedname>Cylinder::cos_coef_lock</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="310" column="36" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="310" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1ac4604b06d6359a220b903dd5b5ef05b3" prot="public" static="yes" mutable="no">
-        <type>pthread_mutex_t</type>
-        <definition>static pthread_mutex_t Cylinder::sin_coef_lock</definition>
-        <argsstring></argsstring>
-        <name>sin_coef_lock</name>
-        <qualifiedname>Cylinder::sin_coef_lock</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="310" column="50" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="310" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_cylinder_1a9997b96fd22bf7f5d9990cb5dbfdcfb9" prot="public" static="yes" mutable="no">
-        <type>pthread_mutex_t</type>
-        <definition>static pthread_mutex_t Cylinder::used_lock</definition>
-        <argsstring></argsstring>
-        <name>used_lock</name>
-        <qualifiedname>Cylinder::used_lock</qualifiedname>
-        <briefdescription>
-<para>Mutexes for multithreading. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="310" column="26" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="310" bodyend="-1"/>
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-    </sectiondef>
-    <sectiondef kind="private-func">
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-        <type>void</type>
-        <definition>void Cylinder::compute_grid_mass</definition>
-        <argsstring>()</argsstring>
-        <name>compute_grid_mass</name>
-        <qualifiedname>Cylinder::compute_grid_mass</qualifiedname>
-        <briefdescription>
-<para>Manual computation of on-grid mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="168" column="8"/>
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-      <memberdef kind="function" id="class_cylinder_1a301c653a9d52036222cc9e80d75ef5df" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::compute_grid_mass</definition>
-        <argsstring>()</argsstring>
-        <name>compute_grid_mass</name>
-        <qualifiedname>Cylinder::compute_grid_mass</qualifiedname>
-        <briefdescription>
-<para>Manual computation of on-grid mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="176" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::compute_multistep_coefficients</definition>
-        <argsstring>()</argsstring>
-        <name>compute_multistep_coefficients</name>
-        <qualifiedname>Cylinder::compute_multistep_coefficients</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Extrapolate and sum coefficents per multistep level to get a complete set of coefficients for force evaluation at an intermediate time step </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="159" column="8"/>
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-      <memberdef kind="function" id="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::compute_multistep_coefficients</definition>
-        <argsstring>()</argsstring>
-        <name>compute_multistep_coefficients</name>
-        <qualifiedname>Cylinder::compute_multistep_coefficients</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Extrapolate and sum coefficents per multistep level to get a complete set of coefficients for force evaluation at an intermediate time step </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="159" column="8" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="159" bodyend="167"/>
-        <references refid="global_8_h_1ae5fcffdfa527121d2b3f80644536edbd">cuda_prof</references>
-        <references refid="global_8_h_1ae68076dadfc8e0ee051559218f8a16aa">mfirst</references>
-        <references refid="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0">mstep</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-        <references refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" compoundref="_pot_accel_8_h" startline="74">PotAccel::play_back</references>
-        <references refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" compoundref="_pot_accel_8_h" startline="77">PotAccel::play_cnew</references>
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-        <type>void</type>
-        <definition>void Cylinder::determine_acceleration_and_potential</definition>
-        <argsstring>()</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>Cylinder::determine_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_basis_1abb4dbfbe9c234f44b1719a4d89dc3951">determine_acceleration_and_potential</reimplements>
-        <briefdescription>
-<para>All derived classes must provide a method to compute the force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="149" column="8"/>
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-      <memberdef kind="function" id="class_cylinder_1a2052d5c8fe1589f91215058ebd72ec2a" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_acceleration_and_potential</definition>
-        <argsstring>()</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>Cylinder::determine_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_basis_1abb4dbfbe9c234f44b1719a4d89dc3951">determine_acceleration_and_potential</reimplements>
-        <briefdescription>
-<para>All derived classes must provide a method to compute the force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="149" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a7833c07ea8eeb02353c696114de18fbc" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * Cylinder::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>Cylinder::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the force computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="153" column="9"/>
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-        <type>void *</type>
-        <definition>void * Cylinder::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>Cylinder::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the force computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="153" column="9"/>
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-        <type>void</type>
-        <definition>void Cylinder::determine_coefficients</definition>
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-        <name>determine_coefficients</name>
-        <qualifiedname>Cylinder::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Used by get_acceleration_and_potential to request that the expansion be performed. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="141" column="8"/>
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-      <memberdef kind="function" id="class_cylinder_1a31fffadf7f868525edeb6b561357f8bd" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_coefficients</definition>
-        <argsstring>()</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>Cylinder::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Used by get_acceleration_and_potential to request that the expansion be performed. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="141" column="8"/>
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-      <memberdef kind="function" id="class_cylinder_1a48b39d1e3e02f172018bccc4dd8ad842" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_coefficients_eof</definition>
-        <argsstring>()</argsstring>
-        <name>determine_coefficients_eof</name>
-        <qualifiedname>Cylinder::determine_coefficients_eof</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="147" column="8"/>
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-      <memberdef kind="function" id="class_cylinder_1a48b39d1e3e02f172018bccc4dd8ad842" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_coefficients_eof</definition>
-        <argsstring>()</argsstring>
-        <name>determine_coefficients_eof</name>
-        <qualifiedname>Cylinder::determine_coefficients_eof</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="147" column="8"/>
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-        <type>void</type>
-        <definition>void Cylinder::determine_coefficients_particles</definition>
-        <argsstring>()</argsstring>
-        <name>determine_coefficients_particles</name>
-        <qualifiedname>Cylinder::determine_coefficients_particles</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="145" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a9fa4938d576706cd9f654975fdc34f7e" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_coefficients_particles</definition>
-        <argsstring>()</argsstring>
-        <name>determine_coefficients_particles</name>
-        <qualifiedname>Cylinder::determine_coefficients_particles</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="145" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a84c2eeb8f441c58f78512edf8d5a3f98" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_coefficients_playback</definition>
-        <argsstring>()</argsstring>
-        <name>determine_coefficients_playback</name>
-        <qualifiedname>Cylinder::determine_coefficients_playback</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="143" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a84c2eeb8f441c58f78512edf8d5a3f98" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_coefficients_playback</definition>
-        <argsstring>()</argsstring>
-        <name>determine_coefficients_playback</name>
-        <qualifiedname>Cylinder::determine_coefficients_playback</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="143" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a2362b4060aa3fb06b5b8de448ae61f81" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * Cylinder::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
-        <qualifiedname>Cylinder::determine_coefficients_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49">determine_coefficients_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the expansion computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="151" column="9"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a2362b4060aa3fb06b5b8de448ae61f81" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * Cylinder::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
-        <qualifiedname>Cylinder::determine_coefficients_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49">determine_coefficients_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the expansion computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="151" column="9"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a0da47f0873d61edd6c7733115de9f143" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>Cylinder::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="127" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a0da47f0873d61edd6c7733115de9f143" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>Cylinder::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="127" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a4ccd3920ba81aabc5051840b7c0d5875" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_reset</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_reset</name>
-        <qualifiedname>Cylinder::multistep_reset</qualifiedname>
-        <reimplements refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f">multistep_reset</reimplements>
-        <briefdescription>
-<para>Reset used particle counter and mass registers. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="162" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a4ccd3920ba81aabc5051840b7c0d5875" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_reset</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_reset</name>
-        <qualifiedname>Cylinder::multistep_reset</qualifiedname>
-        <reimplements refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f">multistep_reset</reimplements>
-        <briefdescription>
-<para>Reset used particle counter and mass registers. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="170" column="16"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-func">
-      <memberdef kind="function" id="class_cylinder_1a07457e19eb28e7c4b204e26d31c1b267" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::getCoefs</definition>
-        <argsstring>(Eigen::MatrixXcd &amp;C)</argsstring>
-        <name>getCoefs</name>
-        <qualifiedname>Cylinder::getCoefs</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXcd &amp;</type>
-          <declname>C</declname>
-        </param>
-        <briefdescription>
-<para>Store coefficients from <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="280" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="280" bodyend="288"/>
-        <references refid="class_cylinder_1a12ec434b1c079bf422d74f09034177a2" compoundref="_cylinder_8_h" startline="131">mmax</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a07457e19eb28e7c4b204e26d31c1b267" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::getCoefs</definition>
-        <argsstring>(Eigen::MatrixXcd &amp;C)</argsstring>
-        <name>getCoefs</name>
-        <qualifiedname>Cylinder::getCoefs</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXcd &amp;</type>
-          <declname>C</declname>
-        </param>
-        <briefdescription>
-<para>Store coefficients from <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="279" column="8" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="279" bodyend="287"/>
-        <references refid="class_cylinder_1a12ec434b1c079bf422d74f09034177a2" compoundref="_cylinder_8_h" startline="131">mmax</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1ae05f092861f7abbd4addc7f158d34e52" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::occt_output</definition>
-        <argsstring>()</argsstring>
-        <name>occt_output</name>
-        <qualifiedname>Cylinder::occt_output</qualifiedname>
-        <briefdescription>
-<para>Print deep debugging data. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="258" column="8"/>
-        <referencedby refid="class_cylinder_1a77f0370f73afe1d8a759858128dc6df9" compoundref="_cylinder_8_h" startline="432" endline="438">multistep_update_finish</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a717a3d56d06af595e0ed1fe364b2525b" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::setCoefs</definition>
-        <argsstring>(Eigen::MatrixXcd &amp;C)</argsstring>
-        <name>setCoefs</name>
-        <qualifiedname>Cylinder::setCoefs</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXcd &amp;</type>
-          <declname>C</declname>
-        </param>
-        <briefdescription>
-<para>Installed stored coefficients in <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="291" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="291" bodyend="298"/>
-        <references refid="class_cylinder_1a12ec434b1c079bf422d74f09034177a2" compoundref="_cylinder_8_h" startline="131">mmax</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a717a3d56d06af595e0ed1fe364b2525b" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::setCoefs</definition>
-        <argsstring>(Eigen::MatrixXcd &amp;C)</argsstring>
-        <name>setCoefs</name>
-        <qualifiedname>Cylinder::setCoefs</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXcd &amp;</type>
-          <declname>C</declname>
-        </param>
-        <briefdescription>
-<para>Installed stored coefficients in <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="290" column="8" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="290" bodyend="297"/>
-        <references refid="class_cylinder_1a12ec434b1c079bf422d74f09034177a2" compoundref="_cylinder_8_h" startline="131">mmax</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_cylinder_1a32f6f757b5d7f130a7a3582077ff990a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Cylinder::Cylinder</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf, MixtureBasis *m=0)</argsstring>
-        <name>Cylinder</name>
-        <qualifiedname>Cylinder::Cylinder</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <param>
-          <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-          <declname>m</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (a <ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>conf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>contains the parameters passed to the method </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>m</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the <ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> for a multicenter expansion</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Parameters settable in the configuration line include: <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>acyl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the disk scale length for the basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hcyl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the disk scale height for the basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmaxfid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radial order for the underlying spherical basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lmaxfid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the harmonic order for the underlying spherical basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the azimuthal harmonic order for final cylindrical expansion </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mlim</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>restricts the azimuthal harmonic order for testing </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylnx</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radial grid in the basis function table </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylny</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the vertical grid in the basis function table </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the size of the spherical radial grid used to construct the cylindrical basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the order of the radial expansion </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylodd</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of terms with vertically antisymmetric parity out of ncylorder. If unspecified, you will get the original variance order. </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylrecomp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between basis recomputation (default: -1 which means NEVER) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between Hall coefficient recomputaton </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the first step for Hall coefficient computaton </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nvtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of step VTK output </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcadiag</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true enables PCA output diagnostics (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cachename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the file for the EOF basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>vflag</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>sets verbosity (see EmpCylSL.cc) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of <ref refid="class_legendre" kindref="compound">Legendre</ref> radial knots for numerical basis computation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of azimuthal knots for numerical basis computation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of <ref refid="class_legendre" kindref="compound">Legendre</ref> polar knots for numerical basis computation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ashift</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the shift applied in the x-axis relative to the original for basis conditioning </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>self_consistent</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to false for fixed potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>precond</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true for analytic basis function conditioning (default: true) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>logr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>tabulate basis in logarithmic coordinates (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavar</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true for real-time Hall analysis (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>samplesz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the default particle number in PCA subsampling partitions (default is 1). The value 0 sets the sample size to sqrt(N). </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true dumps PCA functions in VTK format for diagnostics (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>try_cache</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true means try to read basis from cache (default: true) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dump_basis</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true outputs basis into file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapR</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>selects the radial coordinate mapping (default: 2, power mapping) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapZ</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>selects the vertical coordinate mapping (default: 1, sinh mapping) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="352" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a32f6f757b5d7f130a7a3582077ff990a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Cylinder::Cylinder</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf, MixtureBasis *m=0)</argsstring>
-        <name>Cylinder</name>
-        <qualifiedname>Cylinder::Cylinder</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <param>
-          <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-          <declname>m</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (a <ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>conf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>contains the parameters passed to the method </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>m</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the <ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> for a multicenter expansion</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Parameters settable in the configuration line include: <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>acyl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the disk scale length for the basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hcyl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the disk scale height for the basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radial order for the underlying spherical basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the harmonic order for the underlying spherical basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the azimuthal harmonic order for final cylindrical expansion </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mlim</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>restricts the azimuthal harmonic order for testing </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylnx</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radial grid in the basis function table </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylny</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the vertical grid in the basis function table </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the size of the spherical radial grid used to construct the cylindrical basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylorder</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the order of the radial expansion </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylodd</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of terms with vertically antisymmetric parity out of ncylorder. If unspecified, you will get the original variance order. </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylrecomp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between basis recomputation (default: -1 which means NEVER) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between Hall coefficient recomputaton </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the first step for Hall coefficient computaton </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nvtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of step VTK output </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcadiag</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true enables PCA output diagnostics (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cachename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is an override for the default EOF cache file name </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>vflag</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>sets verbosity (see EmpCylSL.cc) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of <ref refid="class_legendre" kindref="compound">Legendre</ref> radial knots for numerical basis computation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of azimuthal knots for numerical basis computation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of <ref refid="class_legendre" kindref="compound">Legendre</ref> polar knots for numerical basis computation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ashift</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the shift applied in the x-axis relative to the original for basis conditioning </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>self_consistent</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to false for fixed potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>expcond</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true for analytic basis function conditioning (default: true) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>logr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>tabulate basis in logarithmic coordinates (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavar</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true for real-time Hall analysis (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>samplesz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the default particle number in PCA subsampling partitions (default is 1). The value 0 sets the sample size to sqrt(N). </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true dumps PCA functions in VTK format for diagnostics (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>try_cache</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true means try to read basis from cache (default: true) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dump_basis</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true outputs basis into file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>density</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true means compute density basis in addition to potential (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapR</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>selects the radial coordinate mapping (default: 2, power mapping) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapZ</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>selects the vertical coordinate mapping (default: 1, sinh mapping) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="352" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a4cffcad313069e21b01a648d656f2296" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_fields_at_point</definition>
-        <argsstring>(double x, double y, double z, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotx, double *tpoty, double *tpotz)</argsstring>
-        <name>determine_fields_at_point</name>
-        <qualifiedname>Cylinder::determine_fields_at_point</qualifiedname>
-        <reimplements refid="class_basis_1a8d4bece8ddfe81223177e63d76779284">determine_fields_at_point</reimplements>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotx</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpoty</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in Cartesian coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="406" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a4cffcad313069e21b01a648d656f2296" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_fields_at_point</definition>
-        <argsstring>(double x, double y, double z, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotx, double *tpoty, double *tpotz)</argsstring>
-        <name>determine_fields_at_point</name>
-        <qualifiedname>Cylinder::determine_fields_at_point</qualifiedname>
-        <reimplements refid="class_basis_1a8d4bece8ddfe81223177e63d76779284">determine_fields_at_point</reimplements>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotx</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpoty</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in Cartesian coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="406" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_fields_at_point_cyl</definition>
-        <argsstring>(double r, double z, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpotz, double *tpotp)</argsstring>
-        <name>determine_fields_at_point_cyl</name>
-        <qualifiedname>Cylinder::determine_fields_at_point_cyl</qualifiedname>
-        <reimplements refid="class_basis_1a3bcc5e3250f82d0ce476b096eabf342a">determine_fields_at_point_cyl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in cylindrical coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="370" column="3"/>
-        <referencedby refid="class_cylinder_1a93e53590d9d96600f1a761723130dbc0" compoundref="_cylinder_8_h" startline="378" endline="402">determine_fields_at_point_cyl</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_fields_at_point_cyl</definition>
-        <argsstring>(double r, double z, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpotz, double *tpotp)</argsstring>
-        <name>determine_fields_at_point_cyl</name>
-        <qualifiedname>Cylinder::determine_fields_at_point_cyl</qualifiedname>
-        <reimplements refid="class_basis_1a3bcc5e3250f82d0ce476b096eabf342a">determine_fields_at_point_cyl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in cylindrical coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="370" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a93e53590d9d96600f1a761723130dbc0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_fields_at_point_cyl</definition>
-        <argsstring>(double r, double z, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpotz, double *tpotp, int mmin, int mlim)</argsstring>
-        <name>determine_fields_at_point_cyl</name>
-        <qualifiedname>Cylinder::determine_fields_at_point_cyl</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mmin</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mlim</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in cylindrical coordinates with limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="378" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="378" bodyend="402"/>
-        <references refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1">determine_fields_at_point_cyl</references>
-        <references refid="class_cylinder_1a9234ee393feef01aad1ca212f09cd79d" compoundref="_cylinder_8_h" startline="131">mlim</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a93e53590d9d96600f1a761723130dbc0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_fields_at_point_cyl</definition>
-        <argsstring>(double r, double z, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpotz, double *tpotp, int mmin, int mlim)</argsstring>
-        <name>determine_fields_at_point_cyl</name>
-        <qualifiedname>Cylinder::determine_fields_at_point_cyl</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mmin</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mlim</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in cylindrical coordinates with limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="378" column="3" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="378" bodyend="402"/>
-        <references refid="class_cylinder_1a48d17ba2d4a5597c76e32050e40f54d1">determine_fields_at_point_cyl</references>
-        <references refid="class_cylinder_1a9234ee393feef01aad1ca212f09cd79d" compoundref="_cylinder_8_h" startline="131">mlim</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a021dbbef8f761e75fef8f25316bb71c8" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_fields_at_point_sph</definition>
-        <argsstring>(double r, double theta, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpott, double *tpotp)</argsstring>
-        <name>determine_fields_at_point_sph</name>
-        <qualifiedname>Cylinder::determine_fields_at_point_sph</qualifiedname>
-        <reimplements refid="class_basis_1a34f7d4340bcd0c5452f430cebf5c3665">determine_fields_at_point_sph</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>theta</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpott</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in spherical polar coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="362" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a021dbbef8f761e75fef8f25316bb71c8" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::determine_fields_at_point_sph</definition>
-        <argsstring>(double r, double theta, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpott, double *tpotp)</argsstring>
-        <name>determine_fields_at_point_sph</name>
-        <qualifiedname>Cylinder::determine_fields_at_point_sph</qualifiedname>
-        <reimplements refid="class_basis_1a34f7d4340bcd0c5452f430cebf5c3665">determine_fields_at_point_sph</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>theta</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpott</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in spherical polar coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="362" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a15c516b5506bd769ee4cca1f5c838e2a" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::dump_coefs</definition>
-        <argsstring>(ostream &amp;out)</argsstring>
-        <name>dump_coefs</name>
-        <qualifiedname>Cylinder::dump_coefs</qualifiedname>
-        <reimplements refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf">dump_coefs</reimplements>
-        <param>
-          <type>ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-<para>Save coefficients to file (need type marker to id dump, component id?) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="458" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a15c516b5506bd769ee4cca1f5c838e2a" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::dump_coefs</definition>
-        <argsstring>(ostream &amp;out)</argsstring>
-        <name>dump_coefs</name>
-        <qualifiedname>Cylinder::dump_coefs</qualifiedname>
-        <reimplements refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf">dump_coefs</reimplements>
-        <param>
-          <type>ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-<para>Save coefficients to file (need type marker to id dump, component id?) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="432" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a0e2194b76e3515007c157ddf7f1dbe72" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::dump_coefs_h5</definition>
-        <argsstring>(const std::string &amp;file)</argsstring>
-        <name>dump_coefs_h5</name>
-        <qualifiedname>Cylinder::dump_coefs_h5</qualifiedname>
-        <reimplements refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c">dump_coefs_h5</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-<para>Save coefficients to named HDF5 file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="461" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a0e2194b76e3515007c157ddf7f1dbe72" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::dump_coefs_h5</definition>
-        <argsstring>(const std::string &amp;file)</argsstring>
-        <name>dump_coefs_h5</name>
-        <qualifiedname>Cylinder::dump_coefs_h5</qualifiedname>
-        <reimplements refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c">dump_coefs_h5</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-<para>Save coefficients to named HDF5 file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="435" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1af4c04de3b6630da024459d91ede1e2d1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::dump_mzero</definition>
-        <argsstring>(const string &amp;name, int step)</argsstring>
-        <name>dump_mzero</name>
-        <qualifiedname>Cylinder::dump_mzero</qualifiedname>
-        <param>
-          <type>const string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>step</declname>
-        </param>
-        <briefdescription>
-<para>Sanity check on grid: dumps SM-style images of initial field. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="464" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1af4c04de3b6630da024459d91ede1e2d1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Cylinder::dump_mzero</definition>
-        <argsstring>(const string &amp;name, int step)</argsstring>
-        <name>dump_mzero</name>
-        <qualifiedname>Cylinder::dump_mzero</qualifiedname>
-        <param>
-          <type>const string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>step</declname>
-        </param>
-        <briefdescription>
-<para>Sanity check on grid: dumps SM-style images of initial field. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="438" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a7eedc780551196e17ce0949acf5c951c" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::get_acceleration_and_potential</definition>
-        <argsstring>(Component *)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>Cylinder::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        </param>
-        <briefdescription>
-<para>The main force call. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="358" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a7eedc780551196e17ce0949acf5c951c" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Cylinder::get_acceleration_and_potential</definition>
-        <argsstring>(Component *)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>Cylinder::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        </param>
-        <briefdescription>
-<para>The main force call. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="358" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a57315dc95a1b474e33109007f654c20e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_add_debug</definition>
-        <argsstring>(const std::vector&lt; std::vector&lt; std::pair&lt; unsigned, unsigned &gt; &gt; &gt; &amp;data)</argsstring>
-        <name>multistep_add_debug</name>
-        <qualifiedname>Cylinder::multistep_add_debug</qualifiedname>
-        <param>
-          <type>const std::vector&lt; std::vector&lt; std::pair&lt; unsigned, unsigned &gt; &gt; &gt; &amp;</type>
-          <declname>data</declname>
-        </param>
-        <briefdescription>
-<para>Multistep accumulate debugging info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="442" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="443" bodyend="452"/>
-        <references refid="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" compoundref="_cylinder_8_h" startline="255">occt</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1ad8f35bcf5fa4a3b686c63b23a1b497b4" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_debug</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_debug</name>
-        <qualifiedname>Cylinder::multistep_debug</qualifiedname>
-        <reimplements refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121">multistep_debug</reimplements>
-        <briefdescription>
-<para>Print debug info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="455" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1ad8f35bcf5fa4a3b686c63b23a1b497b4" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_debug</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_debug</name>
-        <qualifiedname>Cylinder::multistep_debug</qualifiedname>
-        <reimplements refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121">multistep_debug</reimplements>
-        <briefdescription>
-<para>Print debug info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="429" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1afbf22ebc466872639f53e2dcd4847975" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_update</definition>
-        <argsstring>(int cur, int next, Component *c, int i, int id)</argsstring>
-        <name>multistep_update</name>
-        <qualifiedname>Cylinder::multistep_update</qualifiedname>
-        <reimplements refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a">multistep_update</reimplements>
-        <param>
-          <type>int</type>
-          <declname>cur</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>next</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-<para>Implementation of level shifts. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="431" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1afbf22ebc466872639f53e2dcd4847975" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_update</definition>
-        <argsstring>(int cur, int next, Component *c, int i, int id)</argsstring>
-        <name>multistep_update</name>
-        <qualifiedname>Cylinder::multistep_update</qualifiedname>
-        <reimplements refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a">multistep_update</reimplements>
-        <param>
-          <type>int</type>
-          <declname>cur</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>next</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-<para>Implementation of level shifts. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="421" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_update_begin</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_begin</name>
-        <qualifiedname>Cylinder::multistep_update_begin</qualifiedname>
-        <reimplements refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381">multistep_update_begin</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step coefficient table when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput>. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="417" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="417" bodyend="430"/>
-        <references refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" compoundref="_pot_accel_8_h" startline="56">PotAccel::component</references>
-        <references refid="global_8_h_1ace19188521d679179f62686801a17451">mdrft</references>
-        <references refid="class_component_1a1259cf1d6c00ec47422860f945a11284" compoundref="_component_8_h" startline="965" endline="965">Component::NoSwitch</references>
-        <references refid="class_cylinder_1a9e99f36b08c657530c89e07423ad0cbe" compoundref="_cylinder_8_h" startline="255">occt</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-        <references refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" compoundref="_pot_accel_8_h" startline="74">PotAccel::play_back</references>
-        <references refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" compoundref="_pot_accel_8_h" startline="77">PotAccel::play_cnew</references>
-        <references refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" compoundref="_cylinder_8_h" startline="136">self_consistent</references>
-        <references refid="global_8_h_1a75043af440748a82fcf73bb6948b476e">this_step</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_update_begin</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_begin</name>
-        <qualifiedname>Cylinder::multistep_update_begin</qualifiedname>
-        <reimplements refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381">multistep_update_begin</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step coefficient table when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput>. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="417" column="16" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="417" bodyend="420"/>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-        <references refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" compoundref="_pot_accel_8_h" startline="74">PotAccel::play_back</references>
-        <references refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" compoundref="_pot_accel_8_h" startline="77">PotAccel::play_cnew</references>
-        <references refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" compoundref="_cylinder_8_h" startline="136">self_consistent</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a77f0370f73afe1d8a759858128dc6df9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_update_finish</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_finish</name>
-        <qualifiedname>Cylinder::multistep_update_finish</qualifiedname>
-        <reimplements refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e">multistep_update_finish</reimplements>
-        <briefdescription>
-<para>Execute to finish level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="432" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Cylinder.H" bodystart="432" bodyend="438"/>
-        <references refid="class_cylinder_1ae05f092861f7abbd4addc7f158d34e52">occt_output</references>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-        <references refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" compoundref="_pot_accel_8_h" startline="74">PotAccel::play_back</references>
-        <references refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" compoundref="_pot_accel_8_h" startline="77">PotAccel::play_cnew</references>
-        <references refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" compoundref="_cylinder_8_h" startline="136">self_consistent</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a77f0370f73afe1d8a759858128dc6df9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void Cylinder::multistep_update_finish</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_finish</name>
-        <qualifiedname>Cylinder::multistep_update_finish</qualifiedname>
-        <reimplements refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e">multistep_update_finish</reimplements>
-        <briefdescription>
-<para>Execute to finish level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="422" column="16" bodyfile="/home/weinberg/Projects/EXP/src/CylTwoD.H" bodystart="422" bodyend="425"/>
-        <references refid="class_cylinder_1a3c5d15b8fad2908a261391dafafdc937" compoundref="_cylinder_8_h" startline="118">ortho</references>
-        <references refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" compoundref="_pot_accel_8_h" startline="74">PotAccel::play_back</references>
-        <references refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" compoundref="_pot_accel_8_h" startline="77">PotAccel::play_cnew</references>
-        <references refid="class_cylinder_1a565762a9935614e789d776b6dad1560c" compoundref="_cylinder_8_h" startline="136">self_consistent</references>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a62b974fc969958cc05fa7d72cb5a4395" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual Cylinder::~Cylinder</definition>
-        <argsstring>()</argsstring>
-        <name>~Cylinder</name>
-        <qualifiedname>Cylinder::~Cylinder</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Cylinder.H" line="355" column="11"/>
-      </memberdef>
-      <memberdef kind="function" id="class_cylinder_1a62b974fc969958cc05fa7d72cb5a4395" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual Cylinder::~Cylinder</definition>
-        <argsstring>()</argsstring>
-        <name>~Cylinder</name>
-        <qualifiedname>Cylinder::~Cylinder</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/CylTwoD.H" line="355" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>This routine computes the potential, acceleration and density using the Cylindrical biorthogonal expansion</para>
-<para>Configuration parameters:</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>rcylmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum cylindrical grid radius in scale-length units</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rcylmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum cylindrical grid radius in scale-length units</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>acyl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale length</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hcyl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale height</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum spherical harmonic index for EOF construction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum azimuthal order for the resulting basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mlim</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>applies a limit &lt;= mmax without basis reconstruction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylnx</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the grid size for the cylindrical radius axis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylny</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the grid size for the vertical axis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>radial grid size for basis computation (NUMR in <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylorder</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum order in for each harmonic m for the new basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylodd</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of vertically antisymmetric basis functions out of the total ncylorder</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylrecomp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the frequency of basis recompution during a running simulation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number steps between PCA variance/error analyses</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number steps to skip before the first PCA variance/error analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nvtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number steps between vtk visualization output for the PCA variance/error analyses</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cachename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the basis cache file</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>samplesz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the default particle number in PCA subsampling partitions (default is 1). The value 0 sets the sample size to sqrt(N).</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>if the size of the radial quadrature grid for analytic EOF computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>if the size of the azimuthal quadrature grid for analytic EOF computation (set to 1 if model is axisymmetric)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the size of the equitorial quadrature grid for analytic EOF computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ashift</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>offsets the center of the analytic model for basis function computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>precond</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean true turns on analytic basis function preconditioning (default: true)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>logr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean turns on logarithmic radial basis gridding in <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref></para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavar</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>turns on variance analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcaeof</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>turns on basis conditioning based on variance analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcadiag</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>logs diagnostic output for variance analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>turns on VTK visualization diagnostic output for variance analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hexp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the Hall sharpness parameter</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>snr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the signal-to-noise prefactor for sharpness computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>evcut</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the cumulative trim remainder on the covariance eigenvalues (default: -1, which implies no trimming). Set to small positive value for trimming.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>try_cache</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>false suppresses cache reading on restart (default: true)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EVEN_M</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true uses even harmonic orders only</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmap</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the coordinate mapping type (deprecated but kept for backward consistency)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radial coordinate mapping type</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the vertical coordinate mapping type</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>self_consistent</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to false turns off potential expansion; only performed the first time</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>playback</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>file reads a coefficient file and uses it to compute the basis function output for resimiulation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>python</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the file name of Python module which supplies the &apos;disk_density&apos; function for conditioning the cylindrical basis. A non-null string triggers the use of the Python interpreter to evaluate the target density function.</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-This routine computes the potential, acceleration and density using the Cylindrical biorthogonal expansion</para>
-<para>Configuration parameters:</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>rcylmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum cylindrical grid radius in scale-length units</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rcylmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum cylindrical grid radius in scale-length units</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>acyl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale length</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hcyl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale height</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum spherical harmonic index for EOF construction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum azimuthal order for the resulting basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mlim</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>applies a limit &lt;= mmax without basis reconstruction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylnx</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the grid size for the cylindrical radius axis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylny</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the grid size for the vertical axis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>radial grid size for basis computation (NUMR in <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref>)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylorder</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum order in for each harmonic m for the new basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylodd</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of vertically antisymmetric basis functions out of the total ncylorder</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ncylrecomp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the frequency of basis recompution during a running simulation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number steps between PCA variance/error analyses</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>npca0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number steps to skip before the first PCA variance/error analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nvtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number steps between vtk visualization output for the PCA variance/error analyses</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cachename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the basis cache file</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>override</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean ignores the specificed cache file name and performes a recomputation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>samplesz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the default particle number in PCA subsampling partitions (default is 1). The value 0 sets the sample size to sqrt(N).</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>if the size of the radial quadrature grid for analytic EOF computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>if the size of the azimuthal quadrature grid for analytic EOF computation (set to 1 if model is axisymmetric)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tnum</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the size of the equitorial quadrature grid for analytic EOF computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ashift</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>offsets the center of the analytic model for basis function computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>expcond</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean true turns on basis function reconditioning</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>logr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>boolean turns on logarithmic radial basis gridding in <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref></para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavar</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>turns on variance analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcaeof</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>turns on basis conditioning based on variance analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcadiag</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>logs diagnostic output for variance analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pcavtk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>turns on VTK visualization diagnostic output for variance analysis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hexp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the Hall sharpness parameter</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>snr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the signal-to-noise prefactor for sharpness computation</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>evcut</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the cumulative trim remainder on the covariance eigenvalues (default: -1, which implies no trimming). Set to small positive value for trimming.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>try_cache</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>false suppresses cache reading on restart (default: true)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>density</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>builds grid with density fields (e.g. for post processing)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EVEN_M</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true uses even harmonic orders only</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmap</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the coordinate mapping type (deprecated but kept for backward consistency)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radial coordinate mapping type</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the vertical coordinate mapping type</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>self_consistent</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to false turns off potential expansion; only performed the first time</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>playback</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>file reads a coefficient file and uses it to compute the basis function output for resimiulation </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Cylinder</label>
-        <link refid="class_cylinder"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Cylinder</label>
-        <link refid="class_cylinder"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="9" relation="usage">
-          <edgelabel>mix</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="9">
-        <label>MixtureBasis</label>
-        <link refid="class_mixture_basis"/>
-        <childnode refid="10" relation="usage">
-          <edgelabel>p</edgelabel>
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
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-      <node id="10">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-        <childnode refid="2" relation="usage">
-          <edgelabel>exp_in</edgelabel>
-          <edgelabel>exp_out</edgelabel>
-        </childnode>
-        <childnode refid="9" relation="usage">
-          <edgelabel>mix_in</edgelabel>
-          <edgelabel>mix_out</edgelabel>
-        </childnode>
-      </node>
-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
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-      <member refid="class_cylinder_1ace6e78eca47b4eeb70c39cbb5faa7382" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>acyl</name></member>
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-      <member refid="class_cylinder_1aea8a8e1986913f71961bf3164e5f59ba" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>cachename</name></member>
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-      <member refid="class_cylinder_1ae87c4698e638dc93937b5a8d327088d2" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>cmapR</name></member>
-      <member refid="class_cylinder_1ac31d5bc4433a9f3a3f44a8dd1a242d28" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>cmapZ</name></member>
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-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>Cylinder</scope><name>component</name></member>
-      <member refid="class_cylinder_1a408307e5a429e0ba50cbd0b1aa55bd7f" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>compute</name></member>
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-      <member refid="class_cylinder_1a301c653a9d52036222cc9e80d75ef5df" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>compute_grid_mass</name></member>
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-      <member refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>compute_multistep_coefficients</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>Cylinder</scope><name>conf</name></member>
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-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>Cylinder</scope><name>cudaAware</name></member>
-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>Cylinder</scope><name>current_keys</name></member>
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-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>Cylinder</scope><name>cylinder</name></member>
-      <member refid="class_cylinder_1a32f6f757b5d7f130a7a3582077ff990a" prot="public" virt="non-virtual"><scope>Cylinder</scope><name>Cylinder</name></member>
-      <member refid="class_cylinder_1a32f6f757b5d7f130a7a3582077ff990a" prot="public" virt="non-virtual"><scope>Cylinder</scope><name>Cylinder</name></member>
-      <member refid="class_cylinder_1a8c4a5ae2696883060a6f5880c207c6d3" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>cylmass</name></member>
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-      <member refid="class_cylinder_1aaf9d897ba34c9679899680e239793d57" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>density</name></member>
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-      <member refid="class_cylinder_1a2052d5c8fe1589f91215058ebd72ec2a" prot="private" virt="virtual"><scope>Cylinder</scope><name>determine_acceleration_and_potential</name></member>
-      <member refid="class_cylinder_1a7833c07ea8eeb02353c696114de18fbc" prot="private" virt="virtual"><scope>Cylinder</scope><name>determine_acceleration_and_potential_thread</name></member>
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-      <member refid="class_cylinder_1a31fffadf7f868525edeb6b561357f8bd" prot="private" virt="virtual"><scope>Cylinder</scope><name>determine_coefficients</name></member>
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-      <member refid="class_cylinder_1a8e8b71b9cd08c7696dc4b89a2b6f59fa" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>expcond</name></member>
-      <member refid="class_cylinder_1a7a8b54489da5644c1270b6d37ba21c0d" prot="private" virt="non-virtual"><scope>Cylinder</scope><name>firstime</name></member>
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diff --git a/doxyxml/class_data_grid.xml b/doxyxml/class_data_grid.xml
deleted file mode 100644
index 412fb78..0000000
--- a/doxyxml/class_data_grid.xml
+++ /dev/null
@@ -1,189 +0,0 @@
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-          <declname>nz</declname>
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-        <param>
-          <type>double</type>
-          <declname>xmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>xmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ymin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ymax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zmax</declname>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>type</declname>
-          <defval>&quot;VTK&quot;</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DataGrid.H" line="29" column="3" bodyfile="/home/weinberg/Projects/EXP/include/DataGrid.H" bodystart="29" bodyend="48"/>
-        <references refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" compoundref="_three_d_grid_8_h" startline="21">ThreeDGrid::nx</references>
-        <references refid="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" compoundref="_three_d_grid_8_h" startline="21">ThreeDGrid::ny</references>
-        <references refid="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" compoundref="_three_d_grid_8_h" startline="21">ThreeDGrid::nz</references>
-        <references refid="class_data_grid_1afda58ed7335a9f68e4de0a754057d55e" compoundref="_data_grid_8_h" startline="24">ptr</references>
-        <references refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" compoundref="_three_d_grid_8_h" startline="22">ThreeDGrid::xmax</references>
-        <references refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" compoundref="_three_d_grid_8_h" startline="22">ThreeDGrid::xmin</references>
-        <references refid="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" compoundref="_three_d_grid_8_h" startline="22">ThreeDGrid::ymax</references>
-        <references refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" compoundref="_three_d_grid_8_h" startline="22">ThreeDGrid::ymin</references>
-        <references refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" compoundref="_three_d_grid_8_h" startline="22">ThreeDGrid::zmax</references>
-        <references refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" compoundref="_three_d_grid_8_h" startline="22">ThreeDGrid::zmin</references>
-      </memberdef>
-      <memberdef kind="function" id="class_data_grid_1a30fa6af1d044ec8eb11d719a8b2c1a79" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>void DataGrid::Write</definition>
-        <argsstring>(const std::string &amp;name)</argsstring>
-        <name>Write</name>
-        <qualifiedname>DataGrid::Write</qualifiedname>
-        <reimplements refid="class_three_d_grid_1a52f6cbab42f66577b8d5abd46e1de265">Write</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Write output file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DataGrid.H" line="57" column="8" bodyfile="/home/weinberg/Projects/EXP/include/DataGrid.H" bodystart="57" bodyend="60"/>
-        <references refid="class_data_grid_1afda58ed7335a9f68e4de0a754057d55e" compoundref="_data_grid_8_h" startline="24">ptr</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>This implementation of <ref refid="class_three_d_grid" kindref="compound">ThreeDGrid</ref> instantiates at <ref refid="class_vtk_grid" kindref="compound">VtkGrid</ref> if VTK is available and <ref refid="class_table_grid" kindref="compound">TableGrid</ref> if not.</para>
-<para>This is really syntactic glue that allows one call without checking for VTK in application codes. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>DataGrid</label>
-        <link refid="class_data_grid"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>ThreeDGrid</label>
-        <link refid="class_three_d_grid"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>DataGrid</label>
-        <link refid="class_data_grid"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>ThreeDGrid</label>
-        <link refid="class_three_d_grid"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/DataGrid.H" line="20" column="1" bodyfile="/home/weinberg/Projects/EXP/include/DataGrid.H" bodystart="21" bodyend="61"/>
-    <listofallmembers>
-      <member refid="class_data_grid_1a01496cbad06db14c9214a675df1997e8" prot="public" virt="virtual"><scope>DataGrid</scope><name>Add</name></member>
-      <member refid="class_data_grid_1ab07533b097a221024850ae1b669df297" prot="public" virt="non-virtual"><scope>DataGrid</scope><name>DataGrid</name></member>
-      <member refid="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>nx</name></member>
-      <member refid="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>ny</name></member>
-      <member refid="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>nz</name></member>
-      <member refid="class_data_grid_1afda58ed7335a9f68e4de0a754057d55e" prot="private" virt="non-virtual"><scope>DataGrid</scope><name>ptr</name></member>
-      <member refid="class_three_d_grid_1a602e5d83286c984b71154d538efa97d5" prot="public" virt="non-virtual"><scope>DataGrid</scope><name>ThreeDGrid</name></member>
-      <member refid="class_three_d_grid_1aa50af21f0edbc4004e349ff140335452" prot="public" virt="non-virtual"><scope>DataGrid</scope><name>ThreeDGrid</name></member>
-      <member refid="class_data_grid_1a30fa6af1d044ec8eb11d719a8b2c1a79" prot="public" virt="virtual"><scope>DataGrid</scope><name>Write</name></member>
-      <member refid="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>xmax</name></member>
-      <member refid="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>xmin</name></member>
-      <member refid="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>ymax</name></member>
-      <member refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>ymin</name></member>
-      <member refid="class_three_d_grid_1a3b0b0a6875cb1885f3db40f858f3cd72" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>zmax</name></member>
-      <member refid="class_three_d_grid_1a7321b40406cdf7138a669840745c6597" prot="protected" virt="non-virtual"><scope>DataGrid</scope><name>zmin</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_direct.xml b/doxyxml/class_direct.xml
deleted file mode 100644
index 990cad8..0000000
--- a/doxyxml/class_direct.xml
+++ /dev/null
@@ -1,806 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_direct" kind="class" language="C++" prot="public">
-    <compoundname>Direct</compoundname>
-    <basecompoundref refid="class_pot_accel" prot="public" virt="non-virtual">PotAccel</basecompoundref>
-    <includes refid="_direct_8_h" local="no">Direct.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_direct_1af93f2cab71a84e1cf1764a5c0a05f0c9" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Direct::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>Direct::a</qualifiedname>
-        <briefdescription>
-<para>MN disk scale length. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="69" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="69" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1acd5f90bc86acf9a08a57fe174c796974" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Direct::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>Direct::b</qualifiedname>
-        <briefdescription>
-<para>MN disk scale height. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="72" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="72" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a10d5f9ea3453522713dd69818c85c944" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double * Direct::bod_buffer</definition>
-        <argsstring></argsstring>
-        <name>bod_buffer</name>
-        <qualifiedname>Direct::bod_buffer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="60" column="21" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="60" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1ab291274dc2da9fab94bfa1748283f55d" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Direct::diverge</definition>
-        <argsstring></argsstring>
-        <name>diverge</name>
-        <qualifiedname>Direct::diverge</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="78" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="78" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a8ed152ae31a672f3b44541f716c0c5ed" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Direct::diverge_rfac</definition>
-        <argsstring></argsstring>
-        <name>diverge_rfac</name>
-        <qualifiedname>Direct::diverge_rfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="77" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="77" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a6ecb63d21af159c02684679c9493c098" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Direct::fixed_soft</definition>
-        <argsstring></argsstring>
-        <name>fixed_soft</name>
-        <qualifiedname>Direct::fixed_soft</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="63" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="63" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a3ec976395b951e2541c00a42b5f689db" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Direct::from_proc</definition>
-        <argsstring></argsstring>
-        <name>from_proc</name>
-        <qualifiedname>Direct::from_proc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="55" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a87ae9c2eefda4bee72bc45cc8a7b95e3" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_soft_kernel" kindref="compound">SoftKernel</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;SoftKernel&gt; Direct::kernel</definition>
-        <argsstring></argsstring>
-        <name>kernel</name>
-        <qualifiedname>Direct::kernel</qualifiedname>
-        <briefdescription>
-<para>Smoothing kernel isntance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="91" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="91" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a2819990273f290c5f39aa8ee0a099ce9" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Direct::max_bodies</definition>
-        <argsstring></argsstring>
-        <name>max_bodies</name>
-        <qualifiedname>Direct::max_bodies</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="56" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="56" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a4363c7f26c6b563cdd6fa253dfb5a3a0" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Direct::mn_model</definition>
-        <argsstring></argsstring>
-        <name>mn_model</name>
-        <qualifiedname>Direct::mn_model</qualifiedname>
-        <briefdescription>
-<para>Use Miyamoto-Nagai disk. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="66" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="66" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a8f2011822a3177a42dc82b9969a909e7" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Direct::ndim</definition>
-        <argsstring></argsstring>
-        <name>ndim</name>
-        <qualifiedname>Direct::ndim</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="58" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="58" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1aa9b35c8bcd147a39da190398045e51d1" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Direct::ninteract</definition>
-        <argsstring></argsstring>
-        <name>ninteract</name>
-        <qualifiedname>Direct::ninteract</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="57" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="57" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1afffce86b982dd12f073e3cfbd0ac07d2" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Direct::pm_model</definition>
-        <argsstring></argsstring>
-        <name>pm_model</name>
-        <qualifiedname>Direct::pm_model</qualifiedname>
-        <briefdescription>
-<para>Use point-mass profile. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="75" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="75" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1a014479dc1bae51be8505a771daa69f10" prot="private" static="no" mutable="no">
-        <type><ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref> *</type>
-        <definition>SphericalModelTable* Direct::pmmodel</definition>
-        <argsstring></argsstring>
-        <name>pmmodel</name>
-        <qualifiedname>Direct::pmmodel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="80" column="23" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="80" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1af7344418eb8c39a17e4d8bb0dfffdb90" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string Direct::pmmodel_file</definition>
-        <argsstring></argsstring>
-        <name>pmmodel_file</name>
-        <qualifiedname>Direct::pmmodel_file</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="79" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="79" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1abbfaca62819cf3ec86f37bf41e2490a1" prot="private" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double Direct::rtol</definition>
-        <argsstring></argsstring>
-        <name>rtol</name>
-        <qualifiedname>Direct::rtol</qualifiedname>
-        <initializer>= 1.0e-16</initializer>
-        <briefdescription>
-<para>Separations smaller than this are assumed to be zero (same particle) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="94" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="94" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1ab128967994a74d2f79a8a2af20d17f54" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Direct::soft</definition>
-        <argsstring></argsstring>
-        <name>soft</name>
-        <qualifiedname>Direct::soft</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="62" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="62" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1ac845615fa9e9a9835fae63a8a60b8cec" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Direct::soft_indx</definition>
-        <argsstring></argsstring>
-        <name>soft_indx</name>
-        <qualifiedname>Direct::soft_indx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="53" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="53" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1ae559f2b2f01ffd98b822ef64c551f79c" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double* Direct::tmp_buffer</definition>
-        <argsstring></argsstring>
-        <name>tmp_buffer</name>
-        <qualifiedname>Direct::tmp_buffer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="60" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Direct.H" bodystart="60" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_direct_1ab55058b741f96b988446f8990759640b" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Direct::to_proc</definition>
-        <argsstring></argsstring>
-        <name>to_proc</name>
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-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>Direct::valid_keys</qualifiedname>
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-<para>Valid keys for YAML configurations. </para>
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-        </detaileddescription>
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-        </inbodydescription>
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-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
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-          <type>void</type>
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-        </detaileddescription>
-        <inbodydescription>
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-        <definition>void * Direct::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>Direct::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the force computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <type>void</type>
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-        <name>determine_coefficients</name>
-        <qualifiedname>Direct::determine_coefficients</qualifiedname>
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-        <param>
-          <type>void</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Used by get_acceleration_and_potential to request that the expansion be performed. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void *</type>
-        <definition>void * Direct::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
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-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
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-        <briefdescription>
-<para>Multithreading implementation of the expansion computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
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-        <name>initialize</name>
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-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <type></type>
-        <definition>Direct::Direct</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf)</argsstring>
-        <name>Direct</name>
-        <qualifiedname>Direct::Direct</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
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-        <briefdescription>
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-<para>The constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (a <ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>conf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>passes in any explicit parameters </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void Direct::get_acceleration_and_potential</definition>
-        <argsstring>(Component *)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>Direct::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        </param>
-        <briefdescription>
-<para>The main force call. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Direct.H" line="110" column="8"/>
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-        <type></type>
-        <definition>virtual Direct::~Direct</definition>
-        <argsstring>()</argsstring>
-        <name>~Direct</name>
-        <qualifiedname>Direct::~Direct</qualifiedname>
-        <briefdescription>
-<para>The constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-<para>Computes the potential, acceleration and density using the direct summation</para>
-<para>Positions are passed from node to node on a ring. Accelerations computed on requested particles array due to particles in component associated with the <ref refid="class_direct" kindref="compound">Direct</ref> force. <linebreak/>
-</para>
-<para>Settable parameters: <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>soft_indx</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the index in the particle double array for the softening value.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>soft</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is a fixed softening value for all particles. This can be used even if a value is specified in the particle attribute array.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mn_model</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>uses a Miyamoto-Nagi model for the distributed gravity. E.g. a disk model particle. Default: false.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>a</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale length of the Miyamoto-Nagai model for the distributed gravity. Default: 0.01</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>b</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale height of the Miyamoto-Nagai model for the distributed gravity. Default: 0.002</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pm_model</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>uses a spherical model for the distributed gravity. E.g. a substructure halo profile. Default: false.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>pmmodel_file</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the file containing the substructure halo profile (default: SLGridSph.model)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>type</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the softening type. Current types: <ref refid="class_plummer" kindref="compound">Plummer</ref> or Spline. Default type is Spline. </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
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-        <childnode refid="5" relation="usage">
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-        <link refid="class_mass_model"/>
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diff --git a/doxyxml/class_disk2d.xml b/doxyxml/class_disk2d.xml
deleted file mode 100644
index 69bcd27..0000000
--- a/doxyxml/class_disk2d.xml
+++ /dev/null
@@ -1,1055 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk2d" kind="class" language="C++" prot="public">
-    <compoundname>Disk2d</compoundname>
-    <includes refid="_disk2d_8_h" local="no">Disk2d.H</includes>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_disk2d_1a3f3115795ca60bfb3407e956b39b9f3f" prot="private" static="yes" mutable="no">
-        <type>std::set&lt; std::string &gt;</type>
-        <definition>std::set&lt;std::string&gt; Disk2d::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>Disk2d::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid key set for parameter name checking. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="89" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="89" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_disk2d_1afae3f8327240c245c16c6f1f13bd0d64" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Disk2d::accum_setup</definition>
-        <argsstring></argsstring>
-        <name>accum_setup</name>
-        <qualifiedname>Disk2d::accum_setup</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="132" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="132" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a5f48168e084ba90ab34d04ec8739d2c2" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2d::acyltbl</definition>
-        <argsstring></argsstring>
-        <name>acyltbl</name>
-        <qualifiedname>Disk2d::acyltbl</qualifiedname>
-        <briefdescription>
-<para>Parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="119" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="119" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a1136d383ae80114753df01fe3d4d23c7" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string Disk2d::biorth</definition>
-        <argsstring></argsstring>
-        <name>biorth</name>
-        <qualifiedname>Disk2d::biorth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="125" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="125" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a38da7932c9af589c04098894d8a61e21" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Disk2d::coefs_made</definition>
-        <argsstring></argsstring>
-        <name>coefs_made</name>
-        <qualifiedname>Disk2d::coefs_made</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="132" column="22" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="132" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1ad8d664fee5f533ca072b01447f29912f" prot="private" static="no" mutable="no">
-        <type>YAML::Node</type>
-        <definition>YAML::Node Disk2d::conf</definition>
-        <argsstring></argsstring>
-        <name>conf</name>
-        <qualifiedname>Disk2d::conf</qualifiedname>
-        <briefdescription>
-<para>Config db. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="92" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="92" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1ac6fc5edb2d4538837b380556ec52fab1" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Disk2d::knots</definition>
-        <argsstring></argsstring>
-        <name>knots</name>
-        <qualifiedname>Disk2d::knots</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="123" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="123" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a6eef49d2011b29946adbeea0195365cf" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Disk2d::logr</definition>
-        <argsstring></argsstring>
-        <name>logr</name>
-        <qualifiedname>Disk2d::logr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="126" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="126" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a1aef79044d348df479c7e57606209375" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Disk2d::mmax</definition>
-        <argsstring></argsstring>
-        <name>mmax</name>
-        <qualifiedname>Disk2d::mmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="121" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="121" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a56e8d381a9324b51a3ba29529e6056c8" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string Disk2d::model</definition>
-        <argsstring></argsstring>
-        <name>model</name>
-        <qualifiedname>Disk2d::model</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="124" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="124" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a76e3d25513734b03ad6fef90bb9e9e65" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Disk2d::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>Disk2d::nmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="122" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="122" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a38da5855bfc8d38751d16631780512bc" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Disk2d::nthrds</definition>
-        <argsstring></argsstring>
-        <name>nthrds</name>
-        <qualifiedname>Disk2d::nthrds</qualifiedname>
-        <briefdescription>
-<para>Internal state variables. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="131" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="131" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a4aa8d72e39f514b9706db3cbca513771" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Disk2d::numr</definition>
-        <argsstring></argsstring>
-        <name>numr</name>
-        <qualifiedname>Disk2d::numr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="120" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="120" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a0c5ce15858c099820ce785ed3d4c5bd9" prot="private" static="no" mutable="no">
-        <type><ref refid="_disk2d_8_h_1a44ac299dfbdd6e45965acbe30c201240" kindref="member">CylPtr</ref></type>
-        <definition>CylPtr Disk2d::ortho</definition>
-        <argsstring></argsstring>
-        <name>ortho</name>
-        <qualifiedname>Disk2d::ortho</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_basis" kindref="compound">Basis</ref> instance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="95" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="95" bodyend="-1"/>
-        <referencedby refid="class_disk2d_1a6fe6eb51569ea9e92bcbbb15d3638baf" compoundref="_disk2d_8_h" startline="138" endline="139">get_pot</referencedby>
-        <referencedby refid="class_disk2d_1aff75021afb085126215aabd3221fc1d2" compoundref="_disk2d_8_h" startline="108" endline="108">getRtable</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1aa0fc03cbff8a8a12d23562d5d933569c" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2d::rcylmax</definition>
-        <argsstring></argsstring>
-        <name>rcylmax</name>
-        <qualifiedname>Disk2d::rcylmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="119" column="32" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="119" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a4cfb31d57dcf2d6a4b0f396239049fb8" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2d::rcylmin</definition>
-        <argsstring></argsstring>
-        <name>rcylmin</name>
-        <qualifiedname>Disk2d::rcylmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="119" column="24" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="119" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a2deb54317f548f10d593884253e434ae" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2d::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>Disk2d::scale</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="119" column="18" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="119" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_disk2d_1ae3d47547afc0882b2eb5b38172bf26ee" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2d::cylmass</definition>
-        <argsstring></argsstring>
-        <name>cylmass</name>
-        <qualifiedname>Disk2d::cylmass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="155" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="155" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a5cf1b818c5f118099de9fb3c17e025f7" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; Disk2d::cylmass1</definition>
-        <argsstring></argsstring>
-        <name>cylmass1</name>
-        <qualifiedname>Disk2d::cylmass1</qualifiedname>
-        <briefdescription>
-<para>Mass tally. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="154" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="154" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1acf20d580cbe31b543a663a1f1530b323" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2d::dend</definition>
-        <argsstring></argsstring>
-        <name>dend</name>
-        <qualifiedname>Disk2d::dend</qualifiedname>
-        <briefdescription>
-<para>Field evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="148" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="148" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a221d49036e16a07d2449518b0c165a92" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2d::expcoef</definition>
-        <argsstring></argsstring>
-        <name>expcoef</name>
-        <qualifiedname>Disk2d::expcoef</qualifiedname>
-        <briefdescription>
-<para>Final coefficiet set. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="151" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="151" bodyend="-1"/>
-        <referencedby refid="class_disk2d_1a76e162b8e4dd274927901880dce530de" compoundref="_disk2d_8_h" startline="192" endline="192">get_coefs</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a997786327d5859e26c38c7b18e5ffa28" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; Disk2d::expcoef0</definition>
-        <argsstring></argsstring>
-        <name>expcoef0</name>
-        <qualifiedname>Disk2d::expcoef0</qualifiedname>
-        <briefdescription>
-<para>Matrices per thread for obtaining expansion coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="142" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="142" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1ab4be2ca5aa9f62c7ba2cf2f1643bbafc" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; Disk2d::potd</definition>
-        <argsstring></argsstring>
-        <name>potd</name>
-        <qualifiedname>Disk2d::potd</qualifiedname>
-        <briefdescription>
-<para>Potential coefficient computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="145" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="145" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1ad0245fee0e0009004439d3d2e21b6855" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2d::potl</definition>
-        <argsstring></argsstring>
-        <name>potl</name>
-        <qualifiedname>Disk2d::potl</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="148" column="24" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="148" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a6c31244aaaa4f3e59196af2b480061bb" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2d::potr</definition>
-        <argsstring></argsstring>
-        <name>potr</name>
-        <qualifiedname>Disk2d::potr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="148" column="29" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="148" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_1a33c71b4b59ea0b6d3b6123f764de9a89" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2d::potz</definition>
-        <argsstring></argsstring>
-        <name>potz</name>
-        <qualifiedname>Disk2d::potz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="148" column="34" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="148" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_disk2d_1aebd6e3673258a4c0f932b016c6ea69be" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::get_dens</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>Disk2d::get_dens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="110" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a4062a255fe530a4c82ee6554adabb28d" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::get_dpotl</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dpr, Eigen::MatrixXd &amp;dpz, int tid)</argsstring>
-        <name>get_dpotl</name>
-        <qualifiedname>Disk2d::get_dpotl</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpr</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpz</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-<para>Field evaluation members. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="103" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a6ffa48102c4276bb872b5ce638f5cd8a" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::get_potl</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>Disk2d::get_potl</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="106" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a63ee411d9f3a5aa0ea0a7e56793878e5" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::get_potl_dens</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;d, int tid)</argsstring>
-        <name>get_potl_dens</name>
-        <qualifiedname>Disk2d::get_potl_dens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="112" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1aff75021afb085126215aabd3221fc1d2" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double Disk2d::getRtable</definition>
-        <argsstring>()</argsstring>
-        <name>getRtable</name>
-        <qualifiedname>Disk2d::getRtable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="108" column="18" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="108" bodyend="108"/>
-        <references refid="class_disk2d_1a0c5ce15858c099820ce785ed3d4c5bd9" compoundref="_disk2d_8_h" startline="95">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a46efa0914b5caf12d92a8a8db0c89995" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>Disk2d::initialize</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Initialize parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="98" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-func">
-      <memberdef kind="function" id="class_disk2d_1a6fe6eb51569ea9e92bcbbb15d3638baf" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;Vc, Eigen::MatrixXd &amp;Vs, double r, double z)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>Disk2d::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>Vc</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>Vs</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Use <ref refid="class_biorth_cyl" kindref="compound">BiorthCyl</ref> to evaluate the basis at r, z. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="138" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="138" bodyend="139"/>
-        <references refid="class_disk2d_1a0c5ce15858c099820ce785ed3d4c5bd9" compoundref="_disk2d_8_h" startline="95">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1acca2c24ab2d1f93f0a5024bcbf409810" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::setup_accum</definition>
-        <argsstring>()</argsstring>
-        <name>setup_accum</name>
-        <qualifiedname>Disk2d::setup_accum</qualifiedname>
-        <briefdescription>
-<para>Setup accumulation arrays. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="158" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_disk2d_1a101896358c23dec008a8b0cee32b0f1c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::accumulate</definition>
-        <argsstring>(double r, double phi, double mass)</argsstring>
-        <name>accumulate</name>
-        <qualifiedname>Disk2d::accumulate</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <briefdescription>
-<para>Add single particle to coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="178" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a21af8455280866fb7607222a66800201" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::accumulate</definition>
-        <argsstring>(std::vector&lt; Particle &gt; &amp;part)</argsstring>
-        <name>accumulate</name>
-        <qualifiedname>Disk2d::accumulate</qualifiedname>
-        <param>
-          <type>std::vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>part</declname>
-        </param>
-        <briefdescription>
-<para>Accumulate coefficients from particle distribution. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="181" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a2d034f84c0d04de26126608d63b724dc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::tuple&lt; double, double, double, double, double, double, double &gt;</type>
-        <definition>std::tuple&lt; double, double, double, double, double, double, double &gt; Disk2d::accumulated_eval</definition>
-        <argsstring>(double R, double z, double phi)</argsstring>
-        <name>accumulated_eval</name>
-        <qualifiedname>Disk2d::accumulated_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <briefdescription>
-<para>Evaluation of field. Returns: den0, den1, pot0, pot1, Fr, Fz, Fp. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="185" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a32d15a1559d17750d1ed7a939fcd7ec9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Disk2d::Disk2d</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>Disk2d</name>
-        <qualifiedname>Disk2d::Disk2d</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="163" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a76e162b8e4dd274927901880dce530de" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2d::get_coefs</definition>
-        <argsstring>()</argsstring>
-        <name>get_coefs</name>
-        <qualifiedname>Disk2d::get_coefs</qualifiedname>
-        <briefdescription>
-<para>Get coefficient matrix. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="192" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="192" bodyend="192"/>
-        <references refid="class_disk2d_1a221d49036e16a07d2449518b0c165a92" compoundref="_disk2d_8_h" startline="151">expcoef</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a5288630a83478a6987537b72681bbea1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::inner_product</definition>
-        <argsstring>(std::function&lt; double(int, double)&gt; dens, int numr, int nlim=std::numeric_limits&lt; int &gt;::max())</argsstring>
-        <name>inner_product</name>
-        <qualifiedname>Disk2d::inner_product</qualifiedname>
-        <param>
-          <type>std::function&lt; double(int, double)&gt;</type>
-          <declname>dens</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nlim</declname>
-          <defval>std::numeric_limits&lt; int &gt;::max()</defval>
-        </param>
-        <briefdescription>
-<para>Compute the m=0 coefficients for the provided density profile. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="188" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1aa00177fafc293a7593af3048bb343ac3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::make_coefficients</definition>
-        <argsstring>()</argsstring>
-        <name>make_coefficients</name>
-        <qualifiedname>Disk2d::make_coefficients</qualifiedname>
-        <briefdescription>
-<para>Finish making the coefficients after accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="172" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1ae138ffa216f06265422eef752792ac33" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::setup_accumulation</definition>
-        <argsstring>()</argsstring>
-        <name>setup_accumulation</name>
-        <qualifiedname>Disk2d::setup_accumulation</qualifiedname>
-        <briefdescription>
-<para>Set up for accumulations by zeroing counters, allocated storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="169" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1a6513ba0d117243aaecf9d18ed65a9f28" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2d::write_coefficients</definition>
-        <argsstring>(const std::string &amp;outfile)</argsstring>
-        <name>write_coefficients</name>
-        <qualifiedname>Disk2d::write_coefficients</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>outfile</declname>
-        </param>
-        <briefdescription>
-<para>Write coefficients to a file for debugging. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="175" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk2d_1afe1948ed416c2f045a6009aa77bf10fd" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual Disk2d::~Disk2d</definition>
-        <argsstring>()</argsstring>
-        <name>~Disk2d</name>
-        <qualifiedname>Disk2d::~Disk2d</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="166" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Computes the potential, acceleration and density using an empirical function analysis for a flat <ref refid="class_bessel" kindref="compound">Bessel</ref> basis and a target density</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>acyltbl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale length of target density (default is 0.6)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rcylmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum value in the table for the radial basis functions (default is 0.0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rcylmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum value in the table for the radial basis functions in acyltbl units (default is 10.0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number radial coordinate knots in the table (default is 1000)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>knots</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number quadrature points for integrals in basis construction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>logr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>scales the <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref> grid logarithmically</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>model</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>name for <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref> (default: expon)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>biorth</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set for <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref> (default: bess)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the azimuthal order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmaxfid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radial order for the <ref refid="class_bessel" kindref="compound">Bessel</ref> basis used to construct the EOF</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radial order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numx</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of grid points in the scaled radial direction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numy</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of grid points in the scaled vertical direction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>NQDHT</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of <ref refid="class_bessel" kindref="compound">Bessel</ref> knots in the underlying Hankel transform used to get the vertical potential</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapR</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scaling method for radius (0=none, 1=rational) in the grid mapping</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmapZ</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scaling method for vertical height (0=none, 1=sinh, 2=rational) in the grid mapping</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>scale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the expansion factor to get the physical scale from the internal scale (default is 0.01)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cachename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the file cache for the 2d EOF basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>verbose</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true turns on some additional diagnostic info in <ref refid="class_biorth_cyl" kindref="compound">BiorthCyl</ref></para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>changes the minimum harmonic order for evaluation to some value &gt;=0</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mlim</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>changes the maximum harmonic order for evaluation to some value &lt;=mmax</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>changes the minimum radial order for evaluation to some value &gt;=0</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nlim</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>changes the maximum radial order for evaluation to some value &lt;=nmax</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EVEN_M</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>evaluates the expansion for even azimuthal harmonics only </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" line="83" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2d.H" bodystart="84" bodyend="193"/>
-    <listofallmembers>
-      <member refid="class_disk2d_1afae3f8327240c245c16c6f1f13bd0d64" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>accum_setup</name></member>
-      <member refid="class_disk2d_1a101896358c23dec008a8b0cee32b0f1c" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>accumulate</name></member>
-      <member refid="class_disk2d_1a21af8455280866fb7607222a66800201" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>accumulate</name></member>
-      <member refid="class_disk2d_1a2d034f84c0d04de26126608d63b724dc" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>accumulated_eval</name></member>
-      <member refid="class_disk2d_1a5f48168e084ba90ab34d04ec8739d2c2" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>acyltbl</name></member>
-      <member refid="class_disk2d_1a1136d383ae80114753df01fe3d4d23c7" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>biorth</name></member>
-      <member refid="class_disk2d_1a38da7932c9af589c04098894d8a61e21" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>coefs_made</name></member>
-      <member refid="class_disk2d_1ad8d664fee5f533ca072b01447f29912f" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>conf</name></member>
-      <member refid="class_disk2d_1ae3d47547afc0882b2eb5b38172bf26ee" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>cylmass</name></member>
-      <member refid="class_disk2d_1a5cf1b818c5f118099de9fb3c17e025f7" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>cylmass1</name></member>
-      <member refid="class_disk2d_1acf20d580cbe31b543a663a1f1530b323" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>dend</name></member>
-      <member refid="class_disk2d_1a32d15a1559d17750d1ed7a939fcd7ec9" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>Disk2d</name></member>
-      <member refid="class_disk2d_1a221d49036e16a07d2449518b0c165a92" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>expcoef</name></member>
-      <member refid="class_disk2d_1a997786327d5859e26c38c7b18e5ffa28" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>expcoef0</name></member>
-      <member refid="class_disk2d_1a76e162b8e4dd274927901880dce530de" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>get_coefs</name></member>
-      <member refid="class_disk2d_1aebd6e3673258a4c0f932b016c6ea69be" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>get_dens</name></member>
-      <member refid="class_disk2d_1a4062a255fe530a4c82ee6554adabb28d" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>get_dpotl</name></member>
-      <member refid="class_disk2d_1a6fe6eb51569ea9e92bcbbb15d3638baf" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>get_pot</name></member>
-      <member refid="class_disk2d_1a6ffa48102c4276bb872b5ce638f5cd8a" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>get_potl</name></member>
-      <member refid="class_disk2d_1a63ee411d9f3a5aa0ea0a7e56793878e5" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>get_potl_dens</name></member>
-      <member refid="class_disk2d_1aff75021afb085126215aabd3221fc1d2" prot="private" virt="virtual"><scope>Disk2d</scope><name>getRtable</name></member>
-      <member refid="class_disk2d_1a46efa0914b5caf12d92a8a8db0c89995" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>initialize</name></member>
-      <member refid="class_disk2d_1a5288630a83478a6987537b72681bbea1" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>inner_product</name></member>
-      <member refid="class_disk2d_1ac6fc5edb2d4538837b380556ec52fab1" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>knots</name></member>
-      <member refid="class_disk2d_1a6eef49d2011b29946adbeea0195365cf" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>logr</name></member>
-      <member refid="class_disk2d_1aa00177fafc293a7593af3048bb343ac3" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>make_coefficients</name></member>
-      <member refid="class_disk2d_1a1aef79044d348df479c7e57606209375" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>mmax</name></member>
-      <member refid="class_disk2d_1a56e8d381a9324b51a3ba29529e6056c8" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>model</name></member>
-      <member refid="class_disk2d_1a76e3d25513734b03ad6fef90bb9e9e65" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>nmax</name></member>
-      <member refid="class_disk2d_1a38da5855bfc8d38751d16631780512bc" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>nthrds</name></member>
-      <member refid="class_disk2d_1a4aa8d72e39f514b9706db3cbca513771" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>numr</name></member>
-      <member refid="class_disk2d_1a0c5ce15858c099820ce785ed3d4c5bd9" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>ortho</name></member>
-      <member refid="class_disk2d_1ab4be2ca5aa9f62c7ba2cf2f1643bbafc" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>potd</name></member>
-      <member refid="class_disk2d_1ad0245fee0e0009004439d3d2e21b6855" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>potl</name></member>
-      <member refid="class_disk2d_1a6c31244aaaa4f3e59196af2b480061bb" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>potr</name></member>
-      <member refid="class_disk2d_1a33c71b4b59ea0b6d3b6123f764de9a89" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>potz</name></member>
-      <member refid="class_disk2d_1aa0fc03cbff8a8a12d23562d5d933569c" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>rcylmax</name></member>
-      <member refid="class_disk2d_1a4cfb31d57dcf2d6a4b0f396239049fb8" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>rcylmin</name></member>
-      <member refid="class_disk2d_1a2deb54317f548f10d593884253e434ae" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>scale</name></member>
-      <member refid="class_disk2d_1acca2c24ab2d1f93f0a5024bcbf409810" prot="protected" virt="non-virtual"><scope>Disk2d</scope><name>setup_accum</name></member>
-      <member refid="class_disk2d_1ae138ffa216f06265422eef752792ac33" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>setup_accumulation</name></member>
-      <member refid="class_disk2d_1a3f3115795ca60bfb3407e956b39b9f3f" prot="private" virt="non-virtual"><scope>Disk2d</scope><name>valid_keys</name></member>
-      <member refid="class_disk2d_1a6513ba0d117243aaecf9d18ed65a9f28" prot="public" virt="non-virtual"><scope>Disk2d</scope><name>write_coefficients</name></member>
-      <member refid="class_disk2d_1afe1948ed416c2f045a6009aa77bf10fd" prot="public" virt="virtual"><scope>Disk2d</scope><name>~Disk2d</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_disk2d_halo.xml b/doxyxml/class_disk2d_halo.xml
deleted file mode 100644
index eb7f8da..0000000
--- a/doxyxml/class_disk2d_halo.xml
+++ /dev/null
@@ -1,2413 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk2d_halo" kind="class" language="C++" prot="public">
-    <compoundname>Disk2dHalo</compoundname>
-    <includes refid="_disk2d_halo_8_h" local="no">Disk2dHalo.H</includes>
-    <innerclass refid="class_disk2d_halo_1_1_c_lin" prot="private">Disk2dHalo::CLin</innerclass>
-    <innerclass refid="class_disk2d_halo_1_1_c_log" prot="private">Disk2dHalo::CLog</innerclass>
-    <innerclass refid="class_disk2d_halo_1_1_c_map" prot="private">Disk2dHalo::CMap</innerclass>
-    <innerclass refid="class_disk2d_halo_1_1_c_rat" prot="private">Disk2dHalo::CRat</innerclass>
-    <innerclass refid="class_disk2d_halo_1_1_gen_phi" prot="private">Disk2dHalo::GenPhi</innerclass>
-    <sectiondef kind="public-type">
-      <memberdef kind="enum" id="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" prot="public" static="no" strong="no">
-        <type></type>
-        <name>DiskGenType</name>
-        <qualifiedname>Disk2dHalo::DiskGenType</qualifiedname>
-        <enumvalue id="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a3aa8cd1980670f058bd5fe5f8cb1df89" prot="public">
-          <name>Jeans</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a219c64c412e54700dd4e0d8692e395bc" prot="public">
-          <name>Asymmetric</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27a92c6632d299e44390ad47aad42671824" prot="public">
-          <name>Epicyclic</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="220" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="220" bodyend="220"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_disk2d_halo_1a55a306d3cb565a3cc0745d7407f2aacd" prot="private" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2dHalo::asytable</definition>
-        <argsstring></argsstring>
-        <name>asytable</name>
-        <qualifiedname>Disk2dHalo::asytable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="50" column="37" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="50" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int Disk2dHalo::bufcnt</definition>
-        <argsstring></argsstring>
-        <name>bufcnt</name>
-        <qualifiedname>Disk2dHalo::bufcnt</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="66" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="66" bodyend="-1"/>
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-        <type>std::ostringstream</type>
-        <definition>std::ostringstream Disk2dHalo::bufout</definition>
-        <argsstring></argsstring>
-        <name>bufout</name>
-        <qualifiedname>Disk2dHalo::bufout</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="67" column="22" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="67" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a998ba7968307bcf6b771b0c28e0aea8c" prot="private" static="no" mutable="no">
-        <type>const int</type>
-        <definition>const int Disk2dHalo::bunchcnt</definition>
-        <argsstring></argsstring>
-        <name>bunchcnt</name>
-        <qualifiedname>Disk2dHalo::bunchcnt</qualifiedname>
-        <initializer>= 16384</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="65" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="65" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a80d992e2decf960cbbe756ef8a98bf5b" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::center_pos[3]</definition>
-        <argsstring>[3]</argsstring>
-        <name>center_pos</name>
-        <qualifiedname>Disk2dHalo::center_pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="45" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="45" bodyend="-1"/>
-        <referencedby refid="class_disk2d_halo_1ae0c5d8ef22780052a81fedec8e881681" compoundref="_disk2d_halo_8_h" startline="340" endline="345">set_pos_origin</referencedby>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a023c6aed59a7bc2415feaa05b16b314d" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::center_vel[3]</definition>
-        <argsstring>[3]</argsstring>
-        <name>center_vel</name>
-        <qualifiedname>Disk2dHalo::center_vel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="45" column="21" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="45" bodyend="-1"/>
-        <referencedby refid="class_disk2d_halo_1ae4dca59edeca9643c49eb5c60a1eece4" compoundref="_disk2d_halo_8_h" startline="347" endline="352">set_vel_origin</referencedby>
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-      <memberdef kind="variable" id="class_disk2d_halo_1acc8c8db398bc896d727a5d1eecc9f43a" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_disk2d_halo_1_1_c_map" kindref="compound">CMap</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;CMap&gt; Disk2dHalo::cmap</definition>
-        <argsstring></argsstring>
-        <name>cmap</name>
-        <qualifiedname>Disk2dHalo::cmap</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="134" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="134" bodyend="-1"/>
-        <referencedby refid="class_disk2d_halo_1a40e6c12222f62fe49b456e92313be1a4" compoundref="_disk2d_halo_8_h" startline="138" endline="150">make_cmap</referencedby>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a842077a0af4b18292e76ffe2ecb00990" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Disk2dHalo::com</definition>
-        <argsstring></argsstring>
-        <name>com</name>
-        <qualifiedname>Disk2dHalo::com</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="62" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="62" bodyend="-1"/>
-        <referencedby refid="class_disk2d_halo_1afeac7b1385458b2efc656dc8d8f3ef5f" compoundref="_disk2d_halo_8_h" startline="397" endline="397">zero_com</referencedby>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a25befa93079bf570ff1a2501df06241c" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Disk2dHalo::cov</definition>
-        <argsstring></argsstring>
-        <name>cov</name>
-        <qualifiedname>Disk2dHalo::cov</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="63" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="63" bodyend="-1"/>
-        <referencedby refid="class_disk2d_halo_1a3df7adcdffad207c62b5f1309a4aa097" compoundref="_disk2d_halo_8_h" startline="399" endline="399">zero_cov</referencedby>
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-      <memberdef kind="variable" id="class_disk2d_halo_1aff8f16fe4f86093aed59242f31953e61" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::dc</definition>
-        <argsstring></argsstring>
-        <name>dc</name>
-        <qualifiedname>Disk2dHalo::dc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="54" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="54" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a9c86a0d338b838f9a61b17eb20669c85" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Disk2dHalo::DF</definition>
-        <argsstring></argsstring>
-        <name>DF</name>
-        <qualifiedname>Disk2dHalo::DF</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="60" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="60" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1ac1b55e46d5a3dd65945b359f76e6ab61" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_exponential_disk" kindref="compound">ExponentialDisk</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;ExponentialDisk&gt; Disk2dHalo::disk</definition>
-        <argsstring></argsstring>
-        <name>disk</name>
-        <qualifiedname>Disk2dHalo::disk</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="43" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="43" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1ae82e9f5f21bfd3350c6c38015048bb1a" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::dmass</definition>
-        <argsstring></argsstring>
-        <name>dmass</name>
-        <qualifiedname>Disk2dHalo::dmass</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="44" column="22" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="44" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1af1e413c1e25b2bd839b9b8774e7a097e" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::dP</definition>
-        <argsstring></argsstring>
-        <name>dP</name>
-        <qualifiedname>Disk2dHalo::dP</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="51" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="51" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::dR</definition>
-        <argsstring></argsstring>
-        <name>dR</name>
-        <qualifiedname>Disk2dHalo::dR</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="51" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="51" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::dr</definition>
-        <argsstring></argsstring>
-        <name>dr</name>
-        <qualifiedname>Disk2dHalo::dr</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="54" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="54" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::dRh</definition>
-        <argsstring></argsstring>
-        <name>dRh</name>
-        <qualifiedname>Disk2dHalo::dRh</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="86" column="22" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="86" bodyend="-1"/>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2dHalo::dv2table</definition>
-        <argsstring></argsstring>
-        <name>dv2table</name>
-        <qualifiedname>Disk2dHalo::dv2table</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="50" column="28" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="50" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::dZ</definition>
-        <argsstring></argsstring>
-        <name>dZ</name>
-        <qualifiedname>Disk2dHalo::dZ</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="51" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="51" bodyend="-1"/>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Disk2dHalo::epitable</definition>
-        <argsstring></argsstring>
-        <name>epitable</name>
-        <qualifiedname>Disk2dHalo::epitable</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="50" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="50" bodyend="-1"/>
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-        <definition>std::shared_ptr&lt;Disk2d&gt; Disk2dHalo::expandd</definition>
-        <argsstring></argsstring>
-        <name>expandd</name>
-        <qualifiedname>Disk2dHalo::expandd</qualifiedname>
-        <briefdescription>
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-        <definition>SphericalSLptr Disk2dHalo::expandh</definition>
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-        <definition>std::shared_ptr&lt;SphericalModelTable&gt; Disk2dHalo::halo</definition>
-        <argsstring></argsstring>
-        <name>halo</name>
-        <qualifiedname>Disk2dHalo::halo</qualifiedname>
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-        <argsstring></argsstring>
-        <name>halo2</name>
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-        <argsstring></argsstring>
-        <name>halo3</name>
-        <qualifiedname>Disk2dHalo::halo3</qualifiedname>
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-        <type>Eigen::MatrixXd</type>
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-        <name>halotable</name>
-        <qualifiedname>Disk2dHalo::halotable</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="53" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="53" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>hDmax</name>
-        <qualifiedname>Disk2dHalo::hDmax</qualifiedname>
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-        <qualifiedname>Disk2dHalo::hDmin</qualifiedname>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a9e16f3b2057d167bb17fc5e02a96eb8f" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string Disk2dHalo::mtype</definition>
-        <argsstring></argsstring>
-        <name>mtype</name>
-        <qualifiedname>Disk2dHalo::mtype</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="136" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="136" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1ae8dbed923b2ca06fc001374563ce96ba" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_spherical_model_multi" kindref="compound">SphericalModelMulti</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;SphericalModelMulti&gt; Disk2dHalo::multi</definition>
-        <argsstring></argsstring>
-        <name>multi</name>
-        <qualifiedname>Disk2dHalo::multi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="41" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1ac14a52162111ad9d5784e14c055caaa7" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Disk2dHalo::MULTI</definition>
-        <argsstring></argsstring>
-        <name>MULTI</name>
-        <qualifiedname>Disk2dHalo::MULTI</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="61" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="61" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a22bcf29169b7272d63ddb3e084445e23" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_add_disk" kindref="compound">AddDisk</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;AddDisk&gt; Disk2dHalo::newmod</definition>
-        <argsstring></argsstring>
-        <name>newmod</name>
-        <qualifiedname>Disk2dHalo::newmod</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="39" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="39" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1aa1f4859f54a6e59b00cfee8af6fd675b" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; Disk2dHalo::nhD</definition>
-        <argsstring></argsstring>
-        <name>nhD</name>
-        <qualifiedname>Disk2dHalo::nhD</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="87" column="12" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="87" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1afb5c4f779a5b99cf55ffc56b009cdc37" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; Disk2dHalo::nhM</definition>
-        <argsstring></argsstring>
-        <name>nhM</name>
-        <qualifiedname>Disk2dHalo::nhM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="88" column="12" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="88" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a0be93a05f48591a0dc79fe5f60819ea8" prot="private" static="no" mutable="no">
-        <type>vector&lt; unsigned &gt;</type>
-        <definition>vector&lt;unsigned&gt; Disk2dHalo::nhN</definition>
-        <argsstring></argsstring>
-        <name>nhN</name>
-        <qualifiedname>Disk2dHalo::nhN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="89" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="89" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a62454fecaef03d9748c55b757d9275ad" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::nzepi</definition>
-        <argsstring></argsstring>
-        <name>nzepi</name>
-        <qualifiedname>Disk2dHalo::nzepi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="91" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="91" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1ac0e4716e40699325a42453ba9483dfd0" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::nzero</definition>
-        <argsstring></argsstring>
-        <name>nzero</name>
-        <qualifiedname>Disk2dHalo::nzero</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="90" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="90" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a2f7d5026e9189ab31db46b0d8907b08d" prot="private" static="no" mutable="no">
-        <type>std::normal_distribution</type>
-        <definition>std::normal_distribution Disk2dHalo::rndN</definition>
-        <argsstring></argsstring>
-        <name>rndN</name>
-        <qualifiedname>Disk2dHalo::rndN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="58" column="4" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="58" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a8e8cd5392a4c2876f70bd21c45a0292f" prot="private" static="no" mutable="no">
-        <type>std::uniform_real_distribution</type>
-        <definition>std::uniform_real_distribution Disk2dHalo::rndU</definition>
-        <argsstring></argsstring>
-        <name>rndU</name>
-        <qualifiedname>Disk2dHalo::rndU</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="57" column="4" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="57" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a8aa6e319cf14b5e3553423f864764d9b" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::scalelength</definition>
-        <argsstring></argsstring>
-        <name>scalelength</name>
-        <qualifiedname>Disk2dHalo::scalelength</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="44" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="44" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1ac337d5749bd5d9b8b1908c774b9c0ebd" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::sigma0</definition>
-        <argsstring></argsstring>
-        <name>sigma0</name>
-        <qualifiedname>Disk2dHalo::sigma0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="51" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="51" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a4225fa199c80bac517d54d67f54068f9" prot="private" static="no" mutable="no">
-        <type><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" kindref="member">DiskGenType</ref></type>
-        <definition>DiskGenType Disk2dHalo::type</definition>
-        <argsstring></argsstring>
-        <name>type</name>
-        <qualifiedname>Disk2dHalo::type</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="407" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="407" bodyend="-1"/>
-        <referencedby refid="class_disk2d_halo_1a40e6c12222f62fe49b456e92313be1a4" compoundref="_disk2d_halo_8_h" startline="138" endline="150">make_cmap</referencedby>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a4796c8cd7f224eccc3716e832c53f863" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::Xmax</definition>
-        <argsstring></argsstring>
-        <name>Xmax</name>
-        <qualifiedname>Disk2dHalo::Xmax</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="135" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="135" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::Xmin</definition>
-        <argsstring></argsstring>
-        <name>Xmin</name>
-        <qualifiedname>Disk2dHalo::Xmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="135" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="135" bodyend="-1"/>
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-        <type>const unsigned</type>
-        <definition>const unsigned Disk2dHalo::mh</definition>
-        <argsstring></argsstring>
-        <name>mh</name>
-        <qualifiedname>Disk2dHalo::mh</qualifiedname>
-        <initializer>= 5</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="84" column="25" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="84" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>nh</name>
-        <qualifiedname>Disk2dHalo::nh</qualifiedname>
-        <initializer>= 50</initializer>
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-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="82" column="25" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="82" bodyend="-1"/>
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-        <type>const int</type>
-        <definition>const int Disk2dHalo::use_spline</definition>
-        <argsstring></argsstring>
-        <name>use_spline</name>
-        <qualifiedname>Disk2dHalo::use_spline</qualifiedname>
-        <initializer>= 0</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="95" column="20" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="95" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Disk2dHalo::ALLOW</definition>
-        <argsstring></argsstring>
-        <name>ALLOW</name>
-        <qualifiedname>Disk2dHalo::ALLOW</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="281" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="281" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::AMPL</definition>
-        <argsstring></argsstring>
-        <name>AMPL</name>
-        <qualifiedname>Disk2dHalo::AMPL</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="267" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="267" bodyend="-1"/>
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-        <type>bool</type>
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-        <argsstring></argsstring>
-        <name>CHEBY</name>
-        <qualifiedname>Disk2dHalo::CHEBY</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="277" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="277" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>COMPRESSION</name>
-        <qualifiedname>Disk2dHalo::COMPRESSION</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="246" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="246" bodyend="-1"/>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>DR_DF</name>
-        <qualifiedname>Disk2dHalo::DR_DF</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="270" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="270" bodyend="-1"/>
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-        <type>std::map&lt; std::string, <ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" kindref="member">DiskGenType</ref> &gt;</type>
-        <definition>std::map&lt;std::string, DiskGenType&gt; Disk2dHalo::getDiskGenType</definition>
-        <argsstring></argsstring>
-        <name>getDiskGenType</name>
-        <qualifiedname>Disk2dHalo::getDiskGenType</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="221" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="221" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int Disk2dHalo::ITMAX</definition>
-        <argsstring></argsstring>
-        <name>ITMAX</name>
-        <qualifiedname>Disk2dHalo::ITMAX</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="287" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="287" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool Disk2dHalo::LOGR</definition>
-        <argsstring></argsstring>
-        <name>LOGR</name>
-        <qualifiedname>Disk2dHalo::LOGR</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="275" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="275" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int Disk2dHalo::MPERT</definition>
-        <argsstring></argsstring>
-        <name>MPERT</name>
-        <qualifiedname>Disk2dHalo::MPERT</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="265" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="265" bodyend="-1"/>
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-        <type>unsigned</type>
-        <definition>unsigned Disk2dHalo::NBUF</definition>
-        <argsstring></argsstring>
-        <name>NBUF</name>
-        <qualifiedname>Disk2dHalo::NBUF</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-      <memberdef kind="variable" id="class_disk2d_halo_1aa49662d0c9f9f4ce956a54414016efde" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::NCHEB</definition>
-        <argsstring></argsstring>
-        <name>NCHEB</name>
-        <qualifiedname>Disk2dHalo::NCHEB</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="279" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="279" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1ae5fba19fae3fc3e72eb117a2ac39531e" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::NDP</definition>
-        <argsstring></argsstring>
-        <name>NDP</name>
-        <qualifiedname>Disk2dHalo::NDP</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="223" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="223" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1ac6dc73df752a1d71faa331ac5a35a031" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::NDR</definition>
-        <argsstring></argsstring>
-        <name>NDR</name>
-        <qualifiedname>Disk2dHalo::NDR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="229" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="229" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1a7fd790abd005811091d28e8d1d960adb" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::NDZ</definition>
-        <argsstring></argsstring>
-        <name>NDZ</name>
-        <qualifiedname>Disk2dHalo::NDZ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="226" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="226" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1a27e0ab15c73f135097d5ffe823bebe0e" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::NHR</definition>
-        <argsstring></argsstring>
-        <name>NHR</name>
-        <qualifiedname>Disk2dHalo::NHR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="232" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="232" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1adac942d7d49a8a3d0acb553c8dbc439b" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::NHT</definition>
-        <argsstring></argsstring>
-        <name>NHT</name>
-        <qualifiedname>Disk2dHalo::NHT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="235" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="235" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1ac5e7d190a7e92c53cd9d2b1ec01d7fe6" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::NUMDF</definition>
-        <argsstring></argsstring>
-        <name>NUMDF</name>
-        <qualifiedname>Disk2dHalo::NUMDF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="294" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="294" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a0ed20f3f288b7db27b0da796a08ce4fb" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::Q</definition>
-        <argsstring></argsstring>
-        <name>Q</name>
-        <qualifiedname>Disk2dHalo::Q</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="255" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="255" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1aace0c0e6e9a7c43359fbd356b3d318ac" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::R_DF</definition>
-        <argsstring></argsstring>
-        <name>R_DF</name>
-        <qualifiedname>Disk2dHalo::R_DF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="269" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="269" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1a535c9bc2fcea3e1be4d60668344d0392" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::RA</definition>
-        <argsstring></argsstring>
-        <name>RA</name>
-        <qualifiedname>Disk2dHalo::RA</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="292" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="292" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1a79d158c80fe187bba86a1bb34dd9de57" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::RDMAX</definition>
-        <argsstring></argsstring>
-        <name>RDMAX</name>
-        <qualifiedname>Disk2dHalo::RDMAX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="244" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="244" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1a5fd5c3ae3d88299dc74698fec59ad7a4" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::RDMIN</definition>
-        <argsstring></argsstring>
-        <name>RDMIN</name>
-        <qualifiedname>Disk2dHalo::RDMIN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="242" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="242" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1a4425b5b398bb6e230d864f856b1b4f01" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::RHMAX</definition>
-        <argsstring></argsstring>
-        <name>RHMAX</name>
-        <qualifiedname>Disk2dHalo::RHMAX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="240" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="240" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk2d_halo_1a771c960b9acbb3def41209b233d90c51" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::RHMIN</definition>
-        <argsstring></argsstring>
-        <name>RHMIN</name>
-        <qualifiedname>Disk2dHalo::RHMIN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="238" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="238" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1ab4923e334da0e1b0a1c464a1c4411910" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::RNUM</definition>
-        <argsstring></argsstring>
-        <name>RNUM</name>
-        <qualifiedname>Disk2dHalo::RNUM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="296" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="296" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a46646f3c35ad4a60d43cb178bd3fb8c7" prot="public" static="yes" mutable="no">
-        <type>string</type>
-        <definition>string Disk2dHalo::RUNTAG</definition>
-        <argsstring></argsstring>
-        <name>RUNTAG</name>
-        <qualifiedname>Disk2dHalo::RUNTAG</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="309" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="309" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a1510ea1c4e4f7aa1d4f9cedb796cf9da" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int Disk2dHalo::SEED</definition>
-        <argsstring></argsstring>
-        <name>SEED</name>
-        <qualifiedname>Disk2dHalo::SEED</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="284" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="284" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk2d_halo_1a8e4323d066057ac696b92b0f30b9eae9" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Disk2dHalo::SHFACTOR</definition>
-        <argsstring></argsstring>
-        <name>SHFACTOR</name>
-        <qualifiedname>Disk2dHalo::SHFACTOR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="249" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="249" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::SIG0</definition>
-        <argsstring></argsstring>
-        <name>SIG0</name>
-        <qualifiedname>Disk2dHalo::SIG0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="262" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="262" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>TOLE</name>
-        <qualifiedname>Disk2dHalo::TOLE</qualifiedname>
-        <briefdescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <name>use_mono</name>
-        <qualifiedname>Disk2dHalo::use_mono</qualifiedname>
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-        <name>VFLAG</name>
-        <qualifiedname>Disk2dHalo::VFLAG</qualifiedname>
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-        <name>XI</name>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <qualifiedname>Disk2dHalo::table_halo_disp</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="70" column="8"/>
-        <referencedby refid="class_disk2d_halo_1ac8fe0257dea77ab69aa2beea9cc2e1f6" compoundref="_disk2d_halo_8_h" startline="71" endline="75">write_record</referencedby>
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-        <type>double</type>
-        <definition>double Disk2dHalo::a_drift</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>a_drift</name>
-        <qualifiedname>Disk2dHalo::a_drift</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
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-        <param>
-          <type>double</type>
-          <declname>yp</declname>
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-          <type>double</type>
-          <declname>zp</declname>
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-        <type>double</type>
-        <definition>double Disk2dHalo::deri_pot</definition>
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-        <name>deri_pot</name>
-        <qualifiedname>Disk2dHalo::deri_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
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-        <param>
-          <type>double</type>
-          <declname>yp</declname>
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-        <param>
-          <type>double</type>
-          <declname>zp</declname>
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-          <type>int</type>
-          <declname>n</declname>
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-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="362" column="10"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::deri_pot_disk</definition>
-        <argsstring>(double xp, double yp, double zp, int n)</argsstring>
-        <name>deri_pot_disk</name>
-        <qualifiedname>Disk2dHalo::deri_pot_disk</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
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-        <param>
-          <type>double</type>
-          <declname>yp</declname>
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-        <param>
-          <type>double</type>
-          <declname>zp</declname>
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-        <param>
-          <type>int</type>
-          <declname>n</declname>
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-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="364" column="10"/>
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-        <type>double</type>
-        <definition>double Disk2dHalo::deri_pot_halo</definition>
-        <argsstring>(double xp, double yp, double zp, int n)</argsstring>
-        <name>deri_pot_halo</name>
-        <qualifiedname>Disk2dHalo::deri_pot_halo</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
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-        <param>
-          <type>double</type>
-          <declname>yp</declname>
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-        <param>
-          <type>double</type>
-          <declname>zp</declname>
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-        <param>
-          <type>int</type>
-          <declname>n</declname>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="366" column="10"/>
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-        <type></type>
-        <definition>Disk2dHalo::Disk2dHalo</definition>
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-        <name>Disk2dHalo</name>
-        <qualifiedname>Disk2dHalo::Disk2dHalo</qualifiedname>
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-<para>Dummy Constructor. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="312" column="3"/>
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-        <definition>Disk2dHalo::Disk2dHalo</definition>
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-        <name>Disk2dHalo</name>
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-          <type>const <ref refid="class_disk2d_halo" kindref="compound">Disk2dHalo</ref> &amp;</type>
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-<para>Copy constructor. </para>
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-        <type></type>
-        <definition>Disk2dHalo::Disk2dHalo</definition>
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-        <name>Disk2dHalo</name>
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-          <type>std::shared_ptr&lt; <ref refid="class_disk2d" kindref="compound">Disk2d</ref> &gt;</type>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
-          <declname>DMass</declname>
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-        <param>
-          <type>std::string</type>
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-        <param>
-          <type>string &amp;</type>
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-        <param>
-          <type>int</type>
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-          <type><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" kindref="member">DiskGenType</ref></type>
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-<para>Constructor: equal mass. </para>
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-        </inbodydescription>
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-        <definition>Disk2dHalo::Disk2dHalo</definition>
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-        <name>Disk2dHalo</name>
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-          <type><ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref></type>
-          <declname>haloexp</declname>
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-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_disk2d" kindref="compound">Disk2d</ref> &gt;</type>
-          <declname>diskexp</declname>
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-        <param>
-          <type>double</type>
-          <declname>A</declname>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>std::string</type>
-          <declname>maptype</declname>
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-        <param>
-          <type>string &amp;</type>
-          <declname>filename1</declname>
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-        <param>
-          <type>int</type>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>string &amp;</type>
-          <declname>filename2</declname>
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-        <param>
-          <type>int</type>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type><ref refid="class_disk2d_halo_1a46ce64fbfe1c634c74f52fc4ba4bce27" kindref="member">DiskGenType</ref></type>
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-<para>Constructor: multi mass. </para>
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-        <name>disk_eval</name>
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-          <type>double &amp;</type>
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-          <type>double &amp;</type>
-          <declname>fz</declname>
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-        <param>
-          <type>double &amp;</type>
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-        <type>void</type>
-        <definition>void Disk2dHalo::disk_model</definition>
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-        <name>disk_model</name>
-        <qualifiedname>Disk2dHalo::disk_model</qualifiedname>
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-          <type>const std::string &amp;</type>
-          <declname>modfile</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="404" column="8"/>
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-        <type>double</type>
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-        <name>epi</name>
-        <qualifiedname>Disk2dHalo::epi</qualifiedname>
-        <param>
-          <type>double</type>
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-        <type>double</type>
-        <definition>double Disk2dHalo::get_ddpot</definition>
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-        <name>get_ddpot</name>
-        <qualifiedname>Disk2dHalo::get_ddpot</qualifiedname>
-        <param>
-          <type>double</type>
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-        <type>double</type>
-        <definition>double Disk2dHalo::get_disp</definition>
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-        <name>get_disp</name>
-        <qualifiedname>Disk2dHalo::get_disp</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
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-        <param>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>double Disk2dHalo::get_dpot</definition>
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-        <name>get_dpot</name>
-        <qualifiedname>Disk2dHalo::get_dpot</qualifiedname>
-        <param>
-          <type>double</type>
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-        <param>
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-        <type>double</type>
-        <definition>double Disk2dHalo::get_hdpot</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>get_hdpot</name>
-        <qualifiedname>Disk2dHalo::get_hdpot</qualifiedname>
-        <param>
-          <type>double</type>
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-        <type>double</type>
-        <definition>double Disk2dHalo::get_hpot</definition>
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-        <name>get_hpot</name>
-        <qualifiedname>Disk2dHalo::get_hpot</qualifiedname>
-        <param>
-          <type>double</type>
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-        <param>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>void</type>
-        <definition>void Disk2dHalo::profile</definition>
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-        <name>profile</name>
-        <qualifiedname>Disk2dHalo::profile</qualifiedname>
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-          <type>std::ostream &amp;</type>
-          <declname>rotfile</declname>
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-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>dpart</declname>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>int</type>
-          <declname>numr</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void Disk2dHalo::set_disk_coordinates</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;pdisk, int ndisk, int npart)</argsstring>
-        <name>set_disk_coordinates</name>
-        <qualifiedname>Disk2dHalo::set_disk_coordinates</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>pdisk</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ndisk</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>npart</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="335" column="8"/>
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-        <type>void</type>
-        <definition>void Disk2dHalo::set_halo</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;phalo, int nhalo, int npart)</argsstring>
-        <name>set_halo</name>
-        <qualifiedname>Disk2dHalo::set_halo</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>phalo</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nhalo</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>npart</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="333" column="8"/>
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-      <memberdef kind="function" id="class_disk2d_halo_1a751eca056421ca48114b140539f391a3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2dHalo::set_halo_coordinates</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;phalo, int nhalo, int npart)</argsstring>
-        <name>set_halo_coordinates</name>
-        <qualifiedname>Disk2dHalo::set_halo_coordinates</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>phalo</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nhalo</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>npart</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="334" column="8"/>
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-        <type>void</type>
-        <definition>void Disk2dHalo::set_halo_table_multi</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;phalo)</argsstring>
-        <name>set_halo_table_multi</name>
-        <qualifiedname>Disk2dHalo::set_halo_table_multi</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>phalo</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="338" column="8"/>
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-      <memberdef kind="function" id="class_disk2d_halo_1a392f416aaabd3c0fbc914cc53853f4a5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Disk2dHalo::set_halo_table_single</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;phalo)</argsstring>
-        <name>set_halo_table_single</name>
-        <qualifiedname>Disk2dHalo::set_halo_table_single</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>phalo</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="337" column="8"/>
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-        <type>void</type>
-        <definition>void Disk2dHalo::set_pos_origin</definition>
-        <argsstring>(double &amp;x, double &amp;y, double &amp;z)</argsstring>
-        <name>set_pos_origin</name>
-        <qualifiedname>Disk2dHalo::set_pos_origin</qualifiedname>
-        <param>
-          <type>double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_disk2d_halo_1a80d992e2decf960cbbe756ef8a98bf5b" compoundref="_disk2d_halo_8_h" startline="45">center_pos</references>
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-        <type>void</type>
-        <definition>void Disk2dHalo::set_vel_disk</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;part)</argsstring>
-        <name>set_vel_disk</name>
-        <qualifiedname>Disk2dHalo::set_vel_disk</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>part</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="383" column="8"/>
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-        <type>void</type>
-        <definition>void Disk2dHalo::set_vel_halo</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;part)</argsstring>
-        <name>set_vel_halo</name>
-        <qualifiedname>Disk2dHalo::set_vel_halo</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>part</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void Disk2dHalo::set_vel_origin</definition>
-        <argsstring>(double &amp;x, double &amp;y, double &amp;z)</argsstring>
-        <name>set_vel_origin</name>
-        <qualifiedname>Disk2dHalo::set_vel_origin</qualifiedname>
-        <param>
-          <type>double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_disk2d_halo_1a023c6aed59a7bc2415feaa05b16b314d" compoundref="_disk2d_halo_8_h" startline="45">center_vel</references>
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-        <type>void</type>
-        <definition>void Disk2dHalo::table_disk</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;part)</argsstring>
-        <name>table_disk</name>
-        <qualifiedname>Disk2dHalo::table_disk</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>part</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="373" column="8"/>
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-        <type>void</type>
-        <definition>void Disk2dHalo::table_halo</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;part)</argsstring>
-        <name>table_halo</name>
-        <qualifiedname>Disk2dHalo::table_halo</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>part</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="385" column="8"/>
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-      <memberdef kind="function" id="class_disk2d_halo_1a8dfec313da40e7f902a56df55d83ece1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Disk2dHalo::v_circ</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>v_circ</name>
-        <qualifiedname>Disk2dHalo::v_circ</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void Disk2dHalo::virial_ratio</definition>
-        <argsstring>(const char *, const char *)</argsstring>
-        <name>virial_ratio</name>
-        <qualifiedname>Disk2dHalo::virial_ratio</qualifiedname>
-        <param>
-          <type>const char *</type>
-        </param>
-        <param>
-          <type>const char *</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void Disk2dHalo::virial_ratio</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;hpart, vector&lt; Particle &gt; &amp;dpart)</argsstring>
-        <name>virial_ratio</name>
-        <qualifiedname>Disk2dHalo::virial_ratio</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>hpart</declname>
-        </param>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>dpart</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double Disk2dHalo::vp_disp2</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>vp_disp2</name>
-        <qualifiedname>Disk2dHalo::vp_disp2</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>double Disk2dHalo::vr_disp2</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>vr_disp2</name>
-        <qualifiedname>Disk2dHalo::vr_disp2</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
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-        <type>void</type>
-        <definition>void Disk2dHalo::write_file</definition>
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-        <name>write_file</name>
-        <qualifiedname>Disk2dHalo::write_file</qualifiedname>
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-        <param>
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-        <briefdescription>
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-        <type>void</type>
-        <definition>void Disk2dHalo::zero_com</definition>
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-        <name>zero_com</name>
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-        <references refid="class_disk2d_halo_1a842077a0af4b18292e76ffe2ecb00990" compoundref="_disk2d_halo_8_h" startline="62">com</references>
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-        <type>void</type>
-        <definition>void Disk2dHalo::zero_cov</definition>
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-        <name>zero_cov</name>
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-        <references refid="class_disk2d_halo_1a25befa93079bf570ff1a2501df06241c" compoundref="_disk2d_halo_8_h" startline="63">cov</references>
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-<para>Destructor. </para>
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-      <member refid="class_disk2d_halo_1a32e2546bd93e54ab078bdb7c7c6c8cad" prot="public" virt="non-virtual"><scope>Disk2dHalo</scope><name>XI</name></member>
-      <member refid="class_disk2d_halo_1a4796c8cd7f224eccc3716e832c53f863" prot="private" virt="non-virtual"><scope>Disk2dHalo</scope><name>Xmax</name></member>
-      <member refid="class_disk2d_halo_1a069a3b910f3addabe03be7a20d2dbf5a" prot="private" virt="non-virtual"><scope>Disk2dHalo</scope><name>Xmin</name></member>
-      <member refid="class_disk2d_halo_1afeac7b1385458b2efc656dc8d8f3ef5f" prot="public" virt="non-virtual"><scope>Disk2dHalo</scope><name>zero_com</name></member>
-      <member refid="class_disk2d_halo_1a3df7adcdffad207c62b5f1309a4aa097" prot="public" virt="non-virtual"><scope>Disk2dHalo</scope><name>zero_cov</name></member>
-      <member refid="class_disk2d_halo_1a383e56000c197c58728676c551155e53" prot="public" virt="non-virtual"><scope>Disk2dHalo</scope><name>~Disk2dHalo</name></member>
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diff --git a/doxyxml/class_disk2d_halo_1_1_c_lin.xml b/doxyxml/class_disk2d_halo_1_1_c_lin.xml
deleted file mode 100644
index 16db2a5..0000000
--- a/doxyxml/class_disk2d_halo_1_1_c_lin.xml
+++ /dev/null
@@ -1,80 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk2d_halo_1_1_c_lin" kind="class" language="C++" prot="private">
-    <compoundname>Disk2dHalo::CLin</compoundname>
-    <basecompoundref refid="class_disk2d_halo_1_1_c_map" prot="public" virt="non-virtual">Disk2dHalo::CMap</basecompoundref>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_disk2d_halo_1_1_c_lin_1aa7274a55e8e6a96928c84b582986ec6f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double Disk2dHalo::CLin::r_to_x</definition>
-        <argsstring>(double r)</argsstring>
-        <name>r_to_x</name>
-        <qualifiedname>Disk2dHalo::CLin::r_to_x</qualifiedname>
-        <reimplements refid="class_disk2d_halo_1_1_c_map_1ac5cd1316336bf98be37c7f82b8c8cf4b">r_to_x</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="109" column="20" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="109" bodyend="109"/>
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-      <memberdef kind="function" id="class_disk2d_halo_1_1_c_lin_1af93436c0100ac068caabe6ecd407f8ce" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double Disk2dHalo::CLin::x_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>x_to_r</name>
-        <qualifiedname>Disk2dHalo::CLin::x_to_r</qualifiedname>
-        <reimplements refid="class_disk2d_halo_1_1_c_map_1ace3c3eccd3221b0517dd2eb5b8fefb0f">x_to_r</reimplements>
-        <param>
-          <type>double</type>
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-        <detaileddescription>
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-        <label>Disk2dHalo::CLin</label>
-        <link refid="class_disk2d_halo_1_1_c_lin"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Disk2dHalo::CMap</label>
-        <link refid="class_disk2d_halo_1_1_c_map"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>Disk2dHalo::CLin</label>
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-        <childnode refid="2" relation="public-inheritance">
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-        <label>Disk2dHalo::CMap</label>
-        <link refid="class_disk2d_halo_1_1_c_map"/>
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-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="104" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="105" bodyend="110"/>
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diff --git a/doxyxml/class_disk2d_halo_1_1_c_log.xml b/doxyxml/class_disk2d_halo_1_1_c_log.xml
deleted file mode 100644
index b148a18..0000000
--- a/doxyxml/class_disk2d_halo_1_1_c_log.xml
+++ /dev/null
@@ -1,80 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk2d_halo_1_1_c_log" kind="class" language="C++" prot="private">
-    <compoundname>Disk2dHalo::CLog</compoundname>
-    <basecompoundref refid="class_disk2d_halo_1_1_c_map" prot="public" virt="non-virtual">Disk2dHalo::CMap</basecompoundref>
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-        <type>double</type>
-        <definition>virtual double Disk2dHalo::CLog::r_to_x</definition>
-        <argsstring>(double r)</argsstring>
-        <name>r_to_x</name>
-        <qualifiedname>Disk2dHalo::CLog::r_to_x</qualifiedname>
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-        <type>double</type>
-        <definition>virtual double Disk2dHalo::CLog::x_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>x_to_r</name>
-        <qualifiedname>Disk2dHalo::CLog::x_to_r</qualifiedname>
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-    <detaileddescription>
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-    <inheritancegraph>
-      <node id="1">
-        <label>Disk2dHalo::CLog</label>
-        <link refid="class_disk2d_halo_1_1_c_log"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Disk2dHalo::CMap</label>
-        <link refid="class_disk2d_halo_1_1_c_map"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>Disk2dHalo::CLog</label>
-        <link refid="class_disk2d_halo_1_1_c_log"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Disk2dHalo::CMap</label>
-        <link refid="class_disk2d_halo_1_1_c_map"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" line="112" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H" bodystart="113" bodyend="118"/>
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-      <member refid="class_disk2d_halo_1_1_c_log_1a0892f08a698b3546875aea4e69ea705e" prot="public" virt="virtual"><scope>Disk2dHalo::CLog</scope><name>x_to_r</name></member>
-    </listofallmembers>
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diff --git a/doxyxml/class_disk2d_halo_1_1_c_map.xml b/doxyxml/class_disk2d_halo_1_1_c_map.xml
deleted file mode 100644
index da39f11..0000000
--- a/doxyxml/class_disk2d_halo_1_1_c_map.xml
+++ /dev/null
@@ -1,86 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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-  <compounddef id="class_disk2d_halo_1_1_c_map" kind="class" language="C++" prot="private" abstract="yes">
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-    <derivedcompoundref refid="class_disk2d_halo_1_1_c_lin" prot="public" virt="non-virtual">Disk2dHalo::CLin</derivedcompoundref>
-    <derivedcompoundref refid="class_disk2d_halo_1_1_c_log" prot="public" virt="non-virtual">Disk2dHalo::CLog</derivedcompoundref>
-    <derivedcompoundref refid="class_disk2d_halo_1_1_c_rat" prot="public" virt="non-virtual">Disk2dHalo::CRat</derivedcompoundref>
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-        <type>double</type>
-        <definition>virtual double Disk2dHalo::CMap::r_to_x</definition>
-        <argsstring>(double r)=0</argsstring>
-        <name>r_to_x</name>
-        <qualifiedname>Disk2dHalo::CMap::r_to_x</qualifiedname>
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-          <declname>r</declname>
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-        <type>double</type>
-        <definition>virtual double Disk2dHalo::CMap::x_to_r</definition>
-        <argsstring>(double x)=0</argsstring>
-        <name>x_to_r</name>
-        <qualifiedname>Disk2dHalo::CMap::x_to_r</qualifiedname>
-        <reimplementedby refid="class_disk2d_halo_1_1_c_lin_1af93436c0100ac068caabe6ecd407f8ce">x_to_r</reimplementedby>
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-        <label>Disk2dHalo::CLin</label>
-        <link refid="class_disk2d_halo_1_1_c_lin"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
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-        <label>Disk2dHalo::CLog</label>
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-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
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-        <label>Disk2dHalo::CMap</label>
-        <link refid="class_disk2d_halo_1_1_c_map"/>
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-      <node id="4">
-        <label>Disk2dHalo::CRat</label>
-        <link refid="class_disk2d_halo_1_1_c_rat"/>
-        <childnode refid="1" relation="public-inheritance">
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-      </node>
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-      <member refid="class_disk2d_halo_1_1_c_map_1ace3c3eccd3221b0517dd2eb5b8fefb0f" prot="public" virt="pure-virtual"><scope>Disk2dHalo::CMap</scope><name>x_to_r</name></member>
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diff --git a/doxyxml/class_disk2d_halo_1_1_c_rat.xml b/doxyxml/class_disk2d_halo_1_1_c_rat.xml
deleted file mode 100644
index 0e8c51b..0000000
--- a/doxyxml/class_disk2d_halo_1_1_c_rat.xml
+++ /dev/null
@@ -1,139 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk2d_halo_1_1_c_rat" kind="class" language="C++" prot="private">
-    <compoundname>Disk2dHalo::CRat</compoundname>
-    <basecompoundref refid="class_disk2d_halo_1_1_c_map" prot="public" virt="non-virtual">Disk2dHalo::CMap</basecompoundref>
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-        <definition>double Disk2dHalo::CRat::scale</definition>
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-        <name>scale</name>
-        <qualifiedname>Disk2dHalo::CRat::scale</qualifiedname>
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-        <type>double</type>
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-        <name>r_to_x</name>
-        <qualifiedname>Disk2dHalo::CRat::r_to_x</qualifiedname>
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diff --git a/doxyxml/class_disk2d_halo_1_1_gen_phi.xml b/doxyxml/class_disk2d_halo_1_1_gen_phi.xml
deleted file mode 100644
index aaf4370..0000000
--- a/doxyxml/class_disk2d_halo_1_1_gen_phi.xml
+++ /dev/null
@@ -1,265 +0,0 @@
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deleted file mode 100644
index 3679480..0000000
--- a/doxyxml/class_disk2d_halo_exception.xml
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deleted file mode 100644
index f0b5451..0000000
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-        <references refid="class_disk_eval_1a468e64722f6a660cfbee701d2d7deb4b" compoundref="_disk_eval_8_h" startline="77">ascl</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_eval_1a0a0a51858a2446b97e37a077edb26ea8" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool DiskEval::read_cache</definition>
-        <argsstring>()</argsstring>
-        <name>read_cache</name>
-        <qualifiedname>DiskEval::read_cache</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="138" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_eval_1aea106478a15d4b33c66e65a4d7b272fe" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void DiskEval::write_cache</definition>
-        <argsstring>()</argsstring>
-        <name>write_cache</name>
-        <qualifiedname>DiskEval::write_cache</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="139" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_eval_1af527e5bb033d5f040b59b43146555752" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskEval::x_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>x_to_r</name>
-        <qualifiedname>DiskEval::x_to_r</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="123" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" bodystart="123" bodyend="126"/>
-        <references refid="class_disk_eval_1a468e64722f6a660cfbee701d2d7deb4b" compoundref="_disk_eval_8_h" startline="77">ascl</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_eval_1afd9313b2e6bb8a709e56614072a31306" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskEval::Ylm</definition>
-        <argsstring>(int l, int m, double cosx)</argsstring>
-        <name>Ylm</name>
-        <qualifiedname>DiskEval::Ylm</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>cosx</declname>
-        </param>
-        <briefdescription>
-<para>Ylm evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="99" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" bodystart="99" bodyend="107"/>
-        <references refid="class_disk_eval_1ab55a4bdf8879821d2a6fd4e4b1e6761e" compoundref="_disk_eval_8_h" startline="91" endline="95">Nlm</references>
-        <references refid="_disk_eval_8_h_1aa779218c2cd573c2cb55bb571cd42329">plgndr</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_eval_1a6c804ad0c72216520e6981f04b6f39d6" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskEval::Zlm</definition>
-        <argsstring>(int l, int m, double cosx)</argsstring>
-        <name>Zlm</name>
-        <qualifiedname>DiskEval::Zlm</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>cosx</declname>
-        </param>
-        <briefdescription>
-<para>Partial derivative of Ylm in theta. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="110" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" bodystart="110" bodyend="121"/>
-        <references refid="_disk_eval_8_h_1a8ed48869a8e12ee6a57c5387755e58fa">dplgndr</references>
-        <references refid="class_disk_eval_1ab55a4bdf8879821d2a6fd4e4b1e6761e" compoundref="_disk_eval_8_h" startline="91" endline="95">Nlm</references>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_disk_eval_1a975ea4ad5d850beb4eb93b82db93dc9f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>DiskEval::DiskEval</definition>
-        <argsstring>(EmpCylSL::AxiDiskPtr model, double rmin, double rmax, double ascl, int lmax, int numr, int nint, bool progress=true, int mmax=1, int nump=1, bool cache=true)</argsstring>
-        <name>DiskEval</name>
-        <qualifiedname>DiskEval::DiskEval</qualifiedname>
-        <param>
-          <type><ref refid="class_emp_cyl_s_l_1a686c18b7deb23a96b0608d96a7d13164" kindref="member">EmpCylSL::AxiDiskPtr</ref></type>
-          <declname>model</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ascl</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nint</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>progress</declname>
-          <defval>true</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-          <defval>1</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nump</declname>
-          <defval>1</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>cache</declname>
-          <defval>true</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="146" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_eval_1ab44b19c6418969bc1555ce63b74a1cea" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::tuple&lt; double, double, double, double &gt;</type>
-        <definition>std::tuple&lt; double, double, double, double &gt; DiskEval::operator()</definition>
-        <argsstring>(double R, double z, double phi=0)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>DiskEval::operator()</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-<para>Evaluation where the return tuple is potential, dPhi/dR, dPhi/dz, dPhi/dphi. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="150" column="14"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Compute the axisymmetric force of a three-dimensional disk density using the multipole expansion</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>model</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the target model for potential computation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum radius for potential evaluation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radius for potential evaluation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ascl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale radius for maping r to the unit interval. This is only used if ascl&gt;0, otherwise it is linear if rmin=0 or logarithmic if rmin&gt;0. </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum order of the spherical harmonics </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of grid points in the radial table </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of quadrature knots for the x=cos(theta) integral @parm progress set to true prints a progress bar</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-<simplesect kind="note"><para>{Mathematics}</para>
-</simplesect>
-Using the standard multipole formula  <formula id="97">\[
-\Phi(\mathbf{r}) = -4\pi G \sum_{lm} Y_{lm}(\mathbf{\Omega})
-\left[
-\frac{1}{r^{l+1}}\int_0^r da a^{l+2}\rho_{lm}(a) +
-r^l\int_r^{\infty} da \frac{\rho_{lm}(a)}{a^{l-1}}
-\right]
-\]</formula> where  <formula id="98">\[
-\rho_{lm} = \int d\mathbf{\Omega}Y_{lm}(\mathbf{\Omega}) \rho(\mathbf{r}).
-\]</formula></para>
-<para>The forces follow by analytic differentiation. Specifically, the forces follows by differentiation of <formula id="85">$\Phi(\mathbf{r})$</formula> with respect to <formula id="86">$r$</formula> and <formula id="87">$\theta$</formula> where:  <formula id="99">\[
-F_R = -\frac{\partial\Phi}{\partial r} \frac{R}{r} - 
-\frac{\partial\Phi}{\partial\theta} \frac{z}{r^2}
-\]</formula> and  <formula id="100">\[
-F_z = -\frac{\partial\Phi}{\partial r} \frac{z}{r} +
-\frac{\partial\Phi}{\partial\theta} \frac{R}{r^2}
-\]</formula> </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" line="73" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H" bodystart="74" bodyend="152"/>
-    <listofallmembers>
-      <member refid="class_disk_eval_1a468e64722f6a660cfbee701d2d7deb4b" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>ascl</name></member>
-      <member refid="class_disk_eval_1ad9c11dc30d6bbf9c7466e758e5365394" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>cachefile</name></member>
-      <member refid="class_disk_eval_1a975ea4ad5d850beb4eb93b82db93dc9f" prot="public" virt="non-virtual"><scope>DiskEval</scope><name>DiskEval</name></member>
-      <member refid="class_disk_eval_1ae661096778110e8d4c90fdad7e8d0130" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>dr_to_dx</name></member>
-      <member refid="class_disk_eval_1aa7d9f20640072144f3ccbe2793127a8c" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>dx</name></member>
-      <member refid="class_disk_eval_1a1c00adcc1cdda792a4a77dca8fe5e274" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>hmagic</name></member>
-      <member refid="class_disk_eval_1a07a14f99df80b07aca77ef70cb362a15" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>lmax</name></member>
-      <member refid="class_disk_eval_1a4d7b296868f95b0c7008cbde2779ba25" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>logr</name></member>
-      <member refid="class_disk_eval_1a3ffe9dfcbe9afcc38ce44d6844d2067d" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>model</name></member>
-      <member refid="class_disk_eval_1ab55a4bdf8879821d2a6fd4e4b1e6761e" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>Nlm</name></member>
-      <member refid="class_disk_eval_1a17099b805a674d5327d11a93b8ee7487" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>numr</name></member>
-      <member refid="class_disk_eval_1ab44b19c6418969bc1555ce63b74a1cea" prot="public" virt="non-virtual"><scope>DiskEval</scope><name>operator()</name></member>
-      <member refid="class_disk_eval_1a65550808b09515ef148580f1fb1af8e5" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>r_to_x</name></member>
-      <member refid="class_disk_eval_1a0a0a51858a2446b97e37a077edb26ea8" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>read_cache</name></member>
-      <member refid="class_disk_eval_1a6478dc29d714013eb6ae122dd5d2f725" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>rho</name></member>
-      <member refid="class_disk_eval_1ad9a6d11cf445bc90b38854568c1d0e56" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>T1</name></member>
-      <member refid="class_disk_eval_1ab0ae8955161880282a16bf606ad9c363" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>T2</name></member>
-      <member refid="class_disk_eval_1aea106478a15d4b33c66e65a4d7b272fe" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>write_cache</name></member>
-      <member refid="class_disk_eval_1af527e5bb033d5f040b59b43146555752" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>x_to_r</name></member>
-      <member refid="class_disk_eval_1a50f747dbf3e409c37c424ec15fe7b060" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>xmax</name></member>
-      <member refid="class_disk_eval_1a1f0cd262d36bc29dde3e42efc1f471d8" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>xmin</name></member>
-      <member refid="class_disk_eval_1a2371913d523ac9a51d9a66bdbf677566" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>xscl</name></member>
-      <member refid="class_disk_eval_1afd9313b2e6bb8a709e56614072a31306" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>Ylm</name></member>
-      <member refid="class_disk_eval_1a6c804ad0c72216520e6981f04b6f39d6" prot="private" virt="non-virtual"><scope>DiskEval</scope><name>Zlm</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_disk_halo.xml b/doxyxml/class_disk_halo.xml
deleted file mode 100644
index f839340..0000000
--- a/doxyxml/class_disk_halo.xml
+++ /dev/null
@@ -1,2485 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk_halo" kind="class" language="C++" prot="public">
-    <compoundname>DiskHalo</compoundname>
-    <includes refid="_disk_halo_8_h" local="no">DiskHalo.H</includes>
-    <innerclass refid="class_disk_halo_1_1_c_lin" prot="private">DiskHalo::CLin</innerclass>
-    <innerclass refid="class_disk_halo_1_1_c_log" prot="private">DiskHalo::CLog</innerclass>
-    <innerclass refid="class_disk_halo_1_1_c_map" prot="private">DiskHalo::CMap</innerclass>
-    <innerclass refid="class_disk_halo_1_1_c_rat" prot="private">DiskHalo::CRat</innerclass>
-    <sectiondef kind="public-type">
-      <memberdef kind="enum" id="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" prot="public" static="no" strong="no">
-        <type></type>
-        <name>DiskGenType</name>
-        <qualifiedname>DiskHalo::DiskGenType</qualifiedname>
-        <enumvalue id="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7a2a6906e3e4918fc61c5e41c89e36ddba" prot="public">
-          <name>Jeans</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7af632b5b63f510e67172781e47c4618df" prot="public">
-          <name>Asymmetric</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7aace54a716c027b1d32476c5cd00f2130" prot="public">
-          <name>Epicyclic</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="156" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="156" bodyend="156"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_disk_halo_1a90f39248f69d3ff532b0c432d6761d19" prot="private" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd DiskHalo::asytable</definition>
-        <argsstring></argsstring>
-        <name>asytable</name>
-        <qualifiedname>DiskHalo::asytable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="51" column="37" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="51" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1a6666c43554db850822dc97e073aa3f31" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int DiskHalo::bufcnt</definition>
-        <argsstring></argsstring>
-        <name>bufcnt</name>
-        <qualifiedname>DiskHalo::bufcnt</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="67" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="67" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1a3c56b44538cdd18eb93d2139d58fed31" prot="private" static="no" mutable="no">
-        <type>std::ostringstream</type>
-        <definition>std::ostringstream DiskHalo::bufout</definition>
-        <argsstring></argsstring>
-        <name>bufout</name>
-        <qualifiedname>DiskHalo::bufout</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="68" column="22" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="68" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1ac8711d9a0d117730c0f4e514cae02c0c" prot="private" static="no" mutable="no">
-        <type>const int</type>
-        <definition>const int DiskHalo::bunchcnt</definition>
-        <argsstring></argsstring>
-        <name>bunchcnt</name>
-        <qualifiedname>DiskHalo::bunchcnt</qualifiedname>
-        <initializer>= 16384</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="66" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="66" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1ae21e949ca3cb96f7be9be2321cd25698" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::center_pos[3]</definition>
-        <argsstring>[3]</argsstring>
-        <name>center_pos</name>
-        <qualifiedname>DiskHalo::center_pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <definition>double DiskHalo::center_vel[3]</definition>
-        <argsstring>[3]</argsstring>
-        <name>center_vel</name>
-        <qualifiedname>DiskHalo::center_vel</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <type>std::shared_ptr&lt; <ref refid="class_disk_halo_1_1_c_map" kindref="compound">CMap</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;CMap&gt; DiskHalo::cmap</definition>
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-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <type>bool</type>
-        <definition>bool DiskHalo::com</definition>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="63" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="63" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1aaaab422ba80a90be3ccef7167b0d1512" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool DiskHalo::cov</definition>
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-        <qualifiedname>DiskHalo::cov</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="64" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="64" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a22f7a1282b13fd66403eb2033e7e013b" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::dc</definition>
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-        <name>dc</name>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="55" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="55" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool DiskHalo::DF</definition>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="61" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="61" bodyend="-1"/>
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-        <type>std::shared_ptr&lt; <ref refid="class_exponential_disk" kindref="compound">ExponentialDisk</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;ExponentialDisk&gt; DiskHalo::disk</definition>
-        <argsstring></argsstring>
-        <name>disk</name>
-        <qualifiedname>DiskHalo::disk</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="43" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="43" bodyend="-1"/>
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-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; DiskHalo::disktableN</definition>
-        <argsstring></argsstring>
-        <name>disktableN</name>
-        <qualifiedname>DiskHalo::disktableN</qualifiedname>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="50" column="26" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="50" bodyend="-1"/>
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-        <definition>std::vector&lt;Eigen::MatrixXd&gt; DiskHalo::disktableP</definition>
-        <argsstring></argsstring>
-        <name>disktableP</name>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="50" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="50" bodyend="-1"/>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="44" column="34" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="44" bodyend="-1"/>
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-        <name>dP</name>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="52" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="52" bodyend="-1"/>
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-        <definition>double DiskHalo::dR</definition>
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-        <name>dR</name>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="52" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="52" bodyend="-1"/>
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-        <name>dr</name>
-        <qualifiedname>DiskHalo::dr</qualifiedname>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="55" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="55" bodyend="-1"/>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="88" column="22" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="88" bodyend="-1"/>
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-        <type>Eigen::MatrixXd</type>
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-        <name>dv2table</name>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="51" column="28" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="51" bodyend="-1"/>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="52" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="52" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>expandd</name>
-        <qualifiedname>DiskHalo::expandd</qualifiedname>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1a1e59a2417dd9dbc4b78fca23e22268a0" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_add_disk" kindref="compound">AddDisk</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;AddDisk&gt; DiskHalo::newmod</definition>
-        <argsstring></argsstring>
-        <name>newmod</name>
-        <qualifiedname>DiskHalo::newmod</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="39" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="39" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1ae1a319cf23af0b120b1508850a717d3e" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; DiskHalo::nhD</definition>
-        <argsstring></argsstring>
-        <name>nhD</name>
-        <qualifiedname>DiskHalo::nhD</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="89" column="12" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="89" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1ad31198223e22185cde029eee0502f487" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; DiskHalo::nhM</definition>
-        <argsstring></argsstring>
-        <name>nhM</name>
-        <qualifiedname>DiskHalo::nhM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="90" column="12" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="90" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a0dba7f3b5c4d71719112a01e5aa1e9a5" prot="private" static="no" mutable="no">
-        <type>vector&lt; unsigned &gt;</type>
-        <definition>vector&lt;unsigned&gt; DiskHalo::nhN</definition>
-        <argsstring></argsstring>
-        <name>nhN</name>
-        <qualifiedname>DiskHalo::nhN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="91" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="91" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a233f9e7203da7d352b7f3cd8728250b4" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int DiskHalo::nzepi</definition>
-        <argsstring></argsstring>
-        <name>nzepi</name>
-        <qualifiedname>DiskHalo::nzepi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="93" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="93" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1a326d640335349492c6715d905c52ad33" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int DiskHalo::nzero</definition>
-        <argsstring></argsstring>
-        <name>nzero</name>
-        <qualifiedname>DiskHalo::nzero</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="92" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="92" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1a31a1d7fc5315f52d461c4dc3740f8c26" prot="private" static="no" mutable="no">
-        <type>std::normal_distribution</type>
-        <definition>std::normal_distribution DiskHalo::rndN</definition>
-        <argsstring></argsstring>
-        <name>rndN</name>
-        <qualifiedname>DiskHalo::rndN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="59" column="4" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="59" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1acdd928e74da4cd3617c51dcf56cb071f" prot="private" static="no" mutable="no">
-        <type>std::uniform_real_distribution</type>
-        <definition>std::uniform_real_distribution DiskHalo::rndU</definition>
-        <argsstring></argsstring>
-        <name>rndU</name>
-        <qualifiedname>DiskHalo::rndU</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="58" column="4" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="58" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1a60b7e2735f74d6a2a877962f308f18b9" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::scaleheight</definition>
-        <argsstring></argsstring>
-        <name>scaleheight</name>
-        <qualifiedname>DiskHalo::scaleheight</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="44" column="22" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1a0d93aba88b6ef036ab1ca7b917c05b19" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::scalelength</definition>
-        <argsstring></argsstring>
-        <name>scalelength</name>
-        <qualifiedname>DiskHalo::scalelength</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="44" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1ab0b1521e2f5315db64b686b016421577" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::sigma0</definition>
-        <argsstring></argsstring>
-        <name>sigma0</name>
-        <qualifiedname>DiskHalo::sigma0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="52" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="52" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1ab9fee88921608c7d1d488202a4302cab" prot="private" static="no" mutable="no">
-        <type><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" kindref="member">DiskGenType</ref></type>
-        <definition>DiskGenType DiskHalo::type</definition>
-        <argsstring></argsstring>
-        <name>type</name>
-        <qualifiedname>DiskHalo::type</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="341" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="341" bodyend="-1"/>
-        <referencedby refid="class_disk_halo_1aae39db932a59fb46a79098cf97f06ae8" compoundref="_disk_halo_8_h" startline="140" endline="152">make_cmap</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_halo_1af99610b708fde8e1340d44090ed5ee00" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::Xmax</definition>
-        <argsstring></argsstring>
-        <name>Xmax</name>
-        <qualifiedname>DiskHalo::Xmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="137" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="137" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a16b32dac2df1eb3083f98bbfcbaf364b" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::Xmin</definition>
-        <argsstring></argsstring>
-        <name>Xmin</name>
-        <qualifiedname>DiskHalo::Xmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="137" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="137" bodyend="-1"/>
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-        <type>const unsigned</type>
-        <definition>const unsigned DiskHalo::mh</definition>
-        <argsstring></argsstring>
-        <name>mh</name>
-        <qualifiedname>DiskHalo::mh</qualifiedname>
-        <initializer>= 5</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="86" column="25" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="86" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a10f803fe9e4b89fdbf0da2b182943a1d" prot="private" static="yes" mutable="no">
-        <type>const unsigned</type>
-        <definition>const unsigned DiskHalo::nh</definition>
-        <argsstring></argsstring>
-        <name>nh</name>
-        <qualifiedname>DiskHalo::nh</qualifiedname>
-        <initializer>= 50</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="84" column="25" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="84" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a3f01d08f0f3793460399bbc5ffbcd097" prot="private" static="yes" mutable="no">
-        <type>const int</type>
-        <definition>const int DiskHalo::use_spline</definition>
-        <argsstring></argsstring>
-        <name>use_spline</name>
-        <qualifiedname>DiskHalo::use_spline</qualifiedname>
-        <initializer>= 0</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="97" column="20" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="97" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool DiskHalo::ALLOW</definition>
-        <argsstring></argsstring>
-        <name>ALLOW</name>
-        <qualifiedname>DiskHalo::ALLOW</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="213" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="213" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1aa5023c6dd6094e4d1d543ea7608f3290" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool DiskHalo::CHEBY</definition>
-        <argsstring></argsstring>
-        <name>CHEBY</name>
-        <qualifiedname>DiskHalo::CHEBY</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="209" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="209" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a8bd0ecc3f059aa56b28959ba7efbf97b" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::COMPRESSION</definition>
-        <argsstring></argsstring>
-        <name>COMPRESSION</name>
-        <qualifiedname>DiskHalo::COMPRESSION</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="182" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="182" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a6754a3982cb7404c4b64dbcf2d640f36" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double DiskHalo::DR_DF</definition>
-        <argsstring></argsstring>
-        <name>DR_DF</name>
-        <qualifiedname>DiskHalo::DR_DF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="202" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="202" bodyend="-1"/>
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-        <type>std::map&lt; std::string, <ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" kindref="member">DiskGenType</ref> &gt;</type>
-        <definition>std::map&lt;std::string, DiskGenType&gt; DiskHalo::getDiskGenType</definition>
-        <argsstring></argsstring>
-        <name>getDiskGenType</name>
-        <qualifiedname>DiskHalo::getDiskGenType</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="157" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="157" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int DiskHalo::ITMAX</definition>
-        <argsstring></argsstring>
-        <name>ITMAX</name>
-        <qualifiedname>DiskHalo::ITMAX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="219" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="219" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool DiskHalo::LOGR</definition>
-        <argsstring></argsstring>
-        <name>LOGR</name>
-        <qualifiedname>DiskHalo::LOGR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="207" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="207" bodyend="-1"/>
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-        <type>unsigned</type>
-        <definition>unsigned DiskHalo::NBUF</definition>
-        <argsstring></argsstring>
-        <name>NBUF</name>
-        <qualifiedname>DiskHalo::NBUF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="204" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="204" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int DiskHalo::NCHEB</definition>
-        <argsstring></argsstring>
-        <name>NCHEB</name>
-        <qualifiedname>DiskHalo::NCHEB</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="211" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="211" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a21826d2c3b8d4ff91a56851a13171d1a" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int DiskHalo::NDP</definition>
-        <argsstring></argsstring>
-        <name>NDP</name>
-        <qualifiedname>DiskHalo::NDP</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="159" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="159" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a6a2ee5d3f22c6b820b24dfc97ac557a1" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int DiskHalo::NDR</definition>
-        <argsstring></argsstring>
-        <name>NDR</name>
-        <qualifiedname>DiskHalo::NDR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="165" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="165" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_disk_halo_1a3868ea2cb616fea090307cb94e87c126" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int DiskHalo::NDZ</definition>
-        <argsstring></argsstring>
-        <name>NDZ</name>
-        <qualifiedname>DiskHalo::NDZ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="162" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="162" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int DiskHalo::NHR</definition>
-        <argsstring></argsstring>
-        <name>NHR</name>
-        <qualifiedname>DiskHalo::NHR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="168" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="168" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>NHT</name>
-        <qualifiedname>DiskHalo::NHT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>int</type>
-        <definition>int DiskHalo::NUMDF</definition>
-        <argsstring></argsstring>
-        <name>NUMDF</name>
-        <qualifiedname>DiskHalo::NUMDF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <definition>double DiskHalo::Q</definition>
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-        <name>Q</name>
-        <qualifiedname>DiskHalo::Q</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="191" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="191" bodyend="-1"/>
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-        <name>R_DF</name>
-        <qualifiedname>DiskHalo::R_DF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="201" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="201" bodyend="-1"/>
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-        <definition>double DiskHalo::RA</definition>
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-        <name>RA</name>
-        <qualifiedname>DiskHalo::RA</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="224" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="224" bodyend="-1"/>
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-        <definition>double DiskHalo::RDMAX</definition>
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-        <name>RDMAX</name>
-        <qualifiedname>DiskHalo::RDMAX</qualifiedname>
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-        </briefdescription>
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-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="180" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="180" bodyend="-1"/>
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-        <definition>double DiskHalo::RDMIN</definition>
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-        <name>RDMIN</name>
-        <qualifiedname>DiskHalo::RDMIN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="178" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="178" bodyend="-1"/>
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-        <definition>double DiskHalo::RHMAX</definition>
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-        <name>RHMAX</name>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="176" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="176" bodyend="-1"/>
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-        <definition>double DiskHalo::RHMIN</definition>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="174" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="174" bodyend="-1"/>
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-        <name>RNUM</name>
-        <qualifiedname>DiskHalo::RNUM</qualifiedname>
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-        <definition>string DiskHalo::RUNTAG</definition>
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-        <name>RUNTAG</name>
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-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <name>SEED</name>
-        <qualifiedname>DiskHalo::SEED</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="216" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="216" bodyend="-1"/>
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-        <name>SHFACTOR</name>
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-        <briefdescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="185" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="185" bodyend="-1"/>
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-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="296" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a05ee53071936efdda61ae178b4c91013" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskHalo::deri_pot_halo</definition>
-        <argsstring>(double xp, double yp, double zp, int n)</argsstring>
-        <name>deri_pot_halo</name>
-        <qualifiedname>DiskHalo::deri_pot_halo</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="298" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a04db80770e471ab63ffc87179afa81e0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void DiskHalo::disk_eval</definition>
-        <argsstring>(double R, double z, double phi, double &amp;p, double &amp;fr, double &amp;fz, double &amp;fp)</argsstring>
-        <name>disk_eval</name>
-        <qualifiedname>DiskHalo::disk_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fz</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="300" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a97d2c89cc3f75574e52b5ce67983c9eb" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void DiskHalo::disk_model</definition>
-        <argsstring>(const std::string &amp;modfile)</argsstring>
-        <name>disk_model</name>
-        <qualifiedname>DiskHalo::disk_model</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>modfile</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="338" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a967ed5b5eb61f41c80a495c347d4d825" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>DiskHalo::DiskHalo</definition>
-        <argsstring>()</argsstring>
-        <name>DiskHalo</name>
-        <qualifiedname>DiskHalo::DiskHalo</qualifiedname>
-        <briefdescription>
-<para>Dummy Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="244" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1ac66b266a337d735c5f274c7ce690b427" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>DiskHalo::DiskHalo</definition>
-        <argsstring>(const DiskHalo &amp;)</argsstring>
-        <name>DiskHalo</name>
-        <qualifiedname>DiskHalo::DiskHalo</qualifiedname>
-        <param>
-          <type>const <ref refid="class_disk_halo" kindref="compound">DiskHalo</ref> &amp;</type>
-        </param>
-        <briefdescription>
-<para>Copy constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="260" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a08890e60645b6ac133b892e5e9cae817" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>DiskHalo::DiskHalo</definition>
-        <argsstring>(SphericalSLptr expandh, EmpCylSLptr expandd, double H, double A, double DMass, std::string maptype, string &amp;filename, int DF=0, int DIVERGE=0, double DIVERGE_RFAC=1.0, DiskGenType type=Asymmetric)</argsstring>
-        <name>DiskHalo</name>
-        <qualifiedname>DiskHalo::DiskHalo</qualifiedname>
-        <param>
-          <type><ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref></type>
-          <declname>expandh</declname>
-        </param>
-        <param>
-          <type><ref refid="_emp_cyl_s_l_8_h_1aa0ef74652fa64c2615c9ff54a5d9e8e2" kindref="member">EmpCylSLptr</ref></type>
-          <declname>expandd</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>H</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>A</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>DMass</declname>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>maptype</declname>
-        </param>
-        <param>
-          <type>string &amp;</type>
-          <declname>filename</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>DF</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>DIVERGE</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>DIVERGE_RFAC</declname>
-          <defval>1.0</defval>
-        </param>
-        <param>
-          <type><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" kindref="member">DiskGenType</ref></type>
-          <declname>type</declname>
-          <defval><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7af632b5b63f510e67172781e47c4618df" kindref="member">Asymmetric</ref></defval>
-        </param>
-        <briefdescription>
-<para>Constructor: equal mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="247" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a2914cb9f30e78d32db7bda12290b5f15" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>DiskHalo::DiskHalo</definition>
-        <argsstring>(SphericalSLptr haloexp, EmpCylSLptr diskexp, double H, double A, double DMass, std::string maptype, string &amp;filename1, int DIVERGE, double DIVERGE_RFAC, string &amp;filename2, int DIVERGE2, double DIVERGE_RFAC2, DiskGenType type=Asymmetric)</argsstring>
-        <name>DiskHalo</name>
-        <qualifiedname>DiskHalo::DiskHalo</qualifiedname>
-        <param>
-          <type><ref refid="_spherical_s_l_8_h_1a14dbfa24326bd24607c4a8f13b181fe5" kindref="member">SphericalSLptr</ref></type>
-          <declname>haloexp</declname>
-        </param>
-        <param>
-          <type><ref refid="_emp_cyl_s_l_8_h_1aa0ef74652fa64c2615c9ff54a5d9e8e2" kindref="member">EmpCylSLptr</ref></type>
-          <declname>diskexp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>H</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>A</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>DMass</declname>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>maptype</declname>
-        </param>
-        <param>
-          <type>string &amp;</type>
-          <declname>filename1</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>DIVERGE</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>DIVERGE_RFAC</declname>
-        </param>
-        <param>
-          <type>string &amp;</type>
-          <declname>filename2</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>DIVERGE2</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>DIVERGE_RFAC2</declname>
-        </param>
-        <param>
-          <type><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7" kindref="member">DiskGenType</ref></type>
-          <declname>type</declname>
-          <defval><ref refid="class_disk_halo_1ac427edb5013419bc746bc425e7a536b7af632b5b63f510e67172781e47c4618df" kindref="member">Asymmetric</ref></defval>
-        </param>
-        <briefdescription>
-<para>Constructor: multi mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="253" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a6b0c9e2c209e56d0eea28b5fca203e8f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskHalo::epi</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>epi</name>
-        <qualifiedname>DiskHalo::epi</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="303" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1aa6dfeb288029b4390db309ebee76285b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskHalo::get_ddpot</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>get_ddpot</name>
-        <qualifiedname>DiskHalo::get_ddpot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="292" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a174215c0e2148caf208ac7e4ba3e4928" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskHalo::get_disp</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>get_disp</name>
-        <qualifiedname>DiskHalo::get_disp</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="321" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a1063e3162c7a27ae25ec238a2508c1de" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskHalo::get_dpot</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>get_dpot</name>
-        <qualifiedname>DiskHalo::get_dpot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="288" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a2b3057d43acae935b50088810227480c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskHalo::get_hdpot</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>get_hdpot</name>
-        <qualifiedname>DiskHalo::get_hdpot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="290" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a2b2adba7a7e57d38db73274770fc9c59" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double DiskHalo::get_hpot</definition>
-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>get_hpot</name>
-        <qualifiedname>DiskHalo::get_hpot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>xp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>yp</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="286" column="10"/>
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-      <memberdef kind="function" id="class_disk_halo_1a6cb42802fb69e0381c8d9476add9ba80" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void DiskHalo::profile</definition>
-        <argsstring>(std::ostream &amp;rotfile, vector&lt; Particle &gt; &amp;dpart, double rmin, double rmax, int numr)</argsstring>
-        <name>profile</name>
-        <qualifiedname>DiskHalo::profile</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>rotfile</declname>
-        </param>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>dpart</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="335" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a4a283558b830368a20ea38c1baf56ae8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void DiskHalo::set_disk_coordinates</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;pdisk, int ndisk, int npart)</argsstring>
-        <name>set_disk_coordinates</name>
-        <qualifiedname>DiskHalo::set_disk_coordinates</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>pdisk</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ndisk</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>npart</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="267" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a31f4c09a27f2611a64d0cc35fb52a274" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void DiskHalo::set_halo</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;phalo, int nhalo, int npart)</argsstring>
-        <name>set_halo</name>
-        <qualifiedname>DiskHalo::set_halo</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>phalo</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nhalo</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>npart</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="265" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_halo_1a89e916e7288b0eb9602d29947a32f3d5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void DiskHalo::set_halo_coordinates</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;phalo, int nhalo, int npart)</argsstring>
-        <name>set_halo_coordinates</name>
-        <qualifiedname>DiskHalo::set_halo_coordinates</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>phalo</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nhalo</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>npart</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="266" column="8"/>
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-      <memberdef kind="function" id="class_disk_halo_1a528b2213397b8176ae83783ab6fe3655" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void DiskHalo::set_halo_table_multi</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;phalo)</argsstring>
-        <name>set_halo_table_multi</name>
-        <qualifiedname>DiskHalo::set_halo_table_multi</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>phalo</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <type>void</type>
-        <definition>void DiskHalo::set_halo_table_single</definition>
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-        <name>set_halo_table_single</name>
-        <qualifiedname>DiskHalo::set_halo_table_single</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>phalo</declname>
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-        <briefdescription>
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-        <type>void</type>
-        <definition>void DiskHalo::set_pos_origin</definition>
-        <argsstring>(double &amp;x, double &amp;y, double &amp;z)</argsstring>
-        <name>set_pos_origin</name>
-        <qualifiedname>DiskHalo::set_pos_origin</qualifiedname>
-        <param>
-          <type>double &amp;</type>
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-        <param>
-          <type>double &amp;</type>
-          <declname>y</declname>
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-        <param>
-          <type>double &amp;</type>
-          <declname>z</declname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <references refid="class_disk_halo_1ae21e949ca3cb96f7be9be2321cd25698" compoundref="_disk_halo_8_h" startline="45">center_pos</references>
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-        <type>void</type>
-        <definition>void DiskHalo::set_vel_disk</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;part)</argsstring>
-        <name>set_vel_disk</name>
-        <qualifiedname>DiskHalo::set_vel_disk</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>part</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>void</type>
-        <definition>void DiskHalo::set_vel_halo</definition>
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-        <name>set_vel_halo</name>
-        <qualifiedname>DiskHalo::set_vel_halo</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
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-        <detaileddescription>
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-        <type>void</type>
-        <definition>void DiskHalo::set_vel_origin</definition>
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-        <name>set_vel_origin</name>
-        <qualifiedname>DiskHalo::set_vel_origin</qualifiedname>
-        <param>
-          <type>double &amp;</type>
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-        </param>
-        <param>
-          <type>double &amp;</type>
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-        <param>
-          <type>double &amp;</type>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <references refid="class_disk_halo_1a07ef76d6c4dac9992219acb4d68d8ebe" compoundref="_disk_halo_8_h" startline="45">center_vel</references>
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-        <type>void</type>
-        <definition>void DiskHalo::table_disk</definition>
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-        <name>table_disk</name>
-        <qualifiedname>DiskHalo::table_disk</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
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-        <briefdescription>
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-        <detaileddescription>
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-        <type>void</type>
-        <definition>void DiskHalo::table_halo</definition>
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-        <name>table_halo</name>
-        <qualifiedname>DiskHalo::table_halo</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
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-        <argsstring>(double xp, double yp, double zp)</argsstring>
-        <name>v_circ</name>
-        <qualifiedname>DiskHalo::v_circ</qualifiedname>
-        <param>
-          <type>double</type>
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-        </param>
-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void DiskHalo::virial_ratio</definition>
-        <argsstring>(const char *, const char *)</argsstring>
-        <name>virial_ratio</name>
-        <qualifiedname>DiskHalo::virial_ratio</qualifiedname>
-        <param>
-          <type>const char *</type>
-        </param>
-        <param>
-          <type>const char *</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void DiskHalo::virial_ratio</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;hpart, vector&lt; Particle &gt; &amp;dpart)</argsstring>
-        <name>virial_ratio</name>
-        <qualifiedname>DiskHalo::virial_ratio</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>hpart</declname>
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-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>dpart</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        <type>double</type>
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-        <name>vp_disp2</name>
-        <qualifiedname>DiskHalo::vp_disp2</qualifiedname>
-        <param>
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-        <param>
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-        <param>
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-        <type>double</type>
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-        <name>vr_disp2</name>
-        <qualifiedname>DiskHalo::vr_disp2</qualifiedname>
-        <param>
-          <type>double</type>
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-        <param>
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-        <param>
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-        <param>
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-</doxygen>
diff --git a/doxyxml/class_disk_halo_1_1_c_lin.xml b/doxyxml/class_disk_halo_1_1_c_lin.xml
deleted file mode 100644
index f561beb..0000000
--- a/doxyxml/class_disk_halo_1_1_c_lin.xml
+++ /dev/null
@@ -1,80 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk_halo_1_1_c_lin" kind="class" language="C++" prot="private">
-    <compoundname>DiskHalo::CLin</compoundname>
-    <basecompoundref refid="class_disk_halo_1_1_c_map" prot="public" virt="non-virtual">DiskHalo::CMap</basecompoundref>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_disk_halo_1_1_c_lin_1aec200dc55db3f7d8c9daa70350f8ac0c" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double DiskHalo::CLin::r_to_x</definition>
-        <argsstring>(double r)</argsstring>
-        <name>r_to_x</name>
-        <qualifiedname>DiskHalo::CLin::r_to_x</qualifiedname>
-        <reimplements refid="class_disk_halo_1_1_c_map_1ad1b12dd747f576457c99a5b8bc15b7dc">r_to_x</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="111" column="20" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="111" bodyend="111"/>
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-        <type>double</type>
-        <definition>virtual double DiskHalo::CLin::x_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>x_to_r</name>
-        <qualifiedname>DiskHalo::CLin::x_to_r</qualifiedname>
-        <reimplements refid="class_disk_halo_1_1_c_map_1a4cb11ff9d639153146a10c93ea800bc6">x_to_r</reimplements>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="110" column="20" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="110" bodyend="110"/>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
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-        <label>DiskHalo::CLin</label>
-        <link refid="class_disk_halo_1_1_c_lin"/>
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diff --git a/doxyxml/class_disk_halo_1_1_c_log.xml b/doxyxml/class_disk_halo_1_1_c_log.xml
deleted file mode 100644
index f624c14..0000000
--- a/doxyxml/class_disk_halo_1_1_c_log.xml
+++ /dev/null
@@ -1,80 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk_halo_1_1_c_log" kind="class" language="C++" prot="private">
-    <compoundname>DiskHalo::CLog</compoundname>
-    <basecompoundref refid="class_disk_halo_1_1_c_map" prot="public" virt="non-virtual">DiskHalo::CMap</basecompoundref>
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-        <type>double</type>
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-        <name>r_to_x</name>
-        <qualifiedname>DiskHalo::CLog::r_to_x</qualifiedname>
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-        <type>double</type>
-        <definition>virtual double DiskHalo::CLog::x_to_r</definition>
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-        <name>x_to_r</name>
-        <qualifiedname>DiskHalo::CLog::x_to_r</qualifiedname>
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diff --git a/doxyxml/class_disk_halo_1_1_c_map.xml b/doxyxml/class_disk_halo_1_1_c_map.xml
deleted file mode 100644
index 9691e49..0000000
--- a/doxyxml/class_disk_halo_1_1_c_map.xml
+++ /dev/null
@@ -1,86 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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diff --git a/doxyxml/class_disk_halo_1_1_c_rat.xml b/doxyxml/class_disk_halo_1_1_c_rat.xml
deleted file mode 100644
index 09a537f..0000000
--- a/doxyxml/class_disk_halo_1_1_c_rat.xml
+++ /dev/null
@@ -1,139 +0,0 @@
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-        <qualifiedname>DiskHalo::CRat::CRat</qualifiedname>
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-        <type>double</type>
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-        <name>x_to_r</name>
-        <qualifiedname>DiskHalo::CRat::x_to_r</qualifiedname>
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-        <references refid="class_disk_halo_1_1_c_rat_1a07e44965f926604b3ded4aba5949f638" compoundref="_disk_halo_8_h" startline="125">scale</references>
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diff --git a/doxyxml/class_disk_halo_exception.xml b/doxyxml/class_disk_halo_exception.xml
deleted file mode 100644
index 6063d0a..0000000
--- a/doxyxml/class_disk_halo_exception.xml
+++ /dev/null
@@ -1,66 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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-      <node id="1">
-        <label>DiskHaloException</label>
-        <link refid="class_disk_halo_exception"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>std::runtime_error</label>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>DiskHaloException</label>
-        <link refid="class_disk_halo_exception"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>std::runtime_error</label>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" line="23" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H" bodystart="24" bodyend="34"/>
-    <listofallmembers>
-      <member refid="class_disk_halo_exception_1ac8dfd37ff38e420395484b1de34c8055" prot="public" virt="non-virtual"><scope>DiskHaloException</scope><name>DiskHaloException</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_disk_with_halo.xml b/doxyxml/class_disk_with_halo.xml
deleted file mode 100644
index ecc6639..0000000
--- a/doxyxml/class_disk_with_halo.xml
+++ /dev/null
@@ -1,625 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_disk_with_halo" kind="class" language="C++" prot="public">
-    <compoundname>DiskWithHalo</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
-    <includes refid="_disk_with_halo_8_h" local="no">DiskWithHalo.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;AxiSymModel&gt; DiskWithHalo::d</definition>
-        <argsstring></argsstring>
-        <name>d</name>
-        <qualifiedname>DiskWithHalo::d</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="14" column="19" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="14" bodyend="-1"/>
-        <referencedby refid="class_disk_with_halo_1acd9e6c29b53f51e98397c52978c66241" compoundref="_disk_with_halo_8_h" startline="33" endline="40">DiskWithHalo</referencedby>
-        <referencedby refid="class_disk_with_halo_1af7007bf28863d9a11dab396ba123c1d5" compoundref="_disk_with_halo_8_h" startline="23" endline="30">DiskWithHalo</referencedby>
-        <referencedby refid="class_disk_with_halo_1a90dc033f414be9f3c41ee0c0fad633bc" compoundref="_disk_with_halo_8_h" startline="47" endline="48">get_density</referencedby>
-        <referencedby refid="class_disk_with_halo_1a298f24fcd27cf5f837c18e52eafdc106" compoundref="_disk_with_halo_8_h" startline="54" endline="55">get_dpot</referencedby>
-        <referencedby refid="class_disk_with_halo_1a83af39a3f1f0eaaae16e9d6a54e57de3" compoundref="_disk_with_halo_8_h" startline="57" endline="58">get_dpot2</referencedby>
-        <referencedby refid="class_disk_with_halo_1a145b49523bfd5c4884a25a42002007a7" compoundref="_disk_with_halo_8_h" startline="44" endline="45">get_mass</referencedby>
-        <referencedby refid="class_disk_with_halo_1a62e38f166a9a04cee6f4a7361114a444" compoundref="_disk_with_halo_8_h" startline="84" endline="87">get_max_radius</referencedby>
-        <referencedby refid="class_disk_with_halo_1ad319d4ea72ea88dfcd0c3b0e1e37f07d" compoundref="_disk_with_halo_8_h" startline="80" endline="83">get_min_radius</referencedby>
-        <referencedby refid="class_disk_with_halo_1abb298a3eff91de4660de03ec7e8c8a75" compoundref="_disk_with_halo_8_h" startline="50" endline="51">get_pot</referencedby>
-        <referencedby refid="class_disk_with_halo_1a522ab0472483200d97e5d9c18f437116" compoundref="_disk_with_halo_8_h" startline="60" endline="67">get_pot_dpot</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;AxiSymModel&gt; DiskWithHalo::h</definition>
-        <argsstring></argsstring>
-        <name>h</name>
-        <qualifiedname>DiskWithHalo::h</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="15" column="19" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="15" bodyend="-1"/>
-        <referencedby refid="class_disk_with_halo_1acd9e6c29b53f51e98397c52978c66241" compoundref="_disk_with_halo_8_h" startline="33" endline="40">DiskWithHalo</referencedby>
-        <referencedby refid="class_disk_with_halo_1af7007bf28863d9a11dab396ba123c1d5" compoundref="_disk_with_halo_8_h" startline="23" endline="30">DiskWithHalo</referencedby>
-        <referencedby refid="class_disk_with_halo_1a298f24fcd27cf5f837c18e52eafdc106" compoundref="_disk_with_halo_8_h" startline="54" endline="55">get_dpot</referencedby>
-        <referencedby refid="class_disk_with_halo_1a83af39a3f1f0eaaae16e9d6a54e57de3" compoundref="_disk_with_halo_8_h" startline="57" endline="58">get_dpot2</referencedby>
-        <referencedby refid="class_disk_with_halo_1a62e38f166a9a04cee6f4a7361114a444" compoundref="_disk_with_halo_8_h" startline="84" endline="87">get_max_radius</referencedby>
-        <referencedby refid="class_disk_with_halo_1ad319d4ea72ea88dfcd0c3b0e1e37f07d" compoundref="_disk_with_halo_8_h" startline="80" endline="83">get_min_radius</referencedby>
-        <referencedby refid="class_disk_with_halo_1abb298a3eff91de4660de03ec7e8c8a75" compoundref="_disk_with_halo_8_h" startline="50" endline="51">get_pot</referencedby>
-        <referencedby refid="class_disk_with_halo_1a522ab0472483200d97e5d9c18f437116" compoundref="_disk_with_halo_8_h" startline="60" endline="67">get_pot_dpot</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_disk_with_halo_1a99b80f19dfa533b08c3c57d6c3d834fd" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::d2fde2</definition>
-        <argsstring>(double E, double L) override</argsstring>
-        <name>d2fde2</name>
-        <qualifiedname>DiskWithHalo::d2fde2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a12d39568c81a72b9e3ea2277816d05f9">d2fde2</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="104" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="104" bodyend="107"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a7dc15ec4c77e2364412dcaf54003da54" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::dfde</definition>
-        <argsstring>(double E, double L) override</argsstring>
-        <name>dfde</name>
-        <qualifiedname>DiskWithHalo::dfde</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a2978a19f299f41fdea7e3cefc1164e3a">dfde</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="94" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="94" bodyend="97"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a41bbb6d6bc1fb19553e1ed43e67dbd37" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::dfdl</definition>
-        <argsstring>(double E, double L) override</argsstring>
-        <name>dfdl</name>
-        <qualifiedname>DiskWithHalo::dfdl</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a120cec5af54e43d727f83df8678cc93b">dfdl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="99" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="99" bodyend="102"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1af2d9d93b9ff0164985f33db2f666ae0a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>DiskWithHalo::DiskWithHalo</definition>
-        <argsstring>()</argsstring>
-        <name>DiskWithHalo</name>
-        <qualifiedname>DiskWithHalo::DiskWithHalo</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="20" column="3" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="20" bodyend="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1acd9e6c29b53f51e98397c52978c66241" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>DiskWithHalo::DiskWithHalo</definition>
-        <argsstring>(const DiskWithHalo &amp;t)</argsstring>
-        <name>DiskWithHalo</name>
-        <qualifiedname>DiskWithHalo::DiskWithHalo</qualifiedname>
-        <param>
-          <type>const <ref refid="class_disk_with_halo" kindref="compound">DiskWithHalo</ref> &amp;</type>
-          <declname>t</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="33" column="3" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="33" bodyend="40"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <references refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" compoundref="massmodel_8_h" startline="79">MassModel::dim</references>
-        <references refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" compoundref="massmodel_8_h" startline="165">AxiSymModel::dist_defined</references>
-        <references refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" compoundref="_disk_with_halo_8_h" startline="15">h</references>
-        <references refid="class_mass_model_1acf360c000464aca6299bc47894672d70" compoundref="massmodel_8_h" startline="81">MassModel::ModelID</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1af7007bf28863d9a11dab396ba123c1d5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>DiskWithHalo::DiskWithHalo</definition>
-        <argsstring>(std::shared_ptr&lt; AxiSymModel &gt; D, std::shared_ptr&lt; AxiSymModel &gt; H)</argsstring>
-        <name>DiskWithHalo</name>
-        <qualifiedname>DiskWithHalo::DiskWithHalo</qualifiedname>
-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-          <declname>D</declname>
-        </param>
-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-          <declname>H</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="23" column="3" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="23" bodyend="30"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <references refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" compoundref="massmodel_8_h" startline="79">MassModel::dim</references>
-        <references refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" compoundref="massmodel_8_h" startline="165">AxiSymModel::dist_defined</references>
-        <references refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" compoundref="_disk_with_halo_8_h" startline="15">h</references>
-        <references refid="class_mass_model_1acf360c000464aca6299bc47894672d70" compoundref="massmodel_8_h" startline="81">MassModel::ModelID</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a47949ec45a68566a57d65c737dfbe6df" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::distf</definition>
-        <argsstring>(double E, double L) override</argsstring>
-        <name>distf</name>
-        <qualifiedname>DiskWithHalo::distf</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a5530c3612f1c09c6c77401a9e21550b8">distf</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="89" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="89" bodyend="92"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a90dc033f414be9f3c41ee0c0fad633bc" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double DiskWithHalo::get_density</definition>
-        <argsstring>(const double r) override</argsstring>
-        <name>get_density</name>
-        <qualifiedname>DiskWithHalo::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="47" column="18" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="47" bodyend="48"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <referencedby refid="class_disk_with_halo_1ab499a49471cc87ecb12638adce08a15d" compoundref="_disk_with_halo_8_h" startline="72" endline="73">get_density</referencedby>
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-      <memberdef kind="function" id="class_disk_with_halo_1ab499a49471cc87ecb12638adce08a15d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::get_density</definition>
-        <argsstring>(const double x1, const double x2, const double x3) override</argsstring>
-        <name>get_density</name>
-        <qualifiedname>DiskWithHalo::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc">get_density</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The density at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="72" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="72" bodyend="73"/>
-        <references refid="class_disk_with_halo_1a90dc033f414be9f3c41ee0c0fad633bc" compoundref="_disk_with_halo_8_h" startline="47" endline="48">get_density</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a298f24fcd27cf5f837c18e52eafdc106" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double DiskWithHalo::get_dpot</definition>
-        <argsstring>(const double r) override</argsstring>
-        <name>get_dpot</name>
-        <qualifiedname>DiskWithHalo::get_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845">get_dpot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="54" column="18" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="54" bodyend="55"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <references refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" compoundref="_disk_with_halo_8_h" startline="15">h</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a83af39a3f1f0eaaae16e9d6a54e57de3" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double DiskWithHalo::get_dpot2</definition>
-        <argsstring>(const double r) override</argsstring>
-        <name>get_dpot2</name>
-        <qualifiedname>DiskWithHalo::get_dpot2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a77b9bb693457557d379167ca0ca2caae">get_dpot2</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="57" column="18" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="57" bodyend="58"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <references refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" compoundref="_disk_with_halo_8_h" startline="15">h</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a145b49523bfd5c4884a25a42002007a7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double DiskWithHalo::get_mass</definition>
-        <argsstring>(const double r) override</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>DiskWithHalo::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465">get_mass</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>Access the profile. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="44" column="18" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="44" bodyend="45"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <referencedby refid="class_disk_with_halo_1a68515654dbe5f8d4d27fdd5d4cc3bfcf" compoundref="_disk_with_halo_8_h" startline="69" endline="70">get_mass</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a68515654dbe5f8d4d27fdd5d4cc3bfcf" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::get_mass</definition>
-        <argsstring>(const double x1, const double x2, const double x3) override</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>DiskWithHalo::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787">get_mass</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get the mass inside of position (x, y, z) (this is ambiguous in general and will depend on the model) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="69" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="69" bodyend="70"/>
-        <references refid="class_disk_with_halo_1a145b49523bfd5c4884a25a42002007a7" compoundref="_disk_with_halo_8_h" startline="44" endline="45">get_mass</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a62e38f166a9a04cee6f4a7361114a444" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::get_max_radius</definition>
-        <argsstring>(void) override</argsstring>
-        <name>get_max_radius</name>
-        <qualifiedname>DiskWithHalo::get_max_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a87510a095e6b9533812eba57c7ca862c">get_max_radius</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="84" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="84" bodyend="87"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <references refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" compoundref="_disk_with_halo_8_h" startline="15">h</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1ad319d4ea72ea88dfcd0c3b0e1e37f07d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::get_min_radius</definition>
-        <argsstring>(void) override</argsstring>
-        <name>get_min_radius</name>
-        <qualifiedname>DiskWithHalo::get_min_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab304897a450a2d79f4e27841526b70e9">get_min_radius</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="80" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="80" bodyend="83"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <references refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" compoundref="_disk_with_halo_8_h" startline="15">h</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1abb298a3eff91de4660de03ec7e8c8a75" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double DiskWithHalo::get_pot</definition>
-        <argsstring>(const double r) override</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>DiskWithHalo::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="50" column="18" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="50" bodyend="51"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <references refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" compoundref="_disk_with_halo_8_h" startline="15">h</references>
-        <referencedby refid="class_disk_with_halo_1ab713038bfeeee6c0abc96760fa6f0a1f" compoundref="_disk_with_halo_8_h" startline="75" endline="76">get_pot</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1ab713038bfeeee6c0abc96760fa6f0a1f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double DiskWithHalo::get_pot</definition>
-        <argsstring>(const double x1, const double x2, const double x3) override</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>DiskWithHalo::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The potential at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="75" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="75" bodyend="76"/>
-        <references refid="class_disk_with_halo_1abb298a3eff91de4660de03ec7e8c8a75" compoundref="_disk_with_halo_8_h" startline="50" endline="51">get_pot</references>
-      </memberdef>
-      <memberdef kind="function" id="class_disk_with_halo_1a522ab0472483200d97e5d9c18f437116" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void DiskWithHalo::get_pot_dpot</definition>
-        <argsstring>(const double r, double &amp;ur, double &amp;dur) override</argsstring>
-        <name>get_pot_dpot</name>
-        <qualifiedname>DiskWithHalo::get_pot_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a4fc766458a1f45b3ece0410b2c85b632">get_pot_dpot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>ur</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dur</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="60" column="16" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="60" bodyend="67"/>
-        <references refid="class_disk_with_halo_1ab3c3130a2fcc26f1b451c28f1aa20dbe" compoundref="_disk_with_halo_8_h" startline="14">d</references>
-        <references refid="class_disk_with_halo_1a87f1d9290861d7a85c925c7b33d2fe43" compoundref="_disk_with_halo_8_h" startline="15">h</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>AxiSymModel</label>
-        <link refid="class_axi_sym_model"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>DiskWithHalo</label>
-        <link refid="class_disk_with_halo"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>MassModel</label>
-        <link refid="class_mass_model"/>
-      </node>
-      <node id="4">
-        <label>std::enable_shared_from_this&lt; AxiSymModel &gt;</label>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="7">
-        <label>ANGLE_GRID</label>
-        <link refid="struct_a_n_g_l_e___g_r_i_d"/>
-      </node>
-      <node id="2">
-        <label>AxiSymModel</label>
-        <link refid="class_axi_sym_model"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>gen_orb</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>DiskWithHalo</label>
-        <link refid="class_disk_with_halo"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>GaussQuad</label>
-        <link refid="class_gauss_quad"/>
-      </node>
-      <node id="3">
-        <label>MassModel</label>
-        <link refid="class_mass_model"/>
-      </node>
-      <node id="6">
-        <label>RegularOrbit</label>
-        <link refid="class_regular_orbit"/>
-      </node>
-      <node id="5">
-        <label>SphericalOrbit</label>
-        <link refid="class_spherical_orbit"/>
-        <childnode refid="6" relation="public-inheritance">
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>angle_grid</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>Gkn</edgelabel>
-        </childnode>
-      </node>
-      <node id="4">
-        <label>std::enable_shared_from_this&lt; AxiSymModel &gt;</label>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" line="10" column="1" bodyfile="/home/weinberg/Projects/EXP/include/DiskWithHalo.H" bodystart="11" bodyend="109"/>
-    <listofallmembers>
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-      <member refid="class_disk_with_halo_1af7007bf28863d9a11dab396ba123c1d5" prot="public" virt="non-virtual"><scope>DiskWithHalo</scope><name>DiskWithHalo</name></member>
-      <member refid="class_disk_with_halo_1acd9e6c29b53f51e98397c52978c66241" prot="public" virt="non-virtual"><scope>DiskWithHalo</scope><name>DiskWithHalo</name></member>
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-      <member refid="class_axi_sym_model_1acf573aca18c8e1687d639133d5710ea7" prot="protected" virt="non-virtual"><scope>DiskWithHalo</scope><name>Emin_grid</name></member>
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-      <member refid="class_axi_sym_model_1ad3e1a1fcfe55dfa0f9332673faaad460" prot="protected" virt="non-virtual"><scope>DiskWithHalo</scope><name>gen_firstime</name></member>
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diff --git a/doxyxml/class_double_exponential.xml b/doxyxml/class_double_exponential.xml
deleted file mode 100644
index 01b230c..0000000
--- a/doxyxml/class_double_exponential.xml
+++ /dev/null
@@ -1,252 +0,0 @@
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diff --git a/doxyxml/class_dynamic2d_array.xml b/doxyxml/class_dynamic2d_array.xml
deleted file mode 100644
index ccf6a47..0000000
--- a/doxyxml/class_dynamic2d_array.xml
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deleted file mode 100644
index 89e8227..0000000
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deleted file mode 100644
index c5c16fe..0000000
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-      <memberdef kind="variable" id="class_e_jcom_1aec1a7700ad5d390678255bb1b4ae09ed" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EJcom::alpha</definition>
-        <argsstring></argsstring>
-        <name>alpha</name>
-        <qualifiedname>EJcom::alpha</qualifiedname>
-        <briefdescription>
-<para>exponent in the argument of the erf </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/EJcom.H" line="36" column="10" bodyfile="/home/weinberg/Projects/EXP/src/EJcom.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_e_jcom_1abd1df7ac5f23130697cf19f064a5766a" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EJcom::cfac</definition>
-        <argsstring></argsstring>
-        <name>cfac</name>
-        <qualifiedname>EJcom::cfac</qualifiedname>
-        <briefdescription>
-<para>Prefactor for the erf ramp. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/EJcom.H" line="33" column="10" bodyfile="/home/weinberg/Projects/EXP/src/EJcom.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_e_jcom_1a484c3b0615ddf7de994a81950a864551" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; EJcom::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>EJcom::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/EJcom.H" line="42" column="25" bodyfile="/home/weinberg/Projects/EXP/src/EJcom.H" bodystart="42" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_e_jcom_1abf361e399dffa6ce2ef7e05e2c5b147a" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void EJcom::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>EJcom::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Initialize the force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/EJcom.H" line="39" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_e_jcom_1a2082c826093660d4e4418695a987d75d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>EJcom::EJcom</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf)</argsstring>
-        <name>EJcom</name>
-        <qualifiedname>EJcom::EJcom</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (a <ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>line</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>passes any parameters (rsphSL, rmin and numr) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/EJcom.H" line="50" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_e_jcom_1ae04818161d9df4becfdd3d34146ec8ac" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double EJcom::mixture</definition>
-        <argsstring>(double *p)</argsstring>
-        <name>mixture</name>
-        <qualifiedname>EJcom::mixture</qualifiedname>
-        <reimplements refid="class_two_center_1aed04abf7863ba4d9e7e059593f5cecdd">mixture</reimplements>
-        <param>
-          <type>double *</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Mixture function for the two expansions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/EJcom.H" line="53" column="10"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Computes the potential, acceleration and density using basis expansion solutions fitting to peak potential and COM. This implements a <ref refid="class_two_center" kindref="compound">TwoCenter</ref> class by providing a mixture function.</para>
-<para>The mixture function is:  <formula id="94">\[
-f({\bf r}) = \hbox{erf}\left(C\left[{|{\bf r} - {\bf r}_{peak}|\over
-|{\bf r}_{COM} - {\bf r}_{peak}|}\right]^\alpha\right)
-\]</formula> On evaluation, the acceleration from the grid centered on <formula id="75">${\bf r}_{COM}$</formula> is multiplied by <formula id="76">$f({\bf r})$</formula> and the the acceleration from the grid centered on <formula id="77">${\bf r}_{peak}$</formula> is multiplied by <formula id="78">$1-f({\bf r})$</formula></para>
-<para>See SphereTwoCenter for other parameters controlling the spherical expansion.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>cfac</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is a prefactor <formula id="79">$C$</formula> for the erf ramp above </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>alpha</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the exponent in the argument of the erf ( <formula id="80">$\alpha$</formula>) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>EJcom</label>
-        <link refid="class_e_jcom"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="2">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="9">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>EJcom</label>
-        <link refid="class_e_jcom"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="10">
-        <label>MixtureBasis</label>
-        <link refid="class_mixture_basis"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>p</edgelabel>
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="2">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-        <childnode refid="9" relation="usage">
-          <edgelabel>exp_in</edgelabel>
-          <edgelabel>exp_out</edgelabel>
-        </childnode>
-        <childnode refid="10" relation="usage">
-          <edgelabel>mix_in</edgelabel>
-          <edgelabel>mix_out</edgelabel>
-        </childnode>
-      </node>
-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/EJcom.H" line="27" column="1" bodyfile="/home/weinberg/Projects/EXP/src/EJcom.H" bodystart="28" bodyend="55"/>
-    <listofallmembers>
-      <member refid="class_two_center_1a6351d92967a24357a5b6650947e7bf90" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>accum_histo</name></member>
-      <member refid="class_e_jcom_1aec1a7700ad5d390678255bb1b4ae09ed" prot="private" virt="non-virtual"><scope>EJcom</scope><name>alpha</name></member>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>EJcom</scope><name>atol</name></member>
-      <member refid="class_two_center_1a0246092f794de8555a99d3b0ebe86abf" prot="private" virt="non-virtual"><scope>EJcom</scope><name>basis</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>cC</name></member>
-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>EJcom</scope><name>cc_lock</name></member>
-      <member refid="class_e_jcom_1abd1df7ac5f23130697cf19f064a5766a" prot="private" virt="non-virtual"><scope>EJcom</scope><name>cfac</name></member>
-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>EJcom</scope><name>ClearExternal</name></member>
-      <member refid="class_two_center_1af6341c0c9211c12fc6980c2bee31f077" prot="public" virt="non-virtual"><scope>EJcom</scope><name>Cmixture</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>coef_dump</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>EJcom</scope><name>compute</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>conf</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>EJcom</scope><name>cube</name></member>
-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>cuda_aware</name></member>
-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>EJcom</scope><name>cudaAware</name></member>
-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>current_keys</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>EJcom</scope><name>cylinder</name></member>
-      <member refid="class_two_center_1afab216f509fdd00edf7093864b7a602c" prot="private" virt="virtual"><scope>EJcom</scope><name>determine_acceleration_and_potential_thread</name></member>
-      <member refid="class_two_center_1a0a597e62e05bd437540412fdd1dd0ba5" prot="public" virt="virtual"><scope>EJcom</scope><name>determine_coefficients</name></member>
-      <member refid="class_two_center_1a92e47a350f1483a891a69d9972d5af59" prot="public" virt="virtual"><scope>EJcom</scope><name>determine_coefficients</name></member>
-      <member refid="class_two_center_1ad08f6706e74ee6a1ce58e549bd0e9afd" prot="private" virt="virtual"><scope>EJcom</scope><name>determine_coefficients_thread</name></member>
-      <member refid="class_pot_accel_1a6a9ec23d29b553c1625bd8e88fe7692d" prot="public" virt="non-virtual"><scope>EJcom</scope><name>dof</name></member>
-      <member refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf" prot="public" virt="virtual"><scope>EJcom</scope><name>dump_coefs</name></member>
-      <member refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c" prot="public" virt="virtual"><scope>EJcom</scope><name>dump_coefs_h5</name></member>
-      <member refid="class_two_center_1a6c25023bca66055cc078ea5e50810fcc" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>dz</name></member>
-      <member refid="class_e_jcom_1a2082c826093660d4e4418695a987d75d" prot="public" virt="non-virtual"><scope>EJcom</scope><name>EJcom</name></member>
-      <member refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" prot="private" virt="non-virtual"><scope>EJcom</scope><name>exp_in</name></member>
-      <member refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" prot="private" virt="non-virtual"><scope>EJcom</scope><name>exp_out</name></member>
-      <member refid="class_pot_accel_1abee9651463af53460b622250d311329e" prot="public" virt="non-virtual"><scope>EJcom</scope><name>exp_thread_fork</name></member>
-      <member refid="class_pot_accel_1adb6ef0bdae7d3520ca1f9fd8a6d648ea" prot="public" virt="non-virtual"><scope>EJcom</scope><name>geometry</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fd" prot="public" virt="non-virtual"><scope>EJcom</scope><name>Geometry</name></member>
-      <member refid="class_pot_accel_1ade38f6ecdf80f80cde847d463b14909b" prot="public" virt="non-virtual"><scope>EJcom</scope><name>geoname</name></member>
-      <member refid="class_two_center_1ac08ca04cfea84f1c816c7a1645389c6b" prot="public" virt="virtual"><scope>EJcom</scope><name>get_acceleration_and_potential</name></member>
-      <member refid="class_pot_accel_1a0998c361bca277b3bba95f59acaba203" prot="public" virt="virtual"><scope>EJcom</scope><name>getScale</name></member>
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-      <member refid="class_two_center_1a5156955100153118062a2d6514bcbd8b" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>histo</name></member>
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-      <member refid="class_e_jcom_1abf361e399dffa6ce2ef7e05e2c5b147a" prot="private" virt="virtual"><scope>EJcom</scope><name>initialize</name></member>
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-      <member refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" prot="public" virt="non-virtual"><scope>EJcom</scope><name>PotAccel</name></member>
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-      <member refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" prot="public" virt="virtual"><scope>EJcom</scope><name>RegisterComponent</name></member>
-      <member refid="class_two_center_1a9a34eaaf60d08861b57bd04f9c9d7f07" prot="private" virt="non-virtual"><scope>EJcom</scope><name>reset_histo</name></member>
-      <member refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>scale</name></member>
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-      <member refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" prot="public" virt="non-virtual"><scope>EJcom</scope><name>SetExternal</name></member>
-      <member refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" prot="public" virt="virtual"><scope>EJcom</scope><name>setScale</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda0a1acd8c0d6e745fb0ae3e33e458a9b8" prot="public" virt="non-virtual"><scope>EJcom</scope><name>slab</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda996ce4577548b6da6b1330a78b1c6f6a" prot="public" virt="non-virtual"><scope>EJcom</scope><name>sphere</name></member>
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-      <member refid="class_pot_accel_1a125d7343a34d292a3e4a48a5d984cac4" prot="private" virt="non-virtual"><scope>EJcom</scope><name>td</name></member>
-      <member refid="class_pot_accel_1a86d0d012a44e2eb7c3e385d852a5fdde" prot="public" virt="non-virtual"><scope>EJcom</scope><name>thread_timing_beg</name></member>
-      <member refid="class_pot_accel_1a76c805cd8d0d134d37929eeb48115b33" prot="public" virt="non-virtual"><scope>EJcom</scope><name>thread_timing_end</name></member>
-      <member refid="class_pot_accel_1a4315e73a641c54eefc548b7d14cb06b6" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>timer_list</name></member>
-      <member refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" prot="public" virt="non-virtual"><scope>EJcom</scope><name>TList</name></member>
-      <member refid="class_two_center_1a9489bd2add9e9d423e03b0854348d293" prot="public" virt="non-virtual"><scope>EJcom</scope><name>TwoCenter</name></member>
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-      <member refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>use_external</name></member>
-      <member refid="class_pot_accel_1ae2e0dbf849707704a3d42a1fa91ce060" prot="public" virt="non-virtual"><scope>EJcom</scope><name>Used</name></member>
-      <member refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" prot="protected" virt="non-virtual"><scope>EJcom</scope><name>used</name></member>
-      <member refid="class_e_jcom_1a484c3b0615ddf7de994a81950a864551" prot="private" virt="non-virtual"><scope>EJcom</scope><name>valid_keys</name></member>
-      <member refid="class_two_center_1a0789fd9481fb5fd2763a66d81d42bb8e" prot="private" virt="non-virtual"><scope>EJcom</scope><name>write_histo</name></member>
-      <member refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" prot="public" virt="virtual"><scope>EJcom</scope><name>~PotAccel</name></member>
-      <member refid="class_two_center_1a02ec2f56f013952ba88fe3db67d52c9d" prot="public" virt="non-virtual"><scope>EJcom</scope><name>~TwoCenter</name></member>
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diff --git a/doxyxml/class_e_l3.xml b/doxyxml/class_e_l3.xml
deleted file mode 100644
index 3fc60fc..0000000
--- a/doxyxml/class_e_l3.xml
+++ /dev/null
@@ -1,154 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_e_l3" kind="class" language="C++" prot="public">
-    <compoundname>EL3</compoundname>
-    <includes refid="_orient_8_h" local="no">Orient.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_e_l3_1a9e40210ff6ff599e9b9706ec3cfd8a58" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EL3::E</definition>
-        <argsstring></argsstring>
-        <name>E</name>
-        <qualifiedname>EL3::E</qualifiedname>
-        <briefdescription>
-<para>Binding energy. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="29" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="29" bodyend="-1"/>
-        <referencedby refid="structlt_e_l3_1ae32d2b2eb0c63069c1182038873e0ec5" compoundref="_orient_8_h" startline="52" endline="55">ltEL3::operator()</referencedby>
-        <referencedby refid="class_e_l3_1a64b35edb3e58f6128593fda6cb8d0970" compoundref="_orient_8_h" startline="39" endline="41">operator&lt;</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_e_l3_1a26d078ac221c117f3311385f31560d4b" prot="public" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d EL3::L</definition>
-        <argsstring></argsstring>
-        <name>L</name>
-        <qualifiedname>EL3::L</qualifiedname>
-        <briefdescription>
-<para>Angular momentum. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="31" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_e_l3_1a60896ba69c9671836013c8b485ad8897" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EL3::M</definition>
-        <argsstring></argsstring>
-        <name>M</name>
-        <qualifiedname>EL3::M</qualifiedname>
-        <briefdescription>
-<para>Mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="27" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_e_l3_1abe7b8f56ca7f549301ca476b3a39b4a0" prot="public" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d EL3::R</definition>
-        <argsstring></argsstring>
-        <name>R</name>
-        <qualifiedname>EL3::R</qualifiedname>
-        <briefdescription>
-<para>Position. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="33" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_e_l3_1a6aaf6e17695b69ded83b47e8a27a704b" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EL3::T</definition>
-        <argsstring></argsstring>
-        <name>T</name>
-        <qualifiedname>EL3::T</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_time" kindref="compound">Time</ref>. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="25" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="25" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_e_l3_1a3eec7575af3cf41e105f04aacb85ef16" prot="public" static="no" const="yes" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EL3::debug</definition>
-        <argsstring>() const</argsstring>
-        <name>debug</name>
-        <qualifiedname>EL3::debug</qualifiedname>
-        <briefdescription>
-<para>Debug output. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="44" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_e_l3_1a2f87daac6fa329a862b495621b14bd36" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>EL3::EL3</definition>
-        <argsstring>()</argsstring>
-        <name>EL3</name>
-        <qualifiedname>EL3::EL3</qualifiedname>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="36" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="36" bodyend="36"/>
-      </memberdef>
-      <memberdef kind="function" id="class_e_l3_1a64b35edb3e58f6128593fda6cb8d0970" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool EL3::operator&lt;</definition>
-        <argsstring>(const EL3 &amp;x) const</argsstring>
-        <name>operator&lt;</name>
-        <qualifiedname>EL3::operator&lt;</qualifiedname>
-        <param>
-          <type>const <ref refid="class_e_l3" kindref="compound">EL3</ref> &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Comparison member for ordering energy. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="39" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="39" bodyend="41"/>
-        <references refid="class_e_l3_1a9e40210ff6ff599e9b9706ec3cfd8a58" compoundref="_orient_8_h" startline="29">E</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Class to hold energy and angular momentum for use in centering a component. Helper class for class <ref refid="class_orient" kindref="compound">Orient</ref>. </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="21" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="22" bodyend="45"/>
-    <listofallmembers>
-      <member refid="class_e_l3_1a3eec7575af3cf41e105f04aacb85ef16" prot="public" virt="non-virtual"><scope>EL3</scope><name>debug</name></member>
-      <member refid="class_e_l3_1a9e40210ff6ff599e9b9706ec3cfd8a58" prot="public" virt="non-virtual"><scope>EL3</scope><name>E</name></member>
-      <member refid="class_e_l3_1a2f87daac6fa329a862b495621b14bd36" prot="public" virt="non-virtual"><scope>EL3</scope><name>EL3</name></member>
-      <member refid="class_e_l3_1a26d078ac221c117f3311385f31560d4b" prot="public" virt="non-virtual"><scope>EL3</scope><name>L</name></member>
-      <member refid="class_e_l3_1a60896ba69c9671836013c8b485ad8897" prot="public" virt="non-virtual"><scope>EL3</scope><name>M</name></member>
-      <member refid="class_e_l3_1a64b35edb3e58f6128593fda6cb8d0970" prot="public" virt="non-virtual"><scope>EL3</scope><name>operator&lt;</name></member>
-      <member refid="class_e_l3_1abe7b8f56ca7f549301ca476b3a39b4a0" prot="public" virt="non-virtual"><scope>EL3</scope><name>R</name></member>
-      <member refid="class_e_l3_1a6aaf6e17695b69ded83b47e8a27a704b" prot="public" virt="non-virtual"><scope>EL3</scope><name>T</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_e_x_p_exception.xml b/doxyxml/class_e_x_p_exception.xml
deleted file mode 100644
index a0a6871..0000000
--- a/doxyxml/class_e_x_p_exception.xml
+++ /dev/null
@@ -1,487 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_e_x_p_exception" kind="class" language="C++" prot="public">
-    <compoundname>EXPException</compoundname>
-    <basecompoundref prot="public" virt="non-virtual">std::exception</basecompoundref>
-    <derivedcompoundref refid="class_bad_index_exception" prot="public" virt="non-virtual">BadIndexException</derivedcompoundref>
-    <derivedcompoundref refid="class_file_create_error" prot="public" virt="non-virtual">FileCreateError</derivedcompoundref>
-    <derivedcompoundref refid="class_file_open_error" prot="public" virt="non-virtual">FileOpenError</derivedcompoundref>
-    <derivedcompoundref refid="class_generic_error" prot="public" virt="non-virtual">GenericError</derivedcompoundref>
-    <derivedcompoundref refid="class_internal_error" prot="public" virt="non-virtual">InternalError</derivedcompoundref>
-    <derivedcompoundref refid="class_yaml_config_error" prot="public" virt="non-virtual">YamlConfigError</derivedcompoundref>
-    <includes refid="_e_x_p_exception_8_h" local="no">EXPException.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool EXPException::deadlock</definition>
-        <argsstring></argsstring>
-        <name>deadlock</name>
-        <qualifiedname>EXPException::deadlock</qualifiedname>
-        <briefdescription>
-<para>Possible deadlock? </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPException.H" line="101" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EXPException.H" bodystart="101" bodyend="-1"/>
-        <referencedby refid="class_e_x_p_exception_1a05ed8d4532303db80cf357b9da1e8a38" compoundref="_e_x_p_exception_8_h" startline="24" endline="36">EXPException</referencedby>
-        <referencedby refid="class_e_x_p_exception_1aa2df34e676cdd1aeae016eb1fdc62489" compoundref="_e_x_p_exception_8_h" startline="80" endline="89">EXPException</referencedby>
-        <referencedby refid="class_e_x_p_exception_1a47936a221431359a96c20ab5363d9f1c" compoundref="_e_x_p_exception_8_h" startline="75" endline="75">getDeadlock</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int EXPException::errorcode</definition>
-        <argsstring></argsstring>
-        <name>errorcode</name>
-        <qualifiedname>EXPException::errorcode</qualifiedname>
-        <briefdescription>
-<para>Return code. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPException.H" line="104" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EXPException.H" bodystart="104" bodyend="-1"/>
-        <referencedby refid="class_e_x_p_exception_1a05ed8d4532303db80cf357b9da1e8a38" compoundref="_e_x_p_exception_8_h" startline="24" endline="36">EXPException</referencedby>
-        <referencedby refid="class_e_x_p_exception_1aa2df34e676cdd1aeae016eb1fdc62489" compoundref="_e_x_p_exception_8_h" startline="80" endline="89">EXPException</referencedby>
-        <referencedby refid="class_e_x_p_exception_1a2428b09c9f0c5dddf9fbefbcbbbcb6fd" compoundref="_e_x_p_exception_8_h" startline="72" endline="72">getErrorcode</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string EXPException::errormessage</definition>
-        <argsstring></argsstring>
-        <name>errormessage</name>
-        <qualifiedname>EXPException::errormessage</qualifiedname>
-        <briefdescription>
-<para>Error message describing the error in more detail. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPException.H" line="95" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EXPException.H" bodystart="95" bodyend="-1"/>
-        <referencedby refid="class_bad_index_exception_1ade06db40b165a1977c58926df9718799" compoundref="_e_x_p_exception_8_h" startline="171" endline="182">BadIndexException::BadIndexException</referencedby>
-        <referencedby refid="class_e_x_p_exception_1a05ed8d4532303db80cf357b9da1e8a38" compoundref="_e_x_p_exception_8_h" startline="24" endline="36">EXPException</referencedby>
-        <referencedby refid="class_file_create_error_1ae117ad5553d6873129b252e2dbbad325" compoundref="_e_x_p_exception_8_h" startline="203" endline="212">FileCreateError::FileCreateError</referencedby>
-        <referencedby refid="class_file_create_error_1aba98e6689378c909891beae845560ecb" compoundref="_e_x_p_exception_8_h" startline="191" endline="200">FileCreateError::FileCreateError</referencedby>
-        <referencedby refid="class_file_open_error_1a0607ea472b0ab159e178c086a19037e3" compoundref="_e_x_p_exception_8_h" startline="233" endline="242">FileOpenError::FileOpenError</referencedby>
-        <referencedby refid="class_file_open_error_1af38477ce6a614e444385c4c6fbdb3cce" compoundref="_e_x_p_exception_8_h" startline="221" endline="230">FileOpenError::FileOpenError</referencedby>
-        <referencedby refid="class_generic_error_1a642e05b0950ff31edb4b6389e2cec337" compoundref="_e_x_p_exception_8_h" startline="120" endline="130">GenericError::GenericError</referencedby>
-        <referencedby refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" compoundref="_e_x_p_exception_8_h" startline="46" endline="56">getErrorMessage</referencedby>
-        <referencedby refid="class_internal_error_1a371d8f1ac6e04de446c3d909915cd242" compoundref="_e_x_p_exception_8_h" startline="152" endline="162">InternalError::InternalError</referencedby>
-        <referencedby refid="class_internal_error_1a9ea443f990a04185c7ce331a15d22ebb" compoundref="_e_x_p_exception_8_h" startline="141" endline="149">InternalError::InternalError</referencedby>
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-        <type>std::string</type>
-        <definition>std::string EXPException::exceptionname</definition>
-        <argsstring></argsstring>
-        <name>exceptionname</name>
-        <qualifiedname>EXPException::exceptionname</qualifiedname>
-        <briefdescription>
-<para>Friendly name of the exception. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPException.H" line="92" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EXPException.H" bodystart="92" bodyend="-1"/>
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diff --git a/doxyxml/class_ellip_force.xml b/doxyxml/class_ellip_force.xml
deleted file mode 100644
index 9733f11..0000000
--- a/doxyxml/class_ellip_force.xml
+++ /dev/null
@@ -1,359 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_ellip_force" kind="class" language="C++" prot="public">
-    <compoundname>EllipForce</compoundname>
-    <includes refid="_ellip_force_8_h" local="no">EllipForce.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_ellip_force_1ab13babd22f986650e5f4082fbdd5286f" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EllipForce::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>EllipForce::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" line="16" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" bodystart="16" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellip_force_1aaff158f80cc8c72f63dff8a68336bf9d" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EllipForce::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>EllipForce::b</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" line="16" column="12" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" bodystart="16" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_ellip_force_1a8a77ca0985d9b6eea8cef85e04e838d6" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EllipForce::c</definition>
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-        <name>c</name>
-        <qualifiedname>EllipForce::c</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" line="16" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" bodystart="16" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellip_force_1a5915a76a613aa4f5cca490cc49875b05" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_lege_quad" kindref="compound">LegeQuad</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;LegeQuad&gt; EllipForce::lq</definition>
-        <argsstring></argsstring>
-        <name>lq</name>
-        <qualifiedname>EllipForce::lq</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" line="18" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" bodystart="18" bodyend="-1"/>
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-        <type>std::vector&lt; double &gt;</type>
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-        <argsstring></argsstring>
-        <name>m</name>
-        <qualifiedname>EllipForce::m</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" line="20" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" bodystart="20" bodyend="-1"/>
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-        <type>double</type>
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-        <name>mass</name>
-        <qualifiedname>EllipForce::mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" line="16" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipForce.H" bodystart="16" bodyend="-1"/>
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diff --git a/doxyxml/class_ellipsoid_force.xml b/doxyxml/class_ellipsoid_force.xml
deleted file mode 100644
index ba949e7..0000000
--- a/doxyxml/class_ellipsoid_force.xml
+++ /dev/null
@@ -1,976 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_ellipsoid_force" kind="class" language="C++" prot="public">
-    <compoundname>EllipsoidForce</compoundname>
-    <includes refid="_ellipsoid_force_8_h" local="no">EllipsoidForce.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="enum" id="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33c" prot="public" static="no" strong="no">
-        <type></type>
-        <name>BarType</name>
-        <qualifiedname>EllipsoidForce::BarType</qualifiedname>
-        <enumvalue id="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33ca84e8fea4a2ad4b12273a99a4583de446" prot="public">
-          <name>powerlaw</name>
-          <briefdescription>
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-          <detaileddescription>
-          </detaileddescription>
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-        <enumvalue id="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33caa6dfce566592264a9db6887e5b172566" prot="public">
-          <name>ferrers</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
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-          <name>expon</name>
-          <briefdescription>
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-          <detaileddescription>
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-        <briefdescription>
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-      </memberdef>
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-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_ellipsoid_force_1aa08c9a1ab8f936a3b1f6a84a7272ac32" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; EllipsoidForce::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>EllipsoidForce::a</qualifiedname>
-        <briefdescription>
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-        <type><ref refid="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33c" kindref="member">BarType</ref></type>
-        <definition>BarType EllipsoidForce::bartype</definition>
-        <argsstring></argsstring>
-        <name>bartype</name>
-        <qualifiedname>EllipsoidForce::bartype</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type>vector&lt; double &gt;</type>
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-        <name>dX</name>
-        <qualifiedname>EllipsoidForce::dX</qualifiedname>
-        <briefdescription>
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-      <memberdef kind="variable" id="class_ellipsoid_force_1a23972693c77d7108c28d7453a46f31ac" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_lege_quad" kindref="compound">LegeQuad</ref> &gt;</type>
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-        <qualifiedname>EllipsoidForce::gq</qualifiedname>
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-        <argsstring></argsstring>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="63" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="63" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_ellipsoid_force_1adf42fdda12ee0c8ed288b9c30f032512" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EllipsoidForce::rtmax</definition>
-        <argsstring></argsstring>
-        <name>rtmax</name>
-        <qualifiedname>EllipsoidForce::rtmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="69" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="69" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellipsoid_force_1ae07060728b825fe672bb2269a4ec1691" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EllipsoidForce::rtmin</definition>
-        <argsstring></argsstring>
-        <name>rtmin</name>
-        <qualifiedname>EllipsoidForce::rtmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="69" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="69" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellipsoid_force_1a5190bd267391b0fcd1b8d2248651a03b" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; EllipsoidForce::table</definition>
-        <argsstring></argsstring>
-        <name>table</name>
-        <qualifiedname>EllipsoidForce::table</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="68" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="68" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellipsoid_force_1aa1e7a78ae0b203ff8565ce5ddd8979b0" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool EllipsoidForce::tlog</definition>
-        <argsstring></argsstring>
-        <name>tlog</name>
-        <qualifiedname>EllipsoidForce::tlog</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="70" column="20" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="70" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellipsoid_force_1a44c1dc0cb03fc9815e471f7b7c6cc2ec" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool EllipsoidForce::tmade</definition>
-        <argsstring></argsstring>
-        <name>tmade</name>
-        <qualifiedname>EllipsoidForce::tmade</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="70" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="70" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellipsoid_force_1a414904096eebce2d3025f7886d7650dd" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; EllipsoidForce::uu</definition>
-        <argsstring></argsstring>
-        <name>uu</name>
-        <qualifiedname>EllipsoidForce::uu</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="62" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="62" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_ellipsoid_force_1a0c0c92aa3e2020e84827ed87f329b76e" prot="public" static="yes" mutable="no">
-        <type>string</type>
-        <definition>string EllipsoidForce::cache_file</definition>
-        <argsstring></argsstring>
-        <name>cache_file</name>
-        <qualifiedname>EllipsoidForce::cache_file</qualifiedname>
-        <briefdescription>
-<para>Interpolation grid cache name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="85" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="85" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellipsoid_force_1abf8cfe8d2e32db0761bd80e9f5427fa1" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double EllipsoidForce::dfrac</definition>
-        <argsstring></argsstring>
-        <name>dfrac</name>
-        <qualifiedname>EllipsoidForce::dfrac</qualifiedname>
-        <briefdescription>
-<para>Fraction of grid step for numerical derivatives. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="82" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="82" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ellipsoid_force_1a455ba8fcaa1b3a8e95a31c2757a07abf" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int EllipsoidForce::n</definition>
-        <argsstring></argsstring>
-        <name>n</name>
-        <qualifiedname>EllipsoidForce::n</qualifiedname>
-        <briefdescription>
-<para>Number of points for the monopole/quadrupole computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="79" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="79" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_ellipsoid_force_1a29b6c722d878a52fe531e25276c3ef9c" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool EllipsoidForce::nindx</definition>
-        <argsstring>(Eigen::Vector3d &amp;x, Eigen::Vector3i &amp;n)</argsstring>
-        <name>nindx</name>
-        <qualifiedname>EllipsoidForce::nindx</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::Vector3i &amp;</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="71" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1a887b34511d45251c665526504913c981" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool EllipsoidForce::read_cache</definition>
-        <argsstring>()</argsstring>
-        <name>read_cache</name>
-        <qualifiedname>EllipsoidForce::read_cache</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="74" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1a854dc7fcdf30ecab642b919edc74bd74" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EllipsoidForce::solve</definition>
-        <argsstring>(vector&lt; double &gt; x, double m2)</argsstring>
-        <name>solve</name>
-        <qualifiedname>EllipsoidForce::solve</qualifiedname>
-        <param>
-          <type>vector&lt; double &gt;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>m2</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="65" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1a583ee6f260aa6b1c31c911786b7114b4" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EllipsoidForce::write_cache</definition>
-        <argsstring>()</argsstring>
-        <name>write_cache</name>
-        <qualifiedname>EllipsoidForce::write_cache</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="73" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_ellipsoid_force_1ab1dbb7ca5e59031860b5c91e24ef2f64" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>EllipsoidForce::EllipsoidForce</definition>
-        <argsstring>(double a, double b, double c, double mass, double rmin, double rmax, BarType bartype, bool quad, double param=0.0, int num=100, int numr=100)</argsstring>
-        <name>EllipsoidForce</name>
-        <qualifiedname>EllipsoidForce::EllipsoidForce</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>a</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>b</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type><ref refid="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33c" kindref="member">BarType</ref></type>
-          <declname>bartype</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>quad</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>param</declname>
-          <defval>0.0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>num</declname>
-          <defval>100</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-          <defval>100</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="88" column="3"/>
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-      <memberdef kind="function" id="class_ellipsoid_force_1ad874304164b322fe14b3e4493f256b1b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EllipsoidForce::getDens</definition>
-        <argsstring>(vector&lt; double &gt; x)</argsstring>
-        <name>getDens</name>
-        <qualifiedname>EllipsoidForce::getDens</qualifiedname>
-        <param>
-          <type>vector&lt; double &gt;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Returns the density at position x. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="105" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1ab578edab3c3c4dbafdb2ccfd2f5285eb" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EllipsoidForce::getPotl</definition>
-        <argsstring>(double r)</argsstring>
-        <name>getPotl</name>
-        <qualifiedname>EllipsoidForce::getPotl</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Returns the radial part of quadrupole potential. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="102" column="10"/>
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-      <memberdef kind="function" id="class_ellipsoid_force_1a9253e11731aa1384877d61f795bf2870" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EllipsoidForce::getPotl</definition>
-        <argsstring>(vector&lt; double &gt; x)</argsstring>
-        <name>getPotl</name>
-        <qualifiedname>EllipsoidForce::getPotl</qualifiedname>
-        <param>
-          <type>vector&lt; double &gt;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Returns the potential at position x. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="99" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1acc1c5319988e189de2b06d05ca788a42" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EllipsoidForce::getSurfDens</definition>
-        <argsstring>(double r)</argsstring>
-        <name>getSurfDens</name>
-        <qualifiedname>EllipsoidForce::getSurfDens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Compute the surface density along the major axis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="108" column="10"/>
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-      <memberdef kind="function" id="class_ellipsoid_force_1a26363e415fec56f09cfaecf8fd035263" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EllipsoidForce::MakeTable</definition>
-        <argsstring>(int n1, int n2, int n3)</argsstring>
-        <name>MakeTable</name>
-        <qualifiedname>EllipsoidForce::MakeTable</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>n1</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n2</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n3</declname>
-        </param>
-        <briefdescription>
-<para>Tabulate the potential and force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="120" column="8"/>
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-      <memberdef kind="function" id="class_ellipsoid_force_1aa42079cab4f8cd532947ac1ac3804fa2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EllipsoidForce::MassInertia</definition>
-        <argsstring>(double &amp;M, vector&lt; double &gt; &amp;I)</argsstring>
-        <name>MassInertia</name>
-        <qualifiedname>EllipsoidForce::MassInertia</qualifiedname>
-        <param>
-          <type>double &amp;</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>vector&lt; double &gt; &amp;</type>
-          <declname>I</declname>
-        </param>
-        <briefdescription>
-<para>Returns the total mass and moment of inertia vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="96" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1acef730680da86abf64b745775abd293f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool EllipsoidForce::quadpot</definition>
-        <argsstring>(double r, double &amp;f, double &amp;fr, double &amp;M)</argsstring>
-        <name>quadpot</name>
-        <qualifiedname>EllipsoidForce::quadpot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>f</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>M</declname>
-        </param>
-        <briefdescription>
-<para>Get the quadrupole components at the radius r. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="117" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1a0439ca49090c9610d5c33840a54cf4cb" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EllipsoidForce::RhoBar</definition>
-        <argsstring>(double r)</argsstring>
-        <name>RhoBar</name>
-        <qualifiedname>EllipsoidForce::RhoBar</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Quadrupole bar density for radius r. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="111" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1a66357eba0662d46d5ce1f4f016e2cd77" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EllipsoidForce::TableEval</definition>
-        <argsstring>(vector&lt; double &gt; x, vector&lt; double &gt; &amp;forcepot)</argsstring>
-        <name>TableEval</name>
-        <qualifiedname>EllipsoidForce::TableEval</qualifiedname>
-        <param>
-          <type>vector&lt; double &gt;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>vector&lt; double &gt; &amp;</type>
-          <declname>forcepot</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the force (indices 0,1,2) potential (index 3) on the table. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="123" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1a9437c95881b78c60412c6b42c4fc1aca" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EllipsoidForce::U22</definition>
-        <argsstring>(double r)</argsstring>
-        <name>U22</name>
-        <qualifiedname>EllipsoidForce::U22</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Quadrupole potential term for radius r. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="114" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ellipsoid_force_1a120074a67c9ab1b47c6a05f1cd93c450" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>EllipsoidForce::~EllipsoidForce</definition>
-        <argsstring>()</argsstring>
-        <name>~EllipsoidForce</name>
-        <qualifiedname>EllipsoidForce::~EllipsoidForce</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="93" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Defines potential and force for ellipsoid models</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>a</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the major axis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>b</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the submajor (middle) axis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>c</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minor axis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mass</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the total mass for the ellipsoid </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>num</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of integration knots </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of grid points in the radial table</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-<simplesect kind="note"><para>{Mathematics}</para>
-</simplesect>
-Internal potential has the form (Chandra pg. 52, eqn. 93)  <formula id="101">\[
-V = \pi G a_1 a_2 a_3 \int^\infty_0\frac{du}{\Delta}
-\left[\Psi(1) - \Psi(m^2(u))\right]
-\]</formula> where  <formula id="102">\[
-m^2(u) = \sum_{i=1}^3\frac{x_i^2}{a_i^2 + u}
-\]</formula> and  <formula id="103">\[
-\Psi(m^2) = \int_1^{m^2} dm^2\,\rho(m^2).
-\]</formula></para>
-<para>The external potential has the form (Cha ndra pg. 51, eqn. 89)  <formula id="104">\[
-V = \pi G a_1 a_2 a_3 \int^\infty_\lambda\frac{du}{\Delta}
-\left[\Psi(1) - \Psi(m^2(u))\right].
-\]</formula> </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" line="46" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H" bodystart="47" bodyend="124"/>
-    <listofallmembers>
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-      <member refid="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33c" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>BarType</name></member>
-      <member refid="class_ellipsoid_force_1a36df456e74b9790499745d649c4b8c1d" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>bartype</name></member>
-      <member refid="class_ellipsoid_force_1a0c0c92aa3e2020e84827ed87f329b76e" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>cache_file</name></member>
-      <member refid="class_ellipsoid_force_1abf8cfe8d2e32db0761bd80e9f5427fa1" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>dfrac</name></member>
-      <member refid="class_ellipsoid_force_1a81272de8e016f2f2be2b0bcfc874c223" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>dX</name></member>
-      <member refid="class_ellipsoid_force_1ab1dbb7ca5e59031860b5c91e24ef2f64" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>EllipsoidForce</name></member>
-      <member refid="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33cac2e7417e5d2f67e5705fa4410bbce4d4" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>expon</name></member>
-      <member refid="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33caa6dfce566592264a9db6887e5b172566" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>ferrers</name></member>
-      <member refid="class_ellipsoid_force_1ad874304164b322fe14b3e4493f256b1b" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>getDens</name></member>
-      <member refid="class_ellipsoid_force_1a9253e11731aa1384877d61f795bf2870" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>getPotl</name></member>
-      <member refid="class_ellipsoid_force_1ab578edab3c3c4dbafdb2ccfd2f5285eb" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>getPotl</name></member>
-      <member refid="class_ellipsoid_force_1acc1c5319988e189de2b06d05ca788a42" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>getSurfDens</name></member>
-      <member refid="class_ellipsoid_force_1a23972693c77d7108c28d7453a46f31ac" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>gq</name></member>
-      <member refid="class_ellipsoid_force_1accd0c55a8cb132fd1adc35d5681c4fd7" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>gt</name></member>
-      <member refid="class_ellipsoid_force_1a2ad1c934f94eb4ab1e5fb423be989393" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>gz</name></member>
-      <member refid="class_ellipsoid_force_1a0eba638deb6df34b1373545a8663e313" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>ldr</name></member>
-      <member refid="class_ellipsoid_force_1a6d1c8139fa11ddbd42f7f88da690698c" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>lrmax</name></member>
-      <member refid="class_ellipsoid_force_1a4567e38d084ab6ec22a051a3e22aaed9" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>lrmin</name></member>
-      <member refid="class_ellipsoid_force_1a26363e415fec56f09cfaecf8fd035263" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>MakeTable</name></member>
-      <member refid="class_ellipsoid_force_1a689411849d9f025f586d9f06c0b220dd" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>mass</name></member>
-      <member refid="class_ellipsoid_force_1aa42079cab4f8cd532947ac1ac3804fa2" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>MassInertia</name></member>
-      <member refid="class_ellipsoid_force_1a718e3a7cf7980f0cb764ab12616f96a4" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>mm</name></member>
-      <member refid="class_ellipsoid_force_1afd80d8b372cdae25498bb011846371f1" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>N</name></member>
-      <member refid="class_ellipsoid_force_1a455ba8fcaa1b3a8e95a31c2757a07abf" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>n</name></member>
-      <member refid="class_ellipsoid_force_1a29b6c722d878a52fe531e25276c3ef9c" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>nindx</name></member>
-      <member refid="class_ellipsoid_force_1ad9d58ce422aa5faf1e3dd3efcb245ab7" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>ntab</name></member>
-      <member refid="class_ellipsoid_force_1aa8fa477ca941c463835d5d29d8641fa3" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>num</name></member>
-      <member refid="class_ellipsoid_force_1ac090ea97bcb5b27be3fc0dfcee12c93e" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>numr</name></member>
-      <member refid="class_ellipsoid_force_1accbdb1be0c8442d1f6aaed133fb4856f" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>param</name></member>
-      <member refid="class_ellipsoid_force_1a85cb3c851611f9a5dadbfcfa3a44e33ca84e8fea4a2ad4b12273a99a4583de446" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>powerlaw</name></member>
-      <member refid="class_ellipsoid_force_1a3a42ee569536aef17aa2204c883f6beb" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>pp</name></member>
-      <member refid="class_ellipsoid_force_1acef730680da86abf64b745775abd293f" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>quadpot</name></member>
-      <member refid="class_ellipsoid_force_1a3e4dbe4b126d907ee37dde4d7a4a2051" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>quadr</name></member>
-      <member refid="class_ellipsoid_force_1a887b34511d45251c665526504913c981" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>read_cache</name></member>
-      <member refid="class_ellipsoid_force_1a47dc093c9a6f0b656ea28b8e094feb48" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>rho0</name></member>
-      <member refid="class_ellipsoid_force_1a0439ca49090c9610d5c33840a54cf4cb" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>RhoBar</name></member>
-      <member refid="class_ellipsoid_force_1a525a4f889a4aabbcceca35d8b780efef" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>rmax</name></member>
-      <member refid="class_ellipsoid_force_1aff5954ab3dc083491905305605e6faa4" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>rmin</name></member>
-      <member refid="class_ellipsoid_force_1aff7af98e24b0b60c2355f4abb33f1732" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>rr</name></member>
-      <member refid="class_ellipsoid_force_1adf42fdda12ee0c8ed288b9c30f032512" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>rtmax</name></member>
-      <member refid="class_ellipsoid_force_1ae07060728b825fe672bb2269a4ec1691" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>rtmin</name></member>
-      <member refid="class_ellipsoid_force_1a854dc7fcdf30ecab642b919edc74bd74" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>solve</name></member>
-      <member refid="class_ellipsoid_force_1a5190bd267391b0fcd1b8d2248651a03b" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>table</name></member>
-      <member refid="class_ellipsoid_force_1a66357eba0662d46d5ce1f4f016e2cd77" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>TableEval</name></member>
-      <member refid="class_ellipsoid_force_1aa1e7a78ae0b203ff8565ce5ddd8979b0" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>tlog</name></member>
-      <member refid="class_ellipsoid_force_1a44c1dc0cb03fc9815e471f7b7c6cc2ec" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>tmade</name></member>
-      <member refid="class_ellipsoid_force_1a9437c95881b78c60412c6b42c4fc1aca" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>U22</name></member>
-      <member refid="class_ellipsoid_force_1a414904096eebce2d3025f7886d7650dd" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>uu</name></member>
-      <member refid="class_ellipsoid_force_1a583ee6f260aa6b1c31c911786b7114b4" prot="private" virt="non-virtual"><scope>EllipsoidForce</scope><name>write_cache</name></member>
-      <member refid="class_ellipsoid_force_1a120074a67c9ab1b47c6a05f1cd93c450" prot="public" virt="non-virtual"><scope>EllipsoidForce</scope><name>~EllipsoidForce</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_embedded_disk_model.xml b/doxyxml/class_embedded_disk_model.xml
deleted file mode 100644
index 7ee50d3..0000000
--- a/doxyxml/class_embedded_disk_model.xml
+++ /dev/null
@@ -1,791 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_embedded_disk_model" kind="class" language="C++" prot="public">
-    <compoundname>EmbeddedDiskModel</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_embedded_disk_model_1a305e72fa2bf96219c22bf3fe60be53ea" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_q_p_dist_f" kindref="compound">QPDistF</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;QPDistF&gt; EmbeddedDiskModel::df</definition>
-        <argsstring></argsstring>
-        <name>df</name>
-        <qualifiedname>EmbeddedDiskModel::df</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="277" column="19" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="277" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_embedded_disk_model_1af7ea75e1ee4bb4f445cb73aef8bd1db6" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmbeddedDiskModel::m_scale</definition>
-        <argsstring></argsstring>
-        <name>m_scale</name>
-        <qualifiedname>EmbeddedDiskModel::m_scale</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="271" column="15" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="271" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_embedded_disk_model_1a8cd2eda102d370ea71686d5d29f87c35" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int EmbeddedDiskModel::number</definition>
-        <argsstring></argsstring>
-        <name>number</name>
-        <qualifiedname>EmbeddedDiskModel::number</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="273" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="273" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_embedded_disk_model_1a13be365db0b8ec677925da151c9c1925" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmbeddedDiskModel::r_scale</definition>
-        <argsstring></argsstring>
-        <name>r_scale</name>
-        <qualifiedname>EmbeddedDiskModel::r_scale</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="272" column="15" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="272" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_embedded_disk_model_1a013a9cf3680cd4312e8c87eb6fedc940" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::rmax</definition>
-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>EmbeddedDiskModel::rmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="275" column="15" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="275" bodyend="-1"/>
-        <referencedby refid="class_embedded_disk_model_1ad0b95260439369297ff2477923a26f02" compoundref="massmodel_8_h" startline="305" endline="305">get_max_radius</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_embedded_disk_model_1a741b14e7a7660a9bff0ea1d4b8740a85" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::rmin</definition>
-        <argsstring></argsstring>
-        <name>rmin</name>
-        <qualifiedname>EmbeddedDiskModel::rmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="275" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="275" bodyend="-1"/>
-        <referencedby refid="class_embedded_disk_model_1a8f2ea37fe3204aa4b0007550d16502c8" compoundref="massmodel_8_h" startline="304" endline="304">get_min_radius</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_embedded_disk_model_1a60259225298ae2b78f06eb1069913894" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt; &gt;</type>
-        <definition>std::vector&lt;std::shared_ptr&lt;AxiSymModel&gt; &gt; EmbeddedDiskModel::t</definition>
-        <argsstring></argsstring>
-        <name>t</name>
-        <qualifiedname>EmbeddedDiskModel::t</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="270" column="15" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="270" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_embedded_disk_model_1ae4147a269a409ebc897970fd781d1f69" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::d2fde2</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>d2fde2</name>
-        <qualifiedname>EmbeddedDiskModel::d2fde2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a12d39568c81a72b9e3ea2277816d05f9">d2fde2</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="322" column="10"/>
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-      <memberdef kind="function" id="class_embedded_disk_model_1a526648e3e521b7e20c849ee946e1c9bc" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::dfde</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfde</name>
-        <qualifiedname>EmbeddedDiskModel::dfde</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a2978a19f299f41fdea7e3cefc1164e3a">dfde</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="320" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_embedded_disk_model_1ab602c8ab25b558773b02c597f9e893ea" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::dfdl</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfdl</name>
-        <qualifiedname>EmbeddedDiskModel::dfdl</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a120cec5af54e43d727f83df8678cc93b">dfdl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="321" column="10"/>
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-        <type>double</type>
-        <definition>double EmbeddedDiskModel::distf</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>distf</name>
-        <qualifiedname>EmbeddedDiskModel::distf</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a5530c3612f1c09c6c77401a9e21550b8">distf</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="319" column="10"/>
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-      <memberdef kind="function" id="class_embedded_disk_model_1a3d5457b4263c763c7155d39457ea686c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>EmbeddedDiskModel::EmbeddedDiskModel</definition>
-        <argsstring>(std::vector&lt; std::shared_ptr&lt; AxiSymModel &gt; &gt; &amp;T, std::vector&lt; double &gt; &amp;M_scale, std::vector&lt; double &gt; &amp;R_scale, int NUMBER)</argsstring>
-        <name>EmbeddedDiskModel</name>
-        <qualifiedname>EmbeddedDiskModel::EmbeddedDiskModel</qualifiedname>
-        <param>
-          <type>std::vector&lt; std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt; &gt; &amp;</type>
-          <declname>T</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>M_scale</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>R_scale</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>NUMBER</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="280" column="3"/>
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-      <memberdef kind="function" id="class_embedded_disk_model_1a5c763b865ff6b4caeb10eac78e753195" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::get_density</definition>
-        <argsstring>(const double x1, const double x2, const double x3)</argsstring>
-        <name>get_density</name>
-        <qualifiedname>EmbeddedDiskModel::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc">get_density</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The density at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="296" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="296" bodyend="297"/>
-        <references refid="class_embedded_disk_model_1a3ffbd7a622f73cfe9b67ffae80cfed7f">get_density</references>
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-      <memberdef kind="function" id="class_embedded_disk_model_1a3ffbd7a622f73cfe9b67ffae80cfed7f" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double EmbeddedDiskModel::get_density</definition>
-        <argsstring>(const double)</argsstring>
-        <name>get_density</name>
-        <qualifiedname>EmbeddedDiskModel::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="287" column="18"/>
-        <referencedby refid="class_embedded_disk_model_1a5c763b865ff6b4caeb10eac78e753195" compoundref="massmodel_8_h" startline="296" endline="297">get_density</referencedby>
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-      <memberdef kind="function" id="class_embedded_disk_model_1a2d94fa2b784f522685eac97b24814511" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double EmbeddedDiskModel::get_dpot</definition>
-        <argsstring>(const double)</argsstring>
-        <name>get_dpot</name>
-        <qualifiedname>EmbeddedDiskModel::get_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845">get_dpot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="289" column="18"/>
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-      <memberdef kind="function" id="class_embedded_disk_model_1a6f1261707e304ed949152834f9d0546d" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double EmbeddedDiskModel::get_dpot2</definition>
-        <argsstring>(const double)</argsstring>
-        <name>get_dpot2</name>
-        <qualifiedname>EmbeddedDiskModel::get_dpot2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a77b9bb693457557d379167ca0ca2caae">get_dpot2</reimplements>
-        <param>
-          <type>const double</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="290" column="18"/>
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-      <memberdef kind="function" id="class_embedded_disk_model_1af5bbd571cbf33b33a467787f0573dd86" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::get_mass</definition>
-        <argsstring>(const double x1, const double x2, const double x3)</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>EmbeddedDiskModel::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787">get_mass</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get the mass inside of position (x, y, z) (this is ambiguous in general and will depend on the model) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="293" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="293" bodyend="294"/>
-        <references refid="class_embedded_disk_model_1ad924cd677753a5086cb9a732141b6890">get_mass</references>
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-        <type>double</type>
-        <definition>virtual double EmbeddedDiskModel::get_mass</definition>
-        <argsstring>(const double)</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>EmbeddedDiskModel::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465">get_mass</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>Access the profile. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="286" column="18"/>
-        <referencedby refid="class_embedded_disk_model_1af5bbd571cbf33b33a467787f0573dd86" compoundref="massmodel_8_h" startline="293" endline="294">get_mass</referencedby>
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-      <memberdef kind="function" id="class_embedded_disk_model_1ad0b95260439369297ff2477923a26f02" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::get_max_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_max_radius</name>
-        <qualifiedname>EmbeddedDiskModel::get_max_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a87510a095e6b9533812eba57c7ca862c">get_max_radius</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="305" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="305" bodyend="305"/>
-        <references refid="class_embedded_disk_model_1a013a9cf3680cd4312e8c87eb6fedc940" compoundref="massmodel_8_h" startline="275">rmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_embedded_disk_model_1a8f2ea37fe3204aa4b0007550d16502c8" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::get_min_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_min_radius</name>
-        <qualifiedname>EmbeddedDiskModel::get_min_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab304897a450a2d79f4e27841526b70e9">get_min_radius</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="304" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="304" bodyend="304"/>
-        <references refid="class_embedded_disk_model_1a741b14e7a7660a9bff0ea1d4b8740a85" compoundref="massmodel_8_h" startline="275">rmin</references>
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-      <memberdef kind="function" id="class_embedded_disk_model_1a4cd777af4aeb22c21232eeb6bdae8ceb" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double EmbeddedDiskModel::get_pot</definition>
-        <argsstring>(const double x1, const double x2, const double x3)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>EmbeddedDiskModel::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The potential at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="299" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="299" bodyend="300"/>
-        <references refid="class_embedded_disk_model_1adcae86dad89afdc7dc8fd5b47ee61341">get_pot</references>
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-        <type>double</type>
-        <definition>virtual double EmbeddedDiskModel::get_pot</definition>
-        <argsstring>(const double)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>EmbeddedDiskModel::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="288" column="18"/>
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-        <type>void</type>
-        <definition>virtual void EmbeddedDiskModel::get_pot_dpot</definition>
-        <argsstring>(const double, double &amp;, double &amp;)</argsstring>
-        <name>get_pot_dpot</name>
-        <qualifiedname>EmbeddedDiskModel::get_pot_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a4fc766458a1f45b3ece0410b2c85b632">get_pot_dpot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="291" column="16"/>
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-        <type>void</type>
-        <definition>void EmbeddedDiskModel::save_df</definition>
-        <argsstring>(string &amp;file)</argsstring>
-        <name>save_df</name>
-        <qualifiedname>EmbeddedDiskModel::save_df</qualifiedname>
-        <param>
-          <type>string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="323" column="10"/>
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-        <type>void</type>
-        <definition>void EmbeddedDiskModel::setup_df</definition>
-        <argsstring>(int egrid=10, int kgrid=5, int mgrid=20, double lambda=0.0, double alpha=-6.0, double beta=1.0, double gama=1.0, double sigma=2.0, double rmmax=-1, double roff=0.05, double eoff=0.5, double koff=0.5, double kmin=0.0, double kmax=1.0, int nint=20, int numt=20)</argsstring>
-        <name>setup_df</name>
-        <qualifiedname>EmbeddedDiskModel::setup_df</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>egrid</declname>
-          <defval>10</defval>
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-        <param>
-          <type>int</type>
-          <declname>kgrid</declname>
-          <defval>5</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mgrid</declname>
-          <defval>20</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>lambda</declname>
-          <defval>0.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>alpha</declname>
-          <defval>-6.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>beta</declname>
-          <defval>1.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>gama</declname>
-          <defval>1.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>sigma</declname>
-          <defval>2.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmmax</declname>
-          <defval>-1</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>roff</declname>
-          <defval>0.05</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>eoff</declname>
-          <defval>0.5</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>koff</declname>
-          <defval>0.5</defval>
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-        <param>
-          <type>double</type>
-          <declname>kmin</declname>
-          <defval>0.0</defval>
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-        <param>
-          <type>double</type>
-          <declname>kmax</declname>
-          <defval>1.0</defval>
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-        <param>
-          <type>int</type>
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-          <defval>20</defval>
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-        <param>
-          <type>int</type>
-          <declname>numt</declname>
-          <defval>20</defval>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="307" column="8"/>
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-        <type>void</type>
-        <definition>void EmbeddedDiskModel::setup_df</definition>
-        <argsstring>(string &amp;file)</argsstring>
-        <name>setup_df</name>
-        <qualifiedname>EmbeddedDiskModel::setup_df</qualifiedname>
-        <param>
-          <type>string &amp;</type>
-          <declname>file</declname>
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-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="316" column="8"/>
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-        <type>void</type>
-        <definition>void EmbeddedDiskModel::verbose_df</definition>
-        <argsstring>(void)</argsstring>
-        <name>verbose_df</name>
-        <qualifiedname>EmbeddedDiskModel::verbose_df</qualifiedname>
-        <param>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="318" column="10"/>
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-        <type></type>
-        <definition>virtual EmbeddedDiskModel::~EmbeddedDiskModel</definition>
-        <argsstring>()</argsstring>
-        <name>~EmbeddedDiskModel</name>
-        <qualifiedname>EmbeddedDiskModel::~EmbeddedDiskModel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="284" column="11"/>
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-      <node id="2">
-        <label>AxiSymModel</label>
-        <link refid="class_axi_sym_model"/>
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-        </childnode>
-        <childnode refid="4" relation="public-inheritance">
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-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
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-      <node id="3">
-        <label>MassModel</label>
-        <link refid="class_mass_model"/>
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-      <node id="4">
-        <label>std::enable_shared_from_this&lt; AxiSymModel &gt;</label>
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-        </childnode>
-        <childnode refid="4" relation="public-inheritance">
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-        <childnode refid="5" relation="usage">
-          <edgelabel>gen_orb</edgelabel>
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-        <label>EmbeddedDiskModel</label>
-        <link refid="class_embedded_disk_model"/>
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-        </childnode>
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-        <label>GaussQuad</label>
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-        <label>MassModel</label>
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-      </node>
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-        <label>RegularOrbit</label>
-        <link refid="class_regular_orbit"/>
-      </node>
-      <node id="5">
-        <label>SphericalOrbit</label>
-        <link refid="class_spherical_orbit"/>
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-        <childnode refid="7" relation="usage">
-          <edgelabel>angle_grid</edgelabel>
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-        <childnode refid="8" relation="usage">
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-      </node>
-    </collaborationgraph>
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diff --git a/doxyxml/class_emp_cyl2d.xml b/doxyxml/class_emp_cyl2d.xml
deleted file mode 100644
index f927e73..0000000
--- a/doxyxml/class_emp_cyl2d.xml
+++ /dev/null
@@ -1,1152 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_emp_cyl2d" kind="class" language="C++" prot="public">
-    <compoundname>EmpCyl2d</compoundname>
-    <includes refid="_emp_cyl2d_8_h" local="no">EmpCyl2d.H</includes>
-    <innerclass refid="class_emp_cyl2d_1_1_basis2d" prot="protected">EmpCyl2d::Basis2d</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_expon_cyl" prot="public">EmpCyl2d::ExponCyl</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_kuzmin_cyl" prot="public">EmpCyl2d::KuzminCyl</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_mapping" prot="public">EmpCyl2d::Mapping</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_mestel_cyl" prot="public">EmpCyl2d::MestelCyl</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_model_cyl" prot="public">EmpCyl2d::ModelCyl</innerclass>
-    <innerclass refid="class_emp_cyl2d_1_1_zang_cyl" prot="public">EmpCyl2d::ZangCyl</innerclass>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_emp_cyl2d_1ab0e5c03e30a56cdba86aa199b1af8cb7" prot="protected" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_emp_cyl2d_1_1_basis2d" kindref="compound">Basis2d</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;Basis2d&gt; EmpCyl2d::basis</definition>
-        <argsstring></argsstring>
-        <name>basis</name>
-        <qualifiedname>EmpCyl2d::basis</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="404" column="20" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="404" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl2d_1a799dfcc0ca132249ec29aebccb411bc4" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCyl2d::basis_test</definition>
-        <argsstring></argsstring>
-        <name>basis_test</name>
-        <qualifiedname>EmpCyl2d::basis_test</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="373" column="18" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="373" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1a76c54f44a8d14c3fe17562494a2dcc40" compoundref="_emp_cyl2d_8_h" startline="451" endline="451">basisTest</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl2d_1a722d7398a7cd2d4ff9ed78663c6ec9c9" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string EmpCyl2d::biorth</definition>
-        <argsstring></argsstring>
-        <name>biorth</name>
-        <qualifiedname>EmpCyl2d::biorth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="372" column="21" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="372" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1ac3e08ffeb77e92616a2cfa1cf748f3e2" compoundref="_emp_cyl2d_8_h" startline="503" endline="503">getBiorthName</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl2d_1a1e0b8bab39d8578da97fb09e052bf996" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string EmpCyl2d::cache_name_2d</definition>
-        <argsstring></argsstring>
-        <name>cache_name_2d</name>
-        <qualifiedname>EmpCyl2d::cache_name_2d</qualifiedname>
-        <briefdescription>
-<para>The cache file name. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="431" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="431" bodyend="-1"/>
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-        <type>bool</type>
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-        <argsstring></argsstring>
-        <name>cmap</name>
-        <qualifiedname>EmpCyl2d::cmap</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <name>disk</name>
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-        <definition>std::vector&lt;Eigen::MatrixXd&gt; EmpCyl2d::dpot_array</definition>
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-        <name>dpot_array</name>
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-        <name>dxi</name>
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-        <type>int</type>
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-        <name>knots</name>
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-        <type>bool</type>
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-        <name>logr</name>
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-        <type><ref refid="class_emp_cyl2d_1_1_mapping" kindref="compound">Mapping</ref></type>
-        <definition>Mapping EmpCyl2d::map</definition>
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-<para><ref refid="class_emp_cyl2d_1_1_mapping" kindref="compound">Mapping</ref> instance. </para>
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-        <referencedby refid="class_emp_cyl2d_1a44acdc5f9a2dddff075be3a63f0fa0f0" compoundref="_emp_cyl2d_8_h" startline="497" endline="497">getMapping</referencedby>
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-        <type>int</type>
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-        <referencedby refid="class_emp_cyl2d_1ab6732d5c1869669061e583214a93bb2a" compoundref="_emp_cyl2d_8_h" startline="500" endline="500">getModelName</referencedby>
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-<para>Contains parameter database. </para>
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-        <type>std::tuple&lt; int, int, double, double &gt;</type>
-        <definition>std::tuple&lt; int, int, double, double &gt; EmpCyl2d::linear_interp</definition>
-        <argsstring>(double r)</argsstring>
-        <name>linear_interp</name>
-        <qualifiedname>EmpCyl2d::linear_interp</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Interpolation helpers. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>bool</type>
-        <definition>bool EmpCyl2d::ReadH5Cache</definition>
-        <argsstring>()</argsstring>
-        <name>ReadH5Cache</name>
-        <qualifiedname>EmpCyl2d::ReadH5Cache</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="412" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1a514e73e00f42cb61189cae8857069274" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCyl2d::WriteH5Cache</definition>
-        <argsstring>()</argsstring>
-        <name>WriteH5Cache</name>
-        <qualifiedname>EmpCyl2d::WriteH5Cache</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="413" column="8"/>
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-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_emp_cyl2d_1a76c54f44a8d14c3fe17562494a2dcc40" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCyl2d::basisTest</definition>
-        <argsstring>(bool which)</argsstring>
-        <name>basisTest</name>
-        <qualifiedname>EmpCyl2d::basisTest</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>which</declname>
-        </param>
-        <briefdescription>
-<para>Use underlying basis for testing? Default: false. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="451" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="451" bodyend="451"/>
-        <references refid="class_emp_cyl2d_1a799dfcc0ca132249ec29aebccb411bc4" compoundref="_emp_cyl2d_8_h" startline="373">basis_test</references>
-      </memberdef>
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-        <type>void</type>
-        <definition>void EmpCyl2d::checkCoefs</definition>
-        <argsstring>()</argsstring>
-        <name>checkCoefs</name>
-        <qualifiedname>EmpCyl2d::checkCoefs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Check the coefficients of the EOF basis against the zeroth-order model </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="485" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1af9581cde255fa3fc6d9168b2d2381b22" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>EmpCyl2d::EmpCyl2d</definition>
-        <argsstring>()</argsstring>
-        <name>EmpCyl2d</name>
-        <qualifiedname>EmpCyl2d::EmpCyl2d</qualifiedname>
-        <briefdescription>
-<para>Null constructor (for copy construct) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="436" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="436" bodyend="436"/>
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-        <type></type>
-        <definition>EmpCyl2d::EmpCyl2d</definition>
-        <argsstring>(int mmax, int nmaxfid, int nmax, int knots, int numr, double rmin, double rmax, double scale, bool cmap, bool logr, const YAML::Node &amp;P, const std::string biorth, const std::string cache=&quot;&quot;)</argsstring>
-        <name>EmpCyl2d</name>
-        <qualifiedname>EmpCyl2d::EmpCyl2d</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmaxfid</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>knots</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>scale</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>cmap</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>logr</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>P</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>biorth</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>cache</declname>
-          <defval>&quot;&quot;</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="439" column="3"/>
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-        <type></type>
-        <definition>EmpCyl2d::EmpCyl2d</definition>
-        <argsstring>(int mmax, int nmaxfid, int nmax, int knots, int numr, double rmin, double rmax, double scale, bool cmap, bool logr, std::shared_ptr&lt; ModelCyl &gt; disk, const std::string biorth, const std::string cache=&quot;&quot;)</argsstring>
-        <name>EmpCyl2d</name>
-        <qualifiedname>EmpCyl2d::EmpCyl2d</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmaxfid</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>knots</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>scale</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>cmap</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>logr</declname>
-        </param>
-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_emp_cyl2d_1_1_model_cyl" kindref="compound">ModelCyl</ref> &gt;</type>
-          <declname>disk</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>biorth</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>cache</declname>
-          <defval>&quot;&quot;</defval>
-        </param>
-        <briefdescription>
-<para>Constructor with user-supplied target model. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="445" column="3"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1a917dfe4aece2571715a3dd216943203e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCyl2d::get_dens</definition>
-        <argsstring>(double r, int M, int N)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>EmpCyl2d::get_dens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Linear interpolate on grid to get density value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="457" column="10"/>
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-        <type>void</type>
-        <definition>void EmpCyl2d::get_dens</definition>
-        <argsstring>(Eigen::MatrixXd &amp;mat, double r)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>EmpCyl2d::get_dens</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>mat</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="465" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1a8ebcf2237094e2912d4f21e486eac9e1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCyl2d::get_dpot</definition>
-        <argsstring>(double r, int M, int N)</argsstring>
-        <name>get_dpot</name>
-        <qualifiedname>EmpCyl2d::get_dpot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Linear interpolate on grid to get potential gradient (-force) value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="460" column="10"/>
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-        <type>void</type>
-        <definition>void EmpCyl2d::get_force</definition>
-        <argsstring>(Eigen::MatrixXd &amp;mat, double r)</argsstring>
-        <name>get_force</name>
-        <qualifiedname>EmpCyl2d::get_force</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>mat</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="466" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1a324215c0a67e42db53e6c8d61f04d7c2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCyl2d::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;mat, double r)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>EmpCyl2d::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>mat</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Matrix evaluation members. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="464" column="8"/>
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-        <type>double</type>
-        <definition>double EmpCyl2d::get_potl</definition>
-        <argsstring>(double r, int M, int N)</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>EmpCyl2d::get_potl</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Linear interpolate on grid to get potential value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="454" column="10"/>
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-        <type>const std::string</type>
-        <definition>const std::string EmpCyl2d::getBiorthName</definition>
-        <argsstring>()</argsstring>
-        <name>getBiorthName</name>
-        <qualifiedname>EmpCyl2d::getBiorthName</qualifiedname>
-        <briefdescription>
-<para>Get biorthogonal function base name. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <referencedby refid="class_biorth_cyl_1a401d15299b43648f8792b6743b8f1435" compoundref="_biorth_cyl_8_h" startline="226" endline="226">BiorthCyl::getBiorthName</referencedby>
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-        <type><ref refid="class_emp_cyl2d_1_1_mapping" kindref="compound">Mapping</ref></type>
-        <definition>Mapping EmpCyl2d::getMapping</definition>
-        <argsstring>()</argsstring>
-        <name>getMapping</name>
-        <qualifiedname>EmpCyl2d::getMapping</qualifiedname>
-        <briefdescription>
-<para>Get coordinate mapping object. </para>
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-        <detaileddescription>
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-        <references refid="class_emp_cyl2d_1a32de18cb6d3f0366104a564c62d02ed4" compoundref="_emp_cyl2d_8_h" startline="409">map</references>
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-        <type>const std::string</type>
-        <definition>const std::string EmpCyl2d::getModelName</definition>
-        <argsstring>()</argsstring>
-        <name>getModelName</name>
-        <qualifiedname>EmpCyl2d::getModelName</qualifiedname>
-        <briefdescription>
-<para>Get model name. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <references refid="class_emp_cyl2d_1aff08124c9b5ae900ef2873a36c5e8e1f" compoundref="_emp_cyl2d_8_h" startline="372">model</references>
-        <referencedby refid="class_biorth_cyl_1abd8af7a03b4d60241e0a50e6de166c3e" compoundref="_biorth_cyl_8_h" startline="223" endline="223">BiorthCyl::getModelName</referencedby>
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-        <type>double</type>
-        <definition>double EmpCyl2d::getRmax</definition>
-        <argsstring>()</argsstring>
-        <name>getRmax</name>
-        <qualifiedname>EmpCyl2d::getRmax</qualifiedname>
-        <briefdescription>
-<para>Access the maximum radius. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="491" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="491" bodyend="491"/>
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-        <type>double</type>
-        <definition>double EmpCyl2d::getRmin</definition>
-        <argsstring>()</argsstring>
-        <name>getRmin</name>
-        <qualifiedname>EmpCyl2d::getRmin</qualifiedname>
-        <briefdescription>
-<para>Access the minimum radius. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_emp_cyl2d_1a7827001d015ae29f5aa92848ead53f5f" compoundref="_emp_cyl2d_8_h" startline="369">rmin</references>
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-        <type>bool</type>
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-        <argsstring>()</argsstring>
-        <name>operator()</name>
-        <qualifiedname>EmpCyl2d::operator()</qualifiedname>
-        <briefdescription>
-<para>Check for configuration. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_emp_cyl2d_1a894d179901c70002f3ea3287c0007f08" compoundref="_emp_cyl2d_8_h" startline="373">configured</references>
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-      <memberdef kind="function" id="class_emp_cyl2d_1a43e01112e8e552742158f64337b1e2af" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt; Eigen::MatrixXd &gt; EmpCyl2d::orthoCheck</definition>
-        <argsstring>()</argsstring>
-        <name>orthoCheck</name>
-        <qualifiedname>EmpCyl2d::orthoCheck</qualifiedname>
-        <briefdescription>
-<para>Return an array of inner-product matrices for the EOF basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="481" column="15"/>
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-        <type>void</type>
-        <definition>void EmpCyl2d::orthoCheck</definition>
-        <argsstring>(int M, const std::string &amp;file)</argsstring>
-        <name>orthoCheck</name>
-        <qualifiedname>EmpCyl2d::orthoCheck</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Write the inner-product matrix for the EOF basis for a particular azimuthal M value to a file </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="478" column="8"/>
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-        <type>void</type>
-        <definition>void EmpCyl2d::writeBasis</definition>
-        <argsstring>(int M, const std::string &amp;file)</argsstring>
-        <name>writeBasis</name>
-        <qualifiedname>EmpCyl2d::writeBasis</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
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-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
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-        <briefdescription>
-<para>Write the basis for a partcular azimuthal M value to a file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="470" column="8"/>
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-        <type>void</type>
-        <definition>void EmpCyl2d::writeTrans</definition>
-        <argsstring>(int M, const std::string &amp;file)</argsstring>
-        <name>writeTrans</name>
-        <qualifiedname>EmpCyl2d::writeTrans</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
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-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Write the eigenvector rotation matrix for a partcular azimuthal M value to a file </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="474" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>A class that implements most of the members for an Exp force routine </para>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="1">
-        <label>EmpCyl2d</label>
-        <link refid="class_emp_cyl2d"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>map</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>EmpCyl2d::Mapping</label>
-        <link refid="class_emp_cyl2d_1_1_mapping"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="29" column="1" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="30" bodyend="505"/>
-    <listofallmembers>
-      <member refid="class_emp_cyl2d_1ab0e5c03e30a56cdba86aa199b1af8cb7" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>basis</name></member>
-      <member refid="class_emp_cyl2d_1a799dfcc0ca132249ec29aebccb411bc4" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>basis_test</name></member>
-      <member refid="class_emp_cyl2d_1a76c54f44a8d14c3fe17562494a2dcc40" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>basisTest</name></member>
-      <member refid="class_emp_cyl2d_1a722d7398a7cd2d4ff9ed78663c6ec9c9" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>biorth</name></member>
-      <member refid="class_emp_cyl2d_1a1e0b8bab39d8578da97fb09e052bf996" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>cache_name_2d</name></member>
-      <member refid="class_emp_cyl2d_1aeae06b336f4325934f1d1956bd234d00" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>checkCoefs</name></member>
-      <member refid="class_emp_cyl2d_1ac2d64888010aae79a0b505e46551bbe4" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>checkMN</name></member>
-      <member refid="class_emp_cyl2d_1aeb2fbcb6010dc78fe3e3f186cde372a9" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>cmap</name></member>
-      <member refid="class_emp_cyl2d_1a894d179901c70002f3ea3287c0007f08" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>configured</name></member>
-      <member refid="class_emp_cyl2d_1aefdd4dab54583e2f99e121b088de2e02" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>create_tables</name></member>
-      <member refid="class_emp_cyl2d_1add20591d92d3e8deb4c4693510fb4668" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>createModel</name></member>
-      <member refid="class_emp_cyl2d_1a7eabba734e4255f726d27b18e57f6fbd" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>default_cache_name</name></member>
-      <member refid="class_emp_cyl2d_1afe18203b85a4253cf06b2418328ca0dc" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>dens_array</name></member>
-      <member refid="class_emp_cyl2d_1aa4435e8994dcdaf805e416ae12038557" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>disk</name></member>
-      <member refid="class_emp_cyl2d_1ab562ff93bc6447bc31d905edf3c9dde0" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>dpot_array</name></member>
-      <member refid="class_emp_cyl2d_1a45ae32ac42d9f74d2a0b27213fbaf52b" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>dxi</name></member>
-      <member refid="class_emp_cyl2d_1af9581cde255fa3fc6d9168b2d2381b22" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>EmpCyl2d</name></member>
-      <member refid="class_emp_cyl2d_1ab642280e8a6d18a4d71c51700425c8df" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>EmpCyl2d</name></member>
-      <member refid="class_emp_cyl2d_1a48ac0eda97ae5025f35eceeafe2335a5" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>EmpCyl2d</name></member>
-      <member refid="class_emp_cyl2d_1a917dfe4aece2571715a3dd216943203e" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>get_dens</name></member>
-      <member refid="class_emp_cyl2d_1a49efdfc87d6db745996f0e5082a93914" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>get_dens</name></member>
-      <member refid="class_emp_cyl2d_1a8ebcf2237094e2912d4f21e486eac9e1" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>get_dpot</name></member>
-      <member refid="class_emp_cyl2d_1add9a31b0b9becabff604695cc688932c" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>get_force</name></member>
-      <member refid="class_emp_cyl2d_1a324215c0a67e42db53e6c8d61f04d7c2" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>get_pot</name></member>
-      <member refid="class_emp_cyl2d_1a7f828a74ed264276c3214679a77763b4" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>get_potl</name></member>
-      <member refid="class_emp_cyl2d_1ac3e08ffeb77e92616a2cfa1cf748f3e2" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>getBiorthName</name></member>
-      <member refid="class_emp_cyl2d_1a44acdc5f9a2dddff075be3a63f0fa0f0" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>getMapping</name></member>
-      <member refid="class_emp_cyl2d_1ab6732d5c1869669061e583214a93bb2a" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>getModelName</name></member>
-      <member refid="class_emp_cyl2d_1ac9ddd679d2071b64edcaf54d43b8b5bd" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>getRmax</name></member>
-      <member refid="class_emp_cyl2d_1a748053549fc20ebecf3b6417cfc5630d" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>getRmin</name></member>
-      <member refid="class_emp_cyl2d_1a88cfb80d74560dcf00c0f861c6eb0e0b" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>hmagic</name></member>
-      <member refid="class_emp_cyl2d_1a395b4ae2370f18b042e5fa8f6459fdd2" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>knots</name></member>
-      <member refid="class_emp_cyl2d_1a233d8da77204244b57df3d0338e09281" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>linear_interp</name></member>
-      <member refid="class_emp_cyl2d_1a9e0a423a2001bbe311d61fd84687551a" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>logr</name></member>
-      <member refid="class_emp_cyl2d_1a32de18cb6d3f0366104a564c62d02ed4" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>map</name></member>
-      <member refid="class_emp_cyl2d_1a2cd4e321747f715a884068126067e94c" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>mmax</name></member>
-      <member refid="class_emp_cyl2d_1aff08124c9b5ae900ef2873a36c5e8e1f" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>model</name></member>
-      <member refid="class_emp_cyl2d_1a4420b46de42622236236210640bd5156" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>nmax</name></member>
-      <member refid="class_emp_cyl2d_1ac1bc05ce378bca56ceb77e7fbbee68de" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>nmaxfid</name></member>
-      <member refid="class_emp_cyl2d_1af573bb26ae59ac054b667c76041e07b4" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>numr</name></member>
-      <member refid="class_emp_cyl2d_1a09b9797b1650a7f37a714a14c242b937" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>operator()</name></member>
-      <member refid="class_emp_cyl2d_1af3394365c2151065cc8b165288017a96" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>orthoCheck</name></member>
-      <member refid="class_emp_cyl2d_1a43e01112e8e552742158f64337b1e2af" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>orthoCheck</name></member>
-      <member refid="class_emp_cyl2d_1a01bb476da94c7d55ab449a78f23382f6" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>Params</name></member>
-      <member refid="class_emp_cyl2d_1a0f5bfc9472480f146893e2ded214006c" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>potl_array</name></member>
-      <member refid="class_emp_cyl2d_1ad6006930a078d5b2d262f5de7e80aa7e" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>ReadH5Cache</name></member>
-      <member refid="class_emp_cyl2d_1a90732371052f084e699ffc4d64b2be04" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>rmax</name></member>
-      <member refid="class_emp_cyl2d_1a7827001d015ae29f5aa92848ead53f5f" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>rmin</name></member>
-      <member refid="class_emp_cyl2d_1aba1d590dc62ef3feb07e63ff2a5a2c1d" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>rot_matrix</name></member>
-      <member refid="class_emp_cyl2d_1a10793f785f2a8b413ff7e69845e99ac7" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>scale</name></member>
-      <member refid="class_emp_cyl2d_1a8c9c878a19ea4aab1ecb3357efdc5d0e" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>Version</name></member>
-      <member refid="class_emp_cyl2d_1a9d5a136698db5daa5472d7c596600dee" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>writeBasis</name></member>
-      <member refid="class_emp_cyl2d_1a514e73e00f42cb61189cae8857069274" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>WriteH5Cache</name></member>
-      <member refid="class_emp_cyl2d_1a0d16955d370bd0d662433c46a191f5b6" prot="public" virt="non-virtual"><scope>EmpCyl2d</scope><name>writeTrans</name></member>
-      <member refid="class_emp_cyl2d_1a5c0e2f279eeaba97716625052e537a15" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>xgrid</name></member>
-      <member refid="class_emp_cyl2d_1a22ffab7ffb4aeae38564e87d82874470" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>xmax</name></member>
-      <member refid="class_emp_cyl2d_1a4425ff692c823bf4327f96f4433f0269" prot="protected" virt="non-virtual"><scope>EmpCyl2d</scope><name>xmin</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_emp_cyl2d_1_1_basis2d.xml b/doxyxml/class_emp_cyl2d_1_1_basis2d.xml
deleted file mode 100644
index e27a07b..0000000
--- a/doxyxml/class_emp_cyl2d_1_1_basis2d.xml
+++ /dev/null
@@ -1,174 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_emp_cyl2d_1_1_basis2d" kind="class" language="C++" prot="protected" abstract="yes">
-    <compoundname>EmpCyl2d::Basis2d</compoundname>
-    <includes refid="_emp_cyl2d_8_h" local="no">EmpCyl2d.H</includes>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_emp_cyl2d_1_1_basis2d_1a04a6d8d492a470b81893a6e9310b40c3" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCyl2d::Basis2d::debug</definition>
-        <argsstring></argsstring>
-        <name>debug</name>
-        <qualifiedname>EmpCyl2d::Basis2d::debug</qualifiedname>
-        <briefdescription>
-<para>Enable orthgonality check. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="385" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="385" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-func">
-      <memberdef kind="function" id="class_emp_cyl2d_1_1_basis2d_1aaa653892b1658706d8f737894581bdda" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::shared_ptr&lt; <ref refid="class_emp_cyl2d_1_1_basis2d" kindref="compound">Basis2d</ref> &gt;</type>
-        <definition>static std::shared_ptr&lt; Basis2d &gt; EmpCyl2d::Basis2d::createBasis</definition>
-        <argsstring>(int mmax, int nmaxfid, double rmax, const std::string &amp;type)</argsstring>
-        <name>createBasis</name>
-        <qualifiedname>EmpCyl2d::Basis2d::createBasis</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmaxfid</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>type</declname>
-        </param>
-        <briefdescription>
-<para><ref refid="class_basis" kindref="compound">Basis</ref> creation factory. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="389" column="5"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_emp_cyl2d_1_1_basis2d_1a9f0f5f2ec2a6a0a110c8ab220afd1625" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double EmpCyl2d::Basis2d::dens</definition>
-        <argsstring>(int M, int N, double r)=0</argsstring>
-        <name>dens</name>
-        <qualifiedname>EmpCyl2d::Basis2d::dens</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="394" column="20"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1_1_basis2d_1a376b74d34c32bffea73b4f0b8ad8126e" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double EmpCyl2d::Basis2d::dpot</definition>
-        <argsstring>(int M, int N, double r)=0</argsstring>
-        <name>dpot</name>
-        <qualifiedname>EmpCyl2d::Basis2d::dpot</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="395" column="20"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1_1_basis2d_1a3af91254a074558b722b692799b388c5" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double EmpCyl2d::Basis2d::norm</definition>
-        <argsstring>(int N, int M)=0</argsstring>
-        <name>norm</name>
-        <qualifiedname>EmpCyl2d::Basis2d::norm</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="396" column="20"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1_1_basis2d_1a1482bda5f0afb012c3a212180f90c595" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double EmpCyl2d::Basis2d::potl</definition>
-        <argsstring>(int M, int N, double r)=0</argsstring>
-        <name>potl</name>
-        <qualifiedname>EmpCyl2d::Basis2d::potl</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
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diff --git a/doxyxml/class_emp_cyl2d_1_1_expon_cyl.xml b/doxyxml/class_emp_cyl2d_1_1_expon_cyl.xml
deleted file mode 100644
index 76f8bc9..0000000
--- a/doxyxml/class_emp_cyl2d_1_1_expon_cyl.xml
+++ /dev/null
@@ -1,196 +0,0 @@
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diff --git a/doxyxml/class_emp_cyl2d_1_1_kuzmin_cyl.xml b/doxyxml/class_emp_cyl2d_1_1_kuzmin_cyl.xml
deleted file mode 100644
index dcb9c3d..0000000
--- a/doxyxml/class_emp_cyl2d_1_1_kuzmin_cyl.xml
+++ /dev/null
@@ -1,171 +0,0 @@
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-        <type>double</type>
-        <definition>double EmpCyl2d::KuzminCyl::dpot</definition>
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-        <name>dpot</name>
-        <qualifiedname>EmpCyl2d::KuzminCyl::dpot</qualifiedname>
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-        <type></type>
-        <definition>EmpCyl2d::KuzminCyl::KuzminCyl</definition>
-        <argsstring>(const YAML::Node &amp;par)</argsstring>
-        <name>KuzminCyl</name>
-        <qualifiedname>EmpCyl2d::KuzminCyl::KuzminCyl</qualifiedname>
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-          <type>const YAML::Node &amp;</type>
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-        <type>double</type>
-        <definition>double EmpCyl2d::KuzminCyl::pot</definition>
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-        <qualifiedname>EmpCyl2d::KuzminCyl::pot</qualifiedname>
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-        <references refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a882ab53e9c0ace2f830d0818e9aaf1bb" compoundref="_emp_cyl2d_8_h" startline="139">acyl</references>
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diff --git a/doxyxml/class_emp_cyl2d_1_1_mapping.xml b/doxyxml/class_emp_cyl2d_1_1_mapping.xml
deleted file mode 100644
index 1294373..0000000
--- a/doxyxml/class_emp_cyl2d_1_1_mapping.xml
+++ /dev/null
@@ -1,149 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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-  <compounddef id="class_emp_cyl2d_1_1_mapping" kind="class" language="C++" prot="public">
-    <compoundname>EmpCyl2d::Mapping</compoundname>
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-<para>Null constructor (for copy construct) </para>
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-        <type>double</type>
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-<para>From semi-infinite radius to [-1, 1]. </para>
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diff --git a/doxyxml/class_emp_cyl2d_1_1_mestel_cyl.xml b/doxyxml/class_emp_cyl2d_1_1_mestel_cyl.xml
deleted file mode 100644
index 3badb9e..0000000
--- a/doxyxml/class_emp_cyl2d_1_1_mestel_cyl.xml
+++ /dev/null
@@ -1,201 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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-    <compoundname>EmpCyl2d::MestelCyl</compoundname>
-    <basecompoundref refid="class_emp_cyl2d_1_1_model_cyl" prot="public" virt="non-virtual">EmpCyl2d::ModelCyl</basecompoundref>
-    <derivedcompoundref refid="class_emp_cyl2d_1_1_zang_cyl" prot="public" virt="non-virtual">EmpCyl2d::ZangCyl</derivedcompoundref>
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-        <definition>double EmpCyl2d::MestelCyl::vrot</definition>
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-        <name>dens</name>
-        <qualifiedname>EmpCyl2d::MestelCyl::dens</qualifiedname>
-        <reimplements refid="class_emp_cyl2d_1_1_model_cyl_1aee9c57bca32e7568d5b8cd07e6db854a">dens</reimplements>
-        <reimplementedby refid="class_emp_cyl2d_1_1_zang_cyl_1ac8aade9ab8ab18ab48487af22d47ea67">dens</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="241" column="20" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="241" bodyend="244"/>
-        <references refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" compoundref="_emp_cyl2d_8_h" startline="197">rot</references>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1ac8aade9ab8ab18ab48487af22d47ea67" compoundref="_emp_cyl2d_8_h" startline="354" endline="359">EmpCyl2d::ZangCyl::dens</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl2d_1_1_mestel_cyl_1a9a86c14800160298c7fefb80241e5128" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double EmpCyl2d::MestelCyl::dpot</definition>
-        <argsstring>(double R)</argsstring>
-        <name>dpot</name>
-        <qualifiedname>EmpCyl2d::MestelCyl::dpot</qualifiedname>
-        <reimplements refid="class_emp_cyl2d_1_1_model_cyl_1adc81ff2bbbc92a4130b22a091acf4697">dpot</reimplements>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="236" column="20" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="236" bodyend="239"/>
-        <references refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" compoundref="_emp_cyl2d_8_h" startline="197">rot</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl2d_1_1_mestel_cyl_1a7ab83a137e406503bcb59a1fe0cee7a0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>EmpCyl2d::MestelCyl::MestelCyl</definition>
-        <argsstring>(const YAML::Node &amp;par)</argsstring>
-        <name>MestelCyl</name>
-        <qualifiedname>EmpCyl2d::MestelCyl::MestelCyl</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>par</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="224" column="5" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="224" bodyend="229"/>
-        <references refid="global_8_h_1a735b1ce7a340373ac87191026132d105">parse</references>
-        <references refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" compoundref="_emp_cyl2d_8_h" startline="197">rot</references>
-        <references refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" compoundref="_emp_cyl2d_8_h" startline="197">vrot</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl2d_1_1_mestel_cyl_1a26d0c0b25f4e57347e9480e5a37003b9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double EmpCyl2d::MestelCyl::pot</definition>
-        <argsstring>(double R)</argsstring>
-        <name>pot</name>
-        <qualifiedname>EmpCyl2d::MestelCyl::pot</qualifiedname>
-        <reimplements refid="class_emp_cyl2d_1_1_model_cyl_1a0bf2b7f035ab97b7ce38fd7079eadeda">pot</reimplements>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="231" column="20" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="231" bodyend="234"/>
-        <references refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" compoundref="_emp_cyl2d_8_h" startline="197">rot</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>EmpCyl2d::MestelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_mestel_cyl"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>EmpCyl2d::ModelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_model_cyl"/>
-      </node>
-      <node id="3">
-        <label>EmpCyl2d::ZangCyl</label>
-        <link refid="class_emp_cyl2d_1_1_zang_cyl"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>EmpCyl2d::MestelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_mestel_cyl"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>EmpCyl2d::ModelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_model_cyl"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="193" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="194" bodyend="245"/>
-    <listofallmembers>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a5bd3548fb3a191a1c4a0831166416820" prot="public" virt="virtual"><scope>EmpCyl2d::MestelCyl</scope><name>dens</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a9a86c14800160298c7fefb80241e5128" prot="public" virt="virtual"><scope>EmpCyl2d::MestelCyl</scope><name>dpot</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1a8ebbf39ceec61afa0b35ca0b97bed332" prot="protected" virt="non-virtual"><scope>EmpCyl2d::MestelCyl</scope><name>id</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1a33ddabc3a850b26ef1f0180f8a4bb39c" prot="public" virt="virtual"><scope>EmpCyl2d::MestelCyl</scope><name>ID</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a7ab83a137e406503bcb59a1fe0cee7a0" prot="public" virt="non-virtual"><scope>EmpCyl2d::MestelCyl</scope><name>MestelCyl</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a3cf3ad11fe49cd8bd3d9cff714241b0b" prot="protected" virt="virtual"><scope>EmpCyl2d::MestelCyl</scope><name>parse</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a26d0c0b25f4e57347e9480e5a37003b9" prot="public" virt="virtual"><scope>EmpCyl2d::MestelCyl</scope><name>pot</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" prot="protected" virt="non-virtual"><scope>EmpCyl2d::MestelCyl</scope><name>rot</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" prot="protected" virt="non-virtual"><scope>EmpCyl2d::MestelCyl</scope><name>vrot</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_emp_cyl2d_1_1_model_cyl.xml b/doxyxml/class_emp_cyl2d_1_1_model_cyl.xml
deleted file mode 100644
index a5d7aea..0000000
--- a/doxyxml/class_emp_cyl2d_1_1_model_cyl.xml
+++ /dev/null
@@ -1,175 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_emp_cyl2d_1_1_model_cyl" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>EmpCyl2d::ModelCyl</compoundname>
-    <derivedcompoundref refid="class_emp_cyl2d_1_1_expon_cyl" prot="public" virt="non-virtual">EmpCyl2d::ExponCyl</derivedcompoundref>
-    <derivedcompoundref refid="class_emp_cyl2d_1_1_kuzmin_cyl" prot="public" virt="non-virtual">EmpCyl2d::KuzminCyl</derivedcompoundref>
-    <derivedcompoundref refid="class_emp_cyl2d_1_1_mestel_cyl" prot="public" virt="non-virtual">EmpCyl2d::MestelCyl</derivedcompoundref>
-    <includes refid="_emp_cyl2d_8_h" local="no">EmpCyl2d.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_emp_cyl2d_1_1_model_cyl_1a8ebbf39ceec61afa0b35ca0b97bed332" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string EmpCyl2d::ModelCyl::id</definition>
-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>EmpCyl2d::ModelCyl::id</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="38" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="38" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1_1_model_cyl_1a33ddabc3a850b26ef1f0180f8a4bb39c" compoundref="_emp_cyl2d_8_h" startline="47" endline="47">ID</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-func">
-      <memberdef kind="function" id="class_emp_cyl2d_1_1_model_cyl_1a590bae8af6992903978f94d799bdd012" prot="protected" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void EmpCyl2d::ModelCyl::parse</definition>
-        <argsstring>(const YAML::Node &amp;)=0</argsstring>
-        <name>parse</name>
-        <qualifiedname>EmpCyl2d::ModelCyl::parse</qualifiedname>
-        <reimplementedby refid="class_emp_cyl2d_1_1_expon_cyl_1ab7e68f45c42103e046e0b22fc6ab4898">parse</reimplementedby>
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-        <reimplementedby refid="class_emp_cyl2d_1_1_mestel_cyl_1a3cf3ad11fe49cd8bd3d9cff714241b0b">parse</reimplementedby>
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-        <param>
-          <type>const YAML::Node &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="39" column="18"/>
-      </memberdef>
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-        <type>double</type>
-        <definition>virtual double EmpCyl2d::ModelCyl::dens</definition>
-        <argsstring>(double r)=0</argsstring>
-        <name>dens</name>
-        <qualifiedname>EmpCyl2d::ModelCyl::dens</qualifiedname>
-        <reimplementedby refid="class_emp_cyl2d_1_1_expon_cyl_1a23975a947174e6d6f15324ddd8049e72">dens</reimplementedby>
-        <reimplementedby refid="class_emp_cyl2d_1_1_kuzmin_cyl_1ab78966b1e02a599fd5cb703da8a78bb1">dens</reimplementedby>
-        <reimplementedby refid="class_emp_cyl2d_1_1_mestel_cyl_1a5bd3548fb3a191a1c4a0831166416820">dens</reimplementedby>
-        <reimplementedby refid="class_emp_cyl2d_1_1_zang_cyl_1ac8aade9ab8ab18ab48487af22d47ea67">dens</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="45" column="20"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1_1_model_cyl_1adc81ff2bbbc92a4130b22a091acf4697" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double EmpCyl2d::ModelCyl::dpot</definition>
-        <argsstring>(double r)=0</argsstring>
-        <name>dpot</name>
-        <qualifiedname>EmpCyl2d::ModelCyl::dpot</qualifiedname>
-        <reimplementedby refid="class_emp_cyl2d_1_1_expon_cyl_1a9201ef90daeca2fb0dcdec94bdc8a694">dpot</reimplementedby>
-        <reimplementedby refid="class_emp_cyl2d_1_1_kuzmin_cyl_1a44b53dd9c6922cb0fb6a0a28a0690b34">dpot</reimplementedby>
-        <reimplementedby refid="class_emp_cyl2d_1_1_mestel_cyl_1a9a86c14800160298c7fefb80241e5128">dpot</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="44" column="20"/>
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-      <memberdef kind="function" id="class_emp_cyl2d_1_1_model_cyl_1a33ddabc3a850b26ef1f0180f8a4bb39c" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>std::string</type>
-        <definition>virtual std::string EmpCyl2d::ModelCyl::ID</definition>
-        <argsstring>()</argsstring>
-        <name>ID</name>
-        <qualifiedname>EmpCyl2d::ModelCyl::ID</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="47" column="25" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="47" bodyend="47"/>
-        <references refid="class_emp_cyl2d_1_1_model_cyl_1a8ebbf39ceec61afa0b35ca0b97bed332" compoundref="_emp_cyl2d_8_h" startline="38">id</references>
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-      <memberdef kind="function" id="class_emp_cyl2d_1_1_model_cyl_1a0bf2b7f035ab97b7ce38fd7079eadeda" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double EmpCyl2d::ModelCyl::pot</definition>
-        <argsstring>(double r)=0</argsstring>
-        <name>pot</name>
-        <qualifiedname>EmpCyl2d::ModelCyl::pot</qualifiedname>
-        <reimplementedby refid="class_emp_cyl2d_1_1_expon_cyl_1a1f4f1365fea9b1bdd97ad232c878e392">pot</reimplementedby>
-        <reimplementedby refid="class_emp_cyl2d_1_1_kuzmin_cyl_1ab1c2dabbf6b68ed0c19c26d4096a6491">pot</reimplementedby>
-        <reimplementedby refid="class_emp_cyl2d_1_1_mestel_cyl_1a26d0c0b25f4e57347e9480e5a37003b9">pot</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="43" column="20"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>A two-dimensional disk model for computing the EOF. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>EmpCyl2d::ExponCyl</label>
-        <link refid="class_emp_cyl2d_1_1_expon_cyl"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>EmpCyl2d::KuzminCyl</label>
-        <link refid="class_emp_cyl2d_1_1_kuzmin_cyl"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>EmpCyl2d::MestelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_mestel_cyl"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>EmpCyl2d::ModelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_model_cyl"/>
-      </node>
-      <node id="5">
-        <label>EmpCyl2d::ZangCyl</label>
-        <link refid="class_emp_cyl2d_1_1_zang_cyl"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="34" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="35" bodyend="48"/>
-    <listofallmembers>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1aee9c57bca32e7568d5b8cd07e6db854a" prot="public" virt="pure-virtual"><scope>EmpCyl2d::ModelCyl</scope><name>dens</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1adc81ff2bbbc92a4130b22a091acf4697" prot="public" virt="pure-virtual"><scope>EmpCyl2d::ModelCyl</scope><name>dpot</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1a8ebbf39ceec61afa0b35ca0b97bed332" prot="protected" virt="non-virtual"><scope>EmpCyl2d::ModelCyl</scope><name>id</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1a33ddabc3a850b26ef1f0180f8a4bb39c" prot="public" virt="virtual"><scope>EmpCyl2d::ModelCyl</scope><name>ID</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1a590bae8af6992903978f94d799bdd012" prot="protected" virt="pure-virtual"><scope>EmpCyl2d::ModelCyl</scope><name>parse</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1a0bf2b7f035ab97b7ce38fd7079eadeda" prot="public" virt="pure-virtual"><scope>EmpCyl2d::ModelCyl</scope><name>pot</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_emp_cyl2d_1_1_zang_cyl.xml b/doxyxml/class_emp_cyl2d_1_1_zang_cyl.xml
deleted file mode 100644
index 5f9b914..0000000
--- a/doxyxml/class_emp_cyl2d_1_1_zang_cyl.xml
+++ /dev/null
@@ -1,380 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_emp_cyl2d_1_1_zang_cyl" kind="class" language="C++" prot="public">
-    <compoundname>EmpCyl2d::ZangCyl</compoundname>
-    <basecompoundref refid="class_emp_cyl2d_1_1_mestel_cyl" prot="public" virt="non-virtual">EmpCyl2d::MestelCyl</basecompoundref>
-    <includes refid="_emp_cyl2d_8_h" local="no">EmpCyl2d.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_emp_cyl2d_1_1_zang_cyl_1ac5740ba03f4d293f6dd2fba0851ad484" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::asoft</definition>
-        <argsstring></argsstring>
-        <name>asoft</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::asoft</qualifiedname>
-        <initializer>= 1.0e-8</initializer>
-        <briefdescription>
-<para>Softening factor (not currently used) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      </memberdef>
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-        <type>bool</type>
-        <definition>bool EmpCyl2d::ZangCyl::Inner</definition>
-        <argsstring></argsstring>
-        <name>Inner</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::Inner</qualifiedname>
-        <initializer>= true</initializer>
-        <briefdescription>
-<para>Ignore inner cut-off for N&lt;0.05. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="259" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="259" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1ac8aade9ab8ab18ab48487af22d47ea67" compoundref="_emp_cyl2d_8_h" startline="354" endline="359">dens</referencedby>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" compoundref="_emp_cyl2d_8_h" startline="335" endline="351">ZangCyl</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::mu</definition>
-        <argsstring></argsstring>
-        <name>mu</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::mu</qualifiedname>
-        <briefdescription>
-<para>Parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="253" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="253" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a58311bc5eb1402a9506d36d80ce9155c" compoundref="_emp_cyl2d_8_h" startline="286" endline="291">dTouter</referencedby>
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-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::nu</definition>
-        <argsstring></argsstring>
-        <name>nu</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::nu</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="253" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="253" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a49f87e15df18e406da330041c99c3e96" compoundref="_emp_cyl2d_8_h" startline="278" endline="283">dTinner</referencedby>
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-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a9ec6fce0cf7ca99e6eb1d42c4b7f7609" compoundref="_emp_cyl2d_8_h" startline="265" endline="269">Tinner</referencedby>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" compoundref="_emp_cyl2d_8_h" startline="335" endline="351">ZangCyl</referencedby>
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-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::ri</definition>
-        <argsstring></argsstring>
-        <name>ri</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::ri</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="253" column="18" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="253" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a4a7f9b1cf01e346033aa9f6da3cbbe15" compoundref="_emp_cyl2d_8_h" startline="296" endline="330">parse</referencedby>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" compoundref="_emp_cyl2d_8_h" startline="335" endline="351">ZangCyl</referencedby>
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-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::ro</definition>
-        <argsstring></argsstring>
-        <name>ro</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::ro</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="253" column="21" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="253" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a4a7f9b1cf01e346033aa9f6da3cbbe15" compoundref="_emp_cyl2d_8_h" startline="296" endline="330">parse</referencedby>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" compoundref="_emp_cyl2d_8_h" startline="335" endline="351">ZangCyl</referencedby>
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-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::Tifac</definition>
-        <argsstring></argsstring>
-        <name>Tifac</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::Tifac</qualifiedname>
-        <briefdescription>
-<para>Taper factors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="262" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="262" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a49f87e15df18e406da330041c99c3e96" compoundref="_emp_cyl2d_8_h" startline="278" endline="283">dTinner</referencedby>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a9ec6fce0cf7ca99e6eb1d42c4b7f7609" compoundref="_emp_cyl2d_8_h" startline="265" endline="269">Tinner</referencedby>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" compoundref="_emp_cyl2d_8_h" startline="335" endline="351">ZangCyl</referencedby>
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-      <memberdef kind="variable" id="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::Tofac</definition>
-        <argsstring></argsstring>
-        <name>Tofac</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::Tofac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="262" column="18" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="262" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a58311bc5eb1402a9506d36d80ce9155c" compoundref="_emp_cyl2d_8_h" startline="286" endline="291">dTouter</referencedby>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a5e109a82cee9c50e79b4cd91e751cec4" compoundref="_emp_cyl2d_8_h" startline="272" endline="275">Touter</referencedby>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" compoundref="_emp_cyl2d_8_h" startline="335" endline="351">ZangCyl</referencedby>
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-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::dTinner</definition>
-        <argsstring>(double Jp)</argsstring>
-        <name>dTinner</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::dTinner</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>Jp</declname>
-        </param>
-        <briefdescription>
-<para>Deriv of inner taper function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="278" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="278" bodyend="283"/>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" compoundref="_emp_cyl2d_8_h" startline="253">nu</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" compoundref="_emp_cyl2d_8_h" startline="262">Tifac</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl2d_1_1_zang_cyl_1a58311bc5eb1402a9506d36d80ce9155c" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::dTouter</definition>
-        <argsstring>(double Jp)</argsstring>
-        <name>dTouter</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::dTouter</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>Jp</declname>
-        </param>
-        <briefdescription>
-<para>Deriv of outer taper function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="286" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="286" bodyend="291"/>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" compoundref="_emp_cyl2d_8_h" startline="253">mu</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" compoundref="_emp_cyl2d_8_h" startline="262">Tofac</references>
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-      <memberdef kind="function" id="class_emp_cyl2d_1_1_zang_cyl_1a9ec6fce0cf7ca99e6eb1d42c4b7f7609" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::Tinner</definition>
-        <argsstring>(double Jp)</argsstring>
-        <name>Tinner</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::Tinner</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>Jp</declname>
-        </param>
-        <briefdescription>
-<para>Inner taper function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="265" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="265" bodyend="269"/>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" compoundref="_emp_cyl2d_8_h" startline="253">nu</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" compoundref="_emp_cyl2d_8_h" startline="262">Tifac</references>
-        <referencedby refid="class_emp_cyl2d_1_1_zang_cyl_1ac8aade9ab8ab18ab48487af22d47ea67" compoundref="_emp_cyl2d_8_h" startline="354" endline="359">dens</referencedby>
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-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::Touter</definition>
-        <argsstring>(double Jp)</argsstring>
-        <name>Touter</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::Touter</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>Jp</declname>
-        </param>
-        <briefdescription>
-<para>Outer taper function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="272" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="272" bodyend="275"/>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" compoundref="_emp_cyl2d_8_h" startline="253">mu</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" compoundref="_emp_cyl2d_8_h" startline="262">Tofac</references>
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-        <type>void</type>
-        <definition>void EmpCyl2d::ZangCyl::parse</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>parse</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::parse</qualifiedname>
-        <reimplements refid="class_emp_cyl2d_1_1_mestel_cyl_1a3cf3ad11fe49cd8bd3d9cff714241b0b">parse</reimplements>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Assign values from YAML. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="296" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="296" bodyend="330"/>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" compoundref="_emp_cyl2d_8_h" startline="253">mu</references>
-        <references refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" compoundref="localmpi_8_h" startline="17">myid</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" compoundref="_emp_cyl2d_8_h" startline="253">nu</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1aae4845cfcf7366f1601cfb90c9e59fc6" compoundref="_emp_cyl2d_8_h" startline="253">ri</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1af5cd8eb236aea13e4ed3810f200a8045" compoundref="_emp_cyl2d_8_h" startline="253">ro</references>
-      </memberdef>
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-        <type>double</type>
-        <definition>double EmpCyl2d::ZangCyl::dens</definition>
-        <argsstring>(double R)</argsstring>
-        <name>dens</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::dens</qualifiedname>
-        <reimplements refid="class_emp_cyl2d_1_1_mestel_cyl_1a5bd3548fb3a191a1c4a0831166416820">dens</reimplements>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
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-        <briefdescription>
-<para>Surface density. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="354" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="354" bodyend="359"/>
-        <references refid="class_emp_cyl2d_1_1_mestel_cyl_1a5bd3548fb3a191a1c4a0831166416820" compoundref="_emp_cyl2d_8_h" startline="241" endline="244">EmpCyl2d::MestelCyl::dens</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1aea1830c1aed130c7f05699519ce52e25" compoundref="_emp_cyl2d_8_h" startline="259">Inner</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1a9ec6fce0cf7ca99e6eb1d42c4b7f7609" compoundref="_emp_cyl2d_8_h" startline="265" endline="269">Tinner</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1a5e109a82cee9c50e79b4cd91e751cec4" compoundref="_emp_cyl2d_8_h" startline="272" endline="275">Touter</references>
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-        <type></type>
-        <definition>EmpCyl2d::ZangCyl::ZangCyl</definition>
-        <argsstring>(const YAML::Node &amp;par)</argsstring>
-        <name>ZangCyl</name>
-        <qualifiedname>EmpCyl2d::ZangCyl::ZangCyl</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>par</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="335" column="5" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="335" bodyend="351"/>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1aea1830c1aed130c7f05699519ce52e25" compoundref="_emp_cyl2d_8_h" startline="259">Inner</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" compoundref="_emp_cyl2d_8_h" startline="253">nu</references>
-        <references refid="global_8_h_1a735b1ce7a340373ac87191026132d105">parse</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1aae4845cfcf7366f1601cfb90c9e59fc6" compoundref="_emp_cyl2d_8_h" startline="253">ri</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1af5cd8eb236aea13e4ed3810f200a8045" compoundref="_emp_cyl2d_8_h" startline="253">ro</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" compoundref="_emp_cyl2d_8_h" startline="262">Tifac</references>
-        <references refid="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" compoundref="_emp_cyl2d_8_h" startline="262">Tofac</references>
-        <references refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" compoundref="_emp_cyl2d_8_h" startline="197">EmpCyl2d::MestelCyl::vrot</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>EmpCyl2d::MestelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_mestel_cyl"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>EmpCyl2d::ModelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_model_cyl"/>
-      </node>
-      <node id="1">
-        <label>EmpCyl2d::ZangCyl</label>
-        <link refid="class_emp_cyl2d_1_1_zang_cyl"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>EmpCyl2d::MestelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_mestel_cyl"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>EmpCyl2d::ModelCyl</label>
-        <link refid="class_emp_cyl2d_1_1_model_cyl"/>
-      </node>
-      <node id="1">
-        <label>EmpCyl2d::ZangCyl</label>
-        <link refid="class_emp_cyl2d_1_1_zang_cyl"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" line="248" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCyl2d.H" bodystart="249" bodyend="361"/>
-    <listofallmembers>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1ac5740ba03f4d293f6dd2fba0851ad484" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>asoft</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1ac8aade9ab8ab18ab48487af22d47ea67" prot="public" virt="virtual"><scope>EmpCyl2d::ZangCyl</scope><name>dens</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a9a86c14800160298c7fefb80241e5128" prot="public" virt="virtual"><scope>EmpCyl2d::ZangCyl</scope><name>dpot</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1a49f87e15df18e406da330041c99c3e96" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>dTinner</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1a58311bc5eb1402a9506d36d80ce9155c" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>dTouter</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1a33ddabc3a850b26ef1f0180f8a4bb39c" prot="public" virt="virtual"><scope>EmpCyl2d::ZangCyl</scope><name>ID</name></member>
-      <member refid="class_emp_cyl2d_1_1_model_cyl_1a8ebbf39ceec61afa0b35ca0b97bed332" prot="protected" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>id</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1aea1830c1aed130c7f05699519ce52e25" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>Inner</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a7ab83a137e406503bcb59a1fe0cee7a0" prot="public" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>MestelCyl</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1a8976cc73d5d3a0e212a35828157aad44" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>mu</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1af70fa62fe3fa9fffd2dcd9195650d5bf" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>nu</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1a4a7f9b1cf01e346033aa9f6da3cbbe15" prot="protected" virt="virtual"><scope>EmpCyl2d::ZangCyl</scope><name>parse</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a26d0c0b25f4e57347e9480e5a37003b9" prot="public" virt="virtual"><scope>EmpCyl2d::ZangCyl</scope><name>pot</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1aae4845cfcf7366f1601cfb90c9e59fc6" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>ri</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1af5cd8eb236aea13e4ed3810f200a8045" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>ro</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1a2c5e53c75a2984746f0f85efee1637ec" prot="protected" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>rot</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1ad7716bf0d4e00af79e41639a5e3bd1f4" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>Tifac</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1a9ec6fce0cf7ca99e6eb1d42c4b7f7609" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>Tinner</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1a3478441280a03c6c33f69ff59d0ff0f6" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>Tofac</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1a5e109a82cee9c50e79b4cd91e751cec4" prot="private" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>Touter</name></member>
-      <member refid="class_emp_cyl2d_1_1_mestel_cyl_1aaf0149751912988746e917a2718469ae" prot="protected" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>vrot</name></member>
-      <member refid="class_emp_cyl2d_1_1_zang_cyl_1a776d07246c36af2b90a2b25b637492b3" prot="public" virt="non-virtual"><scope>EmpCyl2d::ZangCyl</scope><name>ZangCyl</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_emp_cyl_s_l.xml b/doxyxml/class_emp_cyl_s_l.xml
deleted file mode 100644
index 87dd0de..0000000
--- a/doxyxml/class_emp_cyl_s_l.xml
+++ /dev/null
@@ -1,5594 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_emp_cyl_s_l" kind="class" language="C++" prot="public">
-    <compoundname>EmpCylSL</compoundname>
-    <derivedcompoundref refid="class_cyl_e_x_p" prot="public" virt="non-virtual">CylEXP</derivedcompoundref>
-    <includes refid="_emp_cyl_s_l_8_h" local="no">EmpCylSL.H</includes>
-    <innerclass refid="class_emp_cyl_s_l_1_1_axi_disk" prot="public">EmpCylSL::AxiDisk</innerclass>
-    <innerclass refid="struct_emp_cyl_s_l_1_1_coef_matrix" prot="protected">EmpCylSL::CoefMatrix</innerclass>
-    <innerclass refid="struct_emp_cyl_s_l_1_1_coef_vector" prot="protected">EmpCylSL::CoefVector</innerclass>
-    <innerclass refid="struct_emp_cyl_s_l_1_1_mstep_array" prot="protected">EmpCylSL::MstepArray</innerclass>
-    <innerclass refid="class_emp_cyl_s_l_1_1_p_c_abasis" prot="protected">EmpCylSL::PCAbasis</innerclass>
-    <innerclass refid="class_emp_cyl_s_l_1_1_p_c_aelement" prot="protected">EmpCylSL::PCAelement</innerclass>
-    <sectiondef kind="user-defined">
-      <header>Utility functions</header>
-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" prot="public" static="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>using EmpCylSL::TableArray =  std::vector&lt;Eigen::MatrixXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>TableArray</name>
-        <qualifiedname>EmpCylSL::TableArray</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="818" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="818" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" prot="private" static="no" mutable="no">
-        <type><ref refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793" kindref="member">TKType</ref></type>
-        <definition>TKType EmpCylSL::tk_type</definition>
-        <argsstring></argsstring>
-        <name>tk_type</name>
-        <qualifiedname>EmpCylSL::tk_type</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="1023" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="1023" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1a7f48386e3f921bde7ec151270ec78650" compoundref="_emp_cyl_s_l_8_h" startline="772" endline="804">setHall</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1a2452105272021c3c33064981587c1184" compoundref="_emp_cyl_s_l_8_h" startline="902" endline="913">setTK</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ad58896052cd458e7f8c6a69a84a0b061" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::legendre_R</definition>
-        <argsstring>(int lmax, double x, Eigen::MatrixXd &amp;p)</argsstring>
-        <name>legendre_R</name>
-        <qualifiedname>EmpCylSL::legendre_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Compute Associated <ref refid="class_legendre" kindref="compound">Legendre</ref> Polynomials, return Matrix type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="740" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a02a79620604c800c332acda6b041447f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dlegendre_R</definition>
-        <argsstring>(int lmax, double x, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dp)</argsstring>
-        <name>dlegendre_R</name>
-        <qualifiedname>EmpCylSL::dlegendre_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Compute Associated <ref refid="class_legendre" kindref="compound">Legendre</ref> Polynomials and derivitives, return Matrix type </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="743" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ad4393e20f35ceecb752b3fa6a014bcb0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::sinecosine_R</definition>
-        <argsstring>(int mmax, double phi, Eigen::VectorXd &amp;c, Eigen::VectorXd &amp;s)</argsstring>
-        <name>sinecosine_R</name>
-        <qualifiedname>EmpCylSL::sinecosine_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>s</declname>
-        </param>
-        <briefdescription>
-<para>Compute vectors of sines and cosines by recursion. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="745" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a40fe0cc482bea73f3393f5162d391e2c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::xi_to_r</definition>
-        <argsstring>(double)</argsstring>
-        <name>xi_to_r</name>
-        <qualifiedname>EmpCylSL::xi_to_r</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-<para>Convert from non-dimensional to dimensional radial coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="750" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a900f4ad76eb155da9a21e483393c30db" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::r_to_xi</definition>
-        <argsstring>(double)</argsstring>
-        <name>r_to_xi</name>
-        <qualifiedname>EmpCylSL::r_to_xi</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-<para>Convert from dimension to non-dimension radial coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="753" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a0e10a3d34155f376150a0ece8a85acbb" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::d_xi_to_r</definition>
-        <argsstring>(double)</argsstring>
-        <name>d_xi_to_r</name>
-        <qualifiedname>EmpCylSL::d_xi_to_r</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-<para>Jacobian. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="756" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a17510668f28e08910262d470b7e1c36b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::get_ascale</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_ascale</name>
-        <qualifiedname>EmpCylSL::get_ascale</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return current value of disk scale length. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="759" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="759" bodyend="759"/>
-        <references refid="class_emp_cyl_s_l_1a63fbc7a58c18306cf8ff7b9cd1f1acd7" compoundref="_emp_cyl_s_l_8_h" startline="75">ASCALE</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ad9ab639d87404f5410b8136fa75a2873" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::get_hscale</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_hscale</name>
-        <qualifiedname>EmpCylSL::get_hscale</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return current value of disk scale height. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="762" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="762" bodyend="762"/>
-        <references refid="class_emp_cyl_s_l_1aafceeb0f77f53e1eb2fafc9ac8d1ddc9" compoundref="_emp_cyl_s_l_8_h" startline="76">HSCALE</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ad1a0ddf3cf580d8c4d688d1232e5d3ad" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::get_rtable</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_rtable</name>
-        <qualifiedname>EmpCylSL::get_rtable</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return current table radius. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="765" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="765" bodyend="765"/>
-        <references refid="class_emp_cyl_s_l_1a6627c10537857cd1da90c8935bba8beb" compoundref="_emp_cyl_s_l_8_h" startline="110">Rtable</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a9488ca326d3fa636bd807f5caf55d2b5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::setEven</definition>
-        <argsstring>(bool even=true)</argsstring>
-        <name>setEven</name>
-        <qualifiedname>EmpCylSL::setEven</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>even</declname>
-          <defval>true</defval>
-        </param>
-        <briefdescription>
-<para>Set even modes only. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="768" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="768" bodyend="768"/>
-        <references refid="class_emp_cyl_s_l_1a0becb34528efb75dd76d60b4a02084d8" compoundref="_emp_cyl_s_l_8_h" startline="332">EVEN_M</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a7f48386e3f921bde7ec151270ec78650" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::setHall</definition>
-        <argsstring>(std::string file, unsigned tot)</argsstring>
-        <name>setHall</name>
-        <qualifiedname>EmpCylSL::setHall</qualifiedname>
-        <param>
-          <type>std::string</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>tot</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Set file name for EOF analysis and sample size for subsample computation </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="772" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="772" bodyend="804"/>
-        <references refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" compoundref="model3d_8_h" startline="4">file</references>
-        <references refid="class_emp_cyl_s_l_1a32cdbad0071825e02d2f697ca4aedf4b" compoundref="_emp_cyl_s_l_8_h" startline="63">hallfile</references>
-        <references refid="class_emp_cyl_s_l_1a1090e03956ae9472f3e706155b236a91">init_pca</references>
-        <references refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" compoundref="localmpi_8_h" startline="17">myid</references>
-        <references refid="class_emp_cyl_s_l_1a1966b7be886e21c19de9945e84cf1996" compoundref="_emp_cyl_s_l_8_h" startline="62">nbodstot</references>
-        <references refid="class_emp_cyl_s_l_1ad1c941f70ba409b1267a5c602192a06f" compoundref="_emp_cyl_s_l_8_h" startline="397">PCAEOF</references>
-        <references refid="class_emp_cyl_s_l_1a7421fd16b5bc2b716abdadeb2ee4fbda" compoundref="_emp_cyl_s_l_8_h" startline="391">PCAVAR</references>
-        <references refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" compoundref="_emp_cyl_s_l_8_h" startline="1023">tk_type</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a0671042c6008017bd136991f272894b8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::getPotSC</definition>
-        <argsstring>(int m, int j, double R, double z, double &amp;pC, double &amp;pS)</argsstring>
-        <name>getPotSC</name>
-        <qualifiedname>EmpCylSL::getPotSC</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>j</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>pC</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>pS</declname>
-        </param>
-        <briefdescription>
-<para>Get potential grid interpolated entries. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="813" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1aae847e6f397b305dcd301ad7966a7923" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::getDensSC</definition>
-        <argsstring>(int m, int j, double R, double z, double &amp;dC, double &amp;dS)</argsstring>
-        <name>getDensSC</name>
-        <qualifiedname>EmpCylSL::getDensSC</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>j</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dC</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dS</declname>
-        </param>
-        <briefdescription>
-<para>Get density grid interpolated entries. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="816" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1adc57fe7deeda26444f065e444814b105" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref></type>
-        <definition>TableArray EmpCylSL::getDensC</definition>
-        <argsstring>()</argsstring>
-        <name>getDensC</name>
-        <qualifiedname>EmpCylSL::getDensC</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Return density and potential matrices Indexed (M, n) pair as id = M*NORDER + n </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="822" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="822" bodyend="835"/>
-        <references refid="class_emp_cyl_s_l_1a7e56db72abcf0d0eec07f15eb2376032" compoundref="_emp_cyl_s_l_8_h" startline="113">densC</references>
-        <references refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" compoundref="_emp_cyl_s_l_8_h" startline="67">M</references>
-        <references refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" compoundref="_emp_cyl_s_l_8_h" startline="56">MMAX</references>
-        <references refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" compoundref="_emp_cyl_s_l_8_h" startline="59">NORDER</references>
-        <references refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" compoundref="_emp_cyl_s_l_8_h" startline="423">NUMX</references>
-        <references refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" compoundref="_emp_cyl_s_l_8_h" startline="426">NUMY</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a99e22052f40b08a7a87f8ff89541cf45" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref></type>
-        <definition>TableArray EmpCylSL::getDensS</definition>
-        <argsstring>()</argsstring>
-        <name>getDensS</name>
-        <qualifiedname>EmpCylSL::getDensS</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="837" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="837" bodyend="850"/>
-        <references refid="class_emp_cyl_s_l_1ae05a132072a42c08fdfbac5cdd4117b0" compoundref="_emp_cyl_s_l_8_h" startline="118">densS</references>
-        <references refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" compoundref="_emp_cyl_s_l_8_h" startline="67">M</references>
-        <references refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" compoundref="_emp_cyl_s_l_8_h" startline="56">MMAX</references>
-        <references refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" compoundref="_emp_cyl_s_l_8_h" startline="59">NORDER</references>
-        <references refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" compoundref="_emp_cyl_s_l_8_h" startline="423">NUMX</references>
-        <references refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" compoundref="_emp_cyl_s_l_8_h" startline="426">NUMY</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a733b36fdc7a0bb9b6b57f067eb75d925" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref></type>
-        <definition>TableArray EmpCylSL::getPotlC</definition>
-        <argsstring>()</argsstring>
-        <name>getPotlC</name>
-        <qualifiedname>EmpCylSL::getPotlC</qualifiedname>
-        <briefdescription>
-<para>Return density and potential matrices. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="853" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="853" bodyend="866"/>
-        <references refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" compoundref="_emp_cyl_s_l_8_h" startline="67">M</references>
-        <references refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" compoundref="_emp_cyl_s_l_8_h" startline="56">MMAX</references>
-        <references refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" compoundref="_emp_cyl_s_l_8_h" startline="59">NORDER</references>
-        <references refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" compoundref="_emp_cyl_s_l_8_h" startline="423">NUMX</references>
-        <references refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" compoundref="_emp_cyl_s_l_8_h" startline="426">NUMY</references>
-        <references refid="class_emp_cyl_s_l_1abf856ef4ab862213fcc5b4accb5f135a" compoundref="_emp_cyl_s_l_8_h" startline="112">potC</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1abca06e6140ca55efa1162089b8346b68" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="class_emp_cyl_s_l_1afe32ddfdaa2dfb84185985cccd96b198" kindref="member">TableArray</ref></type>
-        <definition>TableArray EmpCylSL::getPotlS</definition>
-        <argsstring>()</argsstring>
-        <name>getPotlS</name>
-        <qualifiedname>EmpCylSL::getPotlS</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="868" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="868" bodyend="881"/>
-        <references refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" compoundref="_emp_cyl_s_l_8_h" startline="67">M</references>
-        <references refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" compoundref="_emp_cyl_s_l_8_h" startline="56">MMAX</references>
-        <references refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" compoundref="_emp_cyl_s_l_8_h" startline="59">NORDER</references>
-        <references refid="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" compoundref="_emp_cyl_s_l_8_h" startline="423">NUMX</references>
-        <references refid="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" compoundref="_emp_cyl_s_l_8_h" startline="426">NUMY</references>
-        <references refid="class_emp_cyl_s_l_1a80294caadb34d5e85752bed0f85b2b42" compoundref="_emp_cyl_s_l_8_h" startline="117">potS</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a3506d9e2af85bad3fbaa6d4322445139" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::getPotParticle</definition>
-        <argsstring>(double x, double y, double z, ContribArray &amp;vc, ContribArray &amp;vs)</argsstring>
-        <name>getPotParticle</name>
-        <qualifiedname>EmpCylSL::getPotParticle</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type><ref refid="class_emp_cyl_s_l_1a72d8726715739ecffdfe29e5c8569cbc" kindref="member">ContribArray</ref> &amp;</type>
-          <declname>vc</declname>
-        </param>
-        <param>
-          <type><ref refid="class_emp_cyl_s_l_1a72d8726715739ecffdfe29e5c8569cbc" kindref="member">ContribArray</ref> &amp;</type>
-          <declname>vs</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="884" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a1f6cc889a40ff0168ee43b4d139b7e8f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::get_trimmed</definition>
-        <argsstring>(double snr, std::vector&lt; Eigen::VectorXd &gt; &amp;ac_cos, std::vector&lt; Eigen::VectorXd &gt; &amp;ac_sin, std::vector&lt; Eigen::VectorXd &gt; *rt_cos=0, std::vector&lt; Eigen::VectorXd &gt; *rt_sin=0, std::vector&lt; Eigen::VectorXd &gt; *sn_rat=0)</argsstring>
-        <name>get_trimmed</name>
-        <qualifiedname>EmpCylSL::get_trimmed</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>snr</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; Eigen::VectorXd &gt; &amp;</type>
-          <declname>ac_cos</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; Eigen::VectorXd &gt; &amp;</type>
-          <declname>ac_sin</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; Eigen::VectorXd &gt; *</type>
-          <declname>rt_cos</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>std::vector&lt; Eigen::VectorXd &gt; *</type>
-          <declname>rt_sin</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>std::vector&lt; Eigen::VectorXd &gt; *</type>
-          <declname>sn_rat</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-<para>Get the coefficients trimmed by a SNR value using the defined algorithm. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="888" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a27cd8d9869bfdbb710e28925664f2289" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::set_trimmed</definition>
-        <argsstring>(double snr, double rem)</argsstring>
-        <name>set_trimmed</name>
-        <qualifiedname>EmpCylSL::set_trimmed</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>snr</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rem</declname>
-        </param>
-        <briefdescription>
-<para>Set the coefficients trimmed by a SNR value using the defined algorithm. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="895" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a9a192aad1ace6a1bc46cb96e7ae13ec2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::setTotal</definition>
-        <argsstring>(unsigned tot)</argsstring>
-        <name>setTotal</name>
-        <qualifiedname>EmpCylSL::setTotal</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>tot</declname>
-        </param>
-        <briefdescription>
-<para>Set number of bodies for subsample computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="898" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="898" bodyend="900"/>
-        <references refid="class_emp_cyl_s_l_1a1966b7be886e21c19de9945e84cf1996" compoundref="_emp_cyl_s_l_8_h" startline="62">nbodstot</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a2452105272021c3c33064981587c1184" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::setTK</definition>
-        <argsstring>(const std::string &amp;tk)</argsstring>
-        <name>setTK</name>
-        <qualifiedname>EmpCylSL::setTK</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>tk</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="902" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="902" bodyend="913"/>
-        <references refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793afab918d81116908252f64b5c7e2eaa99" compoundref="_emp_cyl_s_l_8_h" startline="348">Hall</references>
-        <references refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" compoundref="localmpi_8_h" startline="17">myid</references>
-        <references refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793a955b9c65bb82613a6ed0a36482bfbded" compoundref="_emp_cyl_s_l_8_h" startline="350">None</references>
-        <references refid="class_emp_cyl_s_l_1a18bed20a9f4ae417170c7e3f76d88f48" compoundref="_emp_cyl_s_l_8_h" startline="1023">tk_type</references>
-        <references refid="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793aaef8f7277ef603757d44900f96e17d67" compoundref="_emp_cyl_s_l_8_h" startline="349">Truncate</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ae0476e0a062bbdafcb8a953545e12ac1" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt; double &gt; EmpCylSL::sanity</definition>
-        <argsstring>()</argsstring>
-        <name>sanity</name>
-        <qualifiedname>EmpCylSL::sanity</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="915" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="915" bodyend="919"/>
-        <references refid="class_emp_cyl_s_l_1aa73f0cb40abc6958380212b49e620302" compoundref="_emp_cyl_s_l_8_h" startline="157">accum_cos</references>
-        <references refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" compoundref="_emp_cyl_s_l_8_h" startline="73">m</references>
-        <references refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" compoundref="_emp_cyl_s_l_8_h" startline="56">MMAX</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a588dfcebda9ba2b17021345f5966be63" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::ortho_check</definition>
-        <argsstring>(std::ostream &amp;out)</argsstring>
-        <name>ortho_check</name>
-        <qualifiedname>EmpCylSL::ortho_check</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-<para>Check orthogonality for basis (debugging) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="922" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1af728339f3ca3414a24893217f2f350af" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt; Eigen::MatrixXd &gt; EmpCylSL::orthoCheck</definition>
-        <argsstring>()</argsstring>
-        <name>orthoCheck</name>
-        <qualifiedname>EmpCylSL::orthoCheck</qualifiedname>
-        <briefdescription>
-<para>Check orthogonality for basis (pyEXP style) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="925" column="15"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1a862b82f17985a1002130ea7d735f3210" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::map&lt; std::string, std::string &gt;</type>
-        <definition>static std::map&lt; std::string, std::string &gt; EmpCylSL::cacheInfo</definition>
-        <argsstring>(const std::string &amp;cachefile, bool verbose=true)</argsstring>
-        <name>cacheInfo</name>
-        <qualifiedname>EmpCylSL::cacheInfo</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>cachefile</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>true</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Read and print the cache and return the header parameters as a map/dictionary </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="809" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1a686c18b7deb23a96b0608d96a7d13164" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_emp_cyl_s_l_1_1_axi_disk" kindref="compound">AxiDisk</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;AxiDisk&gt; EmpCylSL::AxiDiskPtr</definition>
-        <argsstring></argsstring>
-        <name>AxiDiskPtr</name>
-        <qualifiedname>EmpCylSL::AxiDiskPtr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="388" column="27" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="388" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1a72d8726715739ecffdfe29e5c8569cbc" prot="public" static="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>using EmpCylSL::ContribArray =  std::vector&lt;Eigen::VectorXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>ContribArray</name>
-        <qualifiedname>EmpCylSL::ContribArray</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      </memberdef>
-      <memberdef kind="enum" id="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07f" prot="public" static="no" strong="no">
-        <type></type>
-        <name>EmpModel</name>
-        <qualifiedname>EmpCylSL::EmpModel</qualifiedname>
-        <enumvalue id="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa3371db82e8230c5a156ba0bb2b31bef5" prot="public">
-          <name>Exponential</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa371f52b51dc8b5b0aeb0d215b04000bd" prot="public">
-          <name>Gaussian</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa9bd88c8027e6d12627cae69439530779" prot="public">
-          <name>Plummer</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa3cc496a7b14b9c9ede3f215514ab2302" prot="public">
-          <name>Power</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07fa67567924e95e58ef6bb9ecd65d96a077" prot="public">
-          <name>Deproject</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-<para>Type of density model to use. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="354" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="354" bodyend="360"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1a61332ab2df1dc74abdf9d54223809929" prot="public" static="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>using EmpCylSL::MatrixM =  std::vector&lt;Eigen::MatrixXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>MatrixM</name>
-        <qualifiedname>EmpCylSL::MatrixM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="47" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="47" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1ae28c1cae7b3574cb457c8e1e00a094af" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref> &gt;</type>
-        <definition>using EmpCylSL::SLGridSphPtr =  std::shared_ptr&lt;SLGridSph&gt;</definition>
-        <argsstring></argsstring>
-        <name>SLGridSphPtr</name>
-        <qualifiedname>EmpCylSL::SLGridSphPtr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="45" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="45" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1a5f02b326041b8aa3527a4a22b0505f73" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref> &gt;</type>
-        <definition>using EmpCylSL::SphModTblPtr =  std::shared_ptr&lt;SphericalModelTable&gt;</definition>
-        <argsstring></argsstring>
-        <name>SphModTblPtr</name>
-        <qualifiedname>EmpCylSL::SphModTblPtr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="44" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="enum" id="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793" prot="public" static="no" strong="no">
-        <type></type>
-        <name>TKType</name>
-        <qualifiedname>EmpCylSL::TKType</qualifiedname>
-        <enumvalue id="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793afab918d81116908252f64b5c7e2eaa99" prot="public">
-          <name>Hall</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-<para>Tapered signal-to-noise as defined by Hall <linebreak/>
- </para>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793aaef8f7277ef603757d44900f96e17d67" prot="public">
-          <name>Truncate</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-<para><ref refid="class_truncated" kindref="compound">Truncated</ref> signal-to-noise <linebreak/>
- </para>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_emp_cyl_s_l_1abada8966096ea7f46f2162858326f793a955b9c65bb82613a6ed0a36482bfbded" prot="public">
-          <name>None</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-<para>Compute the S/N but do not modify coefficients <linebreak/>
- </para>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Enum listing the possible selection algorithms for coefficient selection </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="347" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="347" bodyend="351"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1a54a8c779ca2381397fa7c8007094e411" prot="public" static="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>using EmpCylSL::VectorM =  std::vector&lt;Eigen::VectorXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>VectorM</name>
-        <qualifiedname>EmpCylSL::VectorM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="46" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-type">
-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1a51068281e8060eadcd0251bbcb73150c" prot="protected" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_emp_cyl_s_l_1_1_p_c_abasis" kindref="compound">PCAbasis</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;PCAbasis&gt; EmpCylSL::PCAbasisPtr</definition>
-        <argsstring></argsstring>
-        <name>PCAbasisPtr</name>
-        <qualifiedname>EmpCylSL::PCAbasisPtr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="317" column="27" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="317" bodyend="-1"/>
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-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1a97c584dfe52e938ff4511176367bbaee" prot="protected" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_emp_cyl_s_l_1_1_p_c_aelement" kindref="compound">PCAelement</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;PCAelement&gt; EmpCylSL::PCAelemPtr</definition>
-        <argsstring></argsstring>
-        <name>PCAelemPtr</name>
-        <qualifiedname>EmpCylSL::PCAelemPtr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="285" column="27" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="285" bodyend="-1"/>
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-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1a360d9bdaed1954ce3a2106fea01dcab9" prot="protected" static="no">
-        <type>std::vector&lt; std::vector&lt; std::vector&lt; std::vector&lt; double &gt; &gt; &gt; &gt;</type>
-        <definition>using EmpCylSL::VarMat =  std::vector&lt; std::vector&lt; std::vector&lt; std::vector&lt;double&gt; &gt; &gt; &gt;</definition>
-        <argsstring></argsstring>
-        <name>VarMat</name>
-        <qualifiedname>EmpCylSL::VarMat</qualifiedname>
-        <briefdescription>
-<para>EOF variance computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="95" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="95" bodyend="-1"/>
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-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1aef3ae77896a94fd792bfda35b6b4bfe5" prot="protected" static="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::VectorXd &gt; &gt;</type>
-        <definition>typedef std::vector&lt;std::vector&lt;Eigen::VectorXd&gt; &gt; EmpCylSL::VectorD2</definition>
-        <argsstring></argsstring>
-        <name>VectorD2</name>
-        <qualifiedname>EmpCylSL::VectorD2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="129" column="23" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="129" bodyend="-1"/>
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-      <memberdef kind="typedef" id="class_emp_cyl_s_l_1ab920a867dad05729d3b2aa3e6f13cb78" prot="protected" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_emp_cyl_s_l_1aef3ae77896a94fd792bfda35b6b4bfe5" kindref="member">VectorD2</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;VectorD2&gt; EmpCylSL::VectorD2ptr</definition>
-        <argsstring></argsstring>
-        <name>VectorD2ptr</name>
-        <qualifiedname>EmpCylSL::VectorD2ptr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="130" column="27" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="130" bodyend="-1"/>
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-    </sectiondef>
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-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; EmpCylSL::accum_cos</definition>
-        <argsstring></argsstring>
-        <name>accum_cos</name>
-        <qualifiedname>EmpCylSL::accum_cos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="157" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="157" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1ae0476e0a062bbdafcb8a953545e12ac1" compoundref="_emp_cyl_s_l_8_h" startline="915" endline="919">sanity</referencedby>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a7a9a5f30a82f1540107d6e5c0dcb3ccd" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; EmpCylSL::accum_sin</definition>
-        <argsstring></argsstring>
-        <name>accum_sin</name>
-        <qualifiedname>EmpCylSL::accum_sin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="158" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="158" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double EmpCylSL::ASCALE</definition>
-        <argsstring></argsstring>
-        <name>ASCALE</name>
-        <qualifiedname>EmpCylSL::ASCALE</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="75" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="75" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1a17510668f28e08910262d470b7e1c36b" compoundref="_emp_cyl_s_l_8_h" startline="759" endline="759">get_ascale</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ab771f6442cb98992024f528d9711004e" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string EmpCylSL::cachefile</definition>
-        <argsstring></argsstring>
-        <name>cachefile</name>
-        <qualifiedname>EmpCylSL::cachefile</qualifiedname>
-        <briefdescription>
-<para>The cache file name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="238" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="238" bodyend="-1"/>
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-        <type>struct <ref refid="struct_cyl_coef_header" kindref="compound">CylCoefHeader</ref></type>
-        <definition>struct CylCoefHeader EmpCylSL::coefheadercyl</definition>
-        <argsstring></argsstring>
-        <name>coefheadercyl</name>
-        <qualifiedname>EmpCylSL::coefheadercyl</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="52" column="22" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="52" bodyend="-1"/>
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-        <type>std::vector&lt; short &gt;</type>
-        <definition>std::vector&lt;short&gt; EmpCylSL::coefs_made</definition>
-        <argsstring></argsstring>
-        <name>coefs_made</name>
-        <qualifiedname>EmpCylSL::coefs_made</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="213" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="213" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1a010b121e9d91a34a9698e670b6bbb7bc" compoundref="_emp_cyl_s_l_8_h" startline="621" endline="626">coefs_made_all</referencedby>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ab415413271f771c89d825134bb946ee3" prot="protected" static="no" mutable="no">
-        <type><ref refid="struct_emp_cyl_s_l_1_1_mstep_array" kindref="compound">MstepArray</ref></type>
-        <definition>MstepArray EmpCylSL::cosL</definition>
-        <argsstring></argsstring>
-        <name>cosL</name>
-        <qualifiedname>EmpCylSL::cosL</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="152" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="152" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ab17784aafefb2d23b269b10b0aebba76" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; EmpCylSL::cosm</definition>
-        <argsstring></argsstring>
-        <name>cosm</name>
-        <qualifiedname>EmpCylSL::cosm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmpCylSL::MPIin</definition>
-        <argsstring></argsstring>
-        <name>MPIin</name>
-        <qualifiedname>EmpCylSL::MPIin</qualifiedname>
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-<para>Storage buffers for MPI. </para>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmpCylSL::MPIin2</definition>
-        <argsstring></argsstring>
-        <name>MPIin2</name>
-        <qualifiedname>EmpCylSL::MPIin2</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmpCylSL::MPIin_eof</definition>
-        <argsstring></argsstring>
-        <name>MPIin_eof</name>
-        <qualifiedname>EmpCylSL::MPIin_eof</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmpCylSL::MPIout</definition>
-        <argsstring></argsstring>
-        <name>MPIout</name>
-        <qualifiedname>EmpCylSL::MPIout</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmpCylSL::MPIout2</definition>
-        <argsstring></argsstring>
-        <name>MPIout2</name>
-        <qualifiedname>EmpCylSL::MPIout2</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmpCylSL::MPIout_eof</definition>
-        <argsstring></argsstring>
-        <name>MPIout_eof</name>
-        <qualifiedname>EmpCylSL::MPIout_eof</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ae4d1454f185faf1bbb801782da5add80" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::MPItable</definition>
-        <argsstring></argsstring>
-        <name>MPItable</name>
-        <qualifiedname>EmpCylSL::MPItable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a1966b7be886e21c19de9945e84cf1996" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned EmpCylSL::nbodstot</definition>
-        <argsstring></argsstring>
-        <name>nbodstot</name>
-        <qualifiedname>EmpCylSL::nbodstot</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="62" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="62" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1a7f48386e3f921bde7ec151270ec78650" compoundref="_emp_cyl_s_l_8_h" startline="772" endline="804">setHall</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1a9a192aad1ace6a1bc46cb96e7ae13ec2" compoundref="_emp_cyl_s_l_8_h" startline="898" endline="900">setTotal</referencedby>
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-        <type>int</type>
-        <definition>int EmpCylSL::Neven</definition>
-        <argsstring></argsstring>
-        <name>Neven</name>
-        <qualifiedname>EmpCylSL::Neven</qualifiedname>
-        <briefdescription>
-<para>Number of even and odd terms per subspace. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>int</type>
-        <definition>int EmpCylSL::NKEEP</definition>
-        <argsstring></argsstring>
-        <name>NKEEP</name>
-        <qualifiedname>EmpCylSL::NKEEP</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="60" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="60" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1aaef776ee74e1bf29c608b6e635111049" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::NLIM</definition>
-        <argsstring></argsstring>
-        <name>NLIM</name>
-        <qualifiedname>EmpCylSL::NLIM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="58" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="58" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1adcff853a8bc392ce63ec4f2ba5f13cfd" compoundref="_emp_cyl_s_l_8_h" startline="531" endline="531">set_nrange</referencedby>
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-        <type>int</type>
-        <definition>int EmpCylSL::NMAX</definition>
-        <argsstring></argsstring>
-        <name>NMAX</name>
-        <qualifiedname>EmpCylSL::NMAX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="54" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="54" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a6ec0b65d4efab53a29c62d0afb8fb91d" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::NMIN</definition>
-        <argsstring></argsstring>
-        <name>NMIN</name>
-        <qualifiedname>EmpCylSL::NMIN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="58" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="58" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1adcff853a8bc392ce63ec4f2ba5f13cfd" compoundref="_emp_cyl_s_l_8_h" startline="531" endline="531">set_nrange</referencedby>
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-        <type>int</type>
-        <definition>int EmpCylSL::Nodd</definition>
-        <argsstring></argsstring>
-        <name>Nodd</name>
-        <qualifiedname>EmpCylSL::Nodd</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>int</type>
-        <definition>int EmpCylSL::NORDER</definition>
-        <argsstring></argsstring>
-        <name>NORDER</name>
-        <qualifiedname>EmpCylSL::NORDER</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="59" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="59" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1a54a291607a6a7439668c32431496fe9f" compoundref="_emp_cyl_s_l_8_h" startline="549" endline="549">get_order</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1adc57fe7deeda26444f065e444814b105" compoundref="_emp_cyl_s_l_8_h" startline="822" endline="835">getDensC</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1a99e22052f40b08a7a87f8ff89541cf45" compoundref="_emp_cyl_s_l_8_h" startline="837" endline="850">getDensS</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1a733b36fdc7a0bb9b6b57f067eb75d925" compoundref="_emp_cyl_s_l_8_h" startline="853" endline="866">getPotlC</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1abca06e6140ca55efa1162089b8346b68" compoundref="_emp_cyl_s_l_8_h" startline="868" endline="881">getPotlS</referencedby>
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-        <type>std::vector&lt; unsigned &gt;</type>
-        <definition>std::vector&lt;unsigned&gt; EmpCylSL::numbT</definition>
-        <argsstring></argsstring>
-        <name>numbT</name>
-        <qualifiedname>EmpCylSL::numbT</qualifiedname>
-        <briefdescription>
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-        </inbodydescription>
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-        <type>std::vector&lt; std::vector&lt; unsigned &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;unsigned&gt; &gt; EmpCylSL::numbT1</definition>
-        <argsstring></argsstring>
-        <name>numbT1</name>
-        <qualifiedname>EmpCylSL::numbT1</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <definition>SLGridSphPtr EmpCylSL::ortho</definition>
-        <argsstring></argsstring>
-        <name>ortho</name>
-        <qualifiedname>EmpCylSL::ortho</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
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-        <argsstring></argsstring>
-        <name>p</name>
-        <qualifiedname>EmpCylSL::p</qualifiedname>
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-        <definition>PCAbasisPtr EmpCylSL::pb</definition>
-        <argsstring></argsstring>
-        <name>pb</name>
-        <qualifiedname>EmpCylSL::pb</qualifiedname>
-        <briefdescription>
-<para>Cache PCA information between calls. </para>
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-        <type>double</type>
-        <definition>double EmpCylSL::pfac</definition>
-        <argsstring></argsstring>
-        <name>pfac</name>
-        <qualifiedname>EmpCylSL::pfac</qualifiedname>
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-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; EmpCylSL::potC</definition>
-        <argsstring></argsstring>
-        <name>potC</name>
-        <qualifiedname>EmpCylSL::potC</qualifiedname>
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-        <detaileddescription>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd EmpCylSL::potd</definition>
-        <argsstring></argsstring>
-        <name>potd</name>
-        <qualifiedname>EmpCylSL::potd</qualifiedname>
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-        <inbodydescription>
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-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; EmpCylSL::potS</definition>
-        <argsstring></argsstring>
-        <name>potS</name>
-        <qualifiedname>EmpCylSL::potS</qualifiedname>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmpCylSL::r</definition>
-        <argsstring></argsstring>
-        <name>r</name>
-        <qualifiedname>EmpCylSL::r</qualifiedname>
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-        <type>int</type>
-        <definition>int EmpCylSL::rank2</definition>
-        <argsstring></argsstring>
-        <name>rank2</name>
-        <qualifiedname>EmpCylSL::rank2</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <type>int</type>
-        <definition>int EmpCylSL::rank3</definition>
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-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; EmpCylSL::rforceC</definition>
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-        <name>rforceC</name>
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-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; EmpCylSL::rforceS</definition>
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-        <name>Rtable</name>
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-        <argsstring></argsstring>
-        <name>SCo</name>
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-        <definition>MstepArray EmpCylSL::sinL</definition>
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-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; EmpCylSL::sinm</definition>
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-        <name>sinm</name>
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-        <definition>MstepArray EmpCylSL::sinN</definition>
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-        <name>sinN</name>
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-        <definition>MPI_Status EmpCylSL::status</definition>
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-        <name>status</name>
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-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a554140e8382732014abb3e95f8c54f91" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; EmpCylSL::vc</definition>
-        <argsstring></argsstring>
-        <name>vc</name>
-        <qualifiedname>EmpCylSL::vc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="203" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="203" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a67a63f563459749ff1d353c9debce1ad" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; EmpCylSL::vs</definition>
-        <argsstring></argsstring>
-        <name>vs</name>
-        <qualifiedname>EmpCylSL::vs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="203" column="18" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="203" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ae7a9188b6870dbc7e3b071961fafd51f" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::XMAX</definition>
-        <argsstring></argsstring>
-        <name>XMAX</name>
-        <qualifiedname>EmpCylSL::XMAX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="110" column="22" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="110" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a19936b6c0bcde061a1aa72cec91f0ff5" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::XMIN</definition>
-        <argsstring></argsstring>
-        <name>XMIN</name>
-        <qualifiedname>EmpCylSL::XMIN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="110" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="110" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a5b3feb166e2e84e61233a42324d046d4" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::YMAX</definition>
-        <argsstring></argsstring>
-        <name>YMAX</name>
-        <qualifiedname>EmpCylSL::YMAX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="65" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="65" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ae5c75b53f89ace4de21856f24d0648f0" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::YMIN</definition>
-        <argsstring></argsstring>
-        <name>YMIN</name>
-        <qualifiedname>EmpCylSL::YMIN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="65" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="65" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1aa7c0b484a9d7085e0335beb11ee1c76a" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; EmpCylSL::zforceC</definition>
-        <argsstring></argsstring>
-        <name>zforceC</name>
-        <qualifiedname>EmpCylSL::zforceC</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="115" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="115" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a7a1ac165e19334b4603046105628e1eb" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; EmpCylSL::zforceS</definition>
-        <argsstring></argsstring>
-        <name>zforceS</name>
-        <qualifiedname>EmpCylSL::zforceS</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="120" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="120" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-static-attrib">
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1aaae6d0d738e28ae17f0450ac8888ff38" prot="protected" static="yes" mutable="no">
-        <type>const unsigned int</type>
-        <definition>const unsigned int EmpCylSL::cmagic</definition>
-        <argsstring></argsstring>
-        <name>cmagic</name>
-        <qualifiedname>EmpCylSL::cmagic</qualifiedname>
-        <initializer>= 0xc0a57a3</initializer>
-        <briefdescription>
-<para>Coefficient magic number. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="211" column="36" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="211" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ac1da77e65816b15f8514d8869b8bdcc3" prot="protected" static="yes" mutable="no">
-        <type>const unsigned int</type>
-        <definition>const unsigned int EmpCylSL::hmagic</definition>
-        <argsstring></argsstring>
-        <name>hmagic</name>
-        <qualifiedname>EmpCylSL::hmagic</qualifiedname>
-        <initializer>= 0xc0a57a1</initializer>
-        <briefdescription>
-<para><ref refid="class_basis" kindref="compound">Basis</ref> magic number. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="208" column="36" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="208" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a0f441f656522cec142a0576d0b8712b9" prot="protected" static="yes" mutable="no">
-        <type>const std::string</type>
-        <definition>const std::string EmpCylSL::Version</definition>
-        <argsstring></argsstring>
-        <name>Version</name>
-        <qualifiedname>EmpCylSL::Version</qualifiedname>
-        <initializer>= &quot;1.0&quot;</initializer>
-        <briefdescription>
-<para>Cache versioning. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="235" column="35" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="235" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a69cea546b093407c96f564e9e4fc132a" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::CMAPR</definition>
-        <argsstring></argsstring>
-        <name>CMAPR</name>
-        <qualifiedname>EmpCylSL::CMAPR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>TRUE if we are using coordinate mapping (0=no, 1 rational-function mapping (default) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="407" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="407" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a56526a140c4c34248902966681124db2" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::CMAPZ</definition>
-        <argsstring></argsstring>
-        <name>CMAPZ</name>
-        <qualifiedname>EmpCylSL::CMAPZ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>TRUE if we are using coordinate mapping (0=no, 1 for vertical hyberbolic mapping (default), 2 for power mampping) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="411" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="411" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a7b1705c7239daa9a9274ea07cc687ea8" prot="public" static="yes" mutable="no">
-        <type>std::map&lt; <ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07f" kindref="member">EmpModel</ref>, std::string &gt;</type>
-        <definition>std::map&lt;EmpModel, std::string&gt; EmpCylSL::EmpModelLabs</definition>
-        <argsstring></argsstring>
-        <name>EmpModelLabs</name>
-        <qualifiedname>EmpCylSL::EmpModelLabs</qualifiedname>
-        <briefdescription>
-<para>Convert EmpModel to ascii label. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="457" column="19" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="457" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ae63d3655cdce09b95b3d656b3fb2b1bd" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCylSL::enforce_limits</definition>
-        <argsstring></argsstring>
-        <name>enforce_limits</name>
-        <qualifiedname>EmpCylSL::enforce_limits</qualifiedname>
-        <briefdescription>
-<para>No extrapolating beyond grid (default: false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="417" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="417" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1afb2e483e8e61f9b89e6e60c5a9042c71" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::HALLFREQ</definition>
-        <argsstring></argsstring>
-        <name>HALLFREQ</name>
-        <qualifiedname>EmpCylSL::HALLFREQ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Selector output freq (this only affects diagnostic output). Current default is to perform Hall on every step when selected </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="436" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="436" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ababc9c96aa1aafb45b9eac7d5870e127" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::HEXP</definition>
-        <argsstring></argsstring>
-        <name>HEXP</name>
-        <qualifiedname>EmpCylSL::HEXP</qualifiedname>
-        <briefdescription>
-<para>Hall smoothing exponent (default: 1.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="439" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="439" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a010b7760c0b40c5c7eb43f0913d75f9f" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::HFAC</definition>
-        <argsstring></argsstring>
-        <name>HFAC</name>
-        <qualifiedname>EmpCylSL::HFAC</qualifiedname>
-        <briefdescription>
-<para>Fraction of table range for basis images (for debug) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="460" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="460" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a448caae9d6d4f439c18ca51d9bebe478" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCylSL::logarithmic</definition>
-        <argsstring></argsstring>
-        <name>logarithmic</name>
-        <qualifiedname>EmpCylSL::logarithmic</qualifiedname>
-        <briefdescription>
-<para>TRUE if mapping is logarithmic (default: false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="414" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="414" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1acab556b4b8f88e42950851f45fd4eaf5" prot="public" static="yes" mutable="no">
-        <type><ref refid="class_emp_cyl_s_l_1a5b083f6c14375b69853fc29b6b6df07f" kindref="member">EmpModel</ref></type>
-        <definition>EmpModel EmpCylSL::mtype</definition>
-        <argsstring></argsstring>
-        <name>mtype</name>
-        <qualifiedname>EmpCylSL::mtype</qualifiedname>
-        <briefdescription>
-<para>Density model type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="420" column="19" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="420" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1adc51b0fb5f7e79e450d931ba715e75ab" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCylSL::NewCache</definition>
-        <argsstring></argsstring>
-        <name>NewCache</name>
-        <qualifiedname>EmpCylSL::NewCache</qualifiedname>
-        <briefdescription>
-<para>Use YAML header in cache file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="451" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="451" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a62e259dd548f50712047634709d45b29" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCylSL::NewCoefs</definition>
-        <argsstring></argsstring>
-        <name>NewCoefs</name>
-        <qualifiedname>EmpCylSL::NewCoefs</qualifiedname>
-        <briefdescription>
-<para>Use YAML header in coefficient file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="454" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="454" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a3a514d4baf7c51ad65ae9c0934313b08" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::NOUT</definition>
-        <argsstring></argsstring>
-        <name>NOUT</name>
-        <qualifiedname>EmpCylSL::NOUT</qualifiedname>
-        <briefdescription>
-<para>Number of bases to print (for debug) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="429" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="429" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1aafe9d97b940c6bf5a322784c53d49b5f" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::NUMR</definition>
-        <argsstring></argsstring>
-        <name>NUMR</name>
-        <qualifiedname>EmpCylSL::NUMR</qualifiedname>
-        <briefdescription>
-<para>Number of entries in radial basis table. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="432" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="432" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a3c5efbaa5c0823fa2df420dbb4ad701c" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::NUMX</definition>
-        <argsstring></argsstring>
-        <name>NUMX</name>
-        <qualifiedname>EmpCylSL::NUMX</qualifiedname>
-        <briefdescription>
-<para>Radial basis grid in radial direction. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="423" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="423" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1adc57fe7deeda26444f065e444814b105" compoundref="_emp_cyl_s_l_8_h" startline="822" endline="835">getDensC</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1a99e22052f40b08a7a87f8ff89541cf45" compoundref="_emp_cyl_s_l_8_h" startline="837" endline="850">getDensS</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1a733b36fdc7a0bb9b6b57f067eb75d925" compoundref="_emp_cyl_s_l_8_h" startline="853" endline="866">getPotlC</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1abca06e6140ca55efa1162089b8346b68" compoundref="_emp_cyl_s_l_8_h" startline="868" endline="881">getPotlS</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a3ca5a4b84952e41185bc851f0b0a4310" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int EmpCylSL::NUMY</definition>
-        <argsstring></argsstring>
-        <name>NUMY</name>
-        <qualifiedname>EmpCylSL::NUMY</qualifiedname>
-        <briefdescription>
-<para>Radial basis grid in vertical direction. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="426" column="14" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="426" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1adc57fe7deeda26444f065e444814b105" compoundref="_emp_cyl_s_l_8_h" startline="822" endline="835">getDensC</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1a99e22052f40b08a7a87f8ff89541cf45" compoundref="_emp_cyl_s_l_8_h" startline="837" endline="850">getDensS</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1a733b36fdc7a0bb9b6b57f067eb75d925" compoundref="_emp_cyl_s_l_8_h" startline="853" endline="866">getPotlC</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1abca06e6140ca55efa1162089b8346b68" compoundref="_emp_cyl_s_l_8_h" startline="868" endline="881">getPotlS</referencedby>
-      </memberdef>
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-        <type>bool</type>
-        <definition>bool EmpCylSL::PCADRY</definition>
-        <argsstring></argsstring>
-        <name>PCADRY</name>
-        <qualifiedname>EmpCylSL::PCADRY</qualifiedname>
-        <briefdescription>
-<para>Compute taper but to not apply to coefficients (default: true) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="400" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="400" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ad1c941f70ba409b1267a5c602192a06f" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCylSL::PCAEOF</definition>
-        <argsstring></argsstring>
-        <name>PCAEOF</name>
-        <qualifiedname>EmpCylSL::PCAEOF</qualifiedname>
-        <briefdescription>
-<para>TRUE if EOF diagnostics are on (default: false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="397" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="397" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1a7f48386e3f921bde7ec151270ec78650" compoundref="_emp_cyl_s_l_8_h" startline="772" endline="804">setHall</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a7421fd16b5bc2b716abdadeb2ee4fbda" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCylSL::PCAVAR</definition>
-        <argsstring></argsstring>
-        <name>PCAVAR</name>
-        <qualifiedname>EmpCylSL::PCAVAR</qualifiedname>
-        <briefdescription>
-<para>TRUE if signal-to-noise methods are on (default: false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a591fc0a920c89c08db6e8cdeb288daf5" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool EmpCylSL::PCAVTK</definition>
-        <argsstring></argsstring>
-        <name>PCAVTK</name>
-        <qualifiedname>EmpCylSL::PCAVTK</qualifiedname>
-        <briefdescription>
-<para>TRUE if VTK diagnostics are on (default: false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="394" column="15" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="394" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1ac9e89c53c5668ec51122f129aea8d203" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::PPOW</definition>
-        <argsstring></argsstring>
-        <name>PPOW</name>
-        <qualifiedname>EmpCylSL::PPOW</qualifiedname>
-        <briefdescription>
-<para>Power exponent for EOF conditioning density function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="448" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="448" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a3e03b95b63b369896cbbaf74d0b6ccda" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::RMAX</definition>
-        <argsstring></argsstring>
-        <name>RMAX</name>
-        <qualifiedname>EmpCylSL::RMAX</qualifiedname>
-        <briefdescription>
-<para>Maximum radial value for basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="445" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="445" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a881a2feeaab884247de5ea52a244a957" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::RMIN</definition>
-        <argsstring></argsstring>
-        <name>RMIN</name>
-        <qualifiedname>EmpCylSL::RMIN</qualifiedname>
-        <briefdescription>
-<para>Minimum radial value for basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="442" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="442" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_emp_cyl_s_l_1a5fb42c68731465996008ec4276d458d5" prot="public" static="yes" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned EmpCylSL::VFLAG</definition>
-        <argsstring></argsstring>
-        <name>VFLAG</name>
-        <qualifiedname>EmpCylSL::VFLAG</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Verbose level flags bit Action <hruler/>
- 0 = quiet 1 = SL model output 2 = EOF diagnostics 4 = Accumulation, PCA Hall, and all other diagnostics 8 = Debug-level communication details 16 = Timing info </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="472" column="19" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="472" bodyend="-1"/>
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-        <type>unsigned</type>
-        <definition>unsigned EmpCylSL::VTKFRQ</definition>
-        <argsstring></argsstring>
-        <name>VTKFRQ</name>
-        <qualifiedname>EmpCylSL::VTKFRQ</qualifiedname>
-        <briefdescription>
-<para>VTK diagnostic frequency (default: false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="403" column="19" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="403" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void EmpCylSL::accumulate_eof_thread_call</definition>
-        <argsstring>(int id, std::vector&lt; Particle &gt; *p, bool verbose)</argsstring>
-        <name>accumulate_eof_thread_call</name>
-        <qualifiedname>EmpCylSL::accumulate_eof_thread_call</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; *</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-        </param>
-        <briefdescription>
-<para>Thread body for eof accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="328" column="8"/>
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-        <type>void</type>
-        <definition>void EmpCylSL::accumulate_thread_call</definition>
-        <argsstring>(int id, std::vector&lt; Particle &gt; *p, int mlevel, bool verbose)</argsstring>
-        <name>accumulate_thread_call</name>
-        <qualifiedname>EmpCylSL::accumulate_thread_call</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; *</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mlevel</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-        </param>
-        <briefdescription>
-<para>Thread body for coef accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="325" column="8"/>
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-        <type>int</type>
-        <definition>int EmpCylSL::cache_grid</definition>
-        <argsstring>(int, std::string file)</argsstring>
-        <name>cache_grid</name>
-        <qualifiedname>EmpCylSL::cache_grid</qualifiedname>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <type>void</type>
-        <definition>void EmpCylSL::compute_eof_grid</definition>
-        <argsstring>(int request_id, int m)</argsstring>
-        <name>compute_eof_grid</name>
-        <qualifiedname>EmpCylSL::compute_eof_grid</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>request_id</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="221" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1a57d043d255d6b3a9a30c2be6bbbcb329" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::compute_even_odd</definition>
-        <argsstring>(int request_id, int m)</argsstring>
-        <name>compute_even_odd</name>
-        <qualifiedname>EmpCylSL::compute_even_odd</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>request_id</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="222" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1adc40eee109b96edacb4bcf58e34cf881" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::densR</definition>
-        <argsstring>(double R)</argsstring>
-        <name>densR</name>
-        <qualifiedname>EmpCylSL::densR</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void EmpCylSL::eigen_problem</definition>
-        <argsstring>(int request_id, int M, Timer &amp;timer)</argsstring>
-        <name>eigen_problem</name>
-        <qualifiedname>EmpCylSL::eigen_problem</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>request_id</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type><ref refid="class_timer" kindref="compound">Timer</ref> &amp;</type>
-          <declname>timer</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="223" column="8"/>
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-        <type>void</type>
-        <definition>void EmpCylSL::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;, Eigen::MatrixXd &amp;, double, double)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>EmpCylSL::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
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-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double EmpCylSL::integral</definition>
-        <argsstring>(int, int, int, int)</argsstring>
-        <name>integral</name>
-        <qualifiedname>EmpCylSL::integral</qualifiedname>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>int</type>
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-        <briefdescription>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <type>void</type>
-        <definition>void EmpCylSL::make_grid</definition>
-        <argsstring>()</argsstring>
-        <name>make_grid</name>
-        <qualifiedname>EmpCylSL::make_grid</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <type><ref refid="class_emp_cyl_s_l_1a5f02b326041b8aa3527a4a22b0505f73" kindref="member">SphModTblPtr</ref></type>
-        <definition>SphModTblPtr EmpCylSL::make_sl</definition>
-        <argsstring>()</argsstring>
-        <name>make_sl</name>
-        <qualifiedname>EmpCylSL::make_sl</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double EmpCylSL::massR</definition>
-        <argsstring>(double R)</argsstring>
-        <name>massR</name>
-        <qualifiedname>EmpCylSL::massR</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <type>void</type>
-        <definition>void EmpCylSL::parityCheck</definition>
-        <argsstring>(const std::string &amp;prefix)</argsstring>
-        <name>parityCheck</name>
-        <qualifiedname>EmpCylSL::parityCheck</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>prefix</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>bool</type>
-        <definition>bool EmpCylSL::ReadH5Cache</definition>
-        <argsstring>()</argsstring>
-        <name>ReadH5Cache</name>
-        <qualifiedname>EmpCylSL::ReadH5Cache</qualifiedname>
-        <briefdescription>
-<para>Read HDF5 cache. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <type>void</type>
-        <definition>void EmpCylSL::receive_eof</definition>
-        <argsstring>(int request_id, int m)</argsstring>
-        <name>receive_eof</name>
-        <qualifiedname>EmpCylSL::receive_eof</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>request_id</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
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-        <type>void</type>
-        <definition>void EmpCylSL::send_eof_grid</definition>
-        <argsstring>()</argsstring>
-        <name>send_eof_grid</name>
-        <qualifiedname>EmpCylSL::send_eof_grid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void EmpCylSL::setup_eof_grid</definition>
-        <argsstring>(void)</argsstring>
-        <name>setup_eof_grid</name>
-        <qualifiedname>EmpCylSL::setup_eof_grid</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="225" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1ae2b67b9d3e70ccf7e285d06a7b8a9ea5" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::WriteH5Cache</definition>
-        <argsstring>()</argsstring>
-        <name>WriteH5Cache</name>
-        <qualifiedname>EmpCylSL::WriteH5Cache</qualifiedname>
-        <briefdescription>
-<para>Write HDF5 cache. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="229" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-static-func">
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a174b3c5c2d43c1c92ae475a2e9bd5768" prot="protected" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>YAML::Node</type>
-        <definition>static YAML::Node EmpCylSL::getHeader</definition>
-        <argsstring>(const std::string &amp;cachefile)</argsstring>
-        <name>getHeader</name>
-        <qualifiedname>EmpCylSL::getHeader</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>cachefile</declname>
-        </param>
-        <briefdescription>
-<para>Read the cache and return YAML db. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="250" column="21"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1adbca4138f5230f4e2817376a73e33a1b" prot="protected" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>YAML::Node</type>
-        <definition>static YAML::Node EmpCylSL::getHeader_binary</definition>
-        <argsstring>(const std::string &amp;cachefile)</argsstring>
-        <name>getHeader_binary</name>
-        <qualifiedname>EmpCylSL::getHeader_binary</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>cachefile</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="252" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a28d96e9218fc77f4c9b65c2cc7142f3d" prot="protected" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>YAML::Node</type>
-        <definition>static YAML::Node EmpCylSL::getHeader_hdf5</definition>
-        <argsstring>(const std::string &amp;cachefile)</argsstring>
-        <name>getHeader_hdf5</name>
-        <qualifiedname>EmpCylSL::getHeader_hdf5</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>cachefile</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="251" column="21"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1a29c9054e96a255d4fba26ad01b79f553" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::accumulate</definition>
-        <argsstring>(double r, double z, double phi, double mass, unsigned long seq, int id, int mlev=0, bool compute=false)</argsstring>
-        <name>accumulate</name>
-        <qualifiedname>EmpCylSL::accumulate</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <param>
-          <type>unsigned long</type>
-          <declname>seq</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mlev</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>compute</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Add single particle to coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="654" column="8"/>
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-        <type>void</type>
-        <definition>void EmpCylSL::accumulate</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;p, int mlev=0, bool verbose=false, bool compute=false)</argsstring>
-        <name>accumulate</name>
-        <qualifiedname>EmpCylSL::accumulate</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mlev</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>compute</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Accumulate coefficients from particle distribution. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="639" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1a922d558463e3dd98e3d1bba0b193797c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::accumulate_eof</definition>
-        <argsstring>(double r, double z, double phi, double mass, int id, int mlev=0)</argsstring>
-        <name>accumulate_eof</name>
-        <qualifiedname>EmpCylSL::accumulate_eof</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mlev</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-<para>Add single particle to EOF coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="658" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ab7e13975e0b5e76a90d62b8173b2fd3a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::accumulate_eof</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;p, bool verbose=false)</argsstring>
-        <name>accumulate_eof</name>
-        <qualifiedname>EmpCylSL::accumulate_eof</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Make EOF from particle distribution. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="647" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a315b273faa77c0ce4a0d8470af77c31d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::accumulate_eof_thread</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;p, bool verbose=false)</argsstring>
-        <name>accumulate_eof_thread</name>
-        <qualifiedname>EmpCylSL::accumulate_eof_thread</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Make EOF from particle distribution by thread. Used by external applications. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="651" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a2eca026c8c9a47db68dde26ff99ca5e1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::accumulate_thread</definition>
-        <argsstring>(vector&lt; Particle &gt; &amp;p, int mlev=0, bool verbose=false)</argsstring>
-        <name>accumulate_thread</name>
-        <qualifiedname>EmpCylSL::accumulate_thread</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mlev</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Accumulate coefficients from particle distribution by thread. Used by external applications. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="644" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ae17f2940466adeeab60415fbb9a0a903" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::accumulated_dens_eval</definition>
-        <argsstring>(double r, double z, double phi, double &amp;d0)</argsstring>
-        <name>accumulated_dens_eval</name>
-        <qualifiedname>EmpCylSL::accumulated_dens_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>d0</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate density field. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="666" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a7f7f8c1328be01fbcfd2257ec617dae6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::accumulated_eval</definition>
-        <argsstring>(double r, double z, double phi, double &amp;p0, double &amp;p, double &amp;fr, double &amp;fz, double &amp;fp)</argsstring>
-        <name>accumulated_eval</name>
-        <qualifiedname>EmpCylSL::accumulated_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p0</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fz</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fp</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate potential and force field. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="662" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a18e0d78655361a9a734ad2e6df769d4d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::accumulated_midplane_eval</definition>
-        <argsstring>(double r, double zmin, double zmax, double phi, int num=40)</argsstring>
-        <name>accumulated_midplane_eval</name>
-        <qualifiedname>EmpCylSL::accumulated_midplane_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>zmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>num</declname>
-          <defval>40</defval>
-        </param>
-        <briefdescription>
-<para>Evaluate peak density height within two limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="669" column="10"/>
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-        <type>bool</type>
-        <definition>bool EmpCylSL::coefs_made_all</definition>
-        <argsstring>()</argsstring>
-        <name>coefs_made_all</name>
-        <qualifiedname>EmpCylSL::coefs_made_all</qualifiedname>
-        <briefdescription>
-<para>True if coefficients are made at all levels. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="621" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="621" bodyend="626"/>
-        <references refid="class_emp_cyl_s_l_1af20a77b1f4fd2c8e813d98711460e695" compoundref="_emp_cyl_s_l_8_h" startline="213">coefs_made</references>
-        <references refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" compoundref="_emp_cyl_s_l_8_h" startline="67">M</references>
-      </memberdef>
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-        <type>void</type>
-        <definition>void EmpCylSL::compare_basis</definition>
-        <argsstring>(const EmpCylSL *p)</argsstring>
-        <name>compare_basis</name>
-        <qualifiedname>EmpCylSL::compare_basis</qualifiedname>
-        <param>
-          <type>const <ref refid="class_emp_cyl_s_l" kindref="compound">EmpCylSL</ref> *</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Compare current basis with another for debugging. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="731" column="8"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1a791dca5c81aa700228f61cbe00327113" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::create_deprojection</definition>
-        <argsstring>(double H, double Rfactor, int numR, int numI, AxiDiskPtr func)</argsstring>
-        <name>create_deprojection</name>
-        <qualifiedname>EmpCylSL::create_deprojection</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>H</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Rfactor</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numR</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numI</declname>
-        </param>
-        <param>
-          <type><ref refid="class_emp_cyl_s_l_1a686c18b7deb23a96b0608d96a7d13164" kindref="member">AxiDiskPtr</ref></type>
-          <declname>func</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Compute deprojection of axisymmetric disk for and use this generate the EOF spherical basis. The scale length must be O(1) with scale height H in scale length units. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="564" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a142075bc56f2792e7f9427a1b20fe43e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::d_y_to_z</definition>
-        <argsstring>(double y)</argsstring>
-        <name>d_y_to_z</name>
-        <qualifiedname>EmpCylSL::d_y_to_z</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <briefdescription>
-<para>For measure transformation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="558" column="10"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1af4346551a09d18530b7cd80cec281110" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::determine_acceleration_and_potential</definition>
-        <argsstring>()</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>EmpCylSL::determine_acceleration_and_potential</qualifiedname>
-        <briefdescription>
-<para>Necessary member function currently unused (change design?) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="636" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="636" bodyend="636"/>
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-        <type>void</type>
-        <definition>void EmpCylSL::determine_coefficients</definition>
-        <argsstring>()</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>EmpCylSL::determine_coefficients</qualifiedname>
-        <briefdescription>
-<para>Necessary member function currently unused (change design?) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="633" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="633" bodyend="633"/>
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-      <memberdef kind="function" id="class_emp_cyl_s_l_1a6fbec197b1432a4ba8b565b613953add" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dump_basis</definition>
-        <argsstring>(const std::string &amp;name, int step, double Rmax=-1.0)</argsstring>
-        <name>dump_basis</name>
-        <qualifiedname>EmpCylSL::dump_basis</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>step</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Rmax</declname>
-          <defval>-1.0</defval>
-        </param>
-        <briefdescription>
-<para>Plot basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="706" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a667aeb1e86302010a4d0d9207e9b24fb" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dump_coefs</definition>
-        <argsstring>(std::ostream &amp;out)</argsstring>
-        <name>dump_coefs</name>
-        <qualifiedname>EmpCylSL::dump_coefs</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-<para>Dump out coefficients to output stream. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="700" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1aa3d995b136f2f8c713c3551dd14577a0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dump_coefs_binary</definition>
-        <argsstring>(std::ostream &amp;out, double time)</argsstring>
-        <name>dump_coefs_binary</name>
-        <qualifiedname>EmpCylSL::dump_coefs_binary</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>time</declname>
-        </param>
-        <briefdescription>
-<para>Dump out coefficients to stream in bianry format. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="703" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a232a9a2eac79772432cc3fc033ef46b7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dump_eof_file</definition>
-        <argsstring>(const std::string &amp;eof_file, const std::string &amp;dump_file)</argsstring>
-        <name>dump_eof_file</name>
-        <qualifiedname>EmpCylSL::dump_eof_file</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>eof_file</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>dump_file</declname>
-        </param>
-        <briefdescription>
-<para>Dump the EOF basis in ascii format. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="522" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a0e97a59d8de16ea6ed7059406a4dc4e2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dump_images</definition>
-        <argsstring>(const std::string &amp;OUTFILE, double XYOUT, double ZOUT, int OUTR, int OUTZ, bool logscale)</argsstring>
-        <name>dump_images</name>
-        <qualifiedname>EmpCylSL::dump_images</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>OUTFILE</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>XYOUT</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ZOUT</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>OUTR</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>OUTZ</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>logscale</declname>
-        </param>
-        <briefdescription>
-<para>Plot full fields for debugging. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="709" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1af268662f8998695185625f734f028a71" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dump_images_basis</definition>
-        <argsstring>(const std::string &amp;OUTFILE, double XYOUT, double ZOUT, int OUTR, int OUTZ, bool logscale, int M1, int M2, int N1, int N2)</argsstring>
-        <name>dump_images_basis</name>
-        <qualifiedname>EmpCylSL::dump_images_basis</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>OUTFILE</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>XYOUT</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ZOUT</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>OUTR</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>OUTZ</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>logscale</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M1</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M2</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N1</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N2</declname>
-        </param>
-        <briefdescription>
-<para>Plot basis images for debugging. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="714" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a85056f370f790a6f05c38319d5e407ff" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dump_images_basis_eof</definition>
-        <argsstring>(const std::string &amp;runtag, double XYOUT, double ZOUT, int OUTR, int OUTZ, int M, int N, int cnt, const Eigen::VectorXd &amp;tp)</argsstring>
-        <name>dump_images_basis_eof</name>
-        <qualifiedname>EmpCylSL::dump_images_basis_eof</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>runtag</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>XYOUT</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ZOUT</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>OUTR</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>OUTZ</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>cnt</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>tp</declname>
-        </param>
-        <briefdescription>
-<para>Plot EOF basis images for debugging. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="725" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a2f3e7464c373fa3c9d0a782b1e2187ff" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::dump_images_basis_pca</definition>
-        <argsstring>(const std::string &amp;runtag, double XYOUT, double ZOUT, int OUTR, int OUTZ, int M, int N, int cnt)</argsstring>
-        <name>dump_images_basis_pca</name>
-        <qualifiedname>EmpCylSL::dump_images_basis_pca</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>runtag</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>XYOUT</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ZOUT</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>OUTR</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>OUTZ</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>cnt</declname>
-        </param>
-        <briefdescription>
-<para>Plot PCA basis images for debugging. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="720" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1af99016daf180ebe406394ee57e3b9a16" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>EmpCylSL::EmpCylSL</definition>
-        <argsstring>()</argsstring>
-        <name>EmpCylSL</name>
-        <qualifiedname>EmpCylSL::EmpCylSL</qualifiedname>
-        <briefdescription>
-<para>Constructor (reset must called later) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="476" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a3a311372368aab409ba209051da72adc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>EmpCylSL::EmpCylSL</definition>
-        <argsstring>(int mlim, const std::string cache)</argsstring>
-        <name>EmpCylSL</name>
-        <qualifiedname>EmpCylSL::EmpCylSL</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mlim</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>cache</declname>
-        </param>
-        <briefdescription>
-<para>Construct from cache file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="505" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a080959b56ba7865b65f5c158f520d0c1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>EmpCylSL::EmpCylSL</definition>
-        <argsstring>(int numr, int lmax, int mmax, int nord, double ascale, double hscale, int Nodd, std::string cachename)</argsstring>
-        <name>EmpCylSL</name>
-        <qualifiedname>EmpCylSL::EmpCylSL</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nord</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ascale</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>hscale</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>Nodd</declname>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>cachename</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor with parameters</para>
-<para><simplesect kind="par"><title>Parameters:</title><para></para>
-</simplesect>
-<parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>multistep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of coefficient levels for n-body</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the spherical radial order of the input basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the spherical angular order of the input basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the output aximuthal order for the EOF basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nord</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the output radial order for the EOF basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ascale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the target disk scale LENGTH</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>hscale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the target disk scale HEIGHT</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nodd</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of vertically odd parity basis functions. If unspecified, you get eigenvalue order. </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="500" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1af9d845267ad87dcffa8de0ed18375a32" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::generate_eof</definition>
-        <argsstring>(int numr, int nump, int numt, std::function&lt; double(double, double, double, int)&gt; f)</argsstring>
-        <name>generate_eof</name>
-        <qualifiedname>EmpCylSL::generate_eof</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nump</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numt</declname>
-        </param>
-        <param>
-          <type>std::function&lt; double(double, double, double, int)&gt;</type>
-          <declname>f</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Generate EOF by direct integration conditioned on a user supplied function</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of radial knots </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nump</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of azimuthal knots </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numt</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of inclination knots </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>func</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the user-supplied density target function</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-If func is axisymmetric, you may use nump=1 to save computation time. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="577" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a35462b138d3301822560e2c42bd88751" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::get_all</definition>
-        <argsstring>(int m, int n, double r, double z, double phi, double &amp;p, double &amp;d, double &amp;fr, double &amp;fz, double &amp;fp)</argsstring>
-        <name>get_all</name>
-        <qualifiedname>EmpCylSL::get_all</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fz</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fp</declname>
-        </param>
-        <briefdescription>
-<para>Get a single basis function values for a phase-space point. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="581" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1adb2fa176ce9aad23f30408140174cbc1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::get_coefs</definition>
-        <argsstring>(int mm, Eigen::VectorXd &amp;cos1, Eigen::VectorXd &amp;sin1)</argsstring>
-        <name>get_coefs</name>
-        <qualifiedname>EmpCylSL::get_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mm</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>cos1</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>sin1</declname>
-        </param>
-        <briefdescription>
-<para>Get coefficients from Vectors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="686" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1aefdce8f742d10ee3833b9f57ac125d94" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::get_coefs</definition>
-        <argsstring>(int mm, std::vector&lt; double &gt; &amp;cos1, std::vector&lt; double &gt; &amp;sin1)</argsstring>
-        <name>get_coefs</name>
-        <qualifiedname>EmpCylSL::get_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mm</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>cos1</declname>
-        </param>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>sin1</declname>
-        </param>
-        <briefdescription>
-<para>Get coefficients from std::vectors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="689" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a7da7158d060f7d325bd5146d6f964cc0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int EmpCylSL::get_mlim</definition>
-        <argsstring>()</argsstring>
-        <name>get_mlim</name>
-        <qualifiedname>EmpCylSL::get_mlim</qualifiedname>
-        <briefdescription>
-<para>Get limit to mmax for testing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="546" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="546" bodyend="546"/>
-        <references refid="class_emp_cyl_s_l_1a450128216652014ea18eb6c325f04945" compoundref="_emp_cyl_s_l_8_h" startline="57">MLIM</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ab3bfa5b72ebb7dd2f3a44705de905b99" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int EmpCylSL::get_mmax</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_mmax</name>
-        <qualifiedname>EmpCylSL::get_mmax</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Parameter access: get mmax. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="528" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="528" bodyend="528"/>
-        <references refid="class_emp_cyl_s_l_1adf3f5b641c449a9d550b67b87c5dd91d" compoundref="_emp_cyl_s_l_8_h" startline="56">MMAX</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ae86d4dc7fab3032fbe588eea0bdd1d02" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int EmpCylSL::get_mmin</definition>
-        <argsstring>()</argsstring>
-        <name>get_mmin</name>
-        <qualifiedname>EmpCylSL::get_mmin</qualifiedname>
-        <briefdescription>
-<para>Get limit to mmax for testing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="543" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="543" bodyend="543"/>
-        <references refid="class_emp_cyl_s_l_1aff9c53fa3175a325355c0f6826dc18ec" compoundref="_emp_cyl_s_l_8_h" startline="57">MMIN</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a54a291607a6a7439668c32431496fe9f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int EmpCylSL::get_order</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_order</name>
-        <qualifiedname>EmpCylSL::get_order</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Parameter access: get norder. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="549" column="7" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="549" bodyend="549"/>
-        <references refid="class_emp_cyl_s_l_1a3c7aa119b8538a71a6504e5b3b99f7b1" compoundref="_emp_cyl_s_l_8_h" startline="59">NORDER</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1aa99910aeac9bd0bcc43b35092a18a9f7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::getMaxSNR</definition>
-        <argsstring>(void)</argsstring>
-        <name>getMaxSNR</name>
-        <qualifiedname>EmpCylSL::getMaxSNR</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Maximum SNR coefficient value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="618" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="618" bodyend="618"/>
-        <references refid="class_emp_cyl_s_l_1a62306d9b0778b965f9934adccdcd4bb7" compoundref="_emp_cyl_s_l_8_h" startline="71">maxSNR</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1aaa2e4007e2a54759b910932321cdcc27" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::getMinSNR</definition>
-        <argsstring>(void)</argsstring>
-        <name>getMinSNR</name>
-        <qualifiedname>EmpCylSL::getMinSNR</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Minimum SNR coefficient value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="615" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="615" bodyend="615"/>
-        <references refid="class_emp_cyl_s_l_1ae664cf3f67ea55849aabfc0bc24b454c" compoundref="_emp_cyl_s_l_8_h" startline="71">minSNR</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a1090e03956ae9472f3e706155b236a91" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::init_pca</definition>
-        <argsstring>()</argsstring>
-        <name>init_pca</name>
-        <qualifiedname>EmpCylSL::init_pca</qualifiedname>
-        <briefdescription>
-<para>Initialize PCA work space. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="630" column="8"/>
-        <referencedby refid="class_emp_cyl_s_l_1a7f48386e3f921bde7ec151270ec78650" compoundref="_emp_cyl_s_l_8_h" startline="772" endline="804">setHall</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a6401232ca5ea7a376c5b303e9eb56a00" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::make_coefficients</definition>
-        <argsstring>(bool compute=false)</argsstring>
-        <name>make_coefficients</name>
-        <qualifiedname>EmpCylSL::make_coefficients</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>compute</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Make coefficients from accumulated data. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>All levels </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="603" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a69b730b34f2ced6288bb2d05a815b626" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::make_coefficients</definition>
-        <argsstring>(unsigned mlevel, bool compute=false)</argsstring>
-        <name>make_coefficients</name>
-        <qualifiedname>EmpCylSL::make_coefficients</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>mlevel</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>compute</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Single level. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="606" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1aa6fc95bb8a5ab07336365777c4c86f2b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::make_eof</definition>
-        <argsstring>(void)</argsstring>
-        <name>make_eof</name>
-        <qualifiedname>EmpCylSL::make_eof</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Make empirical orthgonal functions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="609" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a657091ee7e0834ad0eda16a278272f0f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::pca_hall</definition>
-        <argsstring>(bool compute, bool subsamp)</argsstring>
-        <name>pca_hall</name>
-        <qualifiedname>EmpCylSL::pca_hall</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>compute</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>subsamp</declname>
-        </param>
-        <briefdescription>
-<para>Compute PCA. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="612" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a508f0810f70a5c66750bde83503591ad" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>int</type>
-        <definition>int EmpCylSL::read_cache</definition>
-        <argsstring>(void)</argsstring>
-        <name>read_cache</name>
-        <qualifiedname>EmpCylSL::read_cache</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Read basis from cache file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="525" column="7"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a2df1c13c177b4650056eac8c14e348e6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>int</type>
-        <definition>int EmpCylSL::read_eof_file</definition>
-        <argsstring>(const std::string &amp;eof_file)</argsstring>
-        <name>read_eof_file</name>
-        <qualifiedname>EmpCylSL::read_eof_file</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>eof_file</declname>
-        </param>
-        <briefdescription>
-<para>Read EOF basis from saved file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="519" column="7"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a8e24889349da789a18bc4e97534ce3dd" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>int</type>
-        <definition>int EmpCylSL::read_eof_header</definition>
-        <argsstring>(const std::string &amp;eof_file)</argsstring>
-        <name>read_eof_header</name>
-        <qualifiedname>EmpCylSL::read_eof_header</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>eof_file</declname>
-        </param>
-        <briefdescription>
-<para>Read EOF basis header from saved file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="516" column="7"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a1d5d673b23425cb29f6427b30dc804e9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::reset</definition>
-        <argsstring>(int numr, int lmax, int mmax, int nord, double ascale, double hscale, int Nodd, std::string cachename)</argsstring>
-        <name>reset</name>
-        <qualifiedname>EmpCylSL::reset</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nord</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ascale</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>hscale</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>Nodd</declname>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>cachename</declname>
-        </param>
-        <briefdescription>
-<para>Reconstruct basis with new parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="511" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1af25d5815c173d7cb6337488775802db2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::reset_mass</definition>
-        <argsstring>(void)</argsstring>
-        <name>reset_mass</name>
-        <qualifiedname>EmpCylSL::reset_mass</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Clear mass counter. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="597" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a6bf83f8f0c4c7e94dc46b2d86ae48295" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::restrict_order</definition>
-        <argsstring>(int n)</argsstring>
-        <name>restrict_order</name>
-        <qualifiedname>EmpCylSL::restrict_order</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Restrict order. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="734" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1acc5d0898ab7cea4df7f5dddeea9adcba" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::set_coefs</definition>
-        <argsstring>(int mm, const Eigen::VectorXd &amp;cos1, const Eigen::VectorXd &amp;sin1, bool zero=true)</argsstring>
-        <name>set_coefs</name>
-        <qualifiedname>EmpCylSL::set_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mm</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>cos1</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>sin1</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>zero</declname>
-          <defval>true</defval>
-        </param>
-        <briefdescription>
-<para>Set coefficients from Vectors. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Extrapolate and sum coefficents per multistep level to get a complete set of coefficients for force evaluation at an intermediate time step </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="677" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a3ccfb9016b0b7b7d508d77cf9d0ef25e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::set_coefs</definition>
-        <argsstring>(int mm, const std::vector&lt; double &gt; &amp;cos1, const std::vector&lt; double &gt; &amp;sin1, bool zero=true)</argsstring>
-        <name>set_coefs</name>
-        <qualifiedname>EmpCylSL::set_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mm</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; double &gt; &amp;</type>
-          <declname>cos1</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; double &gt; &amp;</type>
-          <declname>sin1</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>zero</declname>
-          <defval>true</defval>
-        </param>
-        <briefdescription>
-<para>Set coefficients from std::vectors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="681" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a4781146b6d532a885eac87681b5ba419" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::set_mass</definition>
-        <argsstring>(double mass)</argsstring>
-        <name>set_mass</name>
-        <qualifiedname>EmpCylSL::set_mass</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <briefdescription>
-<para>Set cylmass manually. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="694" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="694" bodyend="697"/>
-        <references refid="class_emp_cyl_s_l_1ac5b718c98b51ee729a87c4e4d3add432" compoundref="_emp_cyl_s_l_8_h" startline="70">cylmass</references>
-        <references refid="class_emp_cyl_s_l_1a65e2efdbf4893d31dfc6e466739133c7" compoundref="_emp_cyl_s_l_8_h" startline="69">cylmass_made</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a55b3fe32f3c3eea485767941d0110107" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::set_mlim</definition>
-        <argsstring>(int mlim)</argsstring>
-        <name>set_mlim</name>
-        <qualifiedname>EmpCylSL::set_mlim</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mlim</declname>
-        </param>
-        <briefdescription>
-<para>Set limit to mmax for testing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="540" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="540" bodyend="540"/>
-        <references refid="class_emp_cyl_s_l_1a450128216652014ea18eb6c325f04945" compoundref="_emp_cyl_s_l_8_h" startline="57">MLIM</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1ad025f491b47c2f289833180d974fad00" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::set_mmin</definition>
-        <argsstring>(int mmin)</argsstring>
-        <name>set_mmin</name>
-        <qualifiedname>EmpCylSL::set_mmin</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mmin</declname>
-        </param>
-        <briefdescription>
-<para>Set limit to mmax for testing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_emp_cyl_s_l_1aff9c53fa3175a325355c0f6826dc18ec" compoundref="_emp_cyl_s_l_8_h" startline="57">MMIN</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a67fbb41e7028467a5f39042d0a9d0874" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::set_mrange</definition>
-        <argsstring>(int mmin, int mmax)</argsstring>
-        <name>set_mrange</name>
-        <qualifiedname>EmpCylSL::set_mrange</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mmin</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mmax</declname>
-        </param>
-        <briefdescription>
-<para>Set azimuthal order range for evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="534" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="534" bodyend="534"/>
-        <references refid="class_emp_cyl_s_l_1a450128216652014ea18eb6c325f04945" compoundref="_emp_cyl_s_l_8_h" startline="57">MLIM</references>
-        <references refid="class_emp_cyl_s_l_1aff9c53fa3175a325355c0f6826dc18ec" compoundref="_emp_cyl_s_l_8_h" startline="57">MMIN</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1adcff853a8bc392ce63ec4f2ba5f13cfd" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::set_nrange</definition>
-        <argsstring>(int nmin, int nmax)</argsstring>
-        <name>set_nrange</name>
-        <qualifiedname>EmpCylSL::set_nrange</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>nmin</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <briefdescription>
-<para>Set radial order range for evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="531" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="531" bodyend="531"/>
-        <references refid="class_emp_cyl_s_l_1aaef776ee74e1bf29c608b6e635111049" compoundref="_emp_cyl_s_l_8_h" startline="58">NLIM</references>
-        <references refid="class_emp_cyl_s_l_1a6ec0b65d4efab53a29c62d0afb8fb91d" compoundref="_emp_cyl_s_l_8_h" startline="58">NMIN</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1af49dd0104d532aabb4f6a3524dabdb40" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::setSampT</definition>
-        <argsstring>(int N)</argsstring>
-        <name>setSampT</name>
-        <qualifiedname>EmpCylSL::setSampT</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>For PCAVAR: set subsample size. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="588" column="8" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="588" bodyend="588"/>
-        <references refid="class_emp_cyl_s_l_1a0372fb0957caf5a86e74d4f594bff96f" compoundref="_emp_cyl_s_l_8_h" startline="200">defSampT</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a2e5a9690880a05b37e253a3802a394b6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::setup_accumulation</definition>
-        <argsstring>(int toplev=0)</argsstring>
-        <name>setup_accumulation</name>
-        <qualifiedname>EmpCylSL::setup_accumulation</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>toplev</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-<para>Setup for accumulated coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="585" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a746e4c31c3497ecafd96f556e2bf9447" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::setup_eof</definition>
-        <argsstring>(void)</argsstring>
-        <name>setup_eof</name>
-        <qualifiedname>EmpCylSL::setup_eof</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>For EOF computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="594" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a19d1760036463f6711b552a88cee6b86" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::setup_table</definition>
-        <argsstring>(void)</argsstring>
-        <name>setup_table</name>
-        <qualifiedname>EmpCylSL::setup_table</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>For EOF. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="591" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a40102949b815daef674f1ca432e4940b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::y_to_z</definition>
-        <argsstring>(double y)</argsstring>
-        <name>y_to_z</name>
-        <qualifiedname>EmpCylSL::y_to_z</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <briefdescription>
-<para>Compute Z from non-dbimensional vertical coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="555" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1a4564a78e83de79884e1c1c886a345a4c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double EmpCylSL::z_to_y</definition>
-        <argsstring>(double z)</argsstring>
-        <name>z_to_y</name>
-        <qualifiedname>EmpCylSL::z_to_y</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Compute non-dimensional vertical coordinate from Z. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="552" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1af310cb890568c5493a88e3a06db16d5d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>EmpCylSL::~EmpCylSL</definition>
-        <argsstring>(void)</argsstring>
-        <name>~EmpCylSL</name>
-        <qualifiedname>EmpCylSL::~EmpCylSL</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="508" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Encapsulatates a <ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref> (Sturm-Liouville basis) for use as force method</para>
-<para>This version breaks the spherical basis computation into even and odd subspaces if Nodd is selected. This gives the user more control over the vertical parity, is numerically more accurate, and more efficient. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>CylEXP</label>
-        <link refid="class_cyl_e_x_p"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>EmpCylSL</label>
-        <link refid="class_emp_cyl_s_l"/>
-      </node>
-    </inheritancegraph>
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-      <node id="2">
-        <label>CylCoefHeader</label>
-        <link refid="struct_cyl_coef_header"/>
-      </node>
-      <node id="1">
-        <label>EmpCylSL</label>
-        <link refid="class_emp_cyl_s_l"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>coefheadercyl</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>cosL</edgelabel>
-          <edgelabel>cosN</edgelabel>
-          <edgelabel>sinL</edgelabel>
-          <edgelabel>sinN</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>covV</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>covM</edgelabel>
-        </childnode>
-        <childnode refid="9" relation="usage">
-          <edgelabel>densRg</edgelabel>
-          <edgelabel>massRg</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EmpCylSL::CoefMatrix</label>
-        <link refid="struct_emp_cyl_s_l_1_1_coef_matrix"/>
-        <childnode refid="8" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>EmpCylSL::CoefVector</label>
-        <link refid="struct_emp_cyl_s_l_1_1_coef_vector"/>
-        <childnode refid="6" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>EmpCylSL::MstepArray</label>
-        <link refid="struct_emp_cyl_s_l_1_1_mstep_array"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>Interp1d</label>
-        <link refid="class_interp1d"/>
-      </node>
-      <node id="9">
-        <label>Linear1d</label>
-        <link refid="class_linear1d"/>
-        <childnode refid="10" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>std::vector&lt; VectorD2ptr &gt;</label>
-      </node>
-      <node id="8">
-        <label>std::vector&lt; std::vector&lt; MatrixM &gt; &gt;</label>
-      </node>
-      <node id="6">
-        <label>std::vector&lt; std::vector&lt; VectorM &gt; &gt;</label>
-      </node>
-    </collaborationgraph>
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-      <member refid="class_emp_cyl_s_l_1af20a77b1f4fd2c8e813d98711460e695" prot="protected" virt="non-virtual"><scope>EmpCylSL</scope><name>coefs_made</name></member>
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-      <member refid="class_emp_cyl_s_l_1a57d043d255d6b3a9a30c2be6bbbcb329" prot="protected" virt="non-virtual"><scope>EmpCylSL</scope><name>compute_even_odd</name></member>
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-      <member refid="class_emp_cyl_s_l_1ae05a132072a42c08fdfbac5cdd4117b0" prot="protected" virt="non-virtual"><scope>EmpCylSL</scope><name>densS</name></member>
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-      <member refid="class_emp_cyl_s_l_1aa7c0b484a9d7085e0335beb11ee1c76a" prot="protected" virt="non-virtual"><scope>EmpCylSL</scope><name>zforceC</name></member>
-      <member refid="class_emp_cyl_s_l_1a7a1ac165e19334b4603046105628e1eb" prot="protected" virt="non-virtual"><scope>EmpCylSL</scope><name>zforceS</name></member>
-      <member refid="class_emp_cyl_s_l_1af310cb890568c5493a88e3a06db16d5d" prot="public" virt="non-virtual"><scope>EmpCylSL</scope><name>~EmpCylSL</name></member>
-    </listofallmembers>
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-</doxygen>
diff --git a/doxyxml/class_emp_cyl_s_l_1_1_axi_disk.xml b/doxyxml/class_emp_cyl_s_l_1_1_axi_disk.xml
deleted file mode 100644
index b0ab722..0000000
--- a/doxyxml/class_emp_cyl_s_l_1_1_axi_disk.xml
+++ /dev/null
@@ -1,256 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_emp_cyl_s_l_1_1_axi_disk" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>EmpCylSL::AxiDisk</compoundname>
-    <derivedcompoundref refid="class_double_exponential" prot="public" virt="non-virtual">DoubleExponential</derivedcompoundref>
-    <derivedcompoundref refid="class_exponential" prot="public" virt="non-virtual">Exponential</derivedcompoundref>
-    <derivedcompoundref refid="class_f_e_e_d" prot="public" virt="non-virtual">FEED</derivedcompoundref>
-    <derivedcompoundref refid="class_ferrers" prot="public" virt="non-virtual">Ferrers</derivedcompoundref>
-    <derivedcompoundref refid="class_m_ndisk" prot="public" virt="non-virtual">MNdisk</derivedcompoundref>
-    <derivedcompoundref refid="class_py_model" prot="public" virt="non-virtual">PyModel</derivedcompoundref>
-    <derivedcompoundref refid="class_truncated" prot="public" virt="non-virtual">Truncated</derivedcompoundref>
-    <derivedcompoundref refid="classdiskbulge" prot="public" virt="non-virtual">diskbulge</derivedcompoundref>
-    <includes refid="_emp_cyl_s_l_8_h" local="no">EmpCylSL.H</includes>
-    <sectiondef kind="protected-attrib">
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-        <type>std::string</type>
-        <definition>std::string EmpCylSL::AxiDisk::ID</definition>
-        <argsstring></argsstring>
-        <name>ID</name>
-        <qualifiedname>EmpCylSL::AxiDisk::ID</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="366" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="366" bodyend="-1"/>
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-        <referencedby refid="class_truncated_1af66d8a73dd37e3a7b951c484146f12f0" compoundref="_disk_models_8_h" startline="211" endline="217">Truncated::Truncated</referencedby>
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-        <type>double</type>
-        <definition>double EmpCylSL::AxiDisk::M</definition>
-        <argsstring></argsstring>
-        <name>M</name>
-        <qualifiedname>EmpCylSL::AxiDisk::M</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <referencedby refid="class_exponential_1a9d5b044bf0435207b4cde747a62663de" compoundref="_disk_models_8_h" startline="134" endline="138">Exponential::operator()</referencedby>
-        <referencedby refid="class_double_exponential_1af349fa39100fae66fe0a70f8df8f1ce8" compoundref="_disk_models_8_h" startline="160" endline="169">DoubleExponential::operator()</referencedby>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; EmpCylSL::AxiDisk::params</definition>
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-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="367" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="367" bodyend="-1"/>
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-        <argsstring>(double M=1, std::string id=&quot;AxiDisk&quot;)</argsstring>
-        <name>AxiDisk</name>
-        <qualifiedname>EmpCylSL::AxiDisk::AxiDisk</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>M</declname>
-          <defval>1</defval>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>id</declname>
-          <defval>&quot;AxiDisk&quot;</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="373" column="5" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="373" bodyend="373"/>
-      </memberdef>
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-        <type>std::string</type>
-        <definition>std::string EmpCylSL::AxiDisk::getID</definition>
-        <argsstring>()</argsstring>
-        <name>getID</name>
-        <qualifiedname>EmpCylSL::AxiDisk::getID</qualifiedname>
-        <briefdescription>
-<para>Get ID. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="379" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="379" bodyend="379"/>
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-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1_1_axi_disk_1af9114d56b03e52a9a939b091d44f191f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int EmpCylSL::AxiDisk::getMass</definition>
-        <argsstring>()</argsstring>
-        <name>getMass</name>
-        <qualifiedname>EmpCylSL::AxiDisk::getMass</qualifiedname>
-        <briefdescription>
-<para>Get Mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="382" column="9" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="382" bodyend="382"/>
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-      </memberdef>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt; double &gt; EmpCylSL::AxiDisk::getParams</definition>
-        <argsstring>()</argsstring>
-        <name>getParams</name>
-        <qualifiedname>EmpCylSL::AxiDisk::getParams</qualifiedname>
-        <briefdescription>
-<para>Get parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="385" column="17" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="385" bodyend="385"/>
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-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1_1_axi_disk_1a1ed84b13e59c6571fd49aeb90c452675" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double EmpCylSL::AxiDisk::operator()</definition>
-        <argsstring>(double R, double z, double phi=0.)=0</argsstring>
-        <name>operator()</name>
-        <qualifiedname>EmpCylSL::AxiDisk::operator()</qualifiedname>
-        <reimplementedby refid="class_f_e_e_d_1a4cdb62eae2ff9a16050f089835666e99">operator()</reimplementedby>
-        <reimplementedby refid="class_ferrers_1a5fd4901f5cf39ea89b0b1dead97d998f">operator()</reimplementedby>
-        <reimplementedby refid="class_exponential_1a9d5b044bf0435207b4cde747a62663de">operator()</reimplementedby>
-        <reimplementedby refid="class_double_exponential_1af349fa39100fae66fe0a70f8df8f1ce8">operator()</reimplementedby>
-        <reimplementedby refid="class_m_ndisk_1ae3af9cb061a40b31dec7486ca24c3fbe">operator()</reimplementedby>
-        <reimplementedby refid="class_truncated_1aaf3541affbceec441a258be79354963b">operator()</reimplementedby>
-        <reimplementedby refid="classdiskbulge_1afbaa683e3b914246ebf78aa03cfc9fdc">operator()</reimplementedby>
-        <reimplementedby refid="class_py_model_1a565a4d630b7c6bab5f5c2e1de9b46959">operator()</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-          <defval>0.</defval>
-        </param>
-        <briefdescription>
-<para>Density function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="376" column="20"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Axisymmetric disk density function for deprojection. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>DoubleExponential</label>
-        <link refid="class_double_exponential"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>EmpCylSL::AxiDisk</label>
-        <link refid="class_emp_cyl_s_l_1_1_axi_disk"/>
-      </node>
-      <node id="3">
-        <label>Exponential</label>
-        <link refid="class_exponential"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>FEED</label>
-        <link refid="class_f_e_e_d"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Ferrers</label>
-        <link refid="class_ferrers"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>MNdisk</label>
-        <link refid="class_m_ndisk"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>PyModel</label>
-        <link refid="class_py_model"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Truncated</label>
-        <link refid="class_truncated"/>
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-        </childnode>
-      </node>
-      <node id="9">
-        <label>diskbulge</label>
-        <link refid="classdiskbulge"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
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-    <listofallmembers>
-      <member refid="class_emp_cyl_s_l_1_1_axi_disk_1a47284137e24ca113e6250992a26d5920" prot="public" virt="non-virtual"><scope>EmpCylSL::AxiDisk</scope><name>AxiDisk</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_axi_disk_1ab1aa18251d8ad3196952f490dde2b6cb" prot="public" virt="non-virtual"><scope>EmpCylSL::AxiDisk</scope><name>getID</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_axi_disk_1af9114d56b03e52a9a939b091d44f191f" prot="public" virt="non-virtual"><scope>EmpCylSL::AxiDisk</scope><name>getMass</name></member>
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-      <member refid="class_emp_cyl_s_l_1_1_axi_disk_1ad8a0011315ce0798c2426813c29cf2ed" prot="protected" virt="non-virtual"><scope>EmpCylSL::AxiDisk</scope><name>M</name></member>
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-</doxygen>
diff --git a/doxyxml/class_emp_cyl_s_l_1_1_p_c_abasis.xml b/doxyxml/class_emp_cyl_s_l_1_1_p_c_abasis.xml
deleted file mode 100644
index 540f362..0000000
--- a/doxyxml/class_emp_cyl_s_l_1_1_p_c_abasis.xml
+++ /dev/null
@@ -1,122 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_emp_cyl_s_l_1_1_p_c_abasis" kind="class" language="C++" prot="protected">
-    <compoundname>EmpCylSL::PCAbasis</compoundname>
-    <basecompoundref prot="public" virt="non-virtual">std::map&lt; int, PCAelemPtr &gt;</basecompoundref>
-    <includes refid="_emp_cyl_s_l_8_h" local="no">EmpCylSL.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1_1_p_c_abasis_1ac59645ee46d91f0d558e744c7ed5887c" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double EmpCylSL::PCAbasis::Tmass</definition>
-        <argsstring></argsstring>
-        <name>Tmass</name>
-        <qualifiedname>EmpCylSL::PCAbasis::Tmass</qualifiedname>
-        <briefdescription>
-<para>Mass in the accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="296" column="12" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="296" bodyend="-1"/>
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-        <type>unsigned</type>
-        <definition>unsigned EmpCylSL::PCAbasis::Tnumb</definition>
-        <argsstring></argsstring>
-        <name>Tnumb</name>
-        <qualifiedname>EmpCylSL::PCAbasis::Tnumb</qualifiedname>
-        <briefdescription>
-<para>Total number in accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      </memberdef>
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-        <type></type>
-        <definition>EmpCylSL::PCAbasis::PCAbasis</definition>
-        <argsstring>(int M, int n)</argsstring>
-        <name>PCAbasis</name>
-        <qualifiedname>EmpCylSL::PCAbasis::PCAbasis</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="299" column="5" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="299" bodyend="305"/>
-        <references refid="class_emp_cyl_s_l_1a7c0ba4293a82547d2551f2b8e84c0261" compoundref="_emp_cyl_s_l_8_h" startline="67">EmpCylSL::M</references>
-        <references refid="class_emp_cyl_s_l_1a902557b515ca710ca7e6d685135f1201" compoundref="_emp_cyl_s_l_8_h" startline="73">EmpCylSL::m</references>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_abasis_1adff7be2bcaa158f1a2beb547548e73ab" compoundref="_emp_cyl_s_l_8_h" startline="308" endline="313">reset</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1_1_p_c_abasis_1adff7be2bcaa158f1a2beb547548e73ab" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::PCAbasis::reset</definition>
-        <argsstring>()</argsstring>
-        <name>reset</name>
-        <qualifiedname>EmpCylSL::PCAbasis::reset</qualifiedname>
-        <briefdescription>
-<para>Reset all variables to zero for accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="308" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="308" bodyend="313"/>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ac59645ee46d91f0d558e744c7ed5887c" compoundref="_emp_cyl_s_l_8_h" startline="296">Tmass</references>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_abasis_1a80a2f0dd3a862da4ce77282a49805d5c" compoundref="_emp_cyl_s_l_8_h" startline="293">Tnumb</references>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ae9fb4a89a2cacf4563c3c7227637807f" compoundref="_emp_cyl_s_l_8_h" startline="299" endline="305">PCAbasis</referencedby>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>PCA basis structure for caching and diagnostics. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>EmpCylSL::PCAbasis</label>
-        <link refid="class_emp_cyl_s_l_1_1_p_c_abasis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>std::map&lt; int, PCAelemPtr &gt;</label>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>EmpCylSL::PCAbasis</label>
-        <link refid="class_emp_cyl_s_l_1_1_p_c_abasis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>std::map&lt; int, PCAelemPtr &gt;</label>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="288" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="289" bodyend="315"/>
-    <listofallmembers>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ae9fb4a89a2cacf4563c3c7227637807f" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAbasis</scope><name>PCAbasis</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_abasis_1adff7be2bcaa158f1a2beb547548e73ab" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAbasis</scope><name>reset</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_abasis_1ac59645ee46d91f0d558e744c7ed5887c" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAbasis</scope><name>Tmass</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_abasis_1a80a2f0dd3a862da4ce77282a49805d5c" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAbasis</scope><name>Tnumb</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_emp_cyl_s_l_1_1_p_c_aelement.xml b/doxyxml/class_emp_cyl_s_l_1_1_p_c_aelement.xml
deleted file mode 100644
index fe2e0df..0000000
--- a/doxyxml/class_emp_cyl_s_l_1_1_p_c_aelement.xml
+++ /dev/null
@@ -1,147 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_emp_cyl_s_l_1_1_p_c_aelement" kind="class" language="C++" prot="protected">
-    <compoundname>EmpCylSL::PCAelement</compoundname>
-    <includes refid="_emp_cyl_s_l_8_h" local="no">EmpCylSL.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1_1_p_c_aelement_1abcab06d18640eb40245ef98d345292bb" prot="public" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd EmpCylSL::PCAelement::covrJK</definition>
-        <argsstring></argsstring>
-        <name>covrJK</name>
-        <qualifiedname>EmpCylSL::PCAelement::covrJK</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="263" column="21" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="263" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a016d57a06df812a74b05cfe46885d717" compoundref="_emp_cyl_s_l_8_h" startline="268" endline="273">PCAelement</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_aelement_1addd52a31aeea197f2b903d8346f74335" compoundref="_emp_cyl_s_l_8_h" startline="276" endline="281">reset</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1_1_p_c_aelement_1a09bec389e30520fc0c10ba746d5c187a" prot="public" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd EmpCylSL::PCAelement::evalJK</definition>
-        <argsstring></argsstring>
-        <name>evalJK</name>
-        <qualifiedname>EmpCylSL::PCAelement::evalJK</qualifiedname>
-        <briefdescription>
-<para>All the public data. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="260" column="21" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="260" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1_1_p_c_aelement_1a9b4260adb897ddeea93022b7c03ef6a9" prot="public" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd EmpCylSL::PCAelement::evecJK</definition>
-        <argsstring></argsstring>
-        <name>evecJK</name>
-        <qualifiedname>EmpCylSL::PCAelement::evecJK</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="264" column="21" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="264" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a016d57a06df812a74b05cfe46885d717" compoundref="_emp_cyl_s_l_8_h" startline="268" endline="273">PCAelement</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_aelement_1addd52a31aeea197f2b903d8346f74335" compoundref="_emp_cyl_s_l_8_h" startline="276" endline="281">reset</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1_1_p_c_aelement_1a42880da355677243fbb6e3ce89d6d3b8" prot="public" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd EmpCylSL::PCAelement::meanJK</definition>
-        <argsstring></argsstring>
-        <name>meanJK</name>
-        <qualifiedname>EmpCylSL::PCAelement::meanJK</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="261" column="21" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="261" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a016d57a06df812a74b05cfe46885d717" compoundref="_emp_cyl_s_l_8_h" startline="268" endline="273">PCAelement</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_aelement_1addd52a31aeea197f2b903d8346f74335" compoundref="_emp_cyl_s_l_8_h" startline="276" endline="281">reset</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_emp_cyl_s_l_1_1_p_c_aelement_1a160363390a8120d65bccce6eb9482697" prot="public" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd EmpCylSL::PCAelement::ratio</definition>
-        <argsstring></argsstring>
-        <name>ratio</name>
-        <qualifiedname>EmpCylSL::PCAelement::ratio</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="262" column="21" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="262" bodyend="-1"/>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a016d57a06df812a74b05cfe46885d717" compoundref="_emp_cyl_s_l_8_h" startline="268" endline="273">PCAelement</referencedby>
-        <referencedby refid="class_emp_cyl_s_l_1_1_p_c_aelement_1addd52a31aeea197f2b903d8346f74335" compoundref="_emp_cyl_s_l_8_h" startline="276" endline="281">reset</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_emp_cyl_s_l_1_1_p_c_aelement_1a016d57a06df812a74b05cfe46885d717" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>EmpCylSL::PCAelement::PCAelement</definition>
-        <argsstring>(int n)</argsstring>
-        <name>PCAelement</name>
-        <qualifiedname>EmpCylSL::PCAelement::PCAelement</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="268" column="5" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="268" bodyend="273"/>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_aelement_1abcab06d18640eb40245ef98d345292bb" compoundref="_emp_cyl_s_l_8_h" startline="263">covrJK</references>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a9b4260adb897ddeea93022b7c03ef6a9" compoundref="_emp_cyl_s_l_8_h" startline="264">evecJK</references>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a42880da355677243fbb6e3ce89d6d3b8" compoundref="_emp_cyl_s_l_8_h" startline="261">meanJK</references>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a160363390a8120d65bccce6eb9482697" compoundref="_emp_cyl_s_l_8_h" startline="262">ratio</references>
-      </memberdef>
-      <memberdef kind="function" id="class_emp_cyl_s_l_1_1_p_c_aelement_1addd52a31aeea197f2b903d8346f74335" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void EmpCylSL::PCAelement::reset</definition>
-        <argsstring>()</argsstring>
-        <name>reset</name>
-        <qualifiedname>EmpCylSL::PCAelement::reset</qualifiedname>
-        <briefdescription>
-<para>Zero all data. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="276" column="10" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="276" bodyend="281"/>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_aelement_1abcab06d18640eb40245ef98d345292bb" compoundref="_emp_cyl_s_l_8_h" startline="263">covrJK</references>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a9b4260adb897ddeea93022b7c03ef6a9" compoundref="_emp_cyl_s_l_8_h" startline="264">evecJK</references>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a42880da355677243fbb6e3ce89d6d3b8" compoundref="_emp_cyl_s_l_8_h" startline="261">meanJK</references>
-        <references refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a160363390a8120d65bccce6eb9482697" compoundref="_emp_cyl_s_l_8_h" startline="262">ratio</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Data for each harmonic subspace. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/EmpCylSL.H" line="255" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EmpCylSL.H" bodystart="256" bodyend="283"/>
-    <listofallmembers>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_aelement_1abcab06d18640eb40245ef98d345292bb" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAelement</scope><name>covrJK</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a09bec389e30520fc0c10ba746d5c187a" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAelement</scope><name>evalJK</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a9b4260adb897ddeea93022b7c03ef6a9" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAelement</scope><name>evecJK</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a42880da355677243fbb6e3ce89d6d3b8" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAelement</scope><name>meanJK</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a016d57a06df812a74b05cfe46885d717" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAelement</scope><name>PCAelement</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_aelement_1a160363390a8120d65bccce6eb9482697" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAelement</scope><name>ratio</name></member>
-      <member refid="class_emp_cyl_s_l_1_1_p_c_aelement_1addd52a31aeea197f2b903d8346f74335" prot="public" virt="non-virtual"><scope>EmpCylSL::PCAelement</scope><name>reset</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_ensemble.xml b/doxyxml/class_ensemble.xml
deleted file mode 100644
index e984cbb..0000000
--- a/doxyxml/class_ensemble.xml
+++ /dev/null
@@ -1,778 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_ensemble" kind="class" language="C++" prot="public">
-    <compoundname>Ensemble</compoundname>
-    <includes refid="phase_8_h" local="no">phase.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_ensemble_1ab2cff107122af54c3bf077e24a5ac439" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Ensemble::Nstars</definition>
-        <argsstring></argsstring>
-        <name>Nstars</name>
-        <qualifiedname>Ensemble::Nstars</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="169" column="7" bodyfile="/home/weinberg/Projects/EXP/include/phase.H" bodystart="169" bodyend="-1"/>
-        <referencedby refid="class_ensemble_1a7b35b9e0c486a19438c17a186ea5be76" compoundref="phase_8_h" startline="180" endline="180">get_Nstars</referencedby>
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-      <memberdef kind="variable" id="class_ensemble_1a054a3885c940a85bf84b4882b912f6bf" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="class_phase" kindref="compound">Phase</ref> &gt;</type>
-        <definition>std::vector&lt;Phase&gt; Ensemble::stars</definition>
-        <argsstring></argsstring>
-        <name>stars</name>
-        <qualifiedname>Ensemble::stars</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="170" column="15" bodyfile="/home/weinberg/Projects/EXP/include/phase.H" bodystart="170" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ensemble_1afdf4c0b679bcecb8c8894011d7a24965" prot="protected" static="no" mutable="no">
-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>t</name>
-        <qualifiedname>Ensemble::t</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="171" column="10" bodyfile="/home/weinberg/Projects/EXP/include/phase.H" bodystart="171" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void Ensemble::binread</definition>
-        <argsstring>(std::istream &amp;fp)</argsstring>
-        <name>binread</name>
-        <qualifiedname>Ensemble::binread</qualifiedname>
-        <param>
-          <type>std::istream &amp;</type>
-          <declname>fp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="221" column="8"/>
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-        <type>void</type>
-        <definition>void Ensemble::binwrite</definition>
-        <argsstring>(std::ostream &amp;fp)</argsstring>
-        <name>binwrite</name>
-        <qualifiedname>Ensemble::binwrite</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>fp</declname>
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-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="222" column="8"/>
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-      <memberdef kind="function" id="class_ensemble_1afe721b57b1a0546fe0a9a0346270e84e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Ensemble::CM_Position</definition>
-        <argsstring>(void)</argsstring>
-        <name>CM_Position</name>
-        <qualifiedname>Ensemble::CM_Position</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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diff --git a/doxyxml/class_enum_bitset.xml b/doxyxml/class_enum_bitset.xml
deleted file mode 100644
index e14cac7..0000000
--- a/doxyxml/class_enum_bitset.xml
+++ /dev/null
@@ -1,261 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_enum_bitset" kind="class" language="C++" prot="public">
-    <compoundname>EnumBitset</compoundname>
-    <includes refid="_enum_bitset_8_h" local="no">EnumBitset.H</includes>
-    <templateparamlist>
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-        <type>typename T</type>
-      </param>
-    </templateparamlist>
-    <sectiondef kind="private-attrib">
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-        <definition>std::bitset&lt;static_cast&lt;typename std::underlying_type&lt;T&gt;::type&gt;(EnumTraits&lt;T&gt;::max)&gt; EnumBitset&lt; T &gt;::s</definition>
-        <argsstring></argsstring>
-        <name>s</name>
-        <qualifiedname>EnumBitset::s</qualifiedname>
-        <briefdescription>
-<para>The underlying bitset. </para>
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-        <detaileddescription>
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-          <declname>i</declname>
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-        <briefdescription>
-<para>operator version of the test </para>
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-<para>operator version of the test </para>
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-        <type><ref refid="class_enum_bitset" kindref="compound">EnumBitset</ref> &amp;</type>
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-        <type>size_t</type>
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-<para>Return size of bitset. </para>
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diff --git a/doxyxml/class_exponential.xml b/doxyxml/class_exponential.xml
deleted file mode 100644
index bec9b1d..0000000
--- a/doxyxml/class_exponential.xml
+++ /dev/null
@@ -1,149 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_exponential" kind="class" language="C++" prot="public">
-    <compoundname>Exponential</compoundname>
-    <basecompoundref refid="class_emp_cyl_s_l_1_1_axi_disk" prot="public" virt="non-virtual">EmpCylSL::AxiDisk</basecompoundref>
-    <includes refid="_disk_models_8_h" local="no">DiskModels.H</includes>
-    <sectiondef kind="private-attrib">
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-        <name>a</name>
-        <qualifiedname>Exponential::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskModels.H" line="123" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskModels.H" bodystart="123" bodyend="-1"/>
-        <referencedby refid="class_exponential_1af4ced1db8ef741a0ad657bbbd86f847f" compoundref="_disk_models_8_h" startline="127" endline="132">Exponential</referencedby>
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-        <name>h</name>
-        <qualifiedname>Exponential::h</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
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-        <referencedby refid="class_exponential_1af4ced1db8ef741a0ad657bbbd86f847f" compoundref="_disk_models_8_h" startline="127" endline="132">Exponential</referencedby>
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-        <qualifiedname>Exponential::Exponential</qualifiedname>
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-          <declname>a</declname>
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-        <param>
-          <type>double</type>
-          <declname>h</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>M</declname>
-          <defval>1</defval>
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-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/DiskModels.H" line="127" column="3" bodyfile="/home/weinberg/Projects/EXP/include/DiskModels.H" bodystart="127" bodyend="132"/>
-        <references refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" compoundref="_disk_models_8_h" startline="123">a</references>
-        <references refid="class_exponential_1a8cd69185e12eb4c9d75ae0846160e8f1" compoundref="_disk_models_8_h" startline="123">h</references>
-        <references refid="class_emp_cyl_s_l_1_1_axi_disk_1ae117d1cc1fbe5e503b751accd64c3d1e" compoundref="_emp_cyl_s_l_8_h" startline="367">EmpCylSL::AxiDisk::params</references>
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-        <type>double</type>
-        <definition>double Exponential::operator()</definition>
-        <argsstring>(double R, double z, double phi=0.)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>Exponential::operator()</qualifiedname>
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-        <param>
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-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-          <defval>0.</defval>
-        </param>
-        <briefdescription>
-<para>Density function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskModels.H" line="134" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskModels.H" bodystart="134" bodyend="138"/>
-        <references refid="class_exponential_1a986cf451a17c9d8501b0f3441b751ab6" compoundref="_disk_models_8_h" startline="123">a</references>
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-<para>The usual exponential disk. </para>
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diff --git a/doxyxml/class_exponential_disk.xml b/doxyxml/class_exponential_disk.xml
deleted file mode 100644
index fed6824..0000000
--- a/doxyxml/class_exponential_disk.xml
+++ /dev/null
@@ -1,545 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-        <referencedby refid="class_exponential_disk_1a50278d030aef597c0ca802e5135a6a13" compoundref="exponential_8_h" startline="22" endline="33">ExponentialDisk</referencedby>
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-        <referencedby refid="class_exponential_disk_1aab1bb2d22f8c4b8d5c2fb20b51989373" compoundref="exponential_8_h" startline="38" endline="38">get_mass</referencedby>
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-        <definition>double ExponentialDisk::den0</definition>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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diff --git a/doxyxml/class_external_collection.xml b/doxyxml/class_external_collection.xml
deleted file mode 100644
index 14ec123..0000000
--- a/doxyxml/class_external_collection.xml
+++ /dev/null
@@ -1,205 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_external_collection" kind="class" language="C++" prot="public">
-    <compoundname>ExternalCollection</compoundname>
-    <includes refid="_external_collection_8_h" local="no">ExternalCollection.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_external_collection_1a44747f1e371fbee16200e5c68df1ca0a" prot="private" static="no" mutable="no">
-        <type>list&lt; void * &gt;</type>
-        <definition>list&lt;void *&gt; ExternalCollection::dl_list</definition>
-        <argsstring></argsstring>
-        <name>dl_list</name>
-        <qualifiedname>ExternalCollection::dl_list</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="31" column="8" bodyfile="/home/weinberg/Projects/EXP/src/ExternalCollection.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_external_collection_1ab9b907f1aef03d99e7d1c050b06171f2" prot="private" static="no" mutable="no">
-        <type>list&lt; void * &gt;::iterator</type>
-        <definition>list&lt;void*&gt;::iterator ExternalCollection::itr</definition>
-        <argsstring></argsstring>
-        <name>itr</name>
-        <qualifiedname>ExternalCollection::itr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="32" column="19" bodyfile="/home/weinberg/Projects/EXP/src/ExternalCollection.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_external_collection_1a8a04d8db32022e54f155c942d898afad" prot="private" static="no" mutable="no">
-        <type>list&lt; <ref refid="class_external_force" kindref="compound">ExternalForce</ref> * &gt;::iterator</type>
-        <definition>list&lt;ExternalForce*&gt;::iterator ExternalCollection::sitr</definition>
-        <argsstring></argsstring>
-        <name>sitr</name>
-        <qualifiedname>ExternalCollection::sitr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="29" column="19" bodyfile="/home/weinberg/Projects/EXP/src/ExternalCollection.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_external_collection_1a4362ce52270ce654d5d07d95f9906052" prot="public" static="no" mutable="no">
-        <type>list&lt; <ref refid="class_external_force" kindref="compound">ExternalForce</ref> * &gt;</type>
-        <definition>list&lt;ExternalForce *&gt; ExternalCollection::force_list</definition>
-        <argsstring></argsstring>
-        <name>force_list</name>
-        <qualifiedname>ExternalCollection::force_list</qualifiedname>
-        <briefdescription>
-<para>List of forces we create. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="39" column="8" bodyfile="/home/weinberg/Projects/EXP/src/ExternalCollection.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_external_collection_1ac4da3d9ae31d9eb614df86b1c3b2cbcb" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void ExternalCollection::dynamicload</definition>
-        <argsstring>(void)</argsstring>
-        <name>dynamicload</name>
-        <qualifiedname>ExternalCollection::dynamicload</qualifiedname>
-        <param>
-          <type>void</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="33" column="8"/>
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-        <type>vector&lt; string &gt;</type>
-        <definition>vector&lt; string &gt; ExternalCollection::getlibs</definition>
-        <argsstring>(void)</argsstring>
-        <name>getlibs</name>
-        <qualifiedname>ExternalCollection::getlibs</qualifiedname>
-        <param>
-          <type>void</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="34" column="10"/>
-      </memberdef>
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-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_external_collection_1abc545918963d04a00abb107479481baf" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>ExternalCollection::ExternalCollection</definition>
-        <argsstring>()</argsstring>
-        <name>ExternalCollection</name>
-        <qualifiedname>ExternalCollection::ExternalCollection</qualifiedname>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="42" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_collection_1a0001471cf1d374db9cb9c2ecc4436231" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void ExternalCollection::finish</definition>
-        <argsstring>()</argsstring>
-        <name>finish</name>
-        <qualifiedname>ExternalCollection::finish</qualifiedname>
-        <briefdescription>
-<para>Call the finish member for all external forces. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="54" column="8"/>
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-        <type>void</type>
-        <definition>void ExternalCollection::get_acceleration_and_potential</definition>
-        <argsstring>(vector&lt; Particle &gt; *)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>ExternalCollection::get_acceleration_and_potential</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; *</type>
-        </param>
-        <briefdescription>
-<para>Provides the same interface to compute acceleration as <ref refid="class_external_force" kindref="compound">ExternalForce</ref>. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="51" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_collection_1adf8e06496580d4c2725de7ab74b48df2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void ExternalCollection::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>ExternalCollection::initialize</qualifiedname>
-        <briefdescription>
-<para>Reads configuration database and initializes requested external forces. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="48" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_collection_1a56fa2783bad9ecb6f3efaf47659d2a69" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>ExternalCollection::~ExternalCollection</definition>
-        <argsstring>()</argsstring>
-        <name>~ExternalCollection</name>
-        <qualifiedname>ExternalCollection::~ExternalCollection</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="45" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Container class for external force types. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>These are supplied as a file with one type to a line. The constructor does &quot;hand coded&quot; reflection to make a chain of these. Therefore, the external forces will be applied in order of their listing (in case this matters). <linebreak/>
- Format: single line per force, parameters separated from name by &quot;:&quot; </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/ExternalCollection.H" line="25" column="1" bodyfile="/home/weinberg/Projects/EXP/src/ExternalCollection.H" bodystart="26" bodyend="55"/>
-    <listofallmembers>
-      <member refid="class_external_collection_1a44747f1e371fbee16200e5c68df1ca0a" prot="private" virt="non-virtual"><scope>ExternalCollection</scope><name>dl_list</name></member>
-      <member refid="class_external_collection_1ac4da3d9ae31d9eb614df86b1c3b2cbcb" prot="private" virt="non-virtual"><scope>ExternalCollection</scope><name>dynamicload</name></member>
-      <member refid="class_external_collection_1abc545918963d04a00abb107479481baf" prot="public" virt="non-virtual"><scope>ExternalCollection</scope><name>ExternalCollection</name></member>
-      <member refid="class_external_collection_1a0001471cf1d374db9cb9c2ecc4436231" prot="public" virt="non-virtual"><scope>ExternalCollection</scope><name>finish</name></member>
-      <member refid="class_external_collection_1a4362ce52270ce654d5d07d95f9906052" prot="public" virt="non-virtual"><scope>ExternalCollection</scope><name>force_list</name></member>
-      <member refid="class_external_collection_1abae82927d477e68456ec36a9c190384b" prot="public" virt="non-virtual"><scope>ExternalCollection</scope><name>get_acceleration_and_potential</name></member>
-      <member refid="class_external_collection_1a6e5d752190317e50ecf21ec441b221a9" prot="private" virt="non-virtual"><scope>ExternalCollection</scope><name>getlibs</name></member>
-      <member refid="class_external_collection_1adf8e06496580d4c2725de7ab74b48df2" prot="public" virt="non-virtual"><scope>ExternalCollection</scope><name>initialize</name></member>
-      <member refid="class_external_collection_1ab9b907f1aef03d99e7d1c050b06171f2" prot="private" virt="non-virtual"><scope>ExternalCollection</scope><name>itr</name></member>
-      <member refid="class_external_collection_1a8a04d8db32022e54f155c942d898afad" prot="private" virt="non-virtual"><scope>ExternalCollection</scope><name>sitr</name></member>
-      <member refid="class_external_collection_1a56fa2783bad9ecb6f3efaf47659d2a69" prot="public" virt="non-virtual"><scope>ExternalCollection</scope><name>~ExternalCollection</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_external_force.xml b/doxyxml/class_external_force.xml
deleted file mode 100644
index 5f6ab70..0000000
--- a/doxyxml/class_external_force.xml
+++ /dev/null
@@ -1,473 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_external_force" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>ExternalForce</compoundname>
-    <basecompoundref refid="class_pot_accel" prot="public" virt="non-virtual">PotAccel</basecompoundref>
-    <derivedcompoundref refid="class_halo_bulge" prot="public" virt="non-virtual">HaloBulge</derivedcompoundref>
-    <derivedcompoundref refid="class_periodic_b_c" prot="public" virt="non-virtual">PeriodicBC</derivedcompoundref>
-    <derivedcompoundref refid="class_scatter_m_f_p" prot="public" virt="non-virtual">ScatterMFP</derivedcompoundref>
-    <derivedcompoundref refid="class_user_bar" prot="public" virt="non-virtual">UserBar</derivedcompoundref>
-    <derivedcompoundref refid="class_user_disk" prot="public" virt="non-virtual">UserDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_user_halo" prot="public" virt="non-virtual">UserHalo</derivedcompoundref>
-    <derivedcompoundref refid="class_user_log_pot" prot="public" virt="non-virtual">UserLogPot</derivedcompoundref>
-    <derivedcompoundref refid="class_user_m_ndisk" prot="public" virt="non-virtual">UserMNdisk</derivedcompoundref>
-    <derivedcompoundref refid="class_user_m_w" prot="public" virt="non-virtual">UserMW</derivedcompoundref>
-    <derivedcompoundref refid="class_user_test" prot="public" virt="non-virtual">UserTest</derivedcompoundref>
-    <derivedcompoundref refid="class_user_test_cuda" prot="public" virt="non-virtual">UserTestCuda</derivedcompoundref>
-    <derivedcompoundref refid="classexternal_shock" prot="public" virt="non-virtual">externalShock</derivedcompoundref>
-    <derivedcompoundref refid="classgenerate_relaxation" prot="public" virt="non-virtual">generateRelaxation</derivedcompoundref>
-    <derivedcompoundref refid="classtidal_field" prot="public" virt="non-virtual">tidalField</derivedcompoundref>
-    <includes refid="_external_force_8_h" local="no">ExternalForce.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_external_force_1a19f77a4862205b82b4e3bb126880ad6e" prot="public" static="no" mutable="no">
-        <type>string</type>
-        <definition>string ExternalForce::id</definition>
-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>ExternalForce::id</qualifiedname>
-        <briefdescription>
-<para>Name of external force (mnemonic) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="37" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ExternalForce.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_external_force_1a289f6465cc44b742f7b202c9827ea0d9" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void ExternalForce::determine_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>ExternalForce::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Used by get_acceleration_and_potential to request that the expansion be performed. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="16" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_force_1ad7749fd6dc7d2a6090342719d517e029" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * ExternalForce::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
-        <qualifiedname>ExternalForce::determine_coefficients_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49">determine_coefficients_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the expansion computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="18" column="9"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-func">
-      <memberdef kind="function" id="class_external_force_1a867ae9794c9b543385020b748b4a843c" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void ExternalForce::determine_acceleration_and_potential</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>ExternalForce::determine_acceleration_and_potential</qualifiedname>
-        <reimplementedby refid="class_periodic_b_c_1a0598b63d8360fd65ae9fd9de87063fb3">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_user_bar_1a2a4b5ef5b4078fb6bea453c66da7bb86">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_user_disk_1a746f8721535a9ec41cc895f1c7d5877e">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_user_halo_1a00cd6356aaf074d5d95833ef38c0b009">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_user_log_pot_1ad7133702147a1aa09c6cca20fc3571fa">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_user_m_ndisk_1aa9c8ae0899ca88f62abf4e370a337e54">determine_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_user_m_w_1ac92e9fd5d8afd936cc9c8e38518a6f78">determine_acceleration_and_potential</reimplementedby>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Called to evaluate acceleration Default version calls the provided thread function. Can be overloaded to provide additional non-threaded tasks. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="27" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_force_1a67ec1347079ac96a23e4b850857c5a53" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void ExternalForce::print_divider</definition>
-        <argsstring>(void)</argsstring>
-        <name>print_divider</name>
-        <qualifiedname>ExternalForce::print_divider</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>User info divider Make demarcation in output log </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="32" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_external_force_1ae23fdc9cb99c6c1f8884b518659bfc5a" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void *</type>
-        <definition>virtual void * ExternalForce::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)=0</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>ExternalForce::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <reimplementedby refid="classexternal_shock_1a7b36ac63aab2b4f57d462c69e7ddcc5f">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="classgenerate_relaxation_1a66c5fc35b449efddbfbb4bf5714e37af">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_halo_bulge_1a074e71a1b6a7aa2ea671eaa6e3b695f6">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_periodic_b_c_1abe1ad73f43444f2fdc99b50901ff47ec">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_scatter_m_f_p_1a20878d4447a6676b5a0000786084a1b8">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="classtidal_field_1a0611f1ed21d4c7ae731957a1ca204c0c">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_user_bar_1a5a9192b82fcfd7a47b31c54fc8c73743">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_user_disk_1a67f79bc4033b8bdeea46726e1a446eeb">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_user_halo_1aebfb1fc004e1edca783070360bbbf89d">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_user_log_pot_1aaf3f6c95cc70aafac9e48c80699cc345">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_user_m_ndisk_1ab6ddfc877fa2f0c71e30b64c3adf2e55">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_user_m_w_1a4f99cd18a43e8cd2c7abc43ff82c6300">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_user_test_1ac78cfdc94f72ce10ced2a99ea1f1e957">determine_acceleration_and_potential_thread</reimplementedby>
-        <reimplementedby refid="class_user_test_cuda_1aa7e4af758db34fc79cc84145b798b03b">determine_acceleration_and_potential_thread</reimplementedby>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="51" column="17"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_force_1a05aa158b28c4bb8665bb07f23a98e234" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>ExternalForce::ExternalForce</definition>
-        <argsstring>(const YAML::Node &amp;config)</argsstring>
-        <name>ExternalForce</name>
-        <qualifiedname>ExternalForce::ExternalForce</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>config</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>line</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>passes any parameters to the method </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="41" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_force_1a3ab7afbf87f6bbc2338ef6f61265b16f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void ExternalForce::finish</definition>
-        <argsstring>()</argsstring>
-        <name>finish</name>
-        <qualifiedname>ExternalForce::finish</qualifiedname>
-        <briefdescription>
-<para>Finish and clean-up (caching data necessary for restart) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="54" column="16" bodyfile="/home/weinberg/Projects/EXP/src/ExternalForce.H" bodystart="54" bodyend="54"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_force_1a0d4186a622ace64c9881fd231cf165c6" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void ExternalForce::get_acceleration_and_potential</definition>
-        <argsstring>(Component *compIn)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>ExternalForce::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <reimplementedby refid="class_scatter_m_f_p_1acdb78f570e82b0efa8740df0a98912b7">get_acceleration_and_potential</reimplementedby>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>compIn</declname>
-        </param>
-        <briefdescription>
-<para>Will be called by clients to evaluate force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="47" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_external_force_1a18d27a313558c1ca3a536121571fe9ec" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual ExternalForce::~ExternalForce</definition>
-        <argsstring>()</argsstring>
-        <name>~ExternalForce</name>
-        <qualifiedname>ExternalForce::~ExternalForce</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ExternalForce.H" line="44" column="11" bodyfile="/home/weinberg/Projects/EXP/src/ExternalForce.H" bodystart="44" bodyend="44"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>External force <ref refid="class_pot_accel" kindref="compound">PotAccel</ref> members. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>This does little but make sure that user is not loading a class that is not designed to be an external force. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>HaloBulge</label>
-        <link refid="class_halo_bulge"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PeriodicBC</label>
-        <link refid="class_periodic_b_c"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="5">
-        <label>ScatterMFP</label>
-        <link refid="class_scatter_m_f_p"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>UserBar</label>
-        <link refid="class_user_bar"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>UserDisk</label>
-        <link refid="class_user_disk"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>UserHalo</label>
-        <link refid="class_user_halo"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>UserLogPot</label>
-        <link refid="class_user_log_pot"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>UserMNdisk</label>
-        <link refid="class_user_m_ndisk"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>UserMW</label>
-        <link refid="class_user_m_w"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>UserTest</label>
-        <link refid="class_user_test"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>UserTestCuda</label>
-        <link refid="class_user_test_cuda"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>externalShock</label>
-        <link refid="classexternal_shock"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>generateRelaxation</label>
-        <link refid="classgenerate_relaxation"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="16">
-        <label>tidalField</label>
-        <link refid="classtidal_field"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="4">
-        <label>Component</label>
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diff --git a/doxyxml/class_f_d_i_s_t.xml b/doxyxml/class_f_d_i_s_t.xml
deleted file mode 100644
index 560ee99..0000000
--- a/doxyxml/class_f_d_i_s_t.xml
+++ /dev/null
@@ -1,156 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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deleted file mode 100644
index 78b3150..0000000
--- a/doxyxml/class_f_d_i_s_t_c.xml
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deleted file mode 100644
index 93d7e34..0000000
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deleted file mode 100644
index 90c949d..0000000
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deleted file mode 100644
index c02bf89..0000000
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diff --git a/doxyxml/class_file_open_error.xml b/doxyxml/class_file_open_error.xml
deleted file mode 100644
index 0fa2db9..0000000
--- a/doxyxml/class_file_open_error.xml
+++ /dev/null
@@ -1,154 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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diff --git a/doxyxml/class_find_orb.xml b/doxyxml/class_find_orb.xml
deleted file mode 100644
index 4e9eb5f..0000000
--- a/doxyxml/class_find_orb.xml
+++ /dev/null
@@ -1,439 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-      <memberdef kind="variable" id="class_find_orb_1adaf6d5d0ed3f5edae681b2cb4aee3171" prot="private" static="no" mutable="no">
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-        <definition>std::shared_ptr&lt;SphericalOrbit&gt; FindOrb::orb</definition>
-        <argsstring></argsstring>
-        <name>orb</name>
-        <qualifiedname>FindOrb::orb</qualifiedname>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="17" column="19" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="17" bodyend="-1"/>
-        <referencedby refid="class_find_orb_1a2ee2cbd0107340d78e9e0742b77953de" compoundref="_find_orb_8_h" startline="51" endline="51">Orb</referencedby>
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-      <memberdef kind="variable" id="class_find_orb_1a1bc9ff07e6bcf226e4b11b90556d5df5" prot="private" static="no" mutable="no">
-        <type>double</type>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="21" column="14" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="21" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_find_orb_1a556ec502d7b3b6b0bcca57d12f2b9aa5" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double FindOrb::rate</definition>
-        <argsstring></argsstring>
-        <name>rate</name>
-        <qualifiedname>FindOrb::rate</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="22" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double FindOrb::EFAC</definition>
-        <argsstring></argsstring>
-        <name>EFAC</name>
-        <qualifiedname>FindOrb::EFAC</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="37" column="17" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="37" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double FindOrb::KMAX</definition>
-        <argsstring></argsstring>
-        <name>KMAX</name>
-        <qualifiedname>FindOrb::KMAX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="33" column="17" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="33" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_find_orb_1a5e8ea20f31452f2ec5af72ea7755850d" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double FindOrb::KMIN</definition>
-        <argsstring></argsstring>
-        <name>KMIN</name>
-        <qualifiedname>FindOrb::KMIN</qualifiedname>
-        <briefdescription>
-<para>Defaults. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="32" column="17" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="32" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_find_orb_1a6d038e4980807120048af21c483366ad" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int FindOrb::MAXIT</definition>
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-        <qualifiedname>FindOrb::MAXIT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="34" column="17" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="34" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool FindOrb::MELT</definition>
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-        <name>MELT</name>
-        <qualifiedname>FindOrb::MELT</qualifiedname>
-        <briefdescription>
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-        <type>double</type>
-        <definition>double FindOrb::RATE</definition>
-        <argsstring></argsstring>
-        <name>RATE</name>
-        <qualifiedname>FindOrb::RATE</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="36" column="17" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="36" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_find_orb_1a03a256981bb4917198b16651dcc2603b" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double FindOrb::T0</definition>
-        <argsstring></argsstring>
-        <name>T0</name>
-        <qualifiedname>FindOrb::T0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="38" column="17" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="38" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void FindOrb::mapvars</definition>
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-        <name>mapvars</name>
-        <qualifiedname>FindOrb::mapvars</qualifiedname>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>ee</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>kk</declname>
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-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="25" column="8"/>
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-        <type>double</type>
-        <definition>double FindOrb::operator()</definition>
-        <argsstring>(std::vector&lt; double &gt; &amp;ek)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>FindOrb::operator()</qualifiedname>
-        <param>
-          <type>std::vector&lt; double &gt; &amp;</type>
-          <declname>ek</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="26" column="10"/>
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-        <type><ref refid="struct_orb_values" kindref="compound">OrbValues</ref></type>
-        <definition>OrbValues FindOrb::Anneal</definition>
-        <argsstring>()</argsstring>
-        <name>Anneal</name>
-        <qualifiedname>FindOrb::Anneal</qualifiedname>
-        <briefdescription>
-<para>Do the work! </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="48" column="13"/>
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-        <type></type>
-        <definition>FindOrb::FindOrb</definition>
-        <argsstring>(std::shared_ptr&lt; AxiSymModel &gt; mod, double PERI, double APO)</argsstring>
-        <name>FindOrb</name>
-        <qualifiedname>FindOrb::FindOrb</qualifiedname>
-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-          <declname>mod</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>PERI</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>APO</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="42" column="3"/>
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-        <type><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref> &amp;</type>
-        <definition>SphericalOrbit &amp; FindOrb::Orb</definition>
-        <argsstring>()</argsstring>
-        <name>Orb</name>
-        <qualifiedname>FindOrb::Orb</qualifiedname>
-        <briefdescription>
-<para>Return the orbit instance (presumably now at minimum) </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="51" column="18" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="51" bodyend="51"/>
-        <references refid="class_find_orb_1adaf6d5d0ed3f5edae681b2cb4aee3171" compoundref="_find_orb_8_h" startline="17">orb</references>
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-        <type></type>
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-        <name>~FindOrb</name>
-        <qualifiedname>FindOrb::~FindOrb</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="45" column="3"/>
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-    <detaileddescription>
-    </detaileddescription>
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-      <node id="1">
-        <label>FindOrb</label>
-        <link refid="class_find_orb"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>std::function&lt; double(std::vector&lt; double &gt; &amp;)&gt;</label>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
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-        <label>FindOrb</label>
-        <link refid="class_find_orb"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>std::function&lt; double(std::vector&lt; double &gt; &amp;)&gt;</label>
-      </node>
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-    <location file="/home/weinberg/Projects/EXP/include/FindOrb.H" line="14" column="1" bodyfile="/home/weinberg/Projects/EXP/include/FindOrb.H" bodystart="15" bodyend="52"/>
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-      <member refid="class_find_orb_1a383f40793e9b14ee86be365305d8f3e5" prot="public" virt="non-virtual"><scope>FindOrb</scope><name>RATE</name></member>
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diff --git a/doxyxml/class_flat_disk.xml b/doxyxml/class_flat_disk.xml
deleted file mode 100644
index 5c32363..0000000
--- a/doxyxml/class_flat_disk.xml
+++ /dev/null
@@ -1,1303 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_flat_disk" kind="class" language="C++" prot="public">
-    <compoundname>FlatDisk</compoundname>
-    <basecompoundref refid="class_polar_basis" prot="public" virt="non-virtual">PolarBasis</basecompoundref>
-    <includes refid="_flat_disk_8_h" local="no">FlatDisk.H</includes>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_flat_disk_1ac006bf5130da0326357efebf23e49dea" prot="private" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_emp_cyl2d_1_1_model_cyl" kindref="compound">EmpCyl2d::ModelCyl</ref> &gt;</type>
-        <definition>using FlatDisk::Disk2d =  std::shared_ptr&lt;EmpCyl2d::ModelCyl&gt;</definition>
-        <argsstring></argsstring>
-        <name>Disk2d</name>
-        <qualifiedname>FlatDisk::Disk2d</qualifiedname>
-        <briefdescription>
-<para>Background instance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="88" column="3" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="88" bodyend="-1"/>
-      </memberdef>
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-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_flat_disk_1ac81dad1d2fc54b67f5aca603916f112c" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double FlatDisk::acyltbl</definition>
-        <argsstring></argsstring>
-        <name>acyltbl</name>
-        <qualifiedname>FlatDisk::acyltbl</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="105" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="105" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a990e9606b5f56506fcc9f8d1fcd97a15" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string FlatDisk::biorth</definition>
-        <argsstring></argsstring>
-        <name>biorth</name>
-        <qualifiedname>FlatDisk::biorth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="110" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="110" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a50ea5cdeac07d334db7b0f1c2f7e714a" prot="private" static="no" mutable="no">
-        <type><ref refid="class_flat_disk_1ac006bf5130da0326357efebf23e49dea" kindref="member">Disk2d</ref></type>
-        <definition>Disk2d FlatDisk::disk</definition>
-        <argsstring></argsstring>
-        <name>disk</name>
-        <qualifiedname>FlatDisk::disk</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="89" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="89" bodyend="-1"/>
-        <referencedby refid="class_flat_disk_1a7605820abb7e8222f48e04c25209f20b" compoundref="_flat_disk_8_h" startline="96" endline="97">background</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a829b341fce5b6656537225116a0a70cd" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool FlatDisk::dump_basis</definition>
-        <argsstring></argsstring>
-        <name>dump_basis</name>
-        <qualifiedname>FlatDisk::dump_basis</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="116" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="116" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a015184ce4a14ed1fd6e96584d003c5b0" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int FlatDisk::knots</definition>
-        <argsstring></argsstring>
-        <name>knots</name>
-        <qualifiedname>FlatDisk::knots</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="108" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="108" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a91d1dd1d35d2b21c717f8b8d6fc73201" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool FlatDisk::logr</definition>
-        <argsstring></argsstring>
-        <name>logr</name>
-        <qualifiedname>FlatDisk::logr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="111" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="111" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a20ea051932dcf9a890c64230050ebaae" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int FlatDisk::mmax</definition>
-        <argsstring></argsstring>
-        <name>mmax</name>
-        <qualifiedname>FlatDisk::mmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="107" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="107" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a8f34e318bd07c46deb0d65e9e23bf05b" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string FlatDisk::model</definition>
-        <argsstring></argsstring>
-        <name>model</name>
-        <qualifiedname>FlatDisk::model</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="109" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="109" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a678a676a416f83fde29fc47674e279d7" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int FlatDisk::numr</definition>
-        <argsstring></argsstring>
-        <name>numr</name>
-        <qualifiedname>FlatDisk::numr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="106" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="106" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" prot="private" static="no" mutable="no">
-        <type><ref refid="_flat_disk_8_h_1a44ac299dfbdd6e45965acbe30c201240" kindref="member">CylPtr</ref></type>
-        <definition>CylPtr FlatDisk::ortho</definition>
-        <argsstring></argsstring>
-        <name>ortho</name>
-        <qualifiedname>FlatDisk::ortho</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="63" column="10" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="63" bodyend="-1"/>
-        <referencedby refid="class_flat_disk_1a4d17639bc22514aa13b0c20ddc62c315" compoundref="_flat_disk_8_h" startline="121" endline="122">get_pot</referencedby>
-        <referencedby refid="class_flat_disk_1a60547addec40a8e202c206ff94497843" compoundref="_flat_disk_8_h" startline="72" endline="72">getRtable</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1ab46447ce29362256e6216ae996c73a1a" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double FlatDisk::rcylmax</definition>
-        <argsstring></argsstring>
-        <name>rcylmax</name>
-        <qualifiedname>FlatDisk::rcylmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="105" column="32" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="105" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a84f29ab9899e8a21d9761bd20108c2a7" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double FlatDisk::rcylmin</definition>
-        <argsstring></argsstring>
-        <name>rcylmin</name>
-        <qualifiedname>FlatDisk::rcylmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="105" column="24" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="105" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_flat_disk_1a20a52477e571fea4c0f80e5308db97ed" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double FlatDisk::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>FlatDisk::scale</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="105" column="18" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="105" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_flat_disk_1a383ce35717432fd54ec31007114ee2dc" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; FlatDisk::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>FlatDisk::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="114" column="25" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="114" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_flat_disk_1a7605820abb7e8222f48e04c25209f20b" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>std::tuple&lt; double, double, double &gt;</type>
-        <definition>virtual std::tuple&lt; double, double, double &gt; FlatDisk::background</definition>
-        <argsstring>(double r, double z)</argsstring>
-        <name>background</name>
-        <qualifiedname>FlatDisk::background</qualifiedname>
-        <reimplements refid="class_polar_basis_1a89ded72802c057e9900f24d493f9dce3">background</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Background evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="96" column="3" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="96" bodyend="97"/>
-        <references refid="class_flat_disk_1a50ea5cdeac07d334db7b0f1c2f7e714a" compoundref="_flat_disk_8_h" startline="89">disk</references>
-      </memberdef>
-      <memberdef kind="function" id="class_flat_disk_1a661d3b56742b8816e6ddb5ef60a1764d" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void FlatDisk::get_dens</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>FlatDisk::get_dens</qualifiedname>
-        <reimplements refid="class_polar_basis_1a7e4f51d9a6cb765a29e4a90c6020b3fe">get_dens</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="99" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_flat_disk_1a22f0831bd87fafebf499abc0556c0d60" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void FlatDisk::get_dpotl</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dpr, Eigen::MatrixXd &amp;dpz, int tid)</argsstring>
-        <name>get_dpotl</name>
-        <qualifiedname>FlatDisk::get_dpotl</qualifiedname>
-        <reimplements refid="class_polar_basis_1a35dcc79a47abe1c6de84dbdb9203896d">get_dpotl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpr</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpz</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dpr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dpz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="67" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_flat_disk_1adfae4fe4709805480d401787378b14ef" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void FlatDisk::get_potl</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>FlatDisk::get_potl</qualifiedname>
-        <reimplements refid="class_polar_basis_1a5bd90a17ffb1b1f7e06fdb9a9861b9e9">get_potl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="70" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_flat_disk_1a9fbcdede578288260d155e0033de33d1" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void FlatDisk::get_potl_dens</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;d, int tid)</argsstring>
-        <name>get_potl_dens</name>
-        <qualifiedname>FlatDisk::get_potl_dens</qualifiedname>
-        <reimplements refid="class_polar_basis_1ae897c7f6610ad01ab9c69d47e836d3dd">get_potl_dens</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get the potential and density <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="101" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_flat_disk_1a60547addec40a8e202c206ff94497843" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double FlatDisk::getRtable</definition>
-        <argsstring>()</argsstring>
-        <name>getRtable</name>
-        <qualifiedname>FlatDisk::getRtable</qualifiedname>
-        <reimplements refid="class_polar_basis_1adfeabbff17849499d42172409cde90ee">getRtable</reimplements>
-        <briefdescription>
-<para>Get table scale. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="72" column="18" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="72" bodyend="72"/>
-        <references refid="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" compoundref="_flat_disk_8_h" startline="63">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_flat_disk_1a99ce7aa447bc828ce26a69cf18136556" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void FlatDisk::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>FlatDisk::initialize</qualifiedname>
-        <reimplements refid="class_polar_basis_1a5b49aa8ebe308a9f089b52478ee4db11">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Initialize method. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="65" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_flat_disk_1af564a3c779bd3f731e90de066198f02f" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void FlatDisk::setBackground</definition>
-        <argsstring>()</argsstring>
-        <name>setBackground</name>
-        <qualifiedname>FlatDisk::setBackground</qualifiedname>
-        <briefdescription>
-<para>Set background from YAML. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="92" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-func">
-      <memberdef kind="function" id="class_flat_disk_1a4d17639bc22514aa13b0c20ddc62c315" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>void FlatDisk::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;Vc, Eigen::MatrixXd &amp;Vs, double r, double z)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>FlatDisk::get_pot</qualifiedname>
-        <reimplements refid="class_polar_basis_1adacb1bb523e1ed452d7075cf6b97135f">get_pot</reimplements>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>Vc</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>Vs</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Use <ref refid="class_biorth_cyl" kindref="compound">BiorthCyl</ref> to evaluate the basis at r, z. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="121" column="8" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="121" bodyend="122"/>
-        <references refid="class_flat_disk_1aa8f816e88d31d95ef9ed39082b81bb4f" compoundref="_flat_disk_8_h" startline="63">ortho</references>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_flat_disk_1aaf97cb50ba9e2c8a8ef6a838f96a4e47" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>FlatDisk::FlatDisk</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf, MixtureBasis *m=0)</argsstring>
-        <name>FlatDisk</name>
-        <qualifiedname>FlatDisk::FlatDisk</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <param>
-          <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-          <declname>m</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (<ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>conf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>passes any parameters to basis instance (rsphSL, rmin and numr </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>m</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>allows the spherical basis to be used for multiple center expansions</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Input line parameters include: <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>rs</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radius for coordinate scaling </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of radial grid points </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmap</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true for scaling coordinates from the semi-infinite to finite segment </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>diverge</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true means assume a cuspy profile </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dfac</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the power of the &quot;divergent&quot; cusp </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>modelname</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the file containing the input background model profile </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dtime</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the interval between basis recomputations (&lt;=0 for never) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="140" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_flat_disk_1a508a4d23c2eee77a4259a9519ba74cf8" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual FlatDisk::~FlatDisk</definition>
-        <argsstring>()</argsstring>
-        <name>~FlatDisk</name>
-        <qualifiedname>FlatDisk::~FlatDisk</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="143" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Computes the potential, acceleration and density using an empirical function analysis for a flat <ref refid="class_bessel" kindref="compound">Bessel</ref> basis and a target density</para>
-<para>Parameters</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>rcylmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum value in the table for the radial basis functions (default is 0.0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rcylmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum value in the table for the radial basis functions in acyltbl units (default is 10.0)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>scale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the expansion factor to get the physical scale from the internal scale (default is 0.01)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum azimuthal order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numx</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of grid points in the scaled radial direction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numy</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of grid points in the scaled vertical direction</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>knots</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of quadrature points for <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref></para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>logr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>scales the <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref> grid logarithmically</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>model</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>name for conditioning the new basis using <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref> (default: expon)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>biorth</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the biorthogonal basis set used by <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref> for conditioning (default: bess)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>background</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>sets a fixed monopole potential and force for the model. Used for stability analysis of disks with active and inactive tapers, following Zang</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmaxfid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order for the basis used by <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref> for conditioning</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of grid points in the radial direction for the numerical basis in <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref></para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>NQDHT</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of grid points for the numerical Hankel transform</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>diskconf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is a YAML configuration for the target disk model in <ref refid="class_emp_cyl2d" kindref="compound">EmpCyl2d</ref></para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cachename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the cache file for the newly constructed basis</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dumpbasis</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>provides the user with a ascii table of the basis potential-density pairs </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="3">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>FlatDisk</label>
-        <link refid="class_flat_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PolarBasis</label>
-        <link refid="class_polar_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="3">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="10" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="9">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="1">
-        <label>FlatDisk</label>
-        <link refid="class_flat_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>MixtureBasis</label>
-        <link refid="class_mixture_basis"/>
-        <childnode refid="16" relation="usage">
-          <edgelabel>p</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="9" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PolarBasis</label>
-        <link refid="class_polar_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-        <childnode refid="11" relation="usage">
-          <edgelabel>covV</edgelabel>
-        </childnode>
-        <childnode refid="13" relation="usage">
-          <edgelabel>covM</edgelabel>
-        </childnode>
-        <childnode refid="15" relation="usage">
-          <edgelabel>mix</edgelabel>
-        </childnode>
-      </node>
-      <node id="13">
-        <label>PolarBasis::CoefMatrix</label>
-        <link refid="struct_polar_basis_1_1_coef_matrix"/>
-        <childnode refid="14" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>PolarBasis::CoefVector</label>
-        <link refid="struct_polar_basis_1_1_coef_vector"/>
-        <childnode refid="12" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="10">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="16">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>exp_in</edgelabel>
-          <edgelabel>exp_out</edgelabel>
-        </childnode>
-        <childnode refid="15" relation="usage">
-          <edgelabel>mix_in</edgelabel>
-          <edgelabel>mix_out</edgelabel>
-        </childnode>
-      </node>
-      <node id="14">
-        <label>std::vector&lt; std::vector&lt; MatrixM &gt; &gt;</label>
-      </node>
-      <node id="12">
-        <label>std::vector&lt; std::vector&lt; VectorM &gt; &gt;</label>
-      </node>
-      <node id="6">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/FlatDisk.H" line="58" column="1" bodyfile="/home/weinberg/Projects/EXP/src/FlatDisk.H" bodystart="59" bodyend="144"/>
-    <listofallmembers>
-      <member refid="class_flat_disk_1ac81dad1d2fc54b67f5aca603916f112c" prot="private" virt="non-virtual"><scope>FlatDisk</scope><name>acyltbl</name></member>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>FlatDisk</scope><name>atol</name></member>
-      <member refid="class_axisymmetric_basis_1ab965e325410d79d567903f51dd2c6dd0" prot="public" virt="non-virtual"><scope>FlatDisk</scope><name>AxisymmetricBasis</name></member>
-      <member refid="class_axisymmetric_basis_1aa4fc18ccf44bdf56ac60b7caa68b1cfc" prot="private" virt="non-virtual"><scope>FlatDisk</scope><name>b_Hall</name></member>
-      <member refid="class_flat_disk_1a7605820abb7e8222f48e04c25209f20b" prot="private" virt="virtual"><scope>FlatDisk</scope><name>background</name></member>
-      <member refid="class_basis_1a3deeb360a898d1c144f7f6ad44813b3e" prot="public" virt="non-virtual"><scope>FlatDisk</scope><name>Basis</name></member>
-      <member refid="class_flat_disk_1a990e9606b5f56506fcc9f8d1fcd97a15" prot="private" virt="non-virtual"><scope>FlatDisk</scope><name>biorth</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>cC</name></member>
-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>FlatDisk</scope><name>cc_lock</name></member>
-      <member refid="class_polar_basis_1ac71935d93632a102114d3f7d3cc52656" prot="protected" virt="virtual"><scope>FlatDisk</scope><name>check_range</name></member>
-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>FlatDisk</scope><name>ClearExternal</name></member>
-      <member refid="class_polar_basis_1a88caee4e6225bee5a620dd123944641a" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>cmagic</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>coef_dump</name></member>
-      <member refid="class_polar_basis_1a41aced55714de2c225f7a2f19fe3b596" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>coefMaster</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>FlatDisk</scope><name>compute</name></member>
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-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>conf</name></member>
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-      <member refid="class_polar_basis_1acf405ea76324f560aa152c596de1228c" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>covV</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>FlatDisk</scope><name>cube</name></member>
-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>cuda_aware</name></member>
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-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>current_keys</name></member>
-      <member refid="class_polar_basis_1a79001ab9c1f4d7756828473039736910" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>cylCoefs</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>FlatDisk</scope><name>cylinder</name></member>
-      <member refid="class_polar_basis_1a08dfe64d5a1733ffe27bde9b1bf16d51" prot="protected" virt="non-virtual"><scope>FlatDisk</scope><name>cylmass</name></member>
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diff --git a/doxyxml/class_frame___rotation.xml b/doxyxml/class_frame___rotation.xml
deleted file mode 100644
index 3cb1f65..0000000
--- a/doxyxml/class_frame___rotation.xml
+++ /dev/null
@@ -1,114 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_frame___rotation" kind="class" language="C++" prot="public">
-    <compoundname>Frame_Rotation</compoundname>
-    <includes refid="phase_8_h" local="no">phase.H</includes>
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-        <type>double</type>
-        <definition>double Frame_Rotation::omega</definition>
-        <argsstring></argsstring>
-        <name>omega</name>
-        <qualifiedname>Frame_Rotation::omega</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="144" column="10" bodyfile="/home/weinberg/Projects/EXP/include/phase.H" bodystart="144" bodyend="-1"/>
-        <referencedby refid="class_frame___rotation_1ade2f22db7a7fbf631603272e4504ef8c" compoundref="phase_8_h" startline="151" endline="157">set_corotation</referencedby>
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diff --git a/doxyxml/class_func1d.xml b/doxyxml/class_func1d.xml
deleted file mode 100644
index 684b6cb..0000000
--- a/doxyxml/class_func1d.xml
+++ /dev/null
@@ -1,49 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-        <qualifiedname>Func1d::CostFunction</qualifiedname>
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-          <type>double *</type>
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diff --git a/doxyxml/class_gauss_quad.xml b/doxyxml/class_gauss_quad.xml
deleted file mode 100644
index f485367..0000000
--- a/doxyxml/class_gauss_quad.xml
+++ /dev/null
@@ -1,328 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_gauss_quad" kind="class" language="C++" prot="public">
-    <compoundname>GaussQuad</compoundname>
-    <derivedcompoundref refid="class_herm_quad" prot="public" virt="non-virtual">HermQuad</derivedcompoundref>
-    <derivedcompoundref refid="class_jaco_quad" prot="public" virt="non-virtual">JacoQuad</derivedcompoundref>
-    <derivedcompoundref refid="class_lagu_quad" prot="public" virt="non-virtual">LaguQuad</derivedcompoundref>
-    <includes refid="gauss_q_8_h" local="no">gaussQ.H</includes>
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-        <argsstring></argsstring>
-        <name>alpha</name>
-        <qualifiedname>GaussQuad::alpha</qualifiedname>
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-        </briefdescription>
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-        <name>FunctionID</name>
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diff --git a/doxyxml/class_gen_lagu.xml b/doxyxml/class_gen_lagu.xml
deleted file mode 100644
index b9ca90c..0000000
--- a/doxyxml/class_gen_lagu.xml
+++ /dev/null
@@ -1,258 +0,0 @@
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-        <qualifiedname>GenLagu::alpha</qualifiedname>
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diff --git a/doxyxml/class_generalized_polytrope.xml b/doxyxml/class_generalized_polytrope.xml
deleted file mode 100644
index e38e3f8..0000000
--- a/doxyxml/class_generalized_polytrope.xml
+++ /dev/null
@@ -1,584 +0,0 @@
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diff --git a/doxyxml/class_generic_error.xml b/doxyxml/class_generic_error.xml
deleted file mode 100644
index e2b2632..0000000
--- a/doxyxml/class_generic_error.xml
+++ /dev/null
@@ -1,108 +0,0 @@
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-        <references refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" compoundref="_e_x_p_exception_8_h" startline="95">EXPException::errormessage</references>
-        <references refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" compoundref="_e_x_p_exception_8_h" startline="92">EXPException::exceptionname</references>
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-        <references refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" compoundref="_e_x_p_exception_8_h" startline="98">EXPException::msg_</references>
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-      <member refid="class_e_x_p_exception_1aba9356b726727d39e19c88ca2be5e846" prot="public" virt="virtual"><scope>GenericError</scope><name>~EXPException</name></member>
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diff --git a/doxyxml/class_grid2_d.xml b/doxyxml/class_grid2_d.xml
deleted file mode 100644
index 42fc324..0000000
--- a/doxyxml/class_grid2_d.xml
+++ /dev/null
@@ -1,319 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_grid2_d" kind="class" language="C++" prot="public">
-    <compoundname>Grid2D</compoundname>
-    <includes refid="_grid2_d_8_h" local="no">Grid2D.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; Grid2D::dens</definition>
-        <argsstring></argsstring>
-        <name>dens</name>
-        <qualifiedname>Grid2D::dens</qualifiedname>
-        <briefdescription>
-<para>Data store (flattened into a single vector) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" line="27" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" bodystart="27" bodyend="-1"/>
-        <referencedby refid="class_grid2_d_1aed116c892588ab434fc298e03f06dbe2" compoundref="_grid2_d_8_h" startline="41" endline="47">addPoint</referencedby>
-        <referencedby refid="class_grid2_d_1a659da1bccd65da697b45f6b660197a13" compoundref="_grid2_d_8_h" startline="31" endline="35">Grid2D</referencedby>
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-        <referencedby refid="class_grid2_d_1a87db0c90847f58f98959ec17bdd1f184" compoundref="_grid2_d_8_h" startline="110" endline="115">sync</referencedby>
-        <referencedby refid="class_grid2_d_1a7247cf15129bd6d34e1b6c95ac265af0" compoundref="_grid2_d_8_h" startline="118" endline="127">write</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_grid2_d_1a6a207f6a41a1aa3c7688e9ee910f28eb" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Grid2D::dr</definition>
-        <argsstring></argsstring>
-        <name>dr</name>
-        <qualifiedname>Grid2D::dr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" line="22" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_grid2_d_1aed116c892588ab434fc298e03f06dbe2" compoundref="_grid2_d_8_h" startline="41" endline="47">addPoint</referencedby>
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-        <referencedby refid="class_grid2_d_1abad8a36ba11951796e836c60c99b8c31" compoundref="_grid2_d_8_h" startline="50" endline="104">operator()</referencedby>
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-        <type>int</type>
-        <definition>int Grid2D::N</definition>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" line="23" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" bodystart="23" bodyend="-1"/>
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-<para>Parameters. </para>
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-        </inbodydescription>
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-        </inbodydescription>
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-        <name>addPoint</name>
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-        <param>
-          <type>double</type>
-          <declname>y</declname>
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-<para>Add. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" line="41" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" bodystart="41" bodyend="47"/>
-        <references refid="class_grid2_d_1a0d78e0fa8d6e82bdefdab3d96051a5f0" compoundref="_grid2_d_8_h" startline="27">dens</references>
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-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" line="31" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" bodystart="31" bodyend="35"/>
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-          <type>std::istream &amp;</type>
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-<para>Constructor from istream (restore from cache file) </para>
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-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" line="38" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" bodystart="38" bodyend="38"/>
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-        <param>
-          <type>double</type>
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-<para>Get density. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" line="50" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" bodystart="50" bodyend="104"/>
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-<para>Read from file. </para>
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-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" line="130" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/Grid2D.H" bodystart="130" bodyend="139"/>
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-<para>Get time. </para>
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diff --git a/doxyxml/class_h_q_sphere.xml b/doxyxml/class_h_q_sphere.xml
deleted file mode 100644
index 32e99e3..0000000
--- a/doxyxml/class_h_q_sphere.xml
+++ /dev/null
@@ -1,494 +0,0 @@
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-        <type></type>
-        <definition>virtual HQSphere::~HQSphere</definition>
-        <argsstring>()</argsstring>
-        <name>~HQSphere</name>
-        <qualifiedname>HQSphere::~HQSphere</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        </childnode>
-      </node>
-      <node id="3">
-        <label>Biorth</label>
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-      </node>
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-    </inheritancegraph>
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-        </childnode>
-      </node>
-      <node id="3">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
-      </node>
-      <node id="1">
-        <label>HQSphere</label>
-        <link refid="class_h_q_sphere"/>
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-    </collaborationgraph>
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-      <member refid="class_h_q_sphere_1a194e1e87c7d017e8a567acf91f8f8e54" prot="private" virt="non-virtual"><scope>HQSphere</scope><name>rbmin</name></member>
-      <member refid="class_axi_sym_biorth_1adcf402d63d58581bfb671cc97b213222" prot="public" virt="virtual"><scope>HQSphere</scope><name>~AxiSymBiorth</name></member>
-      <member refid="class_biorth_1a83c4824d7003048794102f54152cfdbc" prot="public" virt="virtual"><scope>HQSphere</scope><name>~Biorth</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_halo_bulge.xml b/doxyxml/class_halo_bulge.xml
deleted file mode 100644
index 14bab95..0000000
--- a/doxyxml/class_halo_bulge.xml
+++ /dev/null
@@ -1,453 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_halo_bulge" kind="class" language="C++" prot="public">
-    <compoundname>HaloBulge</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_halo_bulge_8_h" local="no">HaloBulge.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_halo_bulge_1a90a84481273d756d0708ad7f6bcf669d" prot="private" static="no" mutable="no">
-        <type><ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref></type>
-        <definition>AxiSymModPtr HaloBulge::bmodel</definition>
-        <argsstring></argsstring>
-        <name>bmodel</name>
-        <qualifiedname>HaloBulge::bmodel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="40" column="22" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="40" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1ada8942616fa582437aa460854278d5c6" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int HaloBulge::HMODEL</definition>
-        <argsstring></argsstring>
-        <name>HMODEL</name>
-        <qualifiedname>HaloBulge::HMODEL</qualifiedname>
-        <briefdescription>
-<para>Halo model type (default: file) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="18" column="7" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1a3cbd78f4e2afef8acd0964d53ba38061" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string HaloBulge::INFILE</definition>
-        <argsstring></argsstring>
-        <name>INFILE</name>
-        <qualifiedname>HaloBulge::INFILE</qualifiedname>
-        <briefdescription>
-<para>Halo model file (default: w05) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="20" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1ab4c6d7045f053bda8cd90f7cc410ee35" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HaloBulge::MBULGE</definition>
-        <argsstring></argsstring>
-        <name>MBULGE</name>
-        <qualifiedname>HaloBulge::MBULGE</qualifiedname>
-        <briefdescription>
-<para>Bulge mass scale factor (default: 1.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="32" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1a72f9de577e906e8a75c0c62b8eeab794" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HaloBulge::MHALO</definition>
-        <argsstring></argsstring>
-        <name>MHALO</name>
-        <qualifiedname>HaloBulge::MHALO</qualifiedname>
-        <briefdescription>
-<para>Halo mass scale factor (default: 1.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1adeced051753a100bd475baac024e635c" prot="private" static="no" mutable="no">
-        <type><ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref></type>
-        <definition>AxiSymModPtr HaloBulge::model</definition>
-        <argsstring></argsstring>
-        <name>model</name>
-        <qualifiedname>HaloBulge::model</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="40" column="16" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="40" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1a92778988c013f3ec28a86c454de3e7ad" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HaloBulge::RBCORE</definition>
-        <argsstring></argsstring>
-        <name>RBCORE</name>
-        <qualifiedname>HaloBulge::RBCORE</qualifiedname>
-        <briefdescription>
-<para>Bulge core/scale size (default: 1.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="30" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1a320ce7e685727d08b366532f5f8bc986" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HaloBulge::RBMOD</definition>
-        <argsstring></argsstring>
-        <name>RBMOD</name>
-        <qualifiedname>HaloBulge::RBMOD</qualifiedname>
-        <briefdescription>
-<para>Bulge maximum model radius (default: 20.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="38" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1a27d88fd0efa04717f6d10acc06108cfa" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HaloBulge::RBMODMIN</definition>
-        <argsstring></argsstring>
-        <name>RBMODMIN</name>
-        <qualifiedname>HaloBulge::RBMODMIN</qualifiedname>
-        <briefdescription>
-<para>Bulge miniimum model radius (default: 1.0e-3) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="36" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1a67fd8c4790fcd95502c75d77f503e976" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HaloBulge::RBULGE</definition>
-        <argsstring></argsstring>
-        <name>RBULGE</name>
-        <qualifiedname>HaloBulge::RBULGE</qualifiedname>
-        <briefdescription>
-<para>Bulge radius scale factor (default: 1.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="34" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1a3a716b8c8b3e9323bfb8ac4627d626d8" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HaloBulge::RHALO</definition>
-        <argsstring></argsstring>
-        <name>RHALO</name>
-        <qualifiedname>HaloBulge::RHALO</qualifiedname>
-        <briefdescription>
-<para>Halo radius scale factor (default: 1.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="24" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="24" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_halo_bulge_1acb608daa85cb5b53ffdab983b828b447" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HaloBulge::RMOD</definition>
-        <argsstring></argsstring>
-        <name>RMOD</name>
-        <qualifiedname>HaloBulge::RMOD</qualifiedname>
-        <briefdescription>
-<para>Halo maximum model radius (default: 20.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="28" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="28" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double HaloBulge::RMODMIN</definition>
-        <argsstring></argsstring>
-        <name>RMODMIN</name>
-        <qualifiedname>HaloBulge::RMODMIN</qualifiedname>
-        <briefdescription>
-<para>Halo minimum model radius (default: 1.0e-3) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="26" column="10" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="26" bodyend="-1"/>
-      </memberdef>
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-      <memberdef kind="variable" id="class_halo_bulge_1a3b126171050302b5465d34066b10a926" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; HaloBulge::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>HaloBulge::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="45" column="25" bodyfile="/home/weinberg/Projects/EXP/src/HaloBulge.H" bodystart="45" bodyend="-1"/>
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-        <type>void *</type>
-        <definition>void * HaloBulge::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>HaloBulge::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_external_force_1ae23fdc9cb99c6c1f8884b518659bfc5a">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="42" column="9"/>
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-        <type>void</type>
-        <definition>void HaloBulge::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>HaloBulge::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="15" column="8"/>
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-        <type></type>
-        <definition>HaloBulge::HaloBulge</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>HaloBulge</name>
-        <qualifiedname>HaloBulge::HaloBulge</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
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-        <location file="/home/weinberg/Projects/EXP/src/HaloBulge.H" line="50" column="3"/>
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-<para>Compute halo + bulge external force. </para>
-    </briefdescription>
-    <detaileddescription>
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diff --git a/doxyxml/class_hankel_transform.xml b/doxyxml/class_hankel_transform.xml
deleted file mode 100644
index 634099d..0000000
--- a/doxyxml/class_hankel_transform.xml
+++ /dev/null
@@ -1,362 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_hankel_transform" kind="class" language="C++" prot="public">
-    <compoundname>HankelTransform</compoundname>
-    <includes refid="_hankel_8_h" local="no">Hankel.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_hankel_transform_1ab359a91eb57d5fd670f9aa5fb14d4ce0" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HankelTransform::h</definition>
-        <argsstring></argsstring>
-        <name>h</name>
-        <qualifiedname>HankelTransform::h</qualifiedname>
-        <briefdescription>
-<para>the h scaling value for the Ogata mapping </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="22" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hankel_transform_1a69aad2b661c8e674140f00a522a6caf4" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool HankelTransform::mapped</definition>
-        <argsstring></argsstring>
-        <name>mapped</name>
-        <qualifiedname>HankelTransform::mapped</qualifiedname>
-        <briefdescription>
-<para>True for mapping transformation algorithm (default) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="41" column="8" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="41" bodyend="-1"/>
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-      </memberdef>
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-        <type>int</type>
-        <definition>int HankelTransform::N</definition>
-        <argsstring></argsstring>
-        <name>N</name>
-        <qualifiedname>HankelTransform::N</qualifiedname>
-        <briefdescription>
-<para>N is number of function calls. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="28" column="7" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="28" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hankel_transform_1aa6243f1eb581786e4478ef01f95b53f3" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HankelTransform::nu</definition>
-        <argsstring></argsstring>
-        <name>nu</name>
-        <qualifiedname>HankelTransform::nu</qualifiedname>
-        <briefdescription>
-<para>nu is <ref refid="class_bessel" kindref="compound">Bessel</ref> function order </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="25" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="25" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_hankel_transform_1a427005971616b06084fff1a1698a37a1" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; HankelTransform::w</definition>
-        <argsstring></argsstring>
-        <name>w</name>
-        <qualifiedname>HankelTransform::w</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Ogata weights; <ref refid="class_bessel" kindref="compound">Bessel</ref> functions of the second kind divided by the first kind for nu+1 evaluated at the zeros </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="38" column="15" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_hankel_transform_1a59f329ce5beef5e7ae53a2f52b3e50a6" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; HankelTransform::xi</definition>
-        <argsstring></argsstring>
-        <name>xi</name>
-        <qualifiedname>HankelTransform::xi</qualifiedname>
-        <briefdescription>
-<para>Zeros divided by 2*pi for Ogata. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="34" column="15" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_hankel_transform_1af7d9913fea57760feed87d34677a4eb2" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; HankelTransform::zeros</definition>
-        <argsstring></argsstring>
-        <name>zeros</name>
-        <qualifiedname>HankelTransform::zeros</qualifiedname>
-        <briefdescription>
-<para>Will contain the zeros of the <ref refid="class_bessel" kindref="compound">Bessel</ref> function of order nu. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="31" column="15" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_hankel_transform_1a688a4e0f00374019e4125cc28ec80f1e" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double HankelTransform::fk_trans</definition>
-        <argsstring>(double x, std::function&lt; double(double) &gt; f, double q)</argsstring>
-        <name>fk_trans</name>
-        <qualifiedname>HankelTransform::fk_trans</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>std::function&lt; double(double) &gt;</type>
-          <declname>f</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>q</declname>
-        </param>
-        <briefdescription>
-<para>Variable change. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="52" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="52" bodyend="55"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hankel_transform_1aaceb9807809a2f6da791dc9c2d1c8f4b" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double HankelTransform::get_psi</definition>
-        <argsstring>(double t)</argsstring>
-        <name>get_psi</name>
-        <qualifiedname>HankelTransform::get_psi</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
-        </param>
-        <briefdescription>
-<para>Ogata mapping formula. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="58" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hankel_transform_1adee592ec7efbe2e3a76382b7ffd9ce70" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double HankelTransform::get_psip</definition>
-        <argsstring>(double t)</argsstring>
-        <name>get_psip</name>
-        <qualifiedname>HankelTransform::get_psip</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
-        </param>
-        <briefdescription>
-<para>Derivative of the Ogata mapping formula. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="61" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hankel_transform_1a8d4b9b4e591eae36ba122056f71223d5" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double HankelTransform::ogata_linear</definition>
-        <argsstring>(std::function&lt; double(double) &gt; f, double q, double h)</argsstring>
-        <name>ogata_linear</name>
-        <qualifiedname>HankelTransform::ogata_linear</qualifiedname>
-        <param>
-          <type>std::function&lt; double(double) &gt;</type>
-          <declname>f</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>q</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>h</declname>
-        </param>
-        <briefdescription>
-<para>The unmapped algorithm. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="48" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hankel_transform_1a6961f6f7be9c45d8170064fc54b1192e" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double HankelTransform::ogata_transformed</definition>
-        <argsstring>(std::function&lt; double(double) &gt; f, double q, double h)</argsstring>
-        <name>ogata_transformed</name>
-        <qualifiedname>HankelTransform::ogata_transformed</qualifiedname>
-        <param>
-          <type>std::function&lt; double(double) &gt;</type>
-          <declname>f</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>q</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>h</declname>
-        </param>
-        <briefdescription>
-<para>The mapping transformation algorithm (default) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="44" column="10"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_hankel_transform_1a36af720baefccd320de3e3d131b386da" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>HankelTransform::HankelTransform</definition>
-        <argsstring>()</argsstring>
-        <name>HankelTransform</name>
-        <qualifiedname>HankelTransform::HankelTransform</qualifiedname>
-        <briefdescription>
-<para>Null constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="65" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="65" bodyend="65"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hankel_transform_1a2a498c9425c3d83f95f8dfcdc8e9d766" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>HankelTransform::HankelTransform</definition>
-        <argsstring>(double h, double nu, int N=20)</argsstring>
-        <name>HankelTransform</name>
-        <qualifiedname>HankelTransform::HankelTransform</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>h</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>nu</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-          <defval>20</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="68" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hankel_transform_1acdaeb5f4ad367307755aa02932bb7da4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double HankelTransform::operator()</definition>
-        <argsstring>(std::function&lt; double(double) &gt; f, double q)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>HankelTransform::operator()</qualifiedname>
-        <param>
-          <type>std::function&lt; double(double) &gt;</type>
-          <declname>f</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>q</declname>
-        </param>
-        <briefdescription>
-<para>Perform the transform F(q)=int(f(x)*Jn(x*q)) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="74" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hankel_transform_1ab965fa2aa4e438a7a4317f1aa5a86de2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void HankelTransform::setLinear</definition>
-        <argsstring>()</argsstring>
-        <name>setLinear</name>
-        <qualifiedname>HankelTransform::setLinear</qualifiedname>
-        <briefdescription>
-<para>Set to unmapped Ogata formula. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="77" column="8" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="77" bodyend="77"/>
-        <references refid="class_hankel_transform_1a69aad2b661c8e674140f00a522a6caf4" compoundref="_hankel_8_h" startline="41">mapped</references>
-      </memberdef>
-      <memberdef kind="function" id="class_hankel_transform_1a7f7fa97e8cd6f923e92fe72a2d290512" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>HankelTransform::~HankelTransform</definition>
-        <argsstring>()</argsstring>
-        <name>~HankelTransform</name>
-        <qualifiedname>HankelTransform::~HankelTransform</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="71" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="71" bodyend="71"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Hankel transform based on the Ogata quadrature formulae from:</para>
-<para>Ogata, H, 2005, &quot;A Numerical Integration Formula Based on the
-Bessel Functions&quot;, Publ. Res. Inst. Math. Sci. 41 (4) (2005) 949–970. </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/Hankel.H" line="18" column="1" bodyfile="/home/weinberg/Projects/EXP/include/Hankel.H" bodystart="19" bodyend="79"/>
-    <listofallmembers>
-      <member refid="class_hankel_transform_1a688a4e0f00374019e4125cc28ec80f1e" prot="private" virt="non-virtual"><scope>HankelTransform</scope><name>fk_trans</name></member>
-      <member refid="class_hankel_transform_1aaceb9807809a2f6da791dc9c2d1c8f4b" prot="private" virt="non-virtual"><scope>HankelTransform</scope><name>get_psi</name></member>
-      <member refid="class_hankel_transform_1adee592ec7efbe2e3a76382b7ffd9ce70" prot="private" virt="non-virtual"><scope>HankelTransform</scope><name>get_psip</name></member>
-      <member refid="class_hankel_transform_1ab359a91eb57d5fd670f9aa5fb14d4ce0" prot="private" virt="non-virtual"><scope>HankelTransform</scope><name>h</name></member>
-      <member refid="class_hankel_transform_1a36af720baefccd320de3e3d131b386da" prot="public" virt="non-virtual"><scope>HankelTransform</scope><name>HankelTransform</name></member>
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-      <member refid="class_hankel_transform_1a69aad2b661c8e674140f00a522a6caf4" prot="private" virt="non-virtual"><scope>HankelTransform</scope><name>mapped</name></member>
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-      <member refid="class_hankel_transform_1a8d4b9b4e591eae36ba122056f71223d5" prot="private" virt="non-virtual"><scope>HankelTransform</scope><name>ogata_linear</name></member>
-      <member refid="class_hankel_transform_1a6961f6f7be9c45d8170064fc54b1192e" prot="private" virt="non-virtual"><scope>HankelTransform</scope><name>ogata_transformed</name></member>
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-      <member refid="class_hankel_transform_1a427005971616b06084fff1a1698a37a1" prot="private" virt="non-virtual"><scope>HankelTransform</scope><name>w</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_herm_quad.xml b/doxyxml/class_herm_quad.xml
deleted file mode 100644
index 221dd76..0000000
--- a/doxyxml/class_herm_quad.xml
+++ /dev/null
@@ -1,81 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_herm_quad" kind="class" language="C++" prot="public">
-    <compoundname>HermQuad</compoundname>
-    <basecompoundref refid="class_gauss_quad" prot="public" virt="non-virtual">GaussQuad</basecompoundref>
-    <includes refid="gauss_q_8_h" local="no">gaussQ.H</includes>
-    <sectiondef kind="public-func">
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-        <type></type>
-        <definition>HermQuad::HermQuad</definition>
-        <argsstring>(int N=10, double ALPHA=0.0)</argsstring>
-        <name>HermQuad</name>
-        <qualifiedname>HermQuad::HermQuad</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-          <defval>10</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ALPHA</declname>
-          <defval>0.0</defval>
-        </param>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/gaussQ.H" line="89" column="3"/>
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-    <detaileddescription>
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-        <label>GaussQuad</label>
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-        <label>HermQuad</label>
-        <link refid="class_herm_quad"/>
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-        </childnode>
-      </node>
-    </inheritancegraph>
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-      <node id="2">
-        <label>GaussQuad</label>
-        <link refid="class_gauss_quad"/>
-      </node>
-      <node id="1">
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-    <location file="/home/weinberg/Projects/EXP/include/gaussQ.H" line="86" column="1" bodyfile="/home/weinberg/Projects/EXP/include/gaussQ.H" bodystart="87" bodyend="90"/>
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-      <member refid="class_gauss_quad_1a2d164fe57b165dcd45a3f9ad4b102903" prot="public" virt="non-virtual"><scope>HermQuad</scope><name>GaussQuad</name></member>
-      <member refid="class_gauss_quad_1ad0ff3faadab8afbd0ff35111a02938dc" prot="public" virt="non-virtual"><scope>HermQuad</scope><name>get_alpha</name></member>
-      <member refid="class_gauss_quad_1a647dda30c76a016d266d6ccc83ae79a7" prot="public" virt="non-virtual"><scope>HermQuad</scope><name>get_beta</name></member>
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-      <member refid="class_herm_quad_1a57421fe7c96898260f3b384843797cd6" prot="public" virt="non-virtual"><scope>HermQuad</scope><name>HermQuad</name></member>
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-</doxygen>
diff --git a/doxyxml/class_hermite.xml b/doxyxml/class_hermite.xml
deleted file mode 100644
index 99c45db..0000000
--- a/doxyxml/class_hermite.xml
+++ /dev/null
@@ -1,230 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_hermite" kind="class" language="C++" prot="public">
-    <compoundname>Hermite</compoundname>
-    <basecompoundref refid="class_ortho_poly" prot="public" virt="non-virtual">OrthoPoly</basecompoundref>
-    <includes refid="_ortho_poly_8_h" local="no">OrthoPoly.H</includes>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_hermite_1a20584862f32b4dc3cea3a7ad8ca5aad8" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Hermite::coef1</definition>
-        <argsstring>(const int n)</argsstring>
-        <name>coef1</name>
-        <qualifiedname>Hermite::coef1</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a8691a2e79b7d678a2f33c295a230ce48">coef1</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="195" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="195" bodyend="195"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hermite_1a2d8ad699c5c538c2b8d86bc564db4767" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Hermite::coef2</definition>
-        <argsstring>(const int n)</argsstring>
-        <name>coef2</name>
-        <qualifiedname>Hermite::coef2</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a074c75f7b1758471d5ca9e0c9556adc7">coef2</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="196" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="196" bodyend="196"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hermite_1a811b64bf95278e44cedafe8ff7034842" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Hermite::coef3</definition>
-        <argsstring>(const int n)</argsstring>
-        <name>coef3</name>
-        <qualifiedname>Hermite::coef3</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a5a1ad9977808f1a4503ccde47b260b57">coef3</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="197" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="197" bodyend="197"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hermite_1a91b9ce2aee7da32a99010969f91f17e0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Hermite::coef4</definition>
-        <argsstring>(const int n)</argsstring>
-        <name>coef4</name>
-        <qualifiedname>Hermite::coef4</qualifiedname>
-        <reimplements refid="class_ortho_poly_1aa86a42c4a207651a43822242d198725b">coef4</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="198" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="198" bodyend="198"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hermite_1aa1996089eb7171792d8d7083fd643e8e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Hermite::f0</definition>
-        <argsstring>(const double x)</argsstring>
-        <name>f0</name>
-        <qualifiedname>Hermite::f0</qualifiedname>
-        <reimplements refid="class_ortho_poly_1afaaab0fc6afe43bc01271a549adfc96f">f0</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="200" column="17" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="200" bodyend="200"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hermite_1a83fa92a38f026b34788778489d83ed72" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Hermite::f1</definition>
-        <argsstring>(const double x)</argsstring>
-        <name>f1</name>
-        <qualifiedname>Hermite::f1</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a9e16af920759d1d259e492fab6c79100">f1</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="201" column="17" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="201" bodyend="201"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hermite_1af5882ed3ef371ac816f721a4d5dbcced" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Hermite::h</definition>
-        <argsstring>(const int n)</argsstring>
-        <name>h</name>
-        <qualifiedname>Hermite::h</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a012dedf1c757a8ac3c999f2c6c2c6b05">h</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="193" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="193" bodyend="193"/>
-      </memberdef>
-      <memberdef kind="function" id="class_hermite_1a65f7a86f19d866306d86c4dd26124dfa" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>Hermite::Hermite</definition>
-        <argsstring>(void)</argsstring>
-        <name>Hermite</name>
-        <qualifiedname>Hermite::Hermite</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="186" column="3" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="186" bodyend="190"/>
-        <references refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" compoundref="_ortho_poly_8_h" startline="19">OrthoPoly::a</references>
-        <references refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" compoundref="_ortho_poly_8_h" startline="20">OrthoPoly::b</references>
-        <references refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" compoundref="_ortho_poly_8_h" startline="22">OrthoPoly::param</references>
-      </memberdef>
-      <memberdef kind="function" id="class_hermite_1a6d33ef9a7642dae5a29263e2de346669" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Hermite::w</definition>
-        <argsstring>(const double x)</argsstring>
-        <name>w</name>
-        <qualifiedname>Hermite::w</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a789ce34b2842e2ddf958e0af56cdc4e6">w</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="192" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="192" bodyend="192"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>Hermite</label>
-        <link refid="class_hermite"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>Hermite</label>
-        <link refid="class_hermite"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="182" column="1" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="183" bodyend="203"/>
-    <listofallmembers>
-      <member refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" prot="protected" virt="non-virtual"><scope>Hermite</scope><name>a</name></member>
-      <member refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" prot="protected" virt="non-virtual"><scope>Hermite</scope><name>b</name></member>
-      <member refid="class_hermite_1a20584862f32b4dc3cea3a7ad8ca5aad8" prot="public" virt="virtual"><scope>Hermite</scope><name>coef1</name></member>
-      <member refid="class_hermite_1a2d8ad699c5c538c2b8d86bc564db4767" prot="public" virt="virtual"><scope>Hermite</scope><name>coef2</name></member>
-      <member refid="class_hermite_1a811b64bf95278e44cedafe8ff7034842" prot="public" virt="virtual"><scope>Hermite</scope><name>coef3</name></member>
-      <member refid="class_hermite_1a91b9ce2aee7da32a99010969f91f17e0" prot="public" virt="virtual"><scope>Hermite</scope><name>coef4</name></member>
-      <member refid="class_ortho_poly_1a2477962944125247f6bb446ba361afaa" prot="private" virt="non-virtual"><scope>Hermite</scope><name>coefs</name></member>
-      <member refid="class_ortho_poly_1afe8111b9a2946e381e7283a8e06da3b8" prot="public" virt="non-virtual"><scope>Hermite</scope><name>f</name></member>
-      <member refid="class_hermite_1aa1996089eb7171792d8d7083fd643e8e" prot="public" virt="virtual"><scope>Hermite</scope><name>f0</name></member>
-      <member refid="class_hermite_1a83fa92a38f026b34788778489d83ed72" prot="public" virt="virtual"><scope>Hermite</scope><name>f1</name></member>
-      <member refid="class_ortho_poly_1aed2903244bcd8423c11ddb3343f701c0" prot="public" virt="non-virtual"><scope>Hermite</scope><name>fv</name></member>
-      <member refid="class_ortho_poly_1a954a4941a43f355ddb7e17185eca5052" prot="public" virt="non-virtual"><scope>Hermite</scope><name>get_a</name></member>
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-      <member refid="class_hermite_1a65f7a86f19d866306d86c4dd26124dfa" prot="public" virt="non-virtual"><scope>Hermite</scope><name>Hermite</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_hernquist.xml b/doxyxml/class_hernquist.xml
deleted file mode 100644
index 5f57cfa..0000000
--- a/doxyxml/class_hernquist.xml
+++ /dev/null
@@ -1,149 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_hernquist" kind="class" language="C++" prot="public">
-    <compoundname>Hernquist</compoundname>
-    <includes refid="models_8_h" local="no">models.H</includes>
-    <sectiondef kind="protected-attrib">
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-        <argsstring></argsstring>
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-        <qualifiedname>Hernquist::G</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="75" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="75" bodyend="-1"/>
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-        <qualifiedname>Hernquist::r0</qualifiedname>
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-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Hernquist::force</definition>
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diff --git a/doxyxml/class_hernquist_sphere.xml b/doxyxml/class_hernquist_sphere.xml
deleted file mode 100644
index 1f50e5f..0000000
--- a/doxyxml/class_hernquist_sphere.xml
+++ /dev/null
@@ -1,559 +0,0 @@
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diff --git a/doxyxml/class_hunter_disk.xml b/doxyxml/class_hunter_disk.xml
deleted file mode 100644
index c6d19f3..0000000
--- a/doxyxml/class_hunter_disk.xml
+++ /dev/null
@@ -1,1136 +0,0 @@
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-      <memberdef kind="variable" id="class_hunter_disk_1ade5637c7bd38f07cfd076ec3bb5157cf" prot="private" static="no" mutable="no">
-        <type>Vector</type>
-        <definition>Vector HunterDisk::gam</definition>
-        <argsstring></argsstring>
-        <name>gam</name>
-        <qualifiedname>HunterDisk::gam</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="19" column="10" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="19" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a363cd7b6341774439c02513885fb1e40" prot="private" static="no" mutable="no">
-        <type>Logic</type>
-        <definition>Logic HunterDisk::hankel_setup</definition>
-        <argsstring></argsstring>
-        <name>hankel_setup</name>
-        <qualifiedname>HunterDisk::hankel_setup</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="32" column="9" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="32" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a47198276536f12718495b2547e045385" prot="private" static="no" mutable="no">
-        <type>Vector</type>
-        <definition>Vector HunterDisk::K</definition>
-        <argsstring></argsstring>
-        <name>K</name>
-        <qualifiedname>HunterDisk::K</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="33" column="14" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="33" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a88454d3b998edb9c198abb3e16ac3e5e" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::kfac</definition>
-        <argsstring></argsstring>
-        <name>kfac</name>
-        <qualifiedname>HunterDisk::kfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="17" column="26" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="17" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a8c56957216bf9ca56efe91e375d1f2c1" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::kmax</definition>
-        <argsstring></argsstring>
-        <name>kmax</name>
-        <qualifiedname>HunterDisk::kmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="34" column="10" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="34" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1ad15ebfaf68f042d8af7f372b42821203" prot="private" static="no" mutable="no">
-        <type>Vector</type>
-        <definition>Vector HunterDisk::m_mass</definition>
-        <argsstring></argsstring>
-        <name>m_mass</name>
-        <qualifiedname>HunterDisk::m_mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="30" column="17" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="30" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a70eb6b3d3d47eb2bbcaeffd2f0563489" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>HunterDisk::mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="16" column="15" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="16" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1aa8c7bd3888aaf6c8848490cd28a40b7f" prot="private" static="no" mutable="no">
-        <type>Logic</type>
-        <definition>Logic HunterDisk::mass_setup</definition>
-        <argsstring></argsstring>
-        <name>mass_setup</name>
-        <qualifiedname>HunterDisk::mass_setup</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="27" column="9" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="27" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a1b362f6d37cb2738b508366161046af6" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int HunterDisk::mgrid</definition>
-        <argsstring></argsstring>
-        <name>mgrid</name>
-        <qualifiedname>HunterDisk::mgrid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="29" column="7" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="29" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a24a0924957dad7e0c0f88c2f07d0895f" prot="private" static="no" mutable="no">
-        <type>Logic</type>
-        <definition>Logic HunterDisk::model_setup</definition>
-        <argsstring></argsstring>
-        <name>model_setup</name>
-        <qualifiedname>HunterDisk::model_setup</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="21" column="9" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="21" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1afff8fe078ebf1d8711614ec4f7ef0014" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int HunterDisk::n</definition>
-        <argsstring></argsstring>
-        <name>n</name>
-        <qualifiedname>HunterDisk::n</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="15" column="7" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="15" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a1980d397e8f328316e23d08e7348e212" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int HunterDisk::nhank</definition>
-        <argsstring></argsstring>
-        <name>nhank</name>
-        <qualifiedname>HunterDisk::nhank</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="35" column="8" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="35" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a3daf9fabb6eeb29fe19b441061b4f29e" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int HunterDisk::nint</definition>
-        <argsstring></argsstring>
-        <name>nint</name>
-        <qualifiedname>HunterDisk::nint</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="23" column="7" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="23" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1aa5c2e4339ea330b5eb5be02f6c4693ae" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::offset_dp</definition>
-        <argsstring></argsstring>
-        <name>offset_dp</name>
-        <qualifiedname>HunterDisk::offset_dp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="40" column="10" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="40" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a03f1f7db82b82043935dc35dbbf05709" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::offset_dp2</definition>
-        <argsstring></argsstring>
-        <name>offset_dp2</name>
-        <qualifiedname>HunterDisk::offset_dp2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="41" column="10" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="41" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1ab6161283ab6067e78523cb3ce45120d4" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::offset_p</definition>
-        <argsstring></argsstring>
-        <name>offset_p</name>
-        <qualifiedname>HunterDisk::offset_p</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="39" column="10" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="39" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a38a02ba1ecec55948df5849f0ebade11" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::omfac</definition>
-        <argsstring></argsstring>
-        <name>omfac</name>
-        <qualifiedname>HunterDisk::omfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="17" column="15" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="17" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1a7a08c35750e9e390621f30ffe62c6ae8" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::pfac</definition>
-        <argsstring></argsstring>
-        <name>pfac</name>
-        <qualifiedname>HunterDisk::pfac</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="17" column="21" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="17" bodyend="-1"/>
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-        <type>Vector</type>
-        <definition>Vector HunterDisk::r_mass</definition>
-        <argsstring></argsstring>
-        <name>r_mass</name>
-        <qualifiedname>HunterDisk::r_mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="30" column="10" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="30" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_hunter_disk_1abf01ce72bdade42bbe5eaee91d817d98" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double HunterDisk::rcut</definition>
-        <argsstring></argsstring>
-        <name>rcut</name>
-        <qualifiedname>HunterDisk::rcut</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="16" column="20" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="16" bodyend="-1"/>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>HunterDisk::rmax</qualifiedname>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="16" column="10" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="16" bodyend="-1"/>
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-        <type>Vector</type>
-        <definition>Vector HunterDisk::S_K</definition>
-        <argsstring></argsstring>
-        <name>S_K</name>
-        <qualifiedname>HunterDisk::S_K</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/hunter.H" line="33" column="10" bodyfile="/home/weinberg/Projects/EXP/include/hunter.H" bodystart="33" bodyend="-1"/>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>sfac</name>
-        <qualifiedname>HunterDisk::sfac</qualifiedname>
-        <briefdescription>
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-        <definition>const double HunterDisk::defKMAX</definition>
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-        <name>defKMAX</name>
-        <qualifiedname>HunterDisk::defKMAX</qualifiedname>
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-        <name>defMGRID</name>
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-        <definition>const int HunterDisk::defNHANK</definition>
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-        <name>defNHANK</name>
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-        <name>defNINT</name>
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-        <name>defRCUT</name>
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-        <qualifiedname>HunterDisk::d2vplgndr</qualifiedname>
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-        <definition>Vector HunterDisk::dvplgndr</definition>
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-        <name>dvplgndr</name>
-        <qualifiedname>HunterDisk::dvplgndr</qualifiedname>
-        <param>
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-        <qualifiedname>HunterDisk::setup_mass</qualifiedname>
-        <param>
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-        <qualifiedname>HunterDisk::setup_model</qualifiedname>
-        <param>
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-        <type>void</type>
-        <definition>void HunterDisk::tabulate_hankel</definition>
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-        <name>tabulate_hankel</name>
-        <qualifiedname>HunterDisk::tabulate_hankel</qualifiedname>
-        <param>
-          <type>void</type>
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-        </briefdescription>
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-        <type>Vector</type>
-        <definition>Vector HunterDisk::vplgndr</definition>
-        <argsstring>(double)</argsstring>
-        <name>vplgndr</name>
-        <qualifiedname>HunterDisk::vplgndr</qualifiedname>
-        <param>
-          <type>double</type>
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-        <type>double</type>
-        <definition>double HunterDisk::d2fde2</definition>
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-        <name>d2fde2</name>
-        <qualifiedname>HunterDisk::d2fde2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a12d39568c81a72b9e3ea2277816d05f9">d2fde2</reimplements>
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-          <type>double</type>
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-          <type>double</type>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double HunterDisk::dfde</definition>
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-        <name>dfde</name>
-        <qualifiedname>HunterDisk::dfde</qualifiedname>
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-        <param>
-          <type>double</type>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double HunterDisk::dfdl</definition>
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-        <name>dfdl</name>
-        <qualifiedname>HunterDisk::dfdl</qualifiedname>
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-          <type>double</type>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double HunterDisk::distf</definition>
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-        <name>distf</name>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double HunterDisk::get_density</definition>
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-        <name>get_density</name>
-        <qualifiedname>HunterDisk::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</reimplements>
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-        <type>double</type>
-        <definition>double HunterDisk::get_dpot</definition>
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-        <param>
-          <type>const double</type>
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-        <type>double</type>
-        <definition>double HunterDisk::get_dpot</definition>
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-          <type>const double</type>
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-        <param>
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-        <type>double</type>
-        <definition>double HunterDisk::get_dpot2</definition>
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-        <name>get_dpot2</name>
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-        <type>double</type>
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-        <type>double</type>
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-        <param>
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-        <briefdescription>
-<para>Access the profile. </para>
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-        <type>double</type>
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-        <type>double</type>
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-        <type>double</type>
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-        <type>double</type>
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diff --git a/doxyxml/class_hunter_disk_x.xml b/doxyxml/class_hunter_disk_x.xml
deleted file mode 100644
index 32219fc..0000000
--- a/doxyxml/class_hunter_disk_x.xml
+++ /dev/null
@@ -1,669 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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-  <compounddef id="class_hunter_disk_x" kind="class" language="C++" prot="public">
-    <compoundname>HunterDiskX</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
-    <includes refid="_hunter_x_8_h" local="no">HunterX.H</includes>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
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diff --git a/doxyxml/class_icont.xml b/doxyxml/class_icont.xml
deleted file mode 100644
index b75d8a8..0000000
--- a/doxyxml/class_icont.xml
+++ /dev/null
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-    </briefdescription>
-    <detaileddescription>
-<para>This does the same thing as the non-invasive templates above using inheritance to wrap the container </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>C&lt; K, V, Args... &gt;</label>
-      </node>
-      <node id="1">
-        <label>Icont&lt; C, K, V, Args &gt;</label>
-        <link refid="class_icont"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>C&lt; K, V, Args... &gt;</label>
-      </node>
-      <node id="1">
-        <label>Icont&lt; C, K, V, Args &gt;</label>
-        <link refid="class_icont"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/InitContainer.H" line="46" column="1" bodyfile="/home/weinberg/Projects/EXP/include/InitContainer.H" bodystart="47" bodyend="65"/>
-    <listofallmembers>
-      <member refid="class_icont_1a95419daaf624c5690c7e6383b17a81bb" prot="public" virt="virtual"><scope>Icont</scope><name>Default</name></member>
-      <member refid="class_icont_1a65ba76160892e686d56ca9c5d005607a" prot="public" virt="non-virtual"><scope>Icont</scope><name>operator[]</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_info.xml b/doxyxml/class_info.xml
deleted file mode 100644
index 71fc066..0000000
--- a/doxyxml/class_info.xml
+++ /dev/null
@@ -1,294 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_info" kind="class" language="C++" prot="public">
-    <compoundname>Info</compoundname>
-    <includes refid="_barrier_wrapper_8_h" local="no">BarrierWrapper.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_info_1a8d42af920c76114214bfb64ef2d79de0" prot="private" static="no" mutable="no">
-        <type><ref refid="_barrier_wrapper_8_h_1ae26886b3fffa4f2f48b62705e6f3af3c" kindref="member">CharPtr</ref></type>
-        <definition>CharPtr Info::blob</definition>
-        <argsstring></argsstring>
-        <name>blob</name>
-        <qualifiedname>Info::blob</qualifiedname>
-        <briefdescription>
-<para>MPI buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="33" column="11" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_info_1a0101cb4e81e7be204cd1b014c240b81e" prot="private" static="no" mutable="no">
-        <type>size_t</type>
-        <definition>size_t Info::charsz</definition>
-        <argsstring></argsstring>
-        <name>charsz</name>
-        <qualifiedname>Info::charsz</qualifiedname>
-        <briefdescription>
-<para>Space for character string. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="39" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_info_1a922d16ed2424941f901d2b3d8cb9b283" prot="private" static="no" mutable="no">
-        <type>std::list&lt; <ref refid="_barrier_wrapper_8_h_1a6ec85faa38de1a08236705734b4e2b26" kindref="member">ReqPtr</ref> &gt;</type>
-        <definition>std::list&lt;ReqPtr&gt; Info::req</definition>
-        <argsstring></argsstring>
-        <name>req</name>
-        <qualifiedname>Info::req</qualifiedname>
-        <briefdescription>
-<para>Request handle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="30" column="13" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_info_1a7694b537bb903cb465713894055b0d40" prot="public" static="yes" mutable="no">
-        <type>const size_t</type>
-        <definition>const size_t Info::bufsz</definition>
-        <argsstring></argsstring>
-        <name>bufsz</name>
-        <qualifiedname>Info::bufsz</qualifiedname>
-        <initializer>= 512</initializer>
-        <briefdescription>
-<para>Buffer size (1 block) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="44" column="23" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_info_1a1424990335e09ca579fc999ac70bfd69" prot="public" static="yes" mutable="no">
-        <type>const int</type>
-        <definition>const int Info::tag</definition>
-        <argsstring></argsstring>
-        <name>tag</name>
-        <qualifiedname>Info::tag</qualifiedname>
-        <initializer>= 232395</initializer>
-        <briefdescription>
-<para>Tag. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="47" column="20" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="47" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_info_1ac8c0c94aaf9a9a216fa3c2656b09f075" prot="public" static="no" mutable="no">
-        <type><ref refid="_barrier_wrapper_8_h_1ae26886b3fffa4f2f48b62705e6f3af3c" kindref="member">CharPtr</ref></type>
-        <definition>CharPtr Info::c</definition>
-        <argsstring></argsstring>
-        <name>c</name>
-        <qualifiedname>Info::c</qualifiedname>
-        <briefdescription>
-<para>Character buffer for string. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="62" column="11" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="62" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_info_1adc9a2e7d96d6e60c0bc2168b40f10393" prot="public" static="no" mutable="no">
-        <type>time_t</type>
-        <definition>time_t Info::ctm</definition>
-        <argsstring></argsstring>
-        <name>ctm</name>
-        <qualifiedname>Info::ctm</qualifiedname>
-        <briefdescription>
-<para>Creation time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="53" column="10" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="53" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_info_1a29d7ba6e619944bb1f526f1dec716296" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Info::own</definition>
-        <argsstring></argsstring>
-        <name>own</name>
-        <qualifiedname>Info::own</qualifiedname>
-        <briefdescription>
-<para>Owning process. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="50" column="7" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="50" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_info_1a0865142009d602af1879c5da53b9e06d" prot="public" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string Info::s</definition>
-        <argsstring></argsstring>
-        <name>s</name>
-        <qualifiedname>Info::s</qualifiedname>
-        <briefdescription>
-<para>Label. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="59" column="15" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="59" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_info_1ac93c661ae1e603848b08a17d8b3a8425" prot="public" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned Info::siz</definition>
-        <argsstring></argsstring>
-        <name>siz</name>
-        <qualifiedname>Info::siz</qualifiedname>
-        <briefdescription>
-<para>Label size. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="56" column="12" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="56" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_info_1aed610960fd53086b4980108c4e55afde" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Info::pack</definition>
-        <argsstring>()</argsstring>
-        <name>pack</name>
-        <qualifiedname>Info::pack</qualifiedname>
-        <briefdescription>
-<para>Helper to translate buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="36" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_info_1a89823cdd427a9dfdf3d2e43d938222bd" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>Info::Info</definition>
-        <argsstring>()</argsstring>
-        <name>Info</name>
-        <qualifiedname>Info::Info</qualifiedname>
-        <briefdescription>
-<para>Null constructor for assignment. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="65" column="3" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="65" bodyend="65"/>
-      </memberdef>
-      <memberdef kind="function" id="class_info_1a070c079c7c2c7a737ed94a030510f695" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Info::Info</definition>
-        <argsstring>(CharPtr p)</argsstring>
-        <name>Info</name>
-        <qualifiedname>Info::Info</qualifiedname>
-        <param>
-          <type><ref refid="_barrier_wrapper_8_h_1ae26886b3fffa4f2f48b62705e6f3af3c" kindref="member">CharPtr</ref></type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Construct from MPI-passed char buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="68" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_info_1a7908d9cd4126d049c605fb578338b49d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Info::Info</definition>
-        <argsstring>(int own, time_t ctm, const std::string &amp;s)</argsstring>
-        <name>Info</name>
-        <qualifiedname>Info::Info</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>own</declname>
-        </param>
-        <param>
-          <type>time_t</type>
-          <declname>ctm</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>s</declname>
-        </param>
-        <briefdescription>
-<para>Full constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="71" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_info_1ac60d7e4961259f8ff1a0be85ae7c4f6b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Info::sendInfo</definition>
-        <argsstring>(int myid, MPI_Comm comm, int commsize)</argsstring>
-        <name>sendInfo</name>
-        <qualifiedname>Info::sendInfo</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>myid</declname>
-        </param>
-        <param>
-          <type>MPI_Comm</type>
-          <declname>comm</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>commsize</declname>
-        </param>
-        <briefdescription>
-<para>Send the <ref refid="class_info" kindref="compound">Info</ref> to all processes in the communicator. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="74" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" line="25" column="1" bodyfile="/home/weinberg/Projects/EXP/include/BarrierWrapper.H" bodystart="26" bodyend="76"/>
-    <listofallmembers>
-      <member refid="class_info_1a8d42af920c76114214bfb64ef2d79de0" prot="private" virt="non-virtual"><scope>Info</scope><name>blob</name></member>
-      <member refid="class_info_1a7694b537bb903cb465713894055b0d40" prot="public" virt="non-virtual"><scope>Info</scope><name>bufsz</name></member>
-      <member refid="class_info_1ac8c0c94aaf9a9a216fa3c2656b09f075" prot="public" virt="non-virtual"><scope>Info</scope><name>c</name></member>
-      <member refid="class_info_1a0101cb4e81e7be204cd1b014c240b81e" prot="private" virt="non-virtual"><scope>Info</scope><name>charsz</name></member>
-      <member refid="class_info_1adc9a2e7d96d6e60c0bc2168b40f10393" prot="public" virt="non-virtual"><scope>Info</scope><name>ctm</name></member>
-      <member refid="class_info_1a89823cdd427a9dfdf3d2e43d938222bd" prot="public" virt="non-virtual"><scope>Info</scope><name>Info</name></member>
-      <member refid="class_info_1a070c079c7c2c7a737ed94a030510f695" prot="public" virt="non-virtual"><scope>Info</scope><name>Info</name></member>
-      <member refid="class_info_1a7908d9cd4126d049c605fb578338b49d" prot="public" virt="non-virtual"><scope>Info</scope><name>Info</name></member>
-      <member refid="class_info_1a29d7ba6e619944bb1f526f1dec716296" prot="public" virt="non-virtual"><scope>Info</scope><name>own</name></member>
-      <member refid="class_info_1aed610960fd53086b4980108c4e55afde" prot="private" virt="non-virtual"><scope>Info</scope><name>pack</name></member>
-      <member refid="class_info_1a922d16ed2424941f901d2b3d8cb9b283" prot="private" virt="non-virtual"><scope>Info</scope><name>req</name></member>
-      <member refid="class_info_1a0865142009d602af1879c5da53b9e06d" prot="public" virt="non-virtual"><scope>Info</scope><name>s</name></member>
-      <member refid="class_info_1ac60d7e4961259f8ff1a0be85ae7c4f6b" prot="public" virt="non-virtual"><scope>Info</scope><name>sendInfo</name></member>
-      <member refid="class_info_1ac93c661ae1e603848b08a17d8b3a8425" prot="public" virt="non-virtual"><scope>Info</scope><name>siz</name></member>
-      <member refid="class_info_1a1424990335e09ca579fc999ac70bfd69" prot="public" virt="non-virtual"><scope>Info</scope><name>tag</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_interaction.xml b/doxyxml/class_interaction.xml
deleted file mode 100644
index d8abba0..0000000
--- a/doxyxml/class_interaction.xml
+++ /dev/null
@@ -1,132 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_interaction" kind="class" language="C++" prot="public">
-    <compoundname>Interaction</compoundname>
-    <includes refid="_component_container_8_h" local="no">ComponentContainer.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_interaction_1a5d543d957cf7194d20aa3c84d778bd6b" prot="public" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* Interaction::c</definition>
-        <argsstring></argsstring>
-        <name>c</name>
-        <qualifiedname>Interaction::c</qualifiedname>
-        <briefdescription>
-<para>Fiducial component with whom force interactions are desired. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ComponentContainer.H" line="31" column="13" bodyfile="/home/weinberg/Projects/EXP/src/ComponentContainer.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_interaction_1a5df46e19a029e2b51fbb9ac751d26b3b" prot="public" static="no" mutable="no">
-        <type>std::list&lt; <ref refid="class_component" kindref="compound">Component</ref> * &gt;</type>
-        <definition>std::list&lt;Component*&gt; Interaction::l</definition>
-        <argsstring></argsstring>
-        <name>l</name>
-        <qualifiedname>Interaction::l</qualifiedname>
-        <briefdescription>
-<para>List of components whose particles will feel the force from *c. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ComponentContainer.H" line="34" column="13" bodyfile="/home/weinberg/Projects/EXP/src/ComponentContainer.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_interaction_1a512b0ec7ece59741f315b5fbc0fcab74" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>Interaction::Interaction</definition>
-        <argsstring>(Component *c)</argsstring>
-        <name>Interaction</name>
-        <qualifiedname>Interaction::Interaction</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ComponentContainer.H" line="37" column="3" bodyfile="/home/weinberg/Projects/EXP/src/ComponentContainer.H" bodystart="37" bodyend="37"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Class to keep track of the interactions between components. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>Maintains a list of component that feel the force from the given component. Every pair of interactions must be explicitly be listed in the [interaction] stanza of the input file. Example: <linebreak/>
- <computeroutput> halo : disk </computeroutput> will tell the code to apply the force from halo particles on the disk particles. The fully self-consistent simulation with a <computeroutput>disk</computeroutput> and <computeroutput>halo</computeroutput> component would have the lines: <linebreak/>
- <computeroutput> halo : disk disk : halo </computeroutput> </para>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="2">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="6">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="1">
-        <label>Interaction</label>
-        <link refid="class_interaction"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>c</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="2" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
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diff --git a/doxyxml/class_internal_error.xml b/doxyxml/class_internal_error.xml
deleted file mode 100644
index 4dfce47..0000000
--- a/doxyxml/class_internal_error.xml
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@@ -1,145 +0,0 @@
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diff --git a/doxyxml/class_interp1d.xml b/doxyxml/class_interp1d.xml
deleted file mode 100644
index 40616d8..0000000
--- a/doxyxml/class_interp1d.xml
+++ /dev/null
@@ -1,142 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_interp1d" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>Interp1d</compoundname>
-    <derivedcompoundref refid="class_cheby1d" prot="public" virt="non-virtual">Cheby1d</derivedcompoundref>
-    <derivedcompoundref refid="class_linear1d" prot="public" virt="non-virtual">Linear1d</derivedcompoundref>
-    <derivedcompoundref refid="class_spline1d" prot="public" virt="non-virtual">Spline1d</derivedcompoundref>
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-        <type>double</type>
-        <definition>virtual double Interp1d::deriv</definition>
-        <argsstring>(const double &amp;x)=0</argsstring>
-        <name>deriv</name>
-        <qualifiedname>Interp1d::deriv</qualifiedname>
-        <reimplementedby refid="class_spline1d_1a27aa98f94472783eef5a68a005a79b16">deriv</reimplementedby>
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-        <definition>virtual double Interp1d::eval</definition>
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-        <qualifiedname>Interp1d::eval</qualifiedname>
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-        <briefdescription>
-<para>Evaluate the interpolant. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="47" column="18"/>
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-        <type>double</type>
-        <definition>virtual double Interp1d::xhi</definition>
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-        <qualifiedname>Interp1d::xhi</qualifiedname>
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-        <type>double</type>
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-        <name>xlo</name>
-        <qualifiedname>Interp1d::xlo</qualifiedname>
-        <reimplementedby refid="class_spline1d_1a604862983923c498185d9177d2b40d99">xlo</reimplementedby>
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-        <reimplementedby refid="class_linear1d_1a871aea7a921331a671183d361cd3b2e0">xlo</reimplementedby>
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-<para>Data limits. </para>
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-      <member refid="class_interp1d_1acb91fcf561ac596869ce571c30cf5583" prot="public" virt="pure-virtual"><scope>Interp1d</scope><name>eval</name></member>
-      <member refid="class_interp1d_1a7acc2957f6163115ad925d21d9ab2783" prot="public" virt="pure-virtual"><scope>Interp1d</scope><name>xhi</name></member>
-      <member refid="class_interp1d_1ad7d8aaee41f1df6e533bfbb3089e8b67" prot="public" virt="pure-virtual"><scope>Interp1d</scope><name>xlo</name></member>
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diff --git a/doxyxml/class_isothermal.xml b/doxyxml/class_isothermal.xml
deleted file mode 100644
index 60807fa..0000000
--- a/doxyxml/class_isothermal.xml
+++ /dev/null
@@ -1,128 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-        <type>Eigen::Vector3d</type>
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-        <name>potential</name>
-        <qualifiedname>Isothermal::potential</qualifiedname>
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-</doxygen>
diff --git a/doxyxml/class_isothermal_sphere.xml b/doxyxml/class_isothermal_sphere.xml
deleted file mode 100644
index 5f45eb5..0000000
--- a/doxyxml/class_isothermal_sphere.xml
+++ /dev/null
@@ -1,762 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <compoundname>IsothermalSphere</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
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-        <qualifiedname>IsothermalSphere::F</qualifiedname>
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-        <name>dfde</name>
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-        <references refid="class_isothermal_sphere_1a5f384f8c77a3f4c6120274eea376e76c" compoundref="isothermal_8_h" startline="103">F</references>
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-        <type>double</type>
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-        <definition>double IsothermalSphere::distf</definition>
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-        <references refid="class_isothermal_sphere_1a5f384f8c77a3f4c6120274eea376e76c" compoundref="isothermal_8_h" startline="103">F</references>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_isothermal_sphere_1a608175b5baa2417e56739b9278ddca3f" compoundref="isothermal_8_h" startline="106">d</references>
-        <references refid="class_isothermal_sphere_1a353eb15404ef0394b38f089d9bad40da" compoundref="isothermal_8_h" startline="107">d2</references>
-        <references refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" compoundref="isothermal_8_h" startline="106">r</references>
-        <references refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" compoundref="isothermal_8_h" startline="109">ret1</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_isothermal_sphere_1a3a9850b58621d4e39af7fc10ca2c069e" compoundref="isothermal_8_h" startline="106">m</references>
-        <references refid="class_isothermal_sphere_1a494fc04c5b66f165bf490c642aa712fe" compoundref="isothermal_8_h" startline="107">m2</references>
-        <references refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" compoundref="isothermal_8_h" startline="106">r</references>
-        <references refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" compoundref="isothermal_8_h" startline="109">ret1</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <references refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" compoundref="isothermal_8_h" startline="106">r</references>
-        <references refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" compoundref="isothermal_8_h" startline="109">ret1</references>
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-        <references refid="class_isothermal_sphere_1a1c3527100e7dc1f0217abcb9cc890b2e" compoundref="isothermal_8_h" startline="101">rscale</references>
-        <references refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" compoundref="isothermal_8_h" startline="100">sigma</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
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-        <briefdescription>
-<para>Access the profile. </para>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_isothermal_sphere_1a3a9850b58621d4e39af7fc10ca2c069e" compoundref="isothermal_8_h" startline="106">m</references>
-        <references refid="class_isothermal_sphere_1a494fc04c5b66f165bf490c642aa712fe" compoundref="isothermal_8_h" startline="107">m2</references>
-        <references refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" compoundref="isothermal_8_h" startline="106">r</references>
-        <references refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" compoundref="isothermal_8_h" startline="109">ret1</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
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-        <references refid="class_isothermal_sphere_1af615d8c36b75ddc92ffcac6b64a6860a" compoundref="isothermal_8_h" startline="102">rmax</references>
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-        <qualifiedname>IsothermalSphere::get_min_radius</qualifiedname>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_isothermal_sphere_1a5778200053831ed09425062e4cc381cb" compoundref="isothermal_8_h" startline="106">p</references>
-        <references refid="class_isothermal_sphere_1af6693cd2abe8b4d6413dff7d1d57fe77" compoundref="isothermal_8_h" startline="107">p2</references>
-        <references refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" compoundref="isothermal_8_h" startline="106">r</references>
-        <references refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" compoundref="isothermal_8_h" startline="109">ret1</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_isothermal_sphere_1a3a9850b58621d4e39af7fc10ca2c069e" compoundref="isothermal_8_h" startline="106">m</references>
-        <references refid="class_isothermal_sphere_1a494fc04c5b66f165bf490c642aa712fe" compoundref="isothermal_8_h" startline="107">m2</references>
-        <references refid="class_isothermal_sphere_1a5778200053831ed09425062e4cc381cb" compoundref="isothermal_8_h" startline="106">p</references>
-        <references refid="class_isothermal_sphere_1af6693cd2abe8b4d6413dff7d1d57fe77" compoundref="isothermal_8_h" startline="107">p2</references>
-        <references refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" compoundref="isothermal_8_h" startline="106">r</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
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diff --git a/doxyxml/class_iterable.xml b/doxyxml/class_iterable.xml
deleted file mode 100644
index 0392f30..0000000
--- a/doxyxml/class_iterable.xml
+++ /dev/null
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deleted file mode 100644
index 3f94c1e..0000000
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deleted file mode 100644
index 267917e..0000000
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-        <type><ref refid="class_k_dtree_1_1_cache" kindref="compound">Cache</ref>&lt; double, <ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref> * &gt;</type>
-        <definition>using KDtree::kdtree&lt; coordinate_type, dimensions &gt;::cache =  Cache&lt;double, node*&gt;</definition>
-        <argsstring></argsstring>
-        <name>cache</name>
-        <qualifiedname>KDtree::kdtree::cache</qualifiedname>
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-        <type><ref refid="class_k_dtree_1_1point" kindref="compound">point</ref>&lt; coordinate_type, dimensions &gt;</type>
-        <definition>using KDtree::kdtree&lt; coordinate_type, dimensions &gt;::point_type =  point&lt;coordinate_type, dimensions&gt;</definition>
-        <argsstring></argsstring>
-        <name>point_type</name>
-        <qualifiedname>KDtree::kdtree::point_type</qualifiedname>
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-        </briefdescription>
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-        <type>std::vector&lt; <ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref> &gt;</type>
-        <definition>std::vector&lt;node&gt; KDtree::kdtree&lt; coordinate_type, dimensions &gt;::nodes_</definition>
-        <argsstring></argsstring>
-        <name>nodes_</name>
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-        <type><ref refid="struct_k_dtree_1_1kdtree_1_1node" kindref="compound">node</ref> *</type>
-        <definition>node* KDtree::kdtree&lt; coordinate_type, dimensions &gt;::root_</definition>
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-        <type>size_t</type>
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-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_k_dtree_1_1point.xml b/doxyxml/class_k_dtree_1_1point.xml
deleted file mode 100644
index 54e0024..0000000
--- a/doxyxml/class_k_dtree_1_1point.xml
+++ /dev/null
@@ -1,429 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_k_dtree_1_1point" kind="class" language="C++" prot="public">
-    <compoundname>KDtree::point</compoundname>
-    <includes refid="_k_dtree_8_h" local="no">KDtree.H</includes>
-    <templateparamlist>
-      <param>
-        <type>typename coordinate_type</type>
-      </param>
-      <param>
-        <type>size_t</type>
-        <declname>dimensions</declname>
-        <defname>dimensions</defname>
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-        <argsstring></argsstring>
-        <name>coords_</name>
-        <qualifiedname>KDtree::point::coords_</qualifiedname>
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-        <name>indx_</name>
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-        <name>mass_</name>
-        <qualifiedname>KDtree::point::mass_</qualifiedname>
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-        <type>std::array&lt; coordinate_type, dimensions &gt;</type>
-        <definition>std::array&lt;coordinate_type, dimensions&gt; KDtree::point&lt; coordinate_type, dimensions &gt;::vels_</definition>
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-        <type>double</type>
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-        <name>speed</name>
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diff --git a/doxyxml/class_kalnajs_disk.xml b/doxyxml/class_kalnajs_disk.xml
deleted file mode 100644
index eb7b3a0..0000000
--- a/doxyxml/class_kalnajs_disk.xml
+++ /dev/null
@@ -1,673 +0,0 @@
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-        <argsstring>(double frac)</argsstring>
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-          <type>double</type>
-          <declname>frac</declname>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <references refid="class_kalnajs_disk_1ad8240d5ee622ba36ad5188cd9e7c301d" compoundref="kalnajs_8_h" startline="15">fac0</references>
-        <references refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" compoundref="kalnajs_8_h" startline="14">omega</references>
-        <references refid="class_kalnajs_disk_1a7e688891aedf03bf19183f303b2ae3cd" compoundref="kalnajs_8_h" startline="13">omega0</references>
-        <references refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" compoundref="kalnajs_8_h" startline="10">rhofac</references>
-        <references refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" compoundref="kalnajs_8_h" startline="8">rmax</references>
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-        <label>MassModel</label>
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-      <node id="4">
-        <label>std::enable_shared_from_this&lt; AxiSymModel &gt;</label>
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-        <label>ANGLE_GRID</label>
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-          <edgelabel>gen_orb</edgelabel>
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-      <node id="8">
-        <label>GaussQuad</label>
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-      <node id="6">
-        <label>RegularOrbit</label>
-        <link refid="class_regular_orbit"/>
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-      <node id="5">
-        <label>SphericalOrbit</label>
-        <link refid="class_spherical_orbit"/>
-        <childnode refid="6" relation="public-inheritance">
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-        <childnode refid="7" relation="usage">
-          <edgelabel>angle_grid</edgelabel>
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-          <edgelabel>Gkn</edgelabel>
-        </childnode>
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-        <label>std::enable_shared_from_this&lt; AxiSymModel &gt;</label>
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diff --git a/doxyxml/class_key_convert.xml b/doxyxml/class_key_convert.xml
deleted file mode 100644
index 14e48a3..0000000
--- a/doxyxml/class_key_convert.xml
+++ /dev/null
@@ -1,248 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-        <qualifiedname>KeyConvert::c</qualifiedname>
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-        <referencedby refid="class_key_convert_1a674fd4740b8fdc0f48121ffac0572bc3" compoundref="_species_8_h" startline="57" endline="57">C</referencedby>
-        <referencedby refid="class_key_convert_1a5d9dde1d011034de9185c26017613e04" compoundref="_species_8_h" startline="48" endline="48">getInt</referencedby>
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-        <referencedby refid="class_key_convert_1aa7078219b3768c16b4d778115cac9d72" compoundref="_species_8_h" startline="39" endline="39">KeyConvert</referencedby>
-        <referencedby refid="class_key_convert_1a29c83d8359b096374d53c33d6d248f1c" compoundref="_species_8_h" startline="60" endline="60">updateC</referencedby>
-        <referencedby refid="class_key_convert_1a0788e53d537ec026b5f6f6b4c1d50c04" compoundref="_species_8_h" startline="54" endline="54">Z</referencedby>
-      </memberdef>
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-        <type>unsigned short</type>
-        <definition>unsigned short KeyConvert::C</definition>
-        <argsstring>()</argsstring>
-        <name>C</name>
-        <qualifiedname>KeyConvert::C</qualifiedname>
-        <briefdescription>
-<para>Get C. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="57" column="18" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="57" bodyend="57"/>
-        <references refid="class_key_convert_1a4256e326c9430fc77f72886a1cfe70af">c</references>
-        <referencedby refid="class_key_convert_1a29c83d8359b096374d53c33d6d248f1c" compoundref="_species_8_h" startline="60" endline="60">updateC</referencedby>
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-        <type>int</type>
-        <definition>int KeyConvert::getInt</definition>
-        <argsstring>()</argsstring>
-        <name>getInt</name>
-        <qualifiedname>KeyConvert::getInt</qualifiedname>
-        <briefdescription>
-<para>Get the converted int. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="48" column="14" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="48" bodyend="48"/>
-        <references refid="class_key_convert_1a4256e326c9430fc77f72886a1cfe70af">c</references>
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-      <memberdef kind="function" id="class_key_convert_1a0672c16940341f6cc80da4ca6f4a8128" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="_species_8_h_1a3f0873301e93f9a5e3ddf62fc0af14e0" kindref="member">speciesKey</ref></type>
-        <definition>speciesKey KeyConvert::getKey</definition>
-        <argsstring>()</argsstring>
-        <name>getKey</name>
-        <qualifiedname>KeyConvert::getKey</qualifiedname>
-        <briefdescription>
-<para>Get the converter speciesKey. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="51" column="14" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="51" bodyend="51"/>
-        <references refid="class_key_convert_1a4256e326c9430fc77f72886a1cfe70af">c</references>
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-        <type></type>
-        <definition>KeyConvert::KeyConvert</definition>
-        <argsstring>()</argsstring>
-        <name>KeyConvert</name>
-        <qualifiedname>KeyConvert::KeyConvert</qualifiedname>
-        <briefdescription>
-<para>Null constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="36" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="36" bodyend="36"/>
-        <references refid="class_key_convert_1a4256e326c9430fc77f72886a1cfe70af">c</references>
-      </memberdef>
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-        <type></type>
-        <definition>KeyConvert::KeyConvert</definition>
-        <argsstring>(const int i)</argsstring>
-        <name>KeyConvert</name>
-        <qualifiedname>KeyConvert::KeyConvert</qualifiedname>
-        <param>
-          <type>const int</type>
-          <declname>i</declname>
-        </param>
-        <briefdescription>
-<para>Constructor taking a converted int (enter value into the union) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="42" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="42" bodyend="42"/>
-        <references refid="class_key_convert_1a4256e326c9430fc77f72886a1cfe70af">c</references>
-        <references refid="class_key_convert_1aef69ff4d3ed3db315e9d3b7800b66bbc" compoundref="_species_8_h" startline="30">i</references>
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-        <type></type>
-        <definition>KeyConvert::KeyConvert</definition>
-        <argsstring>(const KeyConvert &amp;p)</argsstring>
-        <name>KeyConvert</name>
-        <qualifiedname>KeyConvert::KeyConvert</qualifiedname>
-        <param>
-          <type>const <ref refid="class_key_convert" kindref="compound">KeyConvert</ref> &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Copy constructor. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="45" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="45" bodyend="45"/>
-        <references refid="class_key_convert_1a4256e326c9430fc77f72886a1cfe70af">c</references>
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-      <memberdef kind="function" id="class_key_convert_1aa7078219b3768c16b4d778115cac9d72" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>KeyConvert::KeyConvert</definition>
-        <argsstring>(const speciesKey &amp;k)</argsstring>
-        <name>KeyConvert</name>
-        <qualifiedname>KeyConvert::KeyConvert</qualifiedname>
-        <param>
-          <type>const <ref refid="_species_8_h_1a3f0873301e93f9a5e3ddf62fc0af14e0" kindref="member">speciesKey</ref> &amp;</type>
-          <declname>k</declname>
-        </param>
-        <briefdescription>
-<para>Constructor taking a speciesKey (enter values into the union) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="39" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="39" bodyend="39"/>
-        <references refid="class_key_convert_1a4256e326c9430fc77f72886a1cfe70af">c</references>
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-        <type>int</type>
-        <definition>int KeyConvert::updateC</definition>
-        <argsstring>(short unsigned C)</argsstring>
-        <name>updateC</name>
-        <qualifiedname>KeyConvert::updateC</qualifiedname>
-        <param>
-          <type>short unsigned</type>
-          <declname>C</declname>
-        </param>
-        <briefdescription>
-<para>Update C and return int. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="60" column="7" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="60" bodyend="60"/>
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-        <type>unsigned short</type>
-        <definition>unsigned short KeyConvert::Z</definition>
-        <argsstring>()</argsstring>
-        <name>Z</name>
-        <qualifiedname>KeyConvert::Z</qualifiedname>
-        <briefdescription>
-<para>Get Z. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Species.H" line="54" column="18" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="54" bodyend="54"/>
-        <references refid="class_key_convert_1a4256e326c9430fc77f72886a1cfe70af">c</references>
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-    <detaileddescription>
-<para>Wrap a union for converting a speciesKey to an int </para>
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-    <location file="/home/weinberg/Projects/EXP/include/Species.H" line="23" column="1" bodyfile="/home/weinberg/Projects/EXP/include/Species.H" bodystart="24" bodyend="61"/>
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-      <member refid="class_key_convert_1a29c83d8359b096374d53c33d6d248f1c" prot="public" virt="non-virtual"><scope>KeyConvert</scope><name>updateC</name></member>
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diff --git a/doxyxml/class_king_sphere.xml b/doxyxml/class_king_sphere.xml
deleted file mode 100644
index 6a036ba..0000000
--- a/doxyxml/class_king_sphere.xml
+++ /dev/null
@@ -1,407 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_king_sphere" kind="class" language="C++" prot="public">
-    <compoundname>KingSphere</compoundname>
-    <basecompoundref refid="class_spherical_model_table" prot="public" virt="non-virtual">SphericalModelTable</basecompoundref>
-    <includes refid="king_8_h" local="no">king.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_king_sphere_1a82b00f644f8a3b375b783cfd97c3f289" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double KingSphere::betaK</definition>
-        <argsstring></argsstring>
-        <name>betaK</name>
-        <qualifiedname>KingSphere::betaK</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/king.H" line="10" column="10" bodyfile="/home/weinberg/Projects/EXP/include/king.H" bodystart="10" bodyend="-1"/>
-        <referencedby refid="class_king_sphere_1ad89ab099c359f76e7e65b9202c714aa2" compoundref="king_8_h" startline="26" endline="26">d2fde2</referencedby>
-        <referencedby refid="class_king_sphere_1af1471186410f1902c5840ba4035346a2" compoundref="king_8_h" startline="25" endline="25">dfde</referencedby>
-        <referencedby refid="class_king_sphere_1ae981250fa1763ce5fb8ca72651f509fd" compoundref="king_8_h" startline="24" endline="24">distf</referencedby>
-        <referencedby refid="class_king_sphere_1a0b59261568d6888256e1cc8a18be578b" compoundref="king_8_h" startline="18" endline="23">setup_df</referencedby>
-      </memberdef>
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-        <type>double</type>
-        <definition>double KingSphere::E0K</definition>
-        <argsstring></argsstring>
-        <name>E0K</name>
-        <qualifiedname>KingSphere::E0K</qualifiedname>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/king.H" line="11" column="10" bodyfile="/home/weinberg/Projects/EXP/include/king.H" bodystart="11" bodyend="-1"/>
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-        <definition>double KingSphere::kingK</definition>
-        <argsstring></argsstring>
-        <name>kingK</name>
-        <qualifiedname>KingSphere::kingK</qualifiedname>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/king.H" line="9" column="10" bodyfile="/home/weinberg/Projects/EXP/include/king.H" bodystart="9" bodyend="-1"/>
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-        <qualifiedname>KingSphere::d2fde2</qualifiedname>
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deleted file mode 100644
index 460f66b..0000000
--- a/doxyxml/class_lagu_quad.xml
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diff --git a/doxyxml/class_lege_quad.xml b/doxyxml/class_lege_quad.xml
deleted file mode 100644
index 0a2cf31..0000000
--- a/doxyxml/class_lege_quad.xml
+++ /dev/null
@@ -1,90 +0,0 @@
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diff --git a/doxyxml/class_legendre.xml b/doxyxml/class_legendre.xml
deleted file mode 100644
index 52e9d43..0000000
--- a/doxyxml/class_legendre.xml
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-        <name>f0</name>
-        <qualifiedname>Legendre::f0</qualifiedname>
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-        <type>double</type>
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-        <type>double</type>
-        <definition>double Legendre::h</definition>
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-        <name>h</name>
-        <qualifiedname>Legendre::h</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a012dedf1c757a8ac3c999f2c6c2c6b05">h</reimplements>
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-          <type>const int</type>
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-        <type></type>
-        <definition>Legendre::Legendre</definition>
-        <argsstring>(void)</argsstring>
-        <name>Legendre</name>
-        <qualifiedname>Legendre::Legendre</qualifiedname>
-        <param>
-          <type>void</type>
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-        <type>double</type>
-        <definition>double Legendre::w</definition>
-        <argsstring>(const double x)</argsstring>
-        <name>w</name>
-        <qualifiedname>Legendre::w</qualifiedname>
-        <reimplements refid="class_ortho_poly_1a789ce34b2842e2ddf958e0af56cdc4e6">w</reimplements>
-        <param>
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-        <briefdescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="84" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="84" bodyend="84"/>
-      </memberdef>
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-    <inheritancegraph>
-      <node id="1">
-        <label>Legendre</label>
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-        </childnode>
-      </node>
-      <node id="2">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
-      </node>
-      <node id="3">
-        <label>PVQuad</label>
-        <link refid="class_p_v_quad"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>Legendre</label>
-        <link refid="class_legendre"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
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-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="73" column="1" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="74" bodyend="95"/>
-    <listofallmembers>
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-      <member refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" prot="protected" virt="non-virtual"><scope>Legendre</scope><name>b</name></member>
-      <member refid="class_legendre_1a0d1d4e87fc98c1863a3aa583f126f402" prot="public" virt="virtual"><scope>Legendre</scope><name>coef1</name></member>
-      <member refid="class_legendre_1a269daa87798014d15c424060036918cf" prot="public" virt="virtual"><scope>Legendre</scope><name>coef2</name></member>
-      <member refid="class_legendre_1af4ee4c6b608f71e0b294b606de7cf900" prot="public" virt="virtual"><scope>Legendre</scope><name>coef3</name></member>
-      <member refid="class_legendre_1a9ba54f9872f17576e0537f87df0ac718" prot="public" virt="virtual"><scope>Legendre</scope><name>coef4</name></member>
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-      <member refid="class_legendre_1a6194ebf2e2c7f9ad707a68260d1d5418" prot="public" virt="virtual"><scope>Legendre</scope><name>f1</name></member>
-      <member refid="class_ortho_poly_1aed2903244bcd8423c11ddb3343f701c0" prot="public" virt="non-virtual"><scope>Legendre</scope><name>fv</name></member>
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-      <member refid="class_legendre_1a434e3f774067d26051087fe0c49f2620" prot="public" virt="non-virtual"><scope>Legendre</scope><name>Legendre</name></member>
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-      <member refid="class_legendre_1a0e7d5d53f303b11e78706f9368a690c8" prot="public" virt="virtual"><scope>Legendre</scope><name>w</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_linear1d.xml b/doxyxml/class_linear1d.xml
deleted file mode 100644
index a505600..0000000
--- a/doxyxml/class_linear1d.xml
+++ /dev/null
@@ -1,252 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_linear1d" kind="class" language="C++" prot="public">
-    <compoundname>Linear1d</compoundname>
-    <basecompoundref refid="class_interp1d" prot="public" virt="non-virtual">Interp1d</basecompoundref>
-    <includes refid="interp_8_h" local="no">interp.H</includes>
-    <sectiondef kind="private-attrib">
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-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Linear1d::x</definition>
-        <argsstring></argsstring>
-        <name>x</name>
-        <qualifiedname>Linear1d::x</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="197" column="19" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="197" bodyend="-1"/>
-        <referencedby refid="class_linear1d_1a784960cd9590a7a394a69fd5b9bd3ad3" compoundref="interp_8_h" startline="226" endline="226">xhi</referencedby>
-        <referencedby refid="class_linear1d_1a871aea7a921331a671183d361cd3b2e0" compoundref="interp_8_h" startline="225" endline="225">xlo</referencedby>
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-        <argsstring></argsstring>
-        <name>y</name>
-        <qualifiedname>Linear1d::y</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="198" column="19" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="198" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double Linear1d::deriv</definition>
-        <argsstring>(const double &amp;x)</argsstring>
-        <name>deriv</name>
-        <qualifiedname>Linear1d::deriv</qualifiedname>
-        <reimplements refid="class_interp1d_1a47936fb17ab09ba1a5adae98615703f7">deriv</reimplements>
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-          <type>const double &amp;</type>
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-        <briefdescription>
-<para>Evaluate first derivative. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="221" column="10"/>
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-        <type>double</type>
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-        <name>eval</name>
-        <qualifiedname>Linear1d::eval</qualifiedname>
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-        <param>
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-        <briefdescription>
-<para>Evaluate the interpolant. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="218" column="10"/>
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-        <name>Linear1d</name>
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-        <briefdescription>
-<para>Null constructor. </para>
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-        <type></type>
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-        <name>Linear1d</name>
-        <qualifiedname>Linear1d::Linear1d</qualifiedname>
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-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
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-        <briefdescription>
-<para>Construct from Eigen input. </para>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <name>Linear1d</name>
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-        <param>
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-<para>Construct from std::vector input. </para>
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-        <type>double</type>
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-        <argsstring>()</argsstring>
-        <name>xhi</name>
-        <qualifiedname>Linear1d::xhi</qualifiedname>
-        <reimplements refid="class_interp1d_1a7acc2957f6163115ad925d21d9ab2783">xhi</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="226" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="226" bodyend="226"/>
-        <references refid="class_linear1d_1a7cd1d60114eda9389f3226b860f2075c" compoundref="interp_8_h" startline="197">x</references>
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-        <type>double</type>
-        <definition>double Linear1d::xlo</definition>
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-        <name>xlo</name>
-        <qualifiedname>Linear1d::xlo</qualifiedname>
-        <reimplements refid="class_interp1d_1ad7d8aaee41f1df6e533bfbb3089e8b67">xlo</reimplements>
-        <briefdescription>
-<para>Data limits. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <name>~Linear1d</name>
-        <qualifiedname>Linear1d::~Linear1d</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="215" column="3"/>
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-    </briefdescription>
-    <detaileddescription>
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-      <node id="2">
-        <label>Interp1d</label>
-        <link refid="class_interp1d"/>
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-      <node id="1">
-        <label>Linear1d</label>
-        <link refid="class_linear1d"/>
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-        <link refid="class_interp1d"/>
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-      <node id="1">
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-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
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deleted file mode 100644
index 18a1f69..0000000
--- a/doxyxml/class_logarithmic.xml
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diff --git a/doxyxml/class_low_iso.xml b/doxyxml/class_low_iso.xml
deleted file mode 100644
index 1a720a5..0000000
--- a/doxyxml/class_low_iso.xml
+++ /dev/null
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diff --git a/doxyxml/class_low_sing_isothermal_sphere.xml b/doxyxml/class_low_sing_isothermal_sphere.xml
deleted file mode 100644
index 93901fb..0000000
--- a/doxyxml/class_low_sing_isothermal_sphere.xml
+++ /dev/null
@@ -1,805 +0,0 @@
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-        <references refid="class_low_sing_isothermal_sphere_1a0a37ae779bd4afb91041ed724f2049b3" compoundref="isothermal_8_h" startline="192">F</references>
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-        <type>double</type>
-        <definition>double LowSingIsothermalSphere::dfde</definition>
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-        <references refid="class_low_sing_isothermal_sphere_1a0a37ae779bd4afb91041ed724f2049b3" compoundref="isothermal_8_h" startline="192">F</references>
-        <references refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" compoundref="isothermal_8_h" startline="194">num</references>
-        <references refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" compoundref="isothermal_8_h" startline="195">p</references>
-        <references refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" compoundref="isothermal_8_h" startline="192">sigma</references>
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-        <type>double</type>
-        <definition>double LowSingIsothermalSphere::dfdl</definition>
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-        <references refid="class_low_sing_isothermal_sphere_1a0a37ae779bd4afb91041ed724f2049b3" compoundref="isothermal_8_h" startline="192">F</references>
-        <references refid="class_low_sing_isothermal_sphere_1a8b8b5ab900e6b8b772363e5b541ad9af" compoundref="isothermal_8_h" startline="192">Fconst</references>
-        <references refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" compoundref="isothermal_8_h" startline="194">num</references>
-        <references refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" compoundref="isothermal_8_h" startline="195">p</references>
-        <references refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" compoundref="isothermal_8_h" startline="192">sigma</references>
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-        <type>double</type>
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-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="215" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="215" bodyend="221"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_low_sing_isothermal_sphere_1ade36ef051d539d8b99a726bb69cbf32d" compoundref="isothermal_8_h" startline="195">d</references>
-        <references refid="class_low_sing_isothermal_sphere_1a7bcd266bea840a5438c388ef56c212c1" compoundref="isothermal_8_h" startline="196">d2</references>
-        <references refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" compoundref="isothermal_8_h" startline="198">ret1</references>
-        <references refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" compoundref="isothermal_8_h" startline="191">rmax</references>
-        <references refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" compoundref="isothermal_8_h" startline="190">rmin</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
-        <references refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" compoundref="isothermal_8_h" startline="195">u</references>
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-        <type>double</type>
-        <definition>double LowSingIsothermalSphere::get_dpot</definition>
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-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="231" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="231" bodyend="237"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" compoundref="isothermal_8_h" startline="195">m</references>
-        <references refid="class_low_sing_isothermal_sphere_1ae7d9269e8b0187bbfdde1a90e49a15aa" compoundref="isothermal_8_h" startline="196">m2</references>
-        <references refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" compoundref="isothermal_8_h" startline="194">num</references>
-        <references refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" compoundref="isothermal_8_h" startline="198">ret1</references>
-        <references refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" compoundref="isothermal_8_h" startline="191">rmax</references>
-        <references refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" compoundref="isothermal_8_h" startline="190">rmin</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
-        <references refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" compoundref="isothermal_8_h" startline="195">u</references>
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-        <type>double</type>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_low_sing_isothermal_sphere_1ade36ef051d539d8b99a726bb69cbf32d" compoundref="isothermal_8_h" startline="195">d</references>
-        <references refid="class_low_sing_isothermal_sphere_1a7bcd266bea840a5438c388ef56c212c1" compoundref="isothermal_8_h" startline="196">d2</references>
-        <references refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" compoundref="isothermal_8_h" startline="195">m</references>
-        <references refid="class_low_sing_isothermal_sphere_1ae7d9269e8b0187bbfdde1a90e49a15aa" compoundref="isothermal_8_h" startline="196">m2</references>
-        <references refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" compoundref="isothermal_8_h" startline="194">num</references>
-        <references refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" compoundref="isothermal_8_h" startline="198">ret1</references>
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-        <references refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" compoundref="isothermal_8_h" startline="191">rmax</references>
-        <references refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" compoundref="isothermal_8_h" startline="190">rmin</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
-        <references refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" compoundref="isothermal_8_h" startline="195">u</references>
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-        <type>double</type>
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-<para>Access the profile. </para>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" compoundref="isothermal_8_h" startline="195">m</references>
-        <references refid="class_low_sing_isothermal_sphere_1ae7d9269e8b0187bbfdde1a90e49a15aa" compoundref="isothermal_8_h" startline="196">m2</references>
-        <references refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" compoundref="isothermal_8_h" startline="194">num</references>
-        <references refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" compoundref="isothermal_8_h" startline="198">ret1</references>
-        <references refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" compoundref="isothermal_8_h" startline="191">rmax</references>
-        <references refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" compoundref="isothermal_8_h" startline="190">rmin</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
-        <references refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" compoundref="isothermal_8_h" startline="195">u</references>
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-        <type>double</type>
-        <definition>double LowSingIsothermalSphere::get_max_radius</definition>
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-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="266" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="266" bodyend="266"/>
-        <references refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" compoundref="isothermal_8_h" startline="191">rmax</references>
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-        <type>double</type>
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-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="265" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="265" bodyend="265"/>
-        <references refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" compoundref="isothermal_8_h" startline="190">rmin</references>
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-      <memberdef kind="function" id="class_low_sing_isothermal_sphere_1a581e5085c4464562c63ee2193a050fe4" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double LowSingIsothermalSphere::get_pot</definition>
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-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="223" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="223" bodyend="229"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" compoundref="isothermal_8_h" startline="195">m</references>
-        <references refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" compoundref="isothermal_8_h" startline="194">num</references>
-        <references refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" compoundref="isothermal_8_h" startline="195">p</references>
-        <references refid="class_low_sing_isothermal_sphere_1ab6bfbd1f4707749f1521de2edf8db8bc" compoundref="isothermal_8_h" startline="196">p2</references>
-        <references refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" compoundref="isothermal_8_h" startline="198">ret1</references>
-        <references refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" compoundref="isothermal_8_h" startline="191">rmax</references>
-        <references refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" compoundref="isothermal_8_h" startline="190">rmin</references>
-        <references refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5">Splint1</references>
-        <references refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" compoundref="isothermal_8_h" startline="195">u</references>
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-        <references refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" compoundref="isothermal_8_h" startline="195">u</references>
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-      <member refid="class_axi_sym_model_1a8ec2585dc6f33e2ebae4f8dd3d22fc5a" prot="public" virt="virtual"><scope>LowSingIsothermalSphere</scope><name>gen_point</name></member>
-      <member refid="class_axi_sym_model_1a5e4cb31e8463807b1b14b3858c5c03b2" prot="public" virt="virtual"><scope>LowSingIsothermalSphere</scope><name>gen_point</name></member>
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-      <member refid="class_axi_sym_model_1a18ecb1fa667cf977306b34d3dab34ed1" prot="protected" virt="non-virtual"><scope>LowSingIsothermalSphere</scope><name>gen_point_2d</name></member>
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-      <member refid="class_axi_sym_model_1a20602aa25410c1f5d2bc3bf017899049" prot="protected" virt="non-virtual"><scope>LowSingIsothermalSphere</scope><name>gen_point_3d</name></member>
-      <member refid="class_axi_sym_model_1adcafd558768aeb72e0cc483f231a1be5" prot="public" virt="virtual"><scope>LowSingIsothermalSphere</scope><name>gen_point_jeans</name></member>
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-      <member refid="class_low_sing_isothermal_sphere_1aff60f7adc80bced5775c6d240c5635fb" prot="public" virt="virtual"><scope>LowSingIsothermalSphere</scope><name>get_mass</name></member>
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-      <member refid="class_low_sing_isothermal_sphere_1a581e5085c4464562c63ee2193a050fe4" prot="public" virt="virtual"><scope>LowSingIsothermalSphere</scope><name>get_pot</name></member>
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deleted file mode 100644
index 4a027fe..0000000
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diff --git a/doxyxml/class_make_model.xml b/doxyxml/class_make_model.xml
deleted file mode 100644
index f898f29..0000000
--- a/doxyxml/class_make_model.xml
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-        <definition>void MakeModel::WriteModel</definition>
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-        <name>WriteModel</name>
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diff --git a/doxyxml/class_mass_model.xml b/doxyxml/class_mass_model.xml
deleted file mode 100644
index 8a1fe46..0000000
--- a/doxyxml/class_mass_model.xml
+++ /dev/null
@@ -1,469 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_mass_model" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>MassModel</compoundname>
-    <derivedcompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</derivedcompoundref>
-    <derivedcompoundref refid="class_one_d_model" prot="public" virt="non-virtual">OneDModel</derivedcompoundref>
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-        <type>bool</type>
-        <definition>bool MassModel::defined</definition>
-        <argsstring></argsstring>
-        <name>defined</name>
-        <qualifiedname>MassModel::defined</qualifiedname>
-        <briefdescription>
-<para>True if model is assigned. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="83" column="8" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="83" bodyend="-1"/>
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-        <definition>int MassModel::dim</definition>
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-        <name>dim</name>
-        <qualifiedname>MassModel::dim</qualifiedname>
-        <briefdescription>
-<para>The number of dimensions (degrees of freedom) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="79" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="79" bodyend="-1"/>
-        <referencedby refid="class_cyl_disk_1aa7f980839ab56946643178c66df0e964" compoundref="_cyl_disk_8_h" startline="32" endline="41">CylDisk::CylDisk</referencedby>
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-      </memberdef>
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-        <definition>string MassModel::ModelID</definition>
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-        <briefdescription>
-<para>Model identifier. </para>
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-        <referencedby refid="class_sing_isothermal_sphere_1a210a5ddff4461cf1d3243a02a6478ed3" compoundref="isothermal_8_h" startline="57" endline="61">SingIsothermalSphere::get_dpot2</referencedby>
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-        <referencedby refid="class_low_sing_isothermal_sphere_1a6a44dfbfa2ad5937b6cfe5a068b68fc8" compoundref="isothermal_8_h" startline="239" endline="246">LowSingIsothermalSphere::get_dpot2</referencedby>
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-        <referencedby refid="class_sing_isothermal_sphere_1ab63b9164597005000c18be9c66c9e20f" compoundref="isothermal_8_h" startline="33" endline="37">SingIsothermalSphere::get_mass</referencedby>
-        <referencedby refid="class_isothermal_sphere_1a78ea7eadfc4c1a01d0165dc967cc0a17" compoundref="isothermal_8_h" startline="118" endline="122">IsothermalSphere::get_mass</referencedby>
-        <referencedby refid="class_low_sing_isothermal_sphere_1aff60f7adc80bced5775c6d240c5635fb" compoundref="isothermal_8_h" startline="207" endline="213">LowSingIsothermalSphere::get_mass</referencedby>
-        <referencedby refid="class_zang_disk_1a229046b198a9ffd95baefc88e9388eb9" compoundref="zang_8_h" startline="47" endline="51">ZangDisk::get_mass</referencedby>
-        <referencedby refid="class_sing_isothermal_sphere_1ab47f2182f44a6283f80c5e5edda7bf79" compoundref="isothermal_8_h" startline="45" endline="49">SingIsothermalSphere::get_pot</referencedby>
-        <referencedby refid="class_isothermal_sphere_1a177d24c8a32acf07112b565ad250c3b3" compoundref="isothermal_8_h" startline="130" endline="134">IsothermalSphere::get_pot</referencedby>
-        <referencedby refid="class_low_sing_isothermal_sphere_1a581e5085c4464562c63ee2193a050fe4" compoundref="isothermal_8_h" startline="223" endline="229">LowSingIsothermalSphere::get_pot</referencedby>
-        <referencedby refid="class_zang_disk_1a287c37a90ab8b8c4f4ee7972274e624e" compoundref="zang_8_h" startline="60" endline="64">ZangDisk::get_pot</referencedby>
-        <referencedby refid="class_sing_isothermal_sphere_1ad03dc3e35204f79725d280b625b1f1ad" compoundref="isothermal_8_h" startline="63" endline="66">SingIsothermalSphere::get_pot_dpot</referencedby>
-        <referencedby refid="class_isothermal_sphere_1a0a79504dca46958d47c045e4b01339c0" compoundref="isothermal_8_h" startline="151" endline="160">IsothermalSphere::get_pot_dpot</referencedby>
-        <referencedby refid="class_low_sing_isothermal_sphere_1a044e953df452522efe8975ef73b7cbdc" compoundref="isothermal_8_h" startline="248" endline="261">LowSingIsothermalSphere::get_pot_dpot</referencedby>
-        <referencedby refid="class_zang_disk_1af2038b4bef8b0b974a9a670b619ba0a7" compoundref="zang_8_h" startline="80" endline="83">ZangDisk::get_pot_dpot</referencedby>
-        <referencedby refid="class_kalnajs_disk_1a80de707425a8a22662e9c2607c4c8d59" compoundref="kalnajs_8_h" startline="74" endline="81">KalnajsDisk::setup_df</referencedby>
-        <referencedby refid="class_king_sphere_1a0b59261568d6888256e1cc8a18be578b" compoundref="king_8_h" startline="18" endline="23">KingSphere::setup_df</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_mass_model_1a92409cb4786626a1beb92bea71d05846" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int MassModel::dof</definition>
-        <argsstring>()</argsstring>
-        <name>dof</name>
-        <qualifiedname>MassModel::dof</qualifiedname>
-        <briefdescription>
-<para>Return the number of dimensions (degrees of freedom) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="97" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="97" bodyend="97"/>
-        <references refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" compoundref="massmodel_8_h" startline="79">dim</references>
-        <referencedby refid="class_axi_sym_model_1a5e4cb31e8463807b1b14b3858c5c03b2" compoundref="massmodel_8_h" startline="251" endline="260">AxiSymModel::gen_point</referencedby>
-        <referencedby refid="class_axi_sym_model_1a8ec2585dc6f33e2ebae4f8dd3d22fc5a" compoundref="massmodel_8_h" startline="239" endline="248">AxiSymModel::gen_point</referencedby>
-        <referencedby refid="class_axi_sym_model_1a29297280d1fb4603b2138a7a2ede86f4" compoundref="massmodel_8_h" startline="215" endline="224">AxiSymModel::gen_point</referencedby>
-        <referencedby refid="class_axi_sym_model_1adcafd558768aeb72e0cc483f231a1be5" compoundref="massmodel_8_h" startline="227" endline="236">AxiSymModel::gen_point_jeans</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_mass_model_1a5faf20e029b7a79d2cd7e159b7c81636" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double MassModel::get_density</definition>
-        <argsstring>(const double, const double, const double)=0</argsstring>
-        <name>get_density</name>
-        <qualifiedname>MassModel::get_density</qualifiedname>
-        <reimplementedby refid="class_one_d_model_1aa72ae0534d1742dc620ef51c1b7bb87c">get_density</reimplementedby>
-        <reimplementedby refid="class_sech2_1af760557ea3916d454b7dc60b44a3c323">get_density</reimplementedby>
-        <reimplementedby refid="class_sech2mu_1a7148b943d8985eb9fa5e4b8b134723fe">get_density</reimplementedby>
-        <reimplementedby refid="class_embedded_disk_model_1a5c763b865ff6b4caeb10eac78e753195">get_density</reimplementedby>
-        <reimplementedby refid="class_spherical_model_table_1a2e8fbb9f875f6f5a02349ef4af6589db">get_density</reimplementedby>
-        <reimplementedby refid="class_spherical_model_multi_1a7b6112e6579a55f85ac0fa259e31a74f">get_density</reimplementedby>
-        <reimplementedby refid="class_disk_with_halo_1ab499a49471cc87ecb12638adce08a15d">get_density</reimplementedby>
-        <reimplementedby refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc">get_density</reimplementedby>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The density at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="92" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mass_model_1a657bee82481d328f8b1d52f95a6f0616" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double MassModel::get_mass</definition>
-        <argsstring>(const double, const double, const double)=0</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>MassModel::get_mass</qualifiedname>
-        <reimplementedby refid="class_one_d_model_1a7d460c77bbe4df3c606646fc1f85b3cc">get_mass</reimplementedby>
-        <reimplementedby refid="class_sech2_1ac8af79ba12e9d21498ec79fd48362343">get_mass</reimplementedby>
-        <reimplementedby refid="class_sech2mu_1aaf514c80063dbf15738c07818af79667">get_mass</reimplementedby>
-        <reimplementedby refid="class_embedded_disk_model_1af5bbd571cbf33b33a467787f0573dd86">get_mass</reimplementedby>
-        <reimplementedby refid="class_spherical_model_table_1a61db5a62762d085aaba14e2c6e49eac7">get_mass</reimplementedby>
-        <reimplementedby refid="class_spherical_model_multi_1a551f086df0f5490988e4c24dfee68814">get_mass</reimplementedby>
-        <reimplementedby refid="class_disk_with_halo_1a68515654dbe5f8d4d27fdd5d4cc3bfcf">get_mass</reimplementedby>
-        <reimplementedby refid="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787">get_mass</reimplementedby>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get the mass inside of position (x, y, z) (this is ambiguous in general and will depend on the model) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="90" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mass_model_1ad41f6d36e5774e490c7d82ca12f49c78" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double MassModel::get_pot</definition>
-        <argsstring>(const double, const double, const double)=0</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>MassModel::get_pot</qualifiedname>
-        <reimplementedby refid="class_one_d_model_1adb23181ed139049e72215399fd35903d">get_pot</reimplementedby>
-        <reimplementedby refid="class_sech2_1a13e2545a2667f66503a698fbaf50501d">get_pot</reimplementedby>
-        <reimplementedby refid="class_sech2mu_1ad9e04f22e60d76c1bd019d4735d4dc28">get_pot</reimplementedby>
-        <reimplementedby refid="class_embedded_disk_model_1a4cd777af4aeb22c21232eeb6bdae8ceb">get_pot</reimplementedby>
-        <reimplementedby refid="class_spherical_model_table_1a8070023a8858287d4cb5e50a66d64043">get_pot</reimplementedby>
-        <reimplementedby refid="class_spherical_model_multi_1a6461fc2527edb5dff8274536be27b94d">get_pot</reimplementedby>
-        <reimplementedby refid="class_disk_with_halo_1ab713038bfeeee6c0abc96760fa6f0a1f">get_pot</reimplementedby>
-        <reimplementedby refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc">get_pot</reimplementedby>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The potential at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="94" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mass_model_1a95c0338ca07d1b2ea284c3c2605dc9b8" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual MassModel::~MassModel</definition>
-        <argsstring>()</argsstring>
-        <name>~MassModel</name>
-        <qualifiedname>MassModel::~MassModel</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="86" column="11" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="86" bodyend="86"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>A three-dimensional density-potential model. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>AxiSymModel</label>
-        <link refid="class_axi_sym_model"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>CylDisk</label>
-        <link refid="class_cyl_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>DiskWithHalo</label>
-        <link refid="class_disk_with_halo"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>EmbeddedDiskModel</label>
-        <link refid="class_embedded_disk_model"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>ExponentialDisk</label>
-        <link refid="class_exponential_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>GeneralizedPolytrope</label>
-        <link refid="class_generalized_polytrope"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>HernquistSphere</label>
-        <link refid="class_hernquist_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>HunterDisk</label>
-        <link refid="class_hunter_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>HunterDiskX</label>
-        <link refid="class_hunter_disk_x"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>IsothermalSphere</label>
-        <link refid="class_isothermal_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>KalnajsDisk</label>
-        <link refid="class_kalnajs_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>KingSphere</label>
-        <link refid="class_king_sphere"/>
-        <childnode refid="19" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="25">
-        <label>LowIso</label>
-        <link refid="class_low_iso"/>
-        <childnode refid="24" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>LowSingIsothermalSphere</label>
-        <link refid="class_low_sing_isothermal_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>MassModel</label>
-        <link refid="class_mass_model"/>
-      </node>
-      <node id="14">
-        <label>MestelDisk</label>
-        <link refid="class_mestel_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="23">
-        <label>OneDModel</label>
-        <link refid="class_one_d_model"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="24">
-        <label>OneDModelTable</label>
-        <link refid="class_one_d_model_table"/>
-        <childnode refid="23" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="16">
-        <label>PlummerSphere</label>
-        <link refid="class_plummer_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="27">
-        <label>Sech2</label>
-        <link refid="class_sech2"/>
-        <childnode refid="23" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="26">
-        <label>Sech2Halo</label>
-        <link refid="class_sech2_halo"/>
-        <childnode refid="24" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="28">
-        <label>Sech2mu</label>
-        <link refid="class_sech2mu"/>
-        <childnode refid="23" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="17">
-        <label>SingIsothermalSphere</label>
-        <link refid="class_sing_isothermal_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="18">
-        <label>SphericalModelMulti</label>
-        <link refid="class_spherical_model_multi"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>SphericalModelTable</label>
-        <link refid="class_spherical_model_table"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>TaperedMestelDisk</label>
-        <link refid="class_tapered_mestel_disk"/>
-        <childnode refid="14" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="21">
-        <label>ToomreDisk</label>
-        <link refid="class_toomre_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="22">
-        <label>ZangDisk</label>
-        <link refid="class_zang_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="73" column="1" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="75" bodyend="107"/>
-    <listofallmembers>
-      <member refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" prot="public" virt="non-virtual"><scope>MassModel</scope><name>bomb</name></member>
-      <member refid="class_mass_model_1afd175166ced6f7768342b631f983eb1a" prot="public" virt="non-virtual"><scope>MassModel</scope><name>defined</name></member>
-      <member refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" prot="public" virt="non-virtual"><scope>MassModel</scope><name>dim</name></member>
-      <member refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" prot="public" virt="non-virtual"><scope>MassModel</scope><name>dof</name></member>
-      <member refid="class_mass_model_1a5faf20e029b7a79d2cd7e159b7c81636" prot="public" virt="pure-virtual"><scope>MassModel</scope><name>get_density</name></member>
-      <member refid="class_mass_model_1a657bee82481d328f8b1d52f95a6f0616" prot="public" virt="pure-virtual"><scope>MassModel</scope><name>get_mass</name></member>
-      <member refid="class_mass_model_1ad41f6d36e5774e490c7d82ca12f49c78" prot="public" virt="pure-virtual"><scope>MassModel</scope><name>get_pot</name></member>
-      <member refid="class_mass_model_1acf360c000464aca6299bc47894672d70" prot="public" virt="non-virtual"><scope>MassModel</scope><name>ModelID</name></member>
-      <member refid="class_mass_model_1a95c0338ca07d1b2ea284c3c2605dc9b8" prot="public" virt="virtual"><scope>MassModel</scope><name>~MassModel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_master_header.xml b/doxyxml/class_master_header.xml
deleted file mode 100644
index 5fba454..0000000
--- a/doxyxml/class_master_header.xml
+++ /dev/null
@@ -1,92 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_master_header" kind="class" language="C++" prot="public">
-    <compoundname>MasterHeader</compoundname>
-    <includes refid="header_8_h" local="no">header.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_master_header_1a82a7d46ec81c38029ac9b5af87b519ba" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int MasterHeader::ncomp</definition>
-        <argsstring></argsstring>
-        <name>ncomp</name>
-        <qualifiedname>MasterHeader::ncomp</qualifiedname>
-        <briefdescription>
-<para>Number of individual components. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="23" column="7" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_master_header_1a0edb1744a62098076050d39929bea7f9" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int MasterHeader::ntot</definition>
-        <argsstring></argsstring>
-        <name>ntot</name>
-        <qualifiedname>MasterHeader::ntot</qualifiedname>
-        <briefdescription>
-<para>Number of particles in entire phase space. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="20" column="7" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_master_header_1a57c58e93be3ab14b4e3595078eb0a0be" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double MasterHeader::time</definition>
-        <argsstring></argsstring>
-        <name>time</name>
-        <qualifiedname>MasterHeader::time</qualifiedname>
-        <briefdescription>
-<para>Current time for phase space. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/header.H" line="17" column="10" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="17" bodyend="-1"/>
-        <referencedby refid="class_p_r_1_1_p_s_p_1adceed7e0b520c1e2b97875428fad369c" compoundref="_particle_reader_8_h" startline="374" endline="374">PR::PSP::CurrentTime</referencedby>
-        <referencedby refid="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" compoundref="_p_s_p2_8_h" startline="278" endline="278">PSP::CurrentTime</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="friend">
-      <memberdef kind="friend" id="class_master_header_1a9ab88cc6694f471ce24c62b3590a4db9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::ostream &amp;</type>
-        <definition>std::ostream &amp; operator&lt;&lt;</definition>
-        <argsstring>(std::ostream &amp;os, const MasterHeader &amp;p)</argsstring>
-        <name>operator&lt;&lt;</name>
-        <qualifiedname>MasterHeader::operator&lt;&lt;</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>os</declname>
-        </param>
-        <param>
-          <type>const <ref refid="class_master_header" kindref="compound">MasterHeader</ref> &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Describe the phase space dump. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/header.H" line="14" column="1" bodyfile="/home/weinberg/Projects/EXP/include/header.H" bodystart="14" bodyend="36"/>
-    <listofallmembers>
-      <member refid="class_master_header_1a82a7d46ec81c38029ac9b5af87b519ba" prot="public" virt="non-virtual"><scope>MasterHeader</scope><name>ncomp</name></member>
-      <member refid="class_master_header_1a0edb1744a62098076050d39929bea7f9" prot="public" virt="non-virtual"><scope>MasterHeader</scope><name>ntot</name></member>
-      <member refid="class_master_header_1a9ab88cc6694f471ce24c62b3590a4db9" prot="public" virt="non-virtual"><scope>MasterHeader</scope><name>operator&lt;&lt;</name></member>
-      <member refid="class_master_header_1a57c58e93be3ab14b4e3595078eb0a0be" prot="public" virt="non-virtual"><scope>MasterHeader</scope><name>time</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_mestel_disk.xml b/doxyxml/class_mestel_disk.xml
deleted file mode 100644
index f04be7d..0000000
--- a/doxyxml/class_mestel_disk.xml
+++ /dev/null
@@ -1,586 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_mestel_disk" kind="class" language="C++" prot="public">
-    <compoundname>MestelDisk</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
-    <derivedcompoundref refid="class_tapered_mestel_disk" prot="public" virt="non-virtual">TaperedMestelDisk</derivedcompoundref>
-    <includes refid="mestel_8_h" local="no">mestel.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_mestel_disk_1a87a747c435e0e1740f1d17c32b770742" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double MestelDisk::F</definition>
-        <argsstring></argsstring>
-        <name>F</name>
-        <qualifiedname>MestelDisk::F</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="17" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="17" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_mestel_disk_1aae9a2d283afdf8b77548a429d7f69321" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double MestelDisk::q</definition>
-        <argsstring></argsstring>
-        <name>q</name>
-        <qualifiedname>MestelDisk::q</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="16" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="16" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_mestel_disk_1ac82917594139682c44266bbf37eb813e" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double MestelDisk::rmax</definition>
-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>MestelDisk::rmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="14" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="14" bodyend="-1"/>
-        <referencedby refid="class_mestel_disk_1adcdeacbdad30170e0852e71e638f6dd1" compoundref="mestel_8_h" startline="43" endline="43">get_max_radius</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_mestel_disk_1abd6a8c75bc6c7f591f9874a1ef75a80f" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double MestelDisk::rmin</definition>
-        <argsstring></argsstring>
-        <name>rmin</name>
-        <qualifiedname>MestelDisk::rmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="13" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="13" bodyend="-1"/>
-        <referencedby refid="class_mestel_disk_1ae3eaab23ae085a5c3241b002b17855b5" compoundref="mestel_8_h" startline="42" endline="42">get_min_radius</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_mestel_disk_1add1c9d6d45f3b25ba64b411b8545b5b5" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double MestelDisk::rot</definition>
-        <argsstring></argsstring>
-        <name>rot</name>
-        <qualifiedname>MestelDisk::rot</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="12" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="12" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_mestel_disk_1a437bbc35d16ea2c4516e62c2d421c874" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double MestelDisk::sig2</definition>
-        <argsstring></argsstring>
-        <name>sig2</name>
-        <qualifiedname>MestelDisk::sig2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="15" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="15" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_mestel_disk_1a9c840743e6af99359305d3490b54fec0" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double MestelDisk::vrot</definition>
-        <argsstring></argsstring>
-        <name>vrot</name>
-        <qualifiedname>MestelDisk::vrot</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="11" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="11" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_mestel_disk_1a0cd32b3001517e2173f1d14e9f011ae3" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double MestelDisk::d2fde2</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>d2fde2</name>
-        <qualifiedname>MestelDisk::d2fde2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a12d39568c81a72b9e3ea2277816d05f9">d2fde2</reimplements>
-        <reimplementedby refid="class_tapered_mestel_disk_1a5fe0190b190d5026952fef9731e45208">d2fde2</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="53" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mestel_disk_1ac5915664d0690e8d2a487540ce06501a" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double MestelDisk::dfde</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfde</name>
-        <qualifiedname>MestelDisk::dfde</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a2978a19f299f41fdea7e3cefc1164e3a">dfde</reimplements>
-        <reimplementedby refid="class_tapered_mestel_disk_1ad985eb7201634305edce026a81424095">dfde</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="49" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mestel_disk_1ad743a23293683bff020b2c47facf30b2" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double MestelDisk::dfdl</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfdl</name>
-        <qualifiedname>MestelDisk::dfdl</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a120cec5af54e43d727f83df8678cc93b">dfdl</reimplements>
-        <reimplementedby refid="class_tapered_mestel_disk_1a1debf27dd5007ea752970e8965eac9ff">dfdl</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="51" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mestel_disk_1a169af93ecbedfdd0b42e79463055adf9" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double MestelDisk::distf</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>distf</name>
-        <qualifiedname>MestelDisk::distf</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a5530c3612f1c09c6c77401a9e21550b8">distf</reimplements>
-        <reimplementedby refid="class_tapered_mestel_disk_1a24836328a2a4a9357f5ef3c7fc326d72">distf</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="47" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mestel_disk_1a29c3230f2e6e415237a6a87831ad9d6a" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double MestelDisk::get_density</definition>
-        <argsstring>(const double R)</argsstring>
-        <name>get_density</name>
-        <qualifiedname>MestelDisk::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</reimplements>
-        <reimplementedby refid="class_tapered_mestel_disk_1a1b18fe2e00fd489f8e08dfe958e612cb">get_density</reimplementedby>
-        <param>
-          <type>const double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="28" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mestel_disk_1a2d99e916b5c7db8c3cf653de463d643b" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double MestelDisk::get_dpot</definition>
-        <argsstring>(const double R)</argsstring>
-        <name>get_dpot</name>
-        <qualifiedname>MestelDisk::get_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845">get_dpot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="32" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_mestel_disk_1a71dfc91bc5793d2d0d6d528a307d2243" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double MestelDisk::get_dpot2</definition>
-        <argsstring>(const double R)</argsstring>
-        <name>get_dpot2</name>
-        <qualifiedname>MestelDisk::get_dpot2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a77b9bb693457557d379167ca0ca2caae">get_dpot2</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="34" column="10"/>
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-        <type>double</type>
-        <definition>virtual double MestelDisk::get_mass</definition>
-        <argsstring>(const double R)</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>MestelDisk::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465">get_mass</reimplements>
-        <reimplementedby refid="class_tapered_mestel_disk_1a64fdc1f995e140df8bb8d7172cb5bc95">get_mass</reimplementedby>
-        <param>
-          <type>const double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-<para>Required member functions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="26" column="18"/>
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-      <memberdef kind="function" id="class_mestel_disk_1adcdeacbdad30170e0852e71e638f6dd1" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double MestelDisk::get_max_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_max_radius</name>
-        <qualifiedname>MestelDisk::get_max_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a87510a095e6b9533812eba57c7ca862c">get_max_radius</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="43" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="43" bodyend="43"/>
-        <references refid="class_mestel_disk_1ac82917594139682c44266bbf37eb813e" compoundref="mestel_8_h" startline="14">rmax</references>
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-      <memberdef kind="function" id="class_mestel_disk_1ae3eaab23ae085a5c3241b002b17855b5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double MestelDisk::get_min_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_min_radius</name>
-        <qualifiedname>MestelDisk::get_min_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab304897a450a2d79f4e27841526b70e9">get_min_radius</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Addiional member functions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="42" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="42" bodyend="42"/>
-        <references refid="class_mestel_disk_1abd6a8c75bc6c7f591f9874a1ef75a80f" compoundref="mestel_8_h" startline="13">rmin</references>
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-      <memberdef kind="function" id="class_mestel_disk_1aeee315217f39af166b224991cb007d6b" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double MestelDisk::get_pot</definition>
-        <argsstring>(const double R)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>MestelDisk::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="30" column="10"/>
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-        <type>void</type>
-        <definition>void MestelDisk::get_pot_dpot</definition>
-        <argsstring>(const double R, double &amp;ur, double &amp;dur)</argsstring>
-        <name>get_pot_dpot</name>
-        <qualifiedname>MestelDisk::get_pot_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a4fc766458a1f45b3ece0410b2c85b632">get_pot_dpot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>ur</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dur</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="36" column="8"/>
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-      <memberdef kind="function" id="class_mestel_disk_1a490ef57d0a14dd806d23a55ada6df9b7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>MestelDisk::MestelDisk</definition>
-        <argsstring>(double VROT=1.0, double RMIN=1.0e-6, double RMAX=1.0e6)</argsstring>
-        <name>MestelDisk</name>
-        <qualifiedname>MestelDisk::MestelDisk</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>VROT</declname>
-          <defval>1.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>RMIN</declname>
-          <defval>1.0e-6</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>RMAX</declname>
-          <defval>1.0e6</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="22" column="3"/>
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-        <type>void</type>
-        <definition>virtual void MestelDisk::setup_df</definition>
-        <argsstring>(double sigma)</argsstring>
-        <name>setup_df</name>
-        <qualifiedname>MestelDisk::setup_df</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>sigma</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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diff --git a/doxyxml/class_mixture_basis.xml b/doxyxml/class_mixture_basis.xml
deleted file mode 100644
index c125f7e..0000000
--- a/doxyxml/class_mixture_basis.xml
+++ /dev/null
@@ -1,249 +0,0 @@
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diff --git a/doxyxml/class_miyamoto.xml b/doxyxml/class_miyamoto.xml
deleted file mode 100644
index 15a15b0..0000000
--- a/doxyxml/class_miyamoto.xml
+++ /dev/null
@@ -1,297 +0,0 @@
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diff --git a/doxyxml/class_miyamoto___needle.xml b/doxyxml/class_miyamoto___needle.xml
deleted file mode 100644
index d07f5ad..0000000
--- a/doxyxml/class_miyamoto___needle.xml
+++ /dev/null
@@ -1,484 +0,0 @@
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deleted file mode 100644
index f90315a..0000000
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diff --git a/doxyxml/class_monot_cubic_interpolator.xml b/doxyxml/class_monot_cubic_interpolator.xml
deleted file mode 100644
index 84a6007..0000000
--- a/doxyxml/class_monot_cubic_interpolator.xml
+++ /dev/null
@@ -1,1263 +0,0 @@
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::addPair</definition>
-        <argsstring>(double newx, double newf)</argsstring>
-        <name>addPair</name>
-        <qualifiedname>MonotCubicInterpolator::addPair</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>newx</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>newf</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>newx</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>New x point </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>newf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>New f(x) point</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Adds a new datapoint to the function.</para>
-<para>This causes all the derivatives at all points of the functions to be recomputed and then adjusted for monotone cubic interpolation. If this function ever enters a critical part of any code, the locality of the algorithm for monotone adjustment must be exploited. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::chopFlatEndpoints</definition>
-        <argsstring>()</argsstring>
-        <name>chopFlatEndpoints</name>
-        <qualifiedname>MonotCubicInterpolator::chopFlatEndpoints</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Wrapper function for <ref refid="class_monot_cubic_interpolator_1a91de72bd2bff6f7d3bf0b5b82002ccd4" kindref="member">chopFlatEndpoints(const double)</ref> providing a default epsilon parameter </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::chopFlatEndpoints</definition>
-        <argsstring>(const double)</argsstring>
-        <name>chopFlatEndpoints</name>
-        <qualifiedname>MonotCubicInterpolator::chopFlatEndpoints</qualifiedname>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Checks if the function curve is flat at the endpoints, chop off endpoint data points if that is the case.</para>
-<para>The notion of &quot;flat&quot; is determined by the input parameter &quot;epsilon&quot; Values whose difference are less than epsilon are regarded as equal.</para>
-<para>This is implemented to be able to obtain a strictly monotone curve from a data set that is strictly monotone except at the endpoints.</para>
-<para>Example: The data points (1,3), (2,3), (3,4), (4,5), (5,5), (6,5) will become (2,3), (3,4), (4,5)</para>
-<para>Assumes at least 3 datapoints. If less than three, this function is a noop. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double MonotCubicInterpolator::evaluate</definition>
-        <argsstring>(double x) const</argsstring>
-        <name>evaluate</name>
-        <qualifiedname>MonotCubicInterpolator::evaluate</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>x</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>x value</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Returns f(x) for given x (input). Interpolates (monotone cubic or linearly) if necessary.</para>
-<para>Extrapolates using the constants f(x_min) or f(x_max) if input x is outside (x_min, x_max)</para>
-<para><simplesect kind="return"><para>f(x) for a given x </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <referencedby refid="class_monot_cubic_interpolator_1a0958e5f35b2ce7a3694e39270086cc4e" compoundref="_monot_cubic_interpolator_8_h" startline="198" endline="198">operator()</referencedby>
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-        <type>double</type>
-        <definition>double MonotCubicInterpolator::evaluate</definition>
-        <argsstring>(double x, double &amp;errorestimate_output) const</argsstring>
-        <name>evaluate</name>
-        <qualifiedname>MonotCubicInterpolator::evaluate</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>errorestimate_output</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>x</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>x value </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>errorestimate_output</parametername>
-</parameternamelist>
-<parameterdescription>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Returns f(x) and an error estimate for given x (input).</para>
-<para>Interpolates (linearly) if necessary.</para>
-<para>Throws an exception if extrapolation would be necessary for evaluation. We do not want to do extrapolation (yet).</para>
-<para>The error estimate for x1 &lt; x &lt; x2 is (x2 - x1)^2/8 * f&apos;&apos;(x) where f&apos;&apos;(x) is evaluated using the stencil (1 -2 1) using either (x0, x1, x2) or (x1, x2, x3);</para>
-<para>Throws an exception if the table contains only two x-values.</para>
-<para>NOT IMPLEMENTED YET! </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt; double &gt; MonotCubicInterpolator::get_fVector</definition>
-        <argsstring>() const</argsstring>
-        <name>get_fVector</name>
-        <qualifiedname>MonotCubicInterpolator::get_fVector</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Provide a copy of tghe function data as a vector</para>
-<para>Unspecified order, but corresponds to get_xVector</para>
-<para><simplesect kind="return"><para>f values as a vector </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" line="290" column="15"/>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt; double &gt; MonotCubicInterpolator::get_xVector</definition>
-        <argsstring>() const</argsstring>
-        <name>get_xVector</name>
-        <qualifiedname>MonotCubicInterpolator::get_xVector</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Provide a copy of the x-data as a vector</para>
-<para>Unspecified order, but corresponds to get_fVector.</para>
-<para><simplesect kind="return"><para>x values as a vector </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" line="280" column="15"/>
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-        <type>std::pair&lt; double, double &gt;</type>
-        <definition>std::pair&lt; double, double &gt; MonotCubicInterpolator::getMaximumF</definition>
-        <argsstring>() const</argsstring>
-        <name>getMaximumF</name>
-        <qualifiedname>MonotCubicInterpolator::getMaximumF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Maximum f-value, returns both x and f in a pair.</para>
-<para><simplesect kind="return"><para>x value corresponding to maximum f value </para>
-</simplesect>
-<simplesect kind="return"><para>maximum f value </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::pair&lt; double, double &gt;</type>
-        <definition>std::pair&lt; double, double &gt; MonotCubicInterpolator::getMaximumX</definition>
-        <argsstring>() const</argsstring>
-        <name>getMaximumX</name>
-        <qualifiedname>MonotCubicInterpolator::getMaximumX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Maximum x-value, returns both x and f in a pair.</para>
-<para><simplesect kind="return"><para>maximum x value </para>
-</simplesect>
-<simplesect kind="return"><para>f(maximum x value) </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" line="251" column="13" bodyfile="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" bodystart="251" bodyend="254"/>
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-        <type>std::pair&lt; double, double &gt;</type>
-        <definition>std::pair&lt; double, double &gt; MonotCubicInterpolator::getMinimumF</definition>
-        <argsstring>() const</argsstring>
-        <name>getMinimumF</name>
-        <qualifiedname>MonotCubicInterpolator::getMinimumF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Minimum f-value, returns both x and f in a pair</para>
-<para><simplesect kind="return"><para>x value corresponding to minimal f value </para>
-</simplesect>
-<simplesect kind="return"><para>minimum f value </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::pair&lt; double, double &gt;</type>
-        <definition>std::pair&lt; double, double &gt; MonotCubicInterpolator::getMinimumX</definition>
-        <argsstring>() const</argsstring>
-        <name>getMinimumX</name>
-        <qualifiedname>MonotCubicInterpolator::getMinimumX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Minimum x-value, returns both x and f in a pair.</para>
-<para><simplesect kind="return"><para>minimum x value </para>
-</simplesect>
-<simplesect kind="return"><para>f(minimum x value) </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" line="240" column="13" bodyfile="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" bodystart="240" bodyend="243"/>
-        <references refid="class_monot_cubic_interpolator_1a664653849fba0adff687da21f92a2c50" compoundref="_monot_cubic_interpolator_8_h" startline="502">data</references>
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-        <type>std::pair&lt; double, double &gt;</type>
-        <definition>std::pair&lt; double, double &gt; MonotCubicInterpolator::getMissingX</definition>
-        <argsstring>() const</argsstring>
-        <name>getMissingX</name>
-        <qualifiedname>MonotCubicInterpolator::getMissingX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Returns an x-value that is believed to yield the best improvement in global accuracy for the interpolation if computed.</para>
-<para>Searches for the largest jump in f-values, and returns a x value being the average of the two x-values representing the f-value-jump.</para>
-<para><simplesect kind="return"><para>New x value beleived to yield the best improvement in global accuracy </para>
-</simplesect>
-<simplesect kind="return"><para>Maximal difference </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" line="428" column="13"/>
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-      <memberdef kind="function" id="class_monot_cubic_interpolator_1a7e51d95079f77bb617feeacd12eee26e" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int MonotCubicInterpolator::getSize</definition>
-        <argsstring>() const</argsstring>
-        <name>getSize</name>
-        <qualifiedname>MonotCubicInterpolator::getSize</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para><simplesect kind="return"><para>Number of datapoint pairs in this object </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" line="440" column="7" bodyfile="/home/weinberg/Projects/EXP/include/MonotCubicInterpolator.H" bodystart="440" bodyend="442"/>
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-        <type>bool</type>
-        <definition>bool MonotCubicInterpolator::isMonotone</definition>
-        <argsstring>() const</argsstring>
-        <name>isMonotone</name>
-        <qualifiedname>MonotCubicInterpolator::isMonotone</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Determines if the current function-value-data is monotone.</para>
-<para><simplesect kind="return"><para>True if f(x) is monotone, else False </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37">computeInternalFunctionData</references>
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-        <references refid="class_monot_cubic_interpolator_1abccf505d969bf6761287a05c02fb231d" compoundref="_monot_cubic_interpolator_8_h" startline="514">monotoneCached</references>
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-        <type>bool</type>
-        <definition>bool MonotCubicInterpolator::isMonotoneDecreasing</definition>
-        <argsstring>() const</argsstring>
-        <name>isMonotoneDecreasing</name>
-        <qualifiedname>MonotCubicInterpolator::isMonotoneDecreasing</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Determines if the current function-value-data is monotone and decreasing</para>
-<para><simplesect kind="return"><para>True if f(x) is monotone and decreasing, else False </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37">computeInternalFunctionData</references>
-        <references refid="class_monot_cubic_interpolator_1ae62d5b8ddd32a797a58f8f331a3e3147" compoundref="_monot_cubic_interpolator_8_h" startline="522">decreasing</references>
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-        <type>bool</type>
-        <definition>bool MonotCubicInterpolator::isMonotoneIncreasing</definition>
-        <argsstring>() const</argsstring>
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-        <qualifiedname>MonotCubicInterpolator::isMonotoneIncreasing</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Determines if the current function-value-data is monotone and increasing.</para>
-<para><simplesect kind="return"><para>True if f(x) is monotone and increasing, else False </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_monot_cubic_interpolator_1a0e586e116460ac35936e5ccc78059d37">computeInternalFunctionData</references>
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-<para>Determines if the current function-value-data is strictly increasing. This is a utility function for outsiders if they want to invert the data for example.</para>
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-Accepts two equal-length vectors as input for constructing the interpolation object. First vector is the x-values, the second vector is the function values </para>
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::scaleData</definition>
-        <argsstring>(double factor)</argsstring>
-        <name>scaleData</name>
-        <qualifiedname>MonotCubicInterpolator::scaleData</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>factor</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>factor</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>Scaling constant</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Scale all the function value data by a constant </para>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::shrinkFlatAreas</definition>
-        <argsstring>()</argsstring>
-        <name>shrinkFlatAreas</name>
-        <qualifiedname>MonotCubicInterpolator::shrinkFlatAreas</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Wrapper function for <ref refid="class_monot_cubic_interpolator_1ae9cd95952a0251fe8c44ab8305ed1a1e" kindref="member">shrinkFlatAreas(const double)</ref> providing a default epsilon parameter </para>
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-        </inbodydescription>
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-        <references refid="class_monot_cubic_interpolator_1afec063b4c7537300ed99905d025c0ef6" compoundref="_monot_cubic_interpolator_8_h" startline="493" endline="495">shrinkFlatAreas</references>
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::shrinkFlatAreas</definition>
-        <argsstring>(const double)</argsstring>
-        <name>shrinkFlatAreas</name>
-        <qualifiedname>MonotCubicInterpolator::shrinkFlatAreas</qualifiedname>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>If function is monotone, but not strictly monotone, this function will remove datapoints from intervals with zero derivative so that the curve become strictly monotone.</para>
-<para>Example The data points (1,2), (2,3), (3,4), (4,4), (5,5), (6,6) will become (1,2), (2,3), (3,4), (5,5), (6,6)</para>
-<para>Assumes at least two datapoints, if one or zero datapoint, this is a noop. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::string</type>
-        <definition>std::string MonotCubicInterpolator::toString</definition>
-        <argsstring>() const</argsstring>
-        <name>toString</name>
-        <qualifiedname>MonotCubicInterpolator::toString</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructs a string containing the data in a table</para>
-<para><simplesect kind="return"><para>a string containing the data in a table </para>
-</simplesect>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::adjustDerivativesForMonotoneness</definition>
-        <argsstring>() const</argsstring>
-        <name>adjustDerivativesForMonotoneness</name>
-        <qualifiedname>MonotCubicInterpolator::adjustDerivativesForMonotoneness</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Adjusts the derivative values (ddata) so that we can guarantee that the resulting piecewise <ref refid="class_hermite" kindref="compound">Hermite</ref> polymial is monotone. This is done according to the algorithm of Fritsch and Carlsson 1980, see Section 4, especially the two last lines. </para>
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::computeInternalFunctionData</definition>
-        <argsstring>() const</argsstring>
-        <name>computeInternalFunctionData</name>
-        <qualifiedname>MonotCubicInterpolator::computeInternalFunctionData</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void MonotCubicInterpolator::computeSimpleDerivatives</definition>
-        <argsstring>() const</argsstring>
-        <name>computeSimpleDerivatives</name>
-        <qualifiedname>MonotCubicInterpolator::computeSimpleDerivatives</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Computes initial derivative values using centered (second order) difference for internal datapoints, and one-sided derivative for endpoints</para>
-<para>The internal datastructure map&lt;double,double&gt; ddata is populated by this method. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double MonotCubicInterpolator::H00</definition>
-        <argsstring>(double t) const</argsstring>
-        <name>H00</name>
-        <qualifiedname>MonotCubicInterpolator::H00</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>double MonotCubicInterpolator::H01</definition>
-        <argsstring>(double t) const</argsstring>
-        <name>H01</name>
-        <qualifiedname>MonotCubicInterpolator::H01</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
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-        <detaileddescription>
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-        <type>double</type>
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-        <argsstring>(double t) const</argsstring>
-        <name>H10</name>
-        <qualifiedname>MonotCubicInterpolator::H10</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
-        </param>
-        <briefdescription>
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-        <type>double</type>
-        <definition>double MonotCubicInterpolator::H11</definition>
-        <argsstring>(double t) const</argsstring>
-        <name>H11</name>
-        <qualifiedname>MonotCubicInterpolator::H11</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type>bool</type>
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-        <argsstring>(double alpha, double beta) const</argsstring>
-        <name>isMonotoneCoeff</name>
-        <qualifiedname>MonotCubicInterpolator::isMonotoneCoeff</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>alpha</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>beta</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Checks if the coefficient alpha and beta is in the region that guarantees monotoneness of the derivative values they represent</para>
-<para>See Fritsch and Carlson 1980, Lemma 2, alternatively Step 5 in Wikipedia&apos;s article on Monotone cubic interpolation. </para>
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-        </inbodydescription>
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-    </sectiondef>
-    <briefdescription>
-<para>Represents one dimensional function f with single valued argument x that can be interpolated using monotone cubic interpolation. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>Class to represent a one-dimensional function f with single-valued argument x. The function is represented by a table of function values. Interpolation between table values is cubic and monotonicity preserving if input values are monotonous.</para>
-<para>Outside x_min and x_max, the class will extrapolate using the constant f(x_min) or f(x_max).</para>
-<para>Extra functionality:<itemizedlist>
-<listitem><para>Can return (x_1+x_2)/2 where x_1 and x_2 are such that abs(f(x_1) - f(x_2)) is maximized. This is used to determine where one should calculate a new value for increased accuracy in the current function</para>
-</listitem></itemizedlist>
-</para>
-<para>Monotonicity preserving cubic interpolation algorithm is taken from Fritsch and Carlson, &quot;Monotone piecewise cubic interpolation&quot;, SIAM J. Numer. Anal. 17, 238<ndash/>246, no. 2,</para>
-<para>$Id$</para>
-<para>Algorithm also described here: <ulink url="http://en.wikipedia.org/wiki/Monotone_cubic_interpolation">http://en.wikipedia.org/wiki/Monotone_cubic_interpolation</ulink></para>
-<para><simplesect kind="author"><para>Håvard Berland &lt;havb (at) statoil.com&gt;, December 2006, Updated for &gt;=C++ 11 by M. Weinberg </para>
-</simplesect>
-</para>
-    </detaileddescription>
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diff --git a/doxyxml/class_needle.xml b/doxyxml/class_needle.xml
deleted file mode 100644
index 1c82ef4..0000000
--- a/doxyxml/class_needle.xml
+++ /dev/null
@@ -1,400 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_needle" kind="class" language="C++" prot="public">
-    <compoundname>Needle</compoundname>
-    <includes refid="models_8_h" local="no">models.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Needle::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>Needle::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="152" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="152" bodyend="-1"/>
-        <referencedby refid="class_needle_1ad692ff263e9d90338b9b3052edb3816a" compoundref="models_8_h" startline="169" endline="169">get_a</referencedby>
-        <referencedby refid="class_needle_1accee337e6efab3da6bdae66686765b98" compoundref="models_8_h" startline="165" endline="165">set_a</referencedby>
-        <referencedby refid="class_needle_1a3c58b0e4135faa95a36e44653d1dfbc0" compoundref="models_8_h" startline="167" endline="167">set_M</referencedby>
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-      <memberdef kind="variable" id="class_needle_1acccc70f01c9ae06877af1ea8d353b5ee" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Needle::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>Needle::b</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="152" column="12" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="152" bodyend="-1"/>
-        <referencedby refid="class_needle_1a3945e9e46b7aa2f89882e40e78b40511" compoundref="models_8_h" startline="170" endline="170">get_b</referencedby>
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-        <referencedby refid="class_needle_1a29fc9818b2ddd13c112eed5efcb8c317" compoundref="models_8_h" startline="155" endline="163">set_Needle</referencedby>
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-      <memberdef kind="variable" id="class_needle_1adaceee367efcdcdef413cc06a7109993" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Needle::G</definition>
-        <argsstring></argsstring>
-        <name>G</name>
-        <qualifiedname>Needle::G</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="153" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="153" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_needle_1a186ec11513dc8467b1a784e70d5a357c" prot="protected" static="no" mutable="no">
-        <type>double</type>
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-        <qualifiedname>Needle::k</qualifiedname>
-        <briefdescription>
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-        <type>double</type>
-        <definition>double Needle::kf</definition>
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-        <name>kf</name>
-        <qualifiedname>Needle::kf</qualifiedname>
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-        <type>Eigen::Vector3d</type>
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-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
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-        <qualifiedname>Needle::force</qualifiedname>
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-        <qualifiedname>Needle::force</qualifiedname>
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-        <type>double</type>
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-        <qualifiedname>Needle::set_Needle</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>aa</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>bb</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>gg</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mm</declname>
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-        <references refid="numerical_8_h_1acf1c38f71f39386356edb151a131ad11" compoundref="numerical_8_h" startline="20">TINY</references>
-      </memberdef>
-      <memberdef kind="function" id="class_needle_1a29fc9818b2ddd13c112eed5efcb8c317" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Needle::set_Needle</definition>
-        <argsstring>(double aa, double bb, double gg, double mm)</argsstring>
-        <name>set_Needle</name>
-        <qualifiedname>Needle::set_Needle</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>aa</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>bb</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>gg</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mm</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/needle.H" line="11" column="6" bodyfile="/home/weinberg/Projects/EXP/include/needle.H" bodystart="11" bodyend="19"/>
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-        <references refid="class_needle_1adaceee367efcdcdef413cc06a7109993" compoundref="models_8_h" startline="153">G</references>
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-        <references refid="class_needle_1a1118a299c0e2885c943b3c5ec0c10568" compoundref="models_8_h" startline="153">kf</references>
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-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/models.H" line="149" column="1" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="150" bodyend="175"/>
-    <listofallmembers>
-      <member refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" prot="protected" virt="non-virtual"><scope>Needle</scope><name>a</name></member>
-      <member refid="class_needle_1acccc70f01c9ae06877af1ea8d353b5ee" prot="protected" virt="non-virtual"><scope>Needle</scope><name>b</name></member>
-      <member refid="class_needle_1af8c1d34fd8b10c5f017935b8efaa4135" prot="public" virt="non-virtual"><scope>Needle</scope><name>force</name></member>
-      <member refid="class_needle_1a7be7d0775048cd505319e5bedf286345" prot="public" virt="non-virtual"><scope>Needle</scope><name>force</name></member>
-      <member refid="class_needle_1adaceee367efcdcdef413cc06a7109993" prot="protected" virt="non-virtual"><scope>Needle</scope><name>G</name></member>
-      <member refid="class_needle_1ad692ff263e9d90338b9b3052edb3816a" prot="public" virt="non-virtual"><scope>Needle</scope><name>get_a</name></member>
-      <member refid="class_needle_1a3945e9e46b7aa2f89882e40e78b40511" prot="public" virt="non-virtual"><scope>Needle</scope><name>get_b</name></member>
-      <member refid="class_needle_1aacb7c0a8f8535c66db1e66867ccf44ce" prot="public" virt="non-virtual"><scope>Needle</scope><name>get_M</name></member>
-      <member refid="class_needle_1a186ec11513dc8467b1a784e70d5a357c" prot="protected" virt="non-virtual"><scope>Needle</scope><name>k</name></member>
-      <member refid="class_needle_1a1118a299c0e2885c943b3c5ec0c10568" prot="protected" virt="non-virtual"><scope>Needle</scope><name>kf</name></member>
-      <member refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" prot="protected" virt="non-virtual"><scope>Needle</scope><name>M</name></member>
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-      <member refid="class_needle_1a117f633d08a7681f19b88a4a097c2586" prot="public" virt="non-virtual"><scope>Needle</scope><name>potential</name></member>
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-      <member refid="class_needle_1a29fc9818b2ddd13c112eed5efcb8c317" prot="public" virt="non-virtual"><scope>Needle</scope><name>set_Needle</name></member>
-      <member refid="class_needle_1a29fc9818b2ddd13c112eed5efcb8c317" prot="public" virt="non-virtual"><scope>Needle</scope><name>set_Needle</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_no_force.xml b/doxyxml/class_no_force.xml
deleted file mode 100644
index e7e4d77..0000000
--- a/doxyxml/class_no_force.xml
+++ /dev/null
@@ -1,325 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_no_force" kind="class" language="C++" prot="public">
-    <compoundname>NoForce</compoundname>
-    <basecompoundref refid="class_pot_accel" prot="public" virt="non-virtual">PotAccel</basecompoundref>
-    <includes refid="_no_force_8_h" local="no">NoForce.H</includes>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_no_force_1a80e706be89887dea929ae9d836c01fde" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void NoForce::determine_acceleration_and_potential</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>NoForce::determine_acceleration_and_potential</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/NoForce.H" line="22" column="8" bodyfile="/home/weinberg/Projects/EXP/src/NoForce.H" bodystart="22" bodyend="22"/>
-      </memberdef>
-      <memberdef kind="function" id="class_no_force_1a8946b23a0b1a612ca83e61f64cdf71d4" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void *</type>
-        <definition>void * NoForce::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>NoForce::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the force computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/NoForce.H" line="25" column="9" bodyfile="/home/weinberg/Projects/EXP/src/NoForce.H" bodystart="25" bodyend="25"/>
-      </memberdef>
-      <memberdef kind="function" id="class_no_force_1a3b0fb5d0abb1146c7a4aa34e3332ff38" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>void NoForce::determine_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>NoForce::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Used by get_acceleration_and_potential to request that the expansion be performed. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/NoForce.H" line="21" column="8" bodyfile="/home/weinberg/Projects/EXP/src/NoForce.H" bodystart="21" bodyend="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_no_force_1ae88d57ef6a9f9823a714648c94570ecd" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void *</type>
-        <definition>void * NoForce::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
-        <qualifiedname>NoForce::determine_coefficients_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49">determine_coefficients_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Multithreading implementation of the expansion computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/NoForce.H" line="24" column="9" bodyfile="/home/weinberg/Projects/EXP/src/NoForce.H" bodystart="24" bodyend="24"/>
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-        <type>void</type>
-        <definition>void NoForce::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>NoForce::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/NoForce.H" line="19" column="8" bodyfile="/home/weinberg/Projects/EXP/src/NoForce.H" bodystart="19" bodyend="19"/>
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-        <type>void</type>
-        <definition>void NoForce::get_acceleration_and_potential</definition>
-        <argsstring>(Component *)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>NoForce::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        </param>
-        <briefdescription>
-<para>The main force call. </para>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type></type>
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-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
-<para>The constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (a <ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>conf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is ignored here <linebreak/>
- </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/NoForce.H" line="32" column="3"/>
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-        <type></type>
-        <definition>virtual NoForce::~NoForce</definition>
-        <argsstring>()</argsstring>
-        <name>~NoForce</name>
-        <qualifiedname>NoForce::~NoForce</qualifiedname>
-        <briefdescription>
-<para>The constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/NoForce.H" line="35" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>A <emphasis>NULL</emphasis> force method</para>
-<para>Applies no acceleration to the particles whatsoever. This allows the user to supply an alternative as an external force. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>NoForce</label>
-        <link refid="class_no_force"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="4">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="2" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="6">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="1">
-        <label>NoForce</label>
-        <link refid="class_no_force"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="3">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/NoForce.H" line="15" column="1" bodyfile="/home/weinberg/Projects/EXP/src/NoForce.H" bodystart="16" bodyend="40"/>
-    <listofallmembers>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>NoForce</scope><name>atol</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>cC</name></member>
-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>NoForce</scope><name>cc_lock</name></member>
-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>NoForce</scope><name>ClearExternal</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>coef_dump</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>NoForce</scope><name>compute</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>conf</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>NoForce</scope><name>cube</name></member>
-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>cuda_aware</name></member>
-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>NoForce</scope><name>cudaAware</name></member>
-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>current_keys</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>NoForce</scope><name>cylinder</name></member>
-      <member refid="class_no_force_1a80e706be89887dea929ae9d836c01fde" prot="private" virt="non-virtual"><scope>NoForce</scope><name>determine_acceleration_and_potential</name></member>
-      <member refid="class_no_force_1a8946b23a0b1a612ca83e61f64cdf71d4" prot="private" virt="virtual"><scope>NoForce</scope><name>determine_acceleration_and_potential_thread</name></member>
-      <member refid="class_no_force_1a3b0fb5d0abb1146c7a4aa34e3332ff38" prot="private" virt="virtual"><scope>NoForce</scope><name>determine_coefficients</name></member>
-      <member refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724" prot="public" virt="virtual" ambiguityscope="PotAccel::"><scope>NoForce</scope><name>determine_coefficients</name></member>
-      <member refid="class_no_force_1ae88d57ef6a9f9823a714648c94570ecd" prot="private" virt="virtual"><scope>NoForce</scope><name>determine_coefficients_thread</name></member>
-      <member refid="class_pot_accel_1a6a9ec23d29b553c1625bd8e88fe7692d" prot="public" virt="non-virtual"><scope>NoForce</scope><name>dof</name></member>
-      <member refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf" prot="public" virt="virtual"><scope>NoForce</scope><name>dump_coefs</name></member>
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-      <member refid="class_pot_accel_1adb6ef0bdae7d3520ca1f9fd8a6d648ea" prot="public" virt="non-virtual"><scope>NoForce</scope><name>geometry</name></member>
-      <member refid="class_pot_accel_1ade38f6ecdf80f80cde847d463b14909b" prot="public" virt="non-virtual"><scope>NoForce</scope><name>geoname</name></member>
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-      <member refid="class_pot_accel_1a4a812594dff363f07bf57d69a60e4a13" prot="public" virt="non-virtual"><scope>NoForce</scope><name>HaveCoefDump</name></member>
-      <member refid="class_pot_accel_1a1cdb2381070d7772caf533433455284c" prot="public" virt="non-virtual"><scope>NoForce</scope><name>id</name></member>
-      <member refid="class_no_force_1a361db5a4e98f0fdd9d6948f1e6f92a3a" prot="private" virt="virtual"><scope>NoForce</scope><name>initialize</name></member>
-      <member refid="class_pot_accel_1a706b04f03c8beb4369dd125406770116" prot="public" virt="non-virtual"><scope>NoForce</scope><name>kill_mutex</name></member>
-      <member refid="class_pot_accel_1a65fa890eea987e18d552825ab074939b" prot="public" virt="non-virtual"><scope>NoForce</scope><name>make_mutex</name></member>
-      <member refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>mlevel</name></member>
-      <member refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121" prot="public" virt="virtual"><scope>NoForce</scope><name>multistep_debug</name></member>
-      <member refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f" prot="public" virt="virtual"><scope>NoForce</scope><name>multistep_reset</name></member>
-      <member refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a" prot="public" virt="virtual"><scope>NoForce</scope><name>multistep_update</name></member>
-      <member refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381" prot="public" virt="virtual"><scope>NoForce</scope><name>multistep_update_begin</name></member>
-      <member refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e" prot="public" virt="virtual"><scope>NoForce</scope><name>multistep_update_finish</name></member>
-      <member refid="class_pot_accel_1a73976f361ed7abf13001835bfcdee639" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>nbodies</name></member>
-      <member refid="class_pot_accel_1a4f2099b1b705731b909e63c90ea59f04" prot="public" virt="non-virtual"><scope>NoForce</scope><name>NoCoefs</name></member>
-      <member refid="class_no_force_1a4d59d132fbf708b8039c58ee420c343c" prot="public" virt="non-virtual"><scope>NoForce</scope><name>NoForce</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda7c49f38007dad33fb1e48fdebdd2f8c1" prot="public" virt="non-virtual"><scope>NoForce</scope><name>other</name></member>
-      <member refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>play_back</name></member>
-      <member refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>play_cnew</name></member>
-      <member refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" prot="public" virt="non-virtual"><scope>NoForce</scope><name>PotAccel</name></member>
-      <member refid="class_pot_accel_1a5e257d38dbf5c3d9630906a96abf6915" prot="public" virt="non-virtual"><scope>NoForce</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a37a3c348c0febbf70ff94949071c3beb" prot="public" virt="non-virtual"><scope>NoForce</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb" prot="public" virt="virtual"><scope>NoForce</scope><name>RegisterComponent</name></member>
-      <member refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>scale</name></member>
-      <member refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" prot="public" virt="virtual"><scope>NoForce</scope><name>set_multistep_level</name></member>
-      <member refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" prot="public" virt="non-virtual"><scope>NoForce</scope><name>SetExternal</name></member>
-      <member refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" prot="public" virt="virtual"><scope>NoForce</scope><name>setScale</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda0a1acd8c0d6e745fb0ae3e33e458a9b8" prot="public" virt="non-virtual"><scope>NoForce</scope><name>slab</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda996ce4577548b6da6b1330a78b1c6f6a" prot="public" virt="non-virtual"><scope>NoForce</scope><name>sphere</name></member>
-      <member refid="class_pot_accel_1aff158a74d7328a080ed619c1456836f5" prot="private" virt="non-virtual"><scope>NoForce</scope><name>t</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda1792d3c00a41ee78957c83611fd368a2" prot="public" virt="non-virtual"><scope>NoForce</scope><name>table</name></member>
-      <member refid="class_pot_accel_1a125d7343a34d292a3e4a48a5d984cac4" prot="private" virt="non-virtual"><scope>NoForce</scope><name>td</name></member>
-      <member refid="class_pot_accel_1a86d0d012a44e2eb7c3e385d852a5fdde" prot="public" virt="non-virtual"><scope>NoForce</scope><name>thread_timing_beg</name></member>
-      <member refid="class_pot_accel_1a76c805cd8d0d134d37929eeb48115b33" prot="public" virt="non-virtual"><scope>NoForce</scope><name>thread_timing_end</name></member>
-      <member refid="class_pot_accel_1a4315e73a641c54eefc548b7d14cb06b6" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>timer_list</name></member>
-      <member refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" prot="public" virt="non-virtual"><scope>NoForce</scope><name>TList</name></member>
-      <member refid="class_pot_accel_1a0355cfe43cdde5237f7be234e94de64b" prot="public" virt="non-virtual"><scope>NoForce</scope><name>unmatched</name></member>
-      <member refid="class_pot_accel_1acd32c6464b705469911df718114187b9" prot="public" virt="non-virtual"><scope>NoForce</scope><name>use</name></member>
-      <member refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>use_external</name></member>
-      <member refid="class_pot_accel_1ae2e0dbf849707704a3d42a1fa91ce060" prot="public" virt="non-virtual"><scope>NoForce</scope><name>Used</name></member>
-      <member refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" prot="protected" virt="non-virtual"><scope>NoForce</scope><name>used</name></member>
-      <member refid="class_no_force_1a5601e2a9756b33aa0e49f0de9e4d2be6" prot="public" virt="virtual"><scope>NoForce</scope><name>~NoForce</name></member>
-      <member refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" prot="public" virt="virtual"><scope>NoForce</scope><name>~PotAccel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_o_d_e_1_1_r_k4.xml b/doxyxml/class_o_d_e_1_1_r_k4.xml
deleted file mode 100644
index 696d6cd..0000000
--- a/doxyxml/class_o_d_e_1_1_r_k4.xml
+++ /dev/null
@@ -1,119 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_o_d_e_1_1_r_k4" kind="class" language="C++" prot="public">
-    <compoundname>ODE::RK4</compoundname>
-    <includes refid="_r_k4_8_h" local="no">RK4.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="class_o_d_e_1_1_r_k4_1a4c1831b513c79dae9f41a864fe8969bc" prot="public" static="no">
-        <type>std::function&lt; <ref refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" kindref="member">Vref</ref>(double, <ref refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" kindref="member">Vref</ref>)&gt;</type>
-        <definition>using ODE::RK4::Force =  std::function&lt;Vref(double, Vref)&gt;</definition>
-        <argsstring></argsstring>
-        <name>Force</name>
-        <qualifiedname>ODE::RK4::Force</qualifiedname>
-        <briefdescription>
-<para>Functoid defintion for the force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RK4.H" line="18" column="5" bodyfile="/home/weinberg/Projects/EXP/include/RK4.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" prot="public" static="no">
-        <type>Eigen::Ref&lt; Eigen::VectorXd &gt;</type>
-        <definition>using ODE::RK4::Vref =  Eigen::Ref&lt;Eigen::VectorXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>Vref</name>
-        <qualifiedname>ODE::RK4::Vref</qualifiedname>
-        <briefdescription>
-<para>Reference to an Eigen vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RK4.H" line="15" column="5" bodyfile="/home/weinberg/Projects/EXP/include/RK4.H" bodystart="15" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" prot="private" static="no" mutable="no">
-        <type><ref refid="class_o_d_e_1_1_r_k4_1a4c1831b513c79dae9f41a864fe8969bc" kindref="member">Force</ref></type>
-        <definition>Force ODE::RK4::force</definition>
-        <argsstring></argsstring>
-        <name>force</name>
-        <qualifiedname>ODE::RK4::force</qualifiedname>
-        <briefdescription>
-<para>Force instance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RK4.H" line="23" column="11" bodyfile="/home/weinberg/Projects/EXP/include/RK4.H" bodystart="23" bodyend="-1"/>
-        <referencedby refid="class_o_d_e_1_1_r_k4_1afa6cdfcab3f9a6d0f2dc5dc135b4098e" compoundref="_r_k4_8_h" startline="31" endline="41">step</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_o_d_e_1_1_r_k4_1a6e06cf1b52091e460786791cf415e944" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>ODE::RK4::RK4</definition>
-        <argsstring>(Force force)</argsstring>
-        <name>RK4</name>
-        <qualifiedname>ODE::RK4::RK4</qualifiedname>
-        <param>
-          <type><ref refid="class_o_d_e_1_1_r_k4_1a4c1831b513c79dae9f41a864fe8969bc" kindref="member">Force</ref></type>
-          <declname>force</declname>
-        </param>
-        <briefdescription>
-<para>Constructor defining the force function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RK4.H" line="28" column="5" bodyfile="/home/weinberg/Projects/EXP/include/RK4.H" bodystart="28" bodyend="28"/>
-      </memberdef>
-      <memberdef kind="function" id="class_o_d_e_1_1_r_k4_1afa6cdfcab3f9a6d0f2dc5dc135b4098e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double ODE::RK4::step</definition>
-        <argsstring>(Vref x, double t, double dt)</argsstring>
-        <name>step</name>
-        <qualifiedname>ODE::RK4::step</qualifiedname>
-        <param>
-          <type><ref refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" kindref="member">Vref</ref></type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>dt</declname>
-        </param>
-        <briefdescription>
-<para>Take a single <ref refid="class_o_d_e_1_1_r_k4" kindref="compound">RK4</ref> step. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RK4.H" line="31" column="12" bodyfile="/home/weinberg/Projects/EXP/include/RK4.H" bodystart="31" bodyend="41"/>
-        <references refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" compoundref="_r_k4_8_h" startline="23">force</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para><ref refid="class_o_d_e_1_1_r_k4" kindref="compound">RK4</ref> takes one 4th-order Runge-Kutta step. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/RK4.H" line="9" column="3" bodyfile="/home/weinberg/Projects/EXP/include/RK4.H" bodystart="10" bodyend="42"/>
-    <listofallmembers>
-      <member refid="class_o_d_e_1_1_r_k4_1a4c1831b513c79dae9f41a864fe8969bc" prot="public" virt="non-virtual"><scope>ODE::RK4</scope><name>Force</name></member>
-      <member refid="class_o_d_e_1_1_r_k4_1ab403e249875c2b981df7b5eb64aa267e" prot="private" virt="non-virtual"><scope>ODE::RK4</scope><name>force</name></member>
-      <member refid="class_o_d_e_1_1_r_k4_1a6e06cf1b52091e460786791cf415e944" prot="public" virt="non-virtual"><scope>ODE::RK4</scope><name>RK4</name></member>
-      <member refid="class_o_d_e_1_1_r_k4_1afa6cdfcab3f9a6d0f2dc5dc135b4098e" prot="public" virt="non-virtual"><scope>ODE::RK4</scope><name>step</name></member>
-      <member refid="class_o_d_e_1_1_r_k4_1a6016923ee8d342724c3466727b073abb" prot="public" virt="non-virtual"><scope>ODE::RK4</scope><name>Vref</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_one_d_biorth.xml b/doxyxml/class_one_d_biorth.xml
deleted file mode 100644
index 913f309..0000000
--- a/doxyxml/class_one_d_biorth.xml
+++ /dev/null
@@ -1,424 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_one_d_biorth" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>OneDBiorth</compoundname>
-    <basecompoundref refid="class_biorth" prot="public" virt="non-virtual">Biorth</basecompoundref>
-    <derivedcompoundref refid="class_one_d_trig" prot="public" virt="non-virtual">OneDTrig</derivedcompoundref>
-    <includes refid="biorth1d_8_h" local="no">biorth1d.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OneDBiorth::dof</definition>
-        <argsstring></argsstring>
-        <name>dof</name>
-        <qualifiedname>OneDBiorth::dof</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="18" column="7" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="18" bodyend="-1"/>
-        <referencedby refid="class_one_d_biorth_1a492850ea00b9899b4e6b0609058d4798" compoundref="biorth1d_8_h" startline="53" endline="53">get_dof</referencedby>
-        <referencedby refid="class_one_d_biorth_1a9a6ab640327a3176156ba1185285972b" compoundref="biorth1d_8_h" startline="25" endline="25">OneDBiorth</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OneDBiorth::kx</definition>
-        <argsstring></argsstring>
-        <name>kx</name>
-        <qualifiedname>OneDBiorth::kx</qualifiedname>
-        <briefdescription>
-<para>Vertical wave number. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_one_d_biorth_1a56bae6b72ea0f8610148ace0fe9cc1e5" compoundref="biorth1d_8_h" startline="62" endline="62">reset_kx</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_one_d_biorth_1a717ed674c0b38e64c8ddb49f93f75ee5" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::d_r_to_rb</definition>
-        <argsstring>(double const)=0</argsstring>
-        <name>d_r_to_rb</name>
-        <qualifiedname>OneDBiorth::d_r_to_rb</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1a817e19c77d92480bbc23e7075a77f3bb">d_r_to_rb</reimplementedby>
-        <param>
-          <type>double const</type>
-        </param>
-        <briefdescription>
-<para>Jacobian of mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="45" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1a7ce54ca54b7d1fdebebfc9d33d8899e5" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::dens</definition>
-        <argsstring>(const int, const int, const double)=0</argsstring>
-        <name>dens</name>
-        <qualifiedname>OneDBiorth::dens</qualifiedname>
-        <reimplements refid="class_biorth_1ae6bb6919cb7f72259d5ad36946f1f088">dens</reimplements>
-        <reimplementedby refid="class_one_d_trig_1a87f04d45ce73f86b46ccd5bdd588995c">dens</reimplementedby>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>Get density basis value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="31" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1ae93f7afbc1cea06e48e52776dba8f8db" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void OneDBiorth::dens</definition>
-        <argsstring>(const int, const int, const double, Eigen::VectorXd &amp;)=0</argsstring>
-        <name>dens</name>
-        <qualifiedname>OneDBiorth::dens</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1a708a816fd858746e7a0678559d708cb4">dens</reimplementedby>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <briefdescription>
-<para>Write density basis into a vetor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="38" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1ad6f2ecad8488030f0014c76f08ebb9c8" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::get_dens</definition>
-        <argsstring>(double r, int l, Eigen::VectorXd &amp;coef)=0</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>OneDBiorth::get_dens</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1a6fa91945fa5bf0d1d58057b991a8b3b0">get_dens</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <briefdescription>
-<para>Return value of density for given coefficient vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="59" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1a492850ea00b9899b4e6b0609058d4798" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int OneDBiorth::get_dof</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_dof</name>
-        <qualifiedname>OneDBiorth::get_dof</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Number of degrees of freedom. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="53" column="7" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="53" bodyend="53"/>
-        <references refid="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" compoundref="biorth1d_8_h" startline="18">dof</references>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1a9830ba054b67c3d937cfb1a589280dbd" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::get_potl</definition>
-        <argsstring>(double r, int l, Eigen::VectorXd &amp;coef)=0</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>OneDBiorth::get_potl</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1a675aa26eb078cd958c7df931cbd3a389">get_potl</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <briefdescription>
-<para>Return value of poential for given coefficient vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="56" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1a9a6ab640327a3176156ba1185285972b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>OneDBiorth::OneDBiorth</definition>
-        <argsstring>(void)</argsstring>
-        <name>OneDBiorth</name>
-        <qualifiedname>OneDBiorth::OneDBiorth</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="25" column="3" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="25" bodyend="25"/>
-        <references refid="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" compoundref="biorth1d_8_h" startline="18">dof</references>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1a29e8b3603be9cf51b2ac0e0597fd9194" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::potl</definition>
-        <argsstring>(const int, const int, const double)=0</argsstring>
-        <name>potl</name>
-        <qualifiedname>OneDBiorth::potl</qualifiedname>
-        <reimplements refid="class_biorth_1a26e01c406def571a76990d1fc1a02b7f">potl</reimplements>
-        <reimplementedby refid="class_one_d_trig_1a250a1bbe08ff11c6c84174f152b3c4bc">potl</reimplementedby>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>Get potential basis value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="28" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1afe2e38095f8f845c2d3a2d15baef5f2e" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void OneDBiorth::potl</definition>
-        <argsstring>(const int, const int, const double, Eigen::VectorXd &amp;)=0</argsstring>
-        <name>potl</name>
-        <qualifiedname>OneDBiorth::potl</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1abe39f657af1bcac087459abef1896771">potl</reimplementedby>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const int</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <briefdescription>
-<para>Write potential basis into a vetor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="36" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1a4ec842bc4c47aa4d5a976ab9defdd227" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::r_to_rb</definition>
-        <argsstring>(double const)=0</argsstring>
-        <name>r_to_rb</name>
-        <qualifiedname>OneDBiorth::r_to_rb</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1a419be6419b012e0ce639ba6846ce64b9">r_to_rb</reimplementedby>
-        <param>
-          <type>double const</type>
-        </param>
-        <briefdescription>
-<para>Dimensional to non-dimensional coordinate map. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="43" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1ae8644eb78f3064b06b8dfc457c35587c" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::rb_max</definition>
-        <argsstring>(void)=0</argsstring>
-        <name>rb_max</name>
-        <qualifiedname>OneDBiorth::rb_max</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1a742687e9dce7bc39caf319c680062c8c">rb_max</reimplementedby>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Maximum value in non-dimensional mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="50" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1ae46ca1a70ee9e8bcfbaed70ffbaad258" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::rb_min</definition>
-        <argsstring>(void)=0</argsstring>
-        <name>rb_min</name>
-        <qualifiedname>OneDBiorth::rb_min</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1a76826d3ef15f01cc682fc262fa20f626">rb_min</reimplementedby>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Minimum value in non-dimensional mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="48" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1a40b62743370db78cfb34961324b17e7f" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDBiorth::rb_to_r</definition>
-        <argsstring>(double const)=0</argsstring>
-        <name>rb_to_r</name>
-        <qualifiedname>OneDBiorth::rb_to_r</qualifiedname>
-        <reimplementedby refid="class_one_d_trig_1ace41f6c3a124efa6cf66503a61fe4744">rb_to_r</reimplementedby>
-        <param>
-          <type>double const</type>
-        </param>
-        <briefdescription>
-<para>Non-dimensional to dimensional coordinate map. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="41" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_biorth_1a56bae6b72ea0f8610148ace0fe9cc1e5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void OneDBiorth::reset_kx</definition>
-        <argsstring>(double KX)</argsstring>
-        <name>reset_kx</name>
-        <qualifiedname>OneDBiorth::reset_kx</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>KX</declname>
-        </param>
-        <briefdescription>
-<para>Reset vertical wave number. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="62" column="8" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="62" bodyend="62"/>
-        <references refid="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" compoundref="biorth1d_8_h" startline="22">kx</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>One-dimensional biorthgonal basis. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
-      </node>
-      <node id="1">
-        <label>OneDBiorth</label>
-        <link refid="class_one_d_biorth"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>OneDTrig</label>
-        <link refid="class_one_d_trig"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
-      </node>
-      <node id="1">
-        <label>OneDBiorth</label>
-        <link refid="class_one_d_biorth"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="15" column="1" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="16" bodyend="63"/>
-    <listofallmembers>
-      <member refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" prot="public" virt="non-virtual"><scope>OneDBiorth</scope><name>BiorthID</name></member>
-      <member refid="class_biorth_1a3331c0ec9dabbed562c32c3d59c7b1bb" prot="public" virt="non-virtual"><scope>OneDBiorth</scope><name>bomb</name></member>
-      <member refid="class_one_d_biorth_1a717ed674c0b38e64c8ddb49f93f75ee5" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>d_r_to_rb</name></member>
-      <member refid="class_one_d_biorth_1a7ce54ca54b7d1fdebebfc9d33d8899e5" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>dens</name></member>
-      <member refid="class_one_d_biorth_1ae93f7afbc1cea06e48e52776dba8f8db" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>dens</name></member>
-      <member refid="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" prot="private" virt="non-virtual"><scope>OneDBiorth</scope><name>dof</name></member>
-      <member refid="class_one_d_biorth_1ad6f2ecad8488030f0014c76f08ebb9c8" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>get_dens</name></member>
-      <member refid="class_one_d_biorth_1a492850ea00b9899b4e6b0609058d4798" prot="public" virt="non-virtual"><scope>OneDBiorth</scope><name>get_dof</name></member>
-      <member refid="class_one_d_biorth_1a9830ba054b67c3d937cfb1a589280dbd" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>get_potl</name></member>
-      <member refid="class_biorth_1a732367609f458cf4128bb37f2641c30b" prot="public" virt="non-virtual"><scope>OneDBiorth</scope><name>id</name></member>
-      <member refid="class_biorth_1a582200336065fac43a3282ee0671cffb" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>krnl</name></member>
-      <member refid="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" prot="public" virt="non-virtual"><scope>OneDBiorth</scope><name>kx</name></member>
-      <member refid="class_biorth_1a4997a44fb308362868547f4eb0f23c5a" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>norm</name></member>
-      <member refid="class_one_d_biorth_1a9a6ab640327a3176156ba1185285972b" prot="public" virt="non-virtual"><scope>OneDBiorth</scope><name>OneDBiorth</name></member>
-      <member refid="class_one_d_biorth_1a29e8b3603be9cf51b2ac0e0597fd9194" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>potl</name></member>
-      <member refid="class_one_d_biorth_1afe2e38095f8f845c2d3a2d15baef5f2e" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>potl</name></member>
-      <member refid="class_one_d_biorth_1a4ec842bc4c47aa4d5a976ab9defdd227" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>r_to_rb</name></member>
-      <member refid="class_one_d_biorth_1ae8644eb78f3064b06b8dfc457c35587c" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>rb_max</name></member>
-      <member refid="class_one_d_biorth_1ae46ca1a70ee9e8bcfbaed70ffbaad258" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>rb_min</name></member>
-      <member refid="class_one_d_biorth_1a40b62743370db78cfb34961324b17e7f" prot="public" virt="pure-virtual"><scope>OneDBiorth</scope><name>rb_to_r</name></member>
-      <member refid="class_one_d_biorth_1a56bae6b72ea0f8610148ace0fe9cc1e5" prot="public" virt="non-virtual"><scope>OneDBiorth</scope><name>reset_kx</name></member>
-      <member refid="class_biorth_1a83c4824d7003048794102f54152cfdbc" prot="public" virt="virtual"><scope>OneDBiorth</scope><name>~Biorth</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_one_d_model.xml b/doxyxml/class_one_d_model.xml
deleted file mode 100644
index 8a8e73c..0000000
--- a/doxyxml/class_one_d_model.xml
+++ /dev/null
@@ -1,473 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_one_d_model" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>OneDModel</compoundname>
-    <basecompoundref refid="class_mass_model" prot="public" virt="non-virtual">MassModel</basecompoundref>
-    <derivedcompoundref refid="class_one_d_model_table" prot="public" virt="non-virtual">OneDModelTable</derivedcompoundref>
-    <derivedcompoundref refid="class_sech2" prot="public" virt="non-virtual">Sech2</derivedcompoundref>
-    <derivedcompoundref refid="class_sech2mu" prot="public" virt="non-virtual">Sech2mu</derivedcompoundref>
-    <includes refid="massmodel1d_8_h" local="no">massmodel1d.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" prot="public" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OneDModel::dist_defined</definition>
-        <argsstring></argsstring>
-        <name>dist_defined</name>
-        <qualifiedname>OneDModel::dist_defined</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="15" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" bodystart="15" bodyend="-1"/>
-        <referencedby refid="class_sech2_1a281c9e020d54ea5cc4122c79c99065a9" compoundref="massmodel1d_8_h" startline="142" endline="152">Sech2::Sech2</referencedby>
-        <referencedby refid="class_sech2_1a1d67a0da8b078b168e3bb3a13a649271" compoundref="massmodel1d_8_h" startline="130" endline="140">Sech2::Sech2</referencedby>
-        <referencedby refid="class_sech2_halo_1a8fa1bcf5d0600b81454bff6fbdfe18d1" compoundref="massmodel1d_8_h" startline="376" endline="384">Sech2Halo::Sech2Halo</referencedby>
-        <referencedby refid="class_sech2mu_1a235547f97216c8f93b4707319bbd7f1b" compoundref="massmodel1d_8_h" startline="261" endline="274">Sech2mu::Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1a4586a05af366e649ec20626de2b5bc4a" compoundref="massmodel1d_8_h" startline="246" endline="259">Sech2mu::Sech2mu</referencedby>
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-        <type>double</type>
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-        <qualifiedname>OneDModel::dfde</qualifiedname>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>const double</type>
-          <declname>V</declname>
-          <defval>0.0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
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-        <name>dfdv</name>
-        <qualifiedname>OneDModel::dfdv</qualifiedname>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>const double</type>
-          <declname>V</declname>
-          <defval>0.0</defval>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>const double</type>
-          <declname>V</declname>
-          <defval>0.0</defval>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="43" column="18"/>
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-        <type>double</type>
-        <definition>double OneDModel::get_density</definition>
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-        <name>get_density</name>
-        <qualifiedname>OneDModel::get_density</qualifiedname>
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-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The density at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="31" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" bodystart="31" bodyend="32"/>
-        <references refid="class_one_d_model_1a36bf5a5421bcb001b7cbb098b333a22f">get_density</references>
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-        <type>double</type>
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-        <name>get_density</name>
-        <qualifiedname>OneDModel::get_density</qualifiedname>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>virtual double OneDModel::get_dpot</definition>
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-        <name>get_dpot</name>
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-        <param>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="22" column="18"/>
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-      <memberdef kind="function" id="class_one_d_model_1ae49154b0d0be811cf708c722e56fcbad" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OneDModel::get_dpot2</definition>
-        <argsstring>(const double)=0</argsstring>
-        <name>get_dpot2</name>
-        <qualifiedname>OneDModel::get_dpot2</qualifiedname>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="23" column="18"/>
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-        <type>double</type>
-        <definition>double OneDModel::get_mass</definition>
-        <argsstring>(const double x, const double y, const double z)</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>OneDModel::get_mass</qualifiedname>
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-        <param>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>const double</type>
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-        </briefdescription>
-        <detaileddescription>
-<para>Get the mass inside of position (x, y, z) (this is ambiguous in general and will depend on the model) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="28" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" bodystart="28" bodyend="29"/>
-        <references refid="class_one_d_model_1aa4b6d3af73f6b25cf2f778c1968b0d18">get_mass</references>
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-        <type>double</type>
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-        <name>get_mass</name>
-        <qualifiedname>OneDModel::get_mass</qualifiedname>
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-        </inbodydescription>
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-        </inbodydescription>
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-        <type>double</type>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>double OneDModel::get_pot</definition>
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-        <name>get_pot</name>
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-          <type>const double</type>
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-<para>The potential at (x, y, z) </para>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <qualifiedname>OneDModel::get_pot_dpot</qualifiedname>
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-        <type>double</type>
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-        <inbodydescription>
-        </inbodydescription>
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diff --git a/doxyxml/class_one_d_model_table.xml b/doxyxml/class_one_d_model_table.xml
deleted file mode 100644
index 7327965..0000000
--- a/doxyxml/class_one_d_model_table.xml
+++ /dev/null
@@ -1,547 +0,0 @@
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diff --git a/doxyxml/class_one_d_trig.xml b/doxyxml/class_one_d_trig.xml
deleted file mode 100644
index ac1c2f1..0000000
--- a/doxyxml/class_one_d_trig.xml
+++ /dev/null
@@ -1,729 +0,0 @@
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-        <definition>double OneDTrig::zmax</definition>
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-        <name>zmax</name>
-        <qualifiedname>OneDTrig::zmax</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="69" column="10" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="69" bodyend="-1"/>
-        <referencedby refid="class_one_d_trig_1a742687e9dce7bc39caf319c680062c8c" compoundref="biorth1d_8_h" startline="129" endline="129">rb_max</referencedby>
-        <referencedby refid="class_one_d_trig_1a76826d3ef15f01cc682fc262fa20f626" compoundref="biorth1d_8_h" startline="126" endline="126">rb_min</referencedby>
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-        <type>double</type>
-        <definition>double OneDTrig::KSTOL</definition>
-        <argsstring></argsstring>
-        <name>KSTOL</name>
-        <qualifiedname>OneDTrig::KSTOL</qualifiedname>
-        <briefdescription>
-<para>Enpoint offset for root finding (small) </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="79" column="17" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="79" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double OneDTrig::KSZTOL</definition>
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-        <name>KSZTOL</name>
-        <qualifiedname>OneDTrig::KSZTOL</qualifiedname>
-        <briefdescription>
-<para>Root finding tolerance (small) </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void OneDTrig::compute_kstar</definition>
-        <argsstring>(int n)</argsstring>
-        <name>compute_kstar</name>
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-          <type>int</type>
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-        </detaileddescription>
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-        <type>void</type>
-        <definition>void OneDTrig::compute_norm</definition>
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-        <name>compute_norm</name>
-        <qualifiedname>OneDTrig::compute_norm</qualifiedname>
-        <param>
-          <type>void</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <type>double</type>
-        <definition>double OneDTrig::d_r_to_rb</definition>
-        <argsstring>(double const x)</argsstring>
-        <name>d_r_to_rb</name>
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-        <param>
-          <type>double const</type>
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-        <briefdescription>
-<para>Jacobian for non-dimensional mapping. </para>
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-        <type>double</type>
-        <definition>double OneDTrig::dens</definition>
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-        <name>dens</name>
-        <qualifiedname>OneDTrig::dens</qualifiedname>
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-        <param>
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-        <param>
-          <type>const double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Get density value for basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="100" column="10"/>
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-        <name>dens</name>
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-        <param>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>vec</declname>
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-        <briefdescription>
-<para>Return density basis in a vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="111" column="8"/>
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-        <type>double</type>
-        <definition>double OneDTrig::force</definition>
-        <argsstring>(const int n, const int tmp, const double z)</argsstring>
-        <name>force</name>
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-          <type>const int</type>
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-        <param>
-          <type>const int</type>
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-        <param>
-          <type>const double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Get force value for basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="103" column="10"/>
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-        <name>force</name>
-        <qualifiedname>OneDTrig::force</qualifiedname>
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-          <type>const int</type>
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-        <param>
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-        <param>
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-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>vec</declname>
-        </param>
-        <briefdescription>
-<para>Return force basis in a vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="114" column="8"/>
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-        <type>double</type>
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-        <param>
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-        <param>
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-        <briefdescription>
-<para>Return density field for given coefficient vector. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="141" column="10"/>
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-        <type>double</type>
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-        <name>get_force</name>
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-        <param>
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-        <param>
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-        <briefdescription>
-<para>Return force field for given coefficient vector. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="144" column="10"/>
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-        <type>double</type>
-        <definition>double OneDTrig::get_potl</definition>
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-        <name>get_potl</name>
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-        <param>
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-        <param>
-          <type>int</type>
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-        <param>
-          <type>Eigen::VectorXd &amp;</type>
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-        </param>
-        <briefdescription>
-<para>Return potential field for given coefficient vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="138" column="10"/>
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-        <type>double</type>
-        <definition>double OneDTrig::krnl</definition>
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-        <name>krnl</name>
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-        <param>
-          <type>int</type>
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-        <param>
-          <type>int</type>
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-          <defval>0</defval>
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-        <briefdescription>
-<para>Kernel value. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="132" column="10" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="132" bodyend="132"/>
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-        <type>double</type>
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-        <param>
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-        <briefdescription>
-<para>Norm value. </para>
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-        <detaileddescription>
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-<para>Constructor. </para>
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-<para>Constructor. </para>
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-<para>Constructor. </para>
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-        <param>
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-        <param>
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-        <briefdescription>
-<para>Get potential value for basis. </para>
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-        <name>potl</name>
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-        <param>
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-        <param>
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-        <param>
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-        <briefdescription>
-<para>Return potential basis in a vector. </para>
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-        <detaileddescription>
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-        <param>
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-        <briefdescription>
-<para>Dimensional to non-dimensional mapping. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <type>double</type>
-        <definition>double OneDTrig::rb_max</definition>
-        <argsstring>(void)</argsstring>
-        <name>rb_max</name>
-        <qualifiedname>OneDTrig::rb_max</qualifiedname>
-        <reimplements refid="class_one_d_biorth_1ae8644eb78f3064b06b8dfc457c35587c">rb_max</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Maximum value in non-dimensional mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="129" column="10" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="129" bodyend="129"/>
-        <references refid="class_one_d_trig_1af54ca2800edd3d6f37947eedc82e5b9a" compoundref="biorth1d_8_h" startline="69">zmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_trig_1a76826d3ef15f01cc682fc262fa20f626" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double OneDTrig::rb_min</definition>
-        <argsstring>(void)</argsstring>
-        <name>rb_min</name>
-        <qualifiedname>OneDTrig::rb_min</qualifiedname>
-        <reimplements refid="class_one_d_biorth_1ae46ca1a70ee9e8bcfbaed70ffbaad258">rb_min</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Minimum value in non-dimensional mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="126" column="10" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="126" bodyend="126"/>
-        <references refid="class_one_d_trig_1af54ca2800edd3d6f37947eedc82e5b9a" compoundref="biorth1d_8_h" startline="69">zmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_trig_1ace41f6c3a124efa6cf66503a61fe4744" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double OneDTrig::rb_to_r</definition>
-        <argsstring>(double const x)</argsstring>
-        <name>rb_to_r</name>
-        <qualifiedname>OneDTrig::rb_to_r</qualifiedname>
-        <reimplements refid="class_one_d_biorth_1a40b62743370db78cfb34961324b17e7f">rb_to_r</reimplements>
-        <param>
-          <type>double const</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Non-dimensional to dimensional mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="117" column="10" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="117" bodyend="117"/>
-      </memberdef>
-      <memberdef kind="function" id="class_one_d_trig_1a93bc2f6100b8807addabd68b97c09522" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OneDTrig::reset</definition>
-        <argsstring>(double KX, double ZMAX)</argsstring>
-        <name>reset</name>
-        <qualifiedname>OneDTrig::reset</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>KX</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>ZMAX</declname>
-        </param>
-        <briefdescription>
-<para>Reset grid with new parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="94" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para><ref refid="class_basis" kindref="compound">Basis</ref> based on trigonometric functions in vertical direction. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="3">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
-      </node>
-      <node id="2">
-        <label>OneDBiorth</label>
-        <link refid="class_one_d_biorth"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>OneDTrig</label>
-        <link refid="class_one_d_trig"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="3">
-        <label>Biorth</label>
-        <link refid="class_biorth"/>
-      </node>
-      <node id="2">
-        <label>OneDBiorth</label>
-        <link refid="class_one_d_biorth"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>OneDTrig</label>
-        <link refid="class_one_d_trig"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/biorth1d.H" line="66" column="1" bodyfile="/home/weinberg/Projects/EXP/include/biorth1d.H" bodystart="67" bodyend="146"/>
-    <listofallmembers>
-      <member refid="class_biorth_1a2e936fa39b497ab4f2316f7b6bd2f226" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>BiorthID</name></member>
-      <member refid="class_biorth_1a3331c0ec9dabbed562c32c3d59c7b1bb" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>bomb</name></member>
-      <member refid="class_one_d_trig_1a84d8f38355ae31f82f23b32ad4556273" prot="private" virt="non-virtual"><scope>OneDTrig</scope><name>cnorm</name></member>
-      <member refid="class_one_d_trig_1a8ccd656b950f516f0c332fdd6dd4c326" prot="private" virt="non-virtual"><scope>OneDTrig</scope><name>compute_kstar</name></member>
-      <member refid="class_one_d_trig_1a57e74bc56fa6fce37126e7e982e6810a" prot="private" virt="non-virtual"><scope>OneDTrig</scope><name>compute_norm</name></member>
-      <member refid="class_one_d_trig_1a817e19c77d92480bbc23e7075a77f3bb" prot="public" virt="virtual"><scope>OneDTrig</scope><name>d_r_to_rb</name></member>
-      <member refid="class_one_d_trig_1a87f04d45ce73f86b46ccd5bdd588995c" prot="public" virt="virtual"><scope>OneDTrig</scope><name>dens</name></member>
-      <member refid="class_one_d_trig_1a708a816fd858746e7a0678559d708cb4" prot="public" virt="virtual"><scope>OneDTrig</scope><name>dens</name></member>
-      <member refid="class_one_d_biorth_1af70cf7ccaf62402fd4e606f411c7dc67" prot="private" virt="non-virtual"><scope>OneDTrig</scope><name>dof</name></member>
-      <member refid="class_one_d_trig_1a419ec201c2dea8528cfbbfe00b37cd9f" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>force</name></member>
-      <member refid="class_one_d_trig_1a2a97b229da816e9a601f4e125bad3f36" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>force</name></member>
-      <member refid="class_one_d_trig_1a6fa91945fa5bf0d1d58057b991a8b3b0" prot="public" virt="virtual"><scope>OneDTrig</scope><name>get_dens</name></member>
-      <member refid="class_one_d_biorth_1a492850ea00b9899b4e6b0609058d4798" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>get_dof</name></member>
-      <member refid="class_one_d_trig_1ae739f0f717dd99659f65e62d8dac9863" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>get_force</name></member>
-      <member refid="class_one_d_trig_1a675aa26eb078cd958c7df931cbd3a389" prot="public" virt="virtual"><scope>OneDTrig</scope><name>get_potl</name></member>
-      <member refid="class_biorth_1a732367609f458cf4128bb37f2641c30b" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>id</name></member>
-      <member refid="class_one_d_trig_1ab2b00dbd4549468867e1fca91b447402" prot="private" virt="non-virtual"><scope>OneDTrig</scope><name>kbstar</name></member>
-      <member refid="class_one_d_trig_1a59373b367c6c4d2765689ffecd94cbcb" prot="public" virt="virtual"><scope>OneDTrig</scope><name>krnl</name></member>
-      <member refid="class_one_d_trig_1a8da612ad8591e3691d76cf4e075377c5" prot="private" virt="non-virtual"><scope>OneDTrig</scope><name>kstar</name></member>
-      <member refid="class_one_d_trig_1a6ae4302558d448f659ec72e9d9a1ff82" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>KSTOL</name></member>
-      <member refid="class_one_d_trig_1ab16221dba5b6efadd6b5cb78431cfbed" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>KSZTOL</name></member>
-      <member refid="class_one_d_biorth_1a55f1ed49d0ff2061da9879eecbc969ef" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>kx</name></member>
-      <member refid="class_one_d_trig_1a2185b5d71ebe7a8f9863c7f833dfb7ba" prot="public" virt="virtual"><scope>OneDTrig</scope><name>norm</name></member>
-      <member refid="class_one_d_trig_1a85c72d31cfbbc15cb26764c91ce2c98d" prot="private" virt="non-virtual"><scope>OneDTrig</scope><name>nrmax</name></member>
-      <member refid="class_one_d_biorth_1a9a6ab640327a3176156ba1185285972b" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>OneDBiorth</name></member>
-      <member refid="class_one_d_trig_1a144a07e79ca2f4c7c77953c84fe9ca44" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>OneDTrig</name></member>
-      <member refid="class_one_d_trig_1abcdec9acb2b9cb1c7c67cd983a635d1e" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>OneDTrig</name></member>
-      <member refid="class_one_d_trig_1a334f263fccfba76f3f64c11873bc869c" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>OneDTrig</name></member>
-      <member refid="class_one_d_trig_1a250a1bbe08ff11c6c84174f152b3c4bc" prot="public" virt="virtual"><scope>OneDTrig</scope><name>potl</name></member>
-      <member refid="class_one_d_trig_1abe39f657af1bcac087459abef1896771" prot="public" virt="virtual"><scope>OneDTrig</scope><name>potl</name></member>
-      <member refid="class_one_d_trig_1a419be6419b012e0ce639ba6846ce64b9" prot="public" virt="virtual"><scope>OneDTrig</scope><name>r_to_rb</name></member>
-      <member refid="class_one_d_trig_1a742687e9dce7bc39caf319c680062c8c" prot="public" virt="virtual"><scope>OneDTrig</scope><name>rb_max</name></member>
-      <member refid="class_one_d_trig_1a76826d3ef15f01cc682fc262fa20f626" prot="public" virt="virtual"><scope>OneDTrig</scope><name>rb_min</name></member>
-      <member refid="class_one_d_trig_1ace41f6c3a124efa6cf66503a61fe4744" prot="public" virt="virtual"><scope>OneDTrig</scope><name>rb_to_r</name></member>
-      <member refid="class_one_d_trig_1a93bc2f6100b8807addabd68b97c09522" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>reset</name></member>
-      <member refid="class_one_d_biorth_1a56bae6b72ea0f8610148ace0fe9cc1e5" prot="public" virt="non-virtual"><scope>OneDTrig</scope><name>reset_kx</name></member>
-      <member refid="class_one_d_trig_1af54ca2800edd3d6f37947eedc82e5b9a" prot="private" virt="non-virtual"><scope>OneDTrig</scope><name>zmax</name></member>
-      <member refid="class_biorth_1a83c4824d7003048794102f54152cfdbc" prot="public" virt="virtual"><scope>OneDTrig</scope><name>~Biorth</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_orb_trace.xml b/doxyxml/class_orb_trace.xml
deleted file mode 100644
index c573cfe..0000000
--- a/doxyxml/class_orb_trace.xml
+++ /dev/null
@@ -1,527 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_orb_trace" kind="class" language="C++" prot="public">
-    <compoundname>OrbTrace</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_orb_trace_8_h" local="no">OrbTrace.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_orb_trace_1a4904b82695586154193df5b0f6129813" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OrbTrace::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OrbTrace::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="36" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1a9779dc75badc9fd5b2b044ba4f218623" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OrbTrace::flags</definition>
-        <argsstring></argsstring>
-        <name>flags</name>
-        <qualifiedname>OrbTrace::flags</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="49" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="49" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1a836db57c795ff64325f6f016249fb801" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OrbTrace::local</definition>
-        <argsstring></argsstring>
-        <name>local</name>
-        <qualifiedname>OrbTrace::local</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="44" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1acc7654d19c49c359053e496b0593c6f6" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OrbTrace::nbeg</definition>
-        <argsstring></argsstring>
-        <name>nbeg</name>
-        <qualifiedname>OrbTrace::nbeg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="38" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1a193d912a01938bb111c04daee5131598" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OrbTrace::nbuf</definition>
-        <argsstring></argsstring>
-        <name>nbuf</name>
-        <qualifiedname>OrbTrace::nbuf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="48" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1abf316253b26847e999d98d0a8d0ff04a" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OrbTrace::norb</definition>
-        <argsstring></argsstring>
-        <name>norb</name>
-        <qualifiedname>OrbTrace::norb</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="40" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="40" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1a0a0b568e0454aeb89a05f97a543e5e3e" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OrbTrace::nskip</definition>
-        <argsstring></argsstring>
-        <name>nskip</name>
-        <qualifiedname>OrbTrace::nskip</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="39" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1afc27d67b14b6848651f7945db5a12a3d" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OrbTrace::orbitlist</definition>
-        <argsstring></argsstring>
-        <name>orbitlist</name>
-        <qualifiedname>OrbTrace::orbitlist</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="37" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1a56daf771e7356b67c8d6639de918637e" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; int &gt;</type>
-        <definition>std::vector&lt;int&gt; OrbTrace::orblist</definition>
-        <argsstring></argsstring>
-        <name>orblist</name>
-        <qualifiedname>OrbTrace::orblist</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="46" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1a8213236086651a4f9574c91b1c75e098" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; OrbTrace::pbuf</definition>
-        <argsstring></argsstring>
-        <name>pbuf</name>
-        <qualifiedname>OrbTrace::pbuf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="47" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="47" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1a83edfa294246b0a4cd87a2cd1d34f534" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrbTrace::prev</definition>
-        <argsstring></argsstring>
-        <name>prev</name>
-        <qualifiedname>OrbTrace::prev</qualifiedname>
-        <initializer>= -std::numeric_limits&lt;double&gt;::max()</initializer>
-        <briefdescription>
-<para>Last output time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="57" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="57" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1a7e25ecf48de34e047dfd4b5c361afd5c" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* OrbTrace::tcomp</definition>
-        <argsstring></argsstring>
-        <name>tcomp</name>
-        <qualifiedname>OrbTrace::tcomp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="45" column="13" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="45" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_orb_trace_1af4fcce1c4fd3ec56be003324de2ce5cf" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OrbTrace::use_acc</definition>
-        <argsstring></argsstring>
-        <name>use_acc</name>
-        <qualifiedname>OrbTrace::use_acc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OrbTrace::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="54" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="54" bodyend="-1"/>
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-        <param>
-          <type>const YAML::Node &amp;</type>
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-<para>Constructor. </para>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="62" column="3"/>
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-        <type>void</type>
-        <definition>void OrbTrace::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OrbTrace::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Generate the output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current multistep level to decide whether or not to dump multisteps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="72" column="8"/>
-      </memberdef>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Log norb orbits at each interval</para>
-<para>For best efficiency, particles to be traced should be on the root process.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>norb</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of orbits per node to follow</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nbeg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the offset in the bodies list for the first particle to trace.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nskip</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the interval between orbits beginning with nskip. If nskip is unspecified, <computeroutput>nskip=nbodies/norb</computeroutput>.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the frequency between file updates</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>use_acc</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>to output the acceleration</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>use_pot</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>to output the potential</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>use_lev</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>to output the multistep level</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>orbitlist</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the list of particle numbers to trace</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>name</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>of the component to trace </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
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-      <node id="1">
-        <label>OrbTrace</label>
-        <link refid="class_orb_trace"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="4">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="1">
-        <label>OrbTrace</label>
-        <link refid="class_orb_trace"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>tcomp</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="8" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="6">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OrbTrace.H" line="31" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OrbTrace.H" bodystart="32" bodyend="74"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OrbTrace</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OrbTrace</scope><name>current_keys</name></member>
-      <member refid="class_orb_trace_1a4904b82695586154193df5b0f6129813" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>filename</name></member>
-      <member refid="class_orb_trace_1a9779dc75badc9fd5b2b044ba4f218623" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>flags</name></member>
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-      <member refid="class_orb_trace_1afc27d67b14b6848651f7945db5a12a3d" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>orbitlist</name></member>
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-      <member refid="class_orb_trace_1a8213236086651a4f9574c91b1c75e098" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>pbuf</name></member>
-      <member refid="class_orb_trace_1a83edfa294246b0a4cd87a2cd1d34f534" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>prev</name></member>
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-      <member refid="class_orb_trace_1af4fcce1c4fd3ec56be003324de2ce5cf" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>use_acc</name></member>
-      <member refid="class_orb_trace_1afd7bb20f6d3544e374c74ca048dccdaa" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>use_lev</name></member>
-      <member refid="class_orb_trace_1a366b9fbd3ef9d63a214b55478ad6d2cc" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>use_pot</name></member>
-      <member refid="class_orb_trace_1a58efd5f23f71863e2c18213fdd250d88" prot="private" virt="non-virtual"><scope>OrbTrace</scope><name>valid_keys</name></member>
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-    </listofallmembers>
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diff --git a/doxyxml/class_orient.xml b/doxyxml/class_orient.xml
deleted file mode 100644
index ecdfa24..0000000
--- a/doxyxml/class_orient.xml
+++ /dev/null
@@ -1,1279 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_orient" kind="class" language="C++" prot="public">
-    <compoundname>Orient</compoundname>
-    <includes refid="_orient_8_h" local="no">Orient.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="enum" id="class_orient_1ab5d37af72a85b76b2227627b490116f2" prot="public" static="no" strong="no">
-        <type></type>
-        <name>ControlFlags</name>
-        <qualifiedname>Orient::ControlFlags</qualifiedname>
-        <enumvalue id="class_orient_1ab5d37af72a85b76b2227627b490116f2a9bea29023577cfecab897fb1bf4efea4" prot="public">
-          <name>DIAG</name>
-          <initializer>=1</initializer>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_orient_1ab5d37af72a85b76b2227627b490116f2a56390961a62625218e91702d63bbf041" prot="public">
-          <name>KE</name>
-          <initializer>=2</initializer>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_orient_1ab5d37af72a85b76b2227627b490116f2aae9a4f491c8a858c01522c38c0fb6e86" prot="public">
-          <name>EXTERNAL</name>
-          <initializer>=4</initializer>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-<para>Mask flags for <ref refid="class_orient" kindref="compound">Orient</ref> behavior. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="131" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="131" bodyend="131"/>
-      </memberdef>
-      <memberdef kind="enum" id="class_orient_1ac11a69e8024f1092460e9f969d273596" prot="public" static="no" strong="no">
-        <type></type>
-        <name>OrientFlags</name>
-        <qualifiedname>Orient::OrientFlags</qualifiedname>
-        <enumvalue id="class_orient_1ac11a69e8024f1092460e9f969d273596a238ddc83b278efbb4d2696b60a8a7059" prot="public">
-          <name>AXIS</name>
-          <initializer>=1</initializer>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_orient_1ac11a69e8024f1092460e9f969d273596a5bc52ef920db5ed1929af96ce023dacb" prot="public">
-          <name>CENTER</name>
-          <initializer>=2</initializer>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-<para>Mask flags for <ref refid="class_orient" kindref="compound">Orient</ref> type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="128" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="128" bodyend="128"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_orient_1a5bfc70c0f60da8df19a7f4dd83575d0d" prot="private" static="no">
-        <type>pair&lt; double, Eigen::VectorXd &gt;</type>
-        <definition>typedef pair&lt;double, Eigen::VectorXd&gt; Orient::DV</definition>
-        <argsstring></argsstring>
-        <name>DV</name>
-        <qualifiedname>Orient::DV</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="91" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="91" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_orient_1aae522c2f57d3dc55cfc623af0eb95f33" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_pseudo_accel" kindref="compound">PseudoAccel</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;PseudoAccel&gt; Orient::accel</definition>
-        <argsstring></argsstring>
-        <name>accel</name>
-        <qualifiedname>Orient::accel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="119" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="119" bodyend="-1"/>
-        <referencedby refid="class_orient_1a2aaecf7e96749b9f1f89b61a6f1218f7" compoundref="_orient_8_h" startline="179" endline="184">currentAccel</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_orient_1a32063926f65bbdf3fb80d0b3834fab66" prot="private" static="no" mutable="no">
-        <type>set&lt; <ref refid="class_e_l3" kindref="compound">EL3</ref>, <ref refid="structlt_e_l3" kindref="compound">ltEL3</ref> &gt;</type>
-        <definition>set&lt;EL3, ltEL3&gt; Orient::angm</definition>
-        <argsstring></argsstring>
-        <name>angm</name>
-        <qualifiedname>Orient::angm</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="100" column="53" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="100" bodyend="-1"/>
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-        <qualifiedname>Orient::Ecurr</qualifiedname>
-        <briefdescription>
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-        <qualifiedname>Orient::Elast</qualifiedname>
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-        <name>sigCz</name>
-        <qualifiedname>Orient::sigCz</qualifiedname>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <referencedby refid="class_orient_1afbffdea19192fa3d6aec41469ff2eafd" compoundref="_orient_8_h" startline="193" endline="193">currentCenterVarZ</referencedby>
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-      <memberdef kind="variable" id="class_orient_1a7204a57eb72da10e184c6a73237f0ca8" prot="private" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Orient::slope</definition>
-        <argsstring></argsstring>
-        <name>slope</name>
-        <qualifiedname>Orient::slope</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="105" column="36" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="105" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1a52a52d397aba95defaf4829ad3140538" prot="private" static="no" mutable="no">
-        <type>deque&lt; <ref refid="class_orient_1a5bfc70c0f60da8df19a7f4dd83575d0d" kindref="member">DV</ref> &gt;</type>
-        <definition>deque&lt;DV&gt; Orient::sumsA</definition>
-        <argsstring></argsstring>
-        <name>sumsA</name>
-        <qualifiedname>Orient::sumsA</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="96" column="9" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="96" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1a7e5d32fea9e37b494d3c996abb7df986" prot="private" static="no" mutable="no">
-        <type>deque&lt; <ref refid="class_orient_1a5bfc70c0f60da8df19a7f4dd83575d0d" kindref="member">DV</ref> &gt;</type>
-        <definition>deque&lt;DV&gt; Orient::sumsC</definition>
-        <argsstring></argsstring>
-        <name>sumsC</name>
-        <qualifiedname>Orient::sumsC</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="96" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="96" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1a0e96e1d64b6f52362af01357a51d0de3" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Orient::sumX</definition>
-        <argsstring></argsstring>
-        <name>sumX</name>
-        <qualifiedname>Orient::sumX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="104" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="104" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1a789c5fcb61ec7da8f4a2040b9f8241c5" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Orient::sumX2</definition>
-        <argsstring></argsstring>
-        <name>sumX2</name>
-        <qualifiedname>Orient::sumX2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="104" column="15" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="104" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1abc44b1ed2fa6a15076a736061efc225d" prot="private" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Orient::sumXY</definition>
-        <argsstring></argsstring>
-        <name>sumXY</name>
-        <qualifiedname>Orient::sumXY</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="105" column="30" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="105" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1a88d781162d0d60aa0e532d2dc218b092" prot="private" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Orient::sumY</definition>
-        <argsstring></argsstring>
-        <name>sumY</name>
-        <qualifiedname>Orient::sumY</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="105" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="105" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1ad27fd08445ab1bff8d12a580980fe23b" prot="private" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Orient::sumY2</definition>
-        <argsstring></argsstring>
-        <name>sumY2</name>
-        <qualifiedname>Orient::sumY2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="105" column="24" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="105" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1a8790d2a2606f0756386cfa61e6c771ec" prot="private" static="no" mutable="no">
-        <type><ref refid="class_e_l3" kindref="compound">EL3</ref></type>
-        <definition>EL3 Orient::t</definition>
-        <argsstring></argsstring>
-        <name>t</name>
-        <qualifiedname>Orient::t</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="94" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="94" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_orient_1afdb91c183fd364fe2991af75abef823c" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Orient::used</definition>
-        <argsstring></argsstring>
-        <name>used</name>
-        <qualifiedname>Orient::used</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="108" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="108" bodyend="-1"/>
-        <referencedby refid="class_orient_1a5e862e1a3a6efd39c0b28df031b6261d" compoundref="_orient_8_h" startline="196" endline="196">currentUsed</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_orient_1a37a9fae59c55d4e4a808f7b69ac634b9" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; Orient::vel</definition>
-        <argsstring></argsstring>
-        <name>vel</name>
-        <qualifiedname>Orient::vel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="117" column="23" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="117" bodyend="-1"/>
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-    </sectiondef>
-    <sectiondef kind="private-func">
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-        <type>void</type>
-        <definition>void Orient::accumulate_cpu</definition>
-        <argsstring>(double time, Component *c)</argsstring>
-        <name>accumulate_cpu</name>
-        <qualifiedname>Orient::accumulate_cpu</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>time</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="121" column="8"/>
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-        <type>void</type>
-        <definition>void Orient::accumulate</definition>
-        <argsstring>(double time, Component *c)</argsstring>
-        <name>accumulate</name>
-        <qualifiedname>Orient::accumulate</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>time</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>Register phase space of <emphasis>num</emphasis> particles and store angular momentum vector for the lowest <emphasis>many</emphasis> binding energies. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="162" column="8"/>
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-      <memberdef kind="function" id="class_orient_1a2aaecf7e96749b9f1f89b61a6f1218f7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>const std::tuple&lt; Eigen::Vector3d &amp;, Eigen::Vector3d &amp;, Eigen::Vector3d &amp; &gt;</type>
-        <definition>const std::tuple&lt; Eigen::Vector3d &amp;, Eigen::Vector3d &amp;, Eigen::Vector3d &amp; &gt; Orient::currentAccel</definition>
-        <argsstring>(void)</argsstring>
-        <name>currentAccel</name>
-        <qualifiedname>Orient::currentAccel</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Return current pseudo force, angular velocity, and angular velocity derivative </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="179" column="3" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="179" bodyend="184"/>
-        <references refid="class_orient_1aae522c2f57d3dc55cfc623af0eb95f33" compoundref="_orient_8_h" startline="119">accel</references>
-        <references refid="class_orient_1a92e4cf917f9bc05b829012aa70ec173c" compoundref="_orient_8_h" startline="101">pseudo</references>
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-        <type>Eigen::Vector3d &amp;</type>
-        <definition>Eigen::Vector3d &amp; Orient::currentAxis</definition>
-        <argsstring>(void)</argsstring>
-        <name>currentAxis</name>
-        <qualifiedname>Orient::currentAxis</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return current axis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="171" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="171" bodyend="171"/>
-        <references refid="class_orient_1ab517af8a0cade5f03a44dd47c663a6e2" compoundref="_orient_8_h" startline="100">axis</references>
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-        <type>double</type>
-        <definition>double Orient::currentAxisVar</definition>
-        <argsstring>(void)</argsstring>
-        <name>currentAxisVar</name>
-        <qualifiedname>Orient::currentAxisVar</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return variance of axis determination (linear least squares solution) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="187" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="187" bodyend="187"/>
-        <references refid="class_orient_1a608f69f374c8506493118fd078a686de" compoundref="_orient_8_h" startline="106">sigA</references>
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-        <type>Eigen::Vector3d &amp;</type>
-        <definition>Eigen::Vector3d &amp; Orient::currentCenter</definition>
-        <argsstring>(void)</argsstring>
-        <name>currentCenter</name>
-        <qualifiedname>Orient::currentCenter</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return current center. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="174" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="174" bodyend="174"/>
-        <references refid="class_orient_1a0e0c27e1f35f0156e18febc3b6bbd2e4" compoundref="_orient_8_h" startline="100">center</references>
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-      <memberdef kind="function" id="class_orient_1a63dc5d8f5cd59b45eb91ff2960c2760c" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Orient::currentCenterVar</definition>
-        <argsstring>(void)</argsstring>
-        <name>currentCenterVar</name>
-        <qualifiedname>Orient::currentCenterVar</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return variance for center determination (linear least squares solution) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="190" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="190" bodyend="190"/>
-        <references refid="class_orient_1a6b473e284278e092e123a55db5a86384" compoundref="_orient_8_h" startline="106">sigC</references>
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-        <type>double</type>
-        <definition>double Orient::currentCenterVarZ</definition>
-        <argsstring>(void)</argsstring>
-        <name>currentCenterVarZ</name>
-        <qualifiedname>Orient::currentCenterVarZ</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return variance for center determination for z component alone. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="193" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="193" bodyend="193"/>
-        <references refid="class_orient_1ab74f590e11d8a94c4f4279cb1c09b4bd" compoundref="_orient_8_h" startline="106">sigCz</references>
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-      <memberdef kind="function" id="class_orient_1a8a36ae9f3eafc8d4afb6a93841240c33" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Orient::currentE</definition>
-        <argsstring>(void)</argsstring>
-        <name>currentE</name>
-        <qualifiedname>Orient::currentE</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return energy for disk ang mom. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="199" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="199" bodyend="199"/>
-        <references refid="class_orient_1a1d04a94ca95c872f4806290759e9edf7" compoundref="_orient_8_h" startline="110">Ecurr</references>
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-        <type>int</type>
-        <definition>int Orient::currentUsed</definition>
-        <argsstring>(void)</argsstring>
-        <name>currentUsed</name>
-        <qualifiedname>Orient::currentUsed</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return number of particles used. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="196" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="196" bodyend="196"/>
-        <references refid="class_orient_1afdb91c183fd364fe2991af75abef823c" compoundref="_orient_8_h" startline="108">used</references>
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-        <type>void</type>
-        <definition>void Orient::logEntry</definition>
-        <argsstring>(double time, Component *c)</argsstring>
-        <name>logEntry</name>
-        <qualifiedname>Orient::logEntry</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>time</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>Write log entry. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="156" column="8"/>
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-      <memberdef kind="function" id="class_orient_1ae40302e5cfa6dc14e1b7cb5d4977d93a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Orient::Orient</definition>
-        <argsstring>(int number_to_keep, int target, int Naccel, unsigned orient_flags, unsigned control_flags, string logfile, double dt=0.0, double damping=1.0)</argsstring>
-        <name>Orient</name>
-        <qualifiedname>Orient::Orient</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>number_to_keep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>target</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>Naccel</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>orient_flags</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>control_flags</declname>
-        </param>
-        <param>
-          <type>string</type>
-          <declname>logfile</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>dt</declname>
-          <defval>0.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>damping</declname>
-          <defval>1.0</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="134" column="3"/>
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-        <type>void</type>
-        <definition>void Orient::set_center</definition>
-        <argsstring>(double x, double y, double z)</argsstring>
-        <name>set_center</name>
-        <qualifiedname>Orient::set_center</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Set initial center (zero by default) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="142" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="142" bodyend="146"/>
-        <references refid="class_orient_1a0e0c27e1f35f0156e18febc3b6bbd2e4" compoundref="_orient_8_h" startline="100">center</references>
-        <references refid="class_orient_1a36f1ade07be9d350eac5597c384af7a5" compoundref="_orient_8_h" startline="100">center0</references>
-      </memberdef>
-      <memberdef kind="function" id="class_orient_1a16b6bc7639a7bc3888e57ddc6d2aed23" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Orient::set_cenvel</definition>
-        <argsstring>(double u, double v, double w)</argsstring>
-        <name>set_cenvel</name>
-        <qualifiedname>Orient::set_cenvel</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>u</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>v</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>w</declname>
-        </param>
-        <briefdescription>
-<para>Set initial center velocity (zero by default) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="149" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="149" bodyend="153"/>
-        <references refid="class_orient_1ade6f7629954efbf54fa1824f5095d54b" compoundref="_orient_8_h" startline="100">cenvel0</references>
-      </memberdef>
-      <memberdef kind="function" id="class_orient_1a1c8fb4529d57d33dd60ec4e4e3318394" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Orient::set_linear</definition>
-        <argsstring>()</argsstring>
-        <name>set_linear</name>
-        <qualifiedname>Orient::set_linear</qualifiedname>
-        <briefdescription>
-<para>Set center to move at constant velocity. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="159" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="159" bodyend="159"/>
-        <references refid="class_orient_1a4b1088387f9d9cc2ccfd2082a5410fdc" compoundref="_orient_8_h" startline="115">linear</references>
-      </memberdef>
-      <memberdef kind="function" id="class_orient_1a7c8daade94aabf07737c7ef20ba3358b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>Eigen::Matrix3d &amp;</type>
-        <definition>Eigen::Matrix3d &amp; Orient::transformBody</definition>
-        <argsstring>(void)</argsstring>
-        <name>transformBody</name>
-        <qualifiedname>Orient::transformBody</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return transformation to new body axes. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="165" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="165" bodyend="165"/>
-        <references refid="class_orient_1acec1058ed4797b77efa21e8f87696386" compoundref="_orient_8_h" startline="99">body</references>
-      </memberdef>
-      <memberdef kind="function" id="class_orient_1a16619422febe1574aa86d402d65a4594" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>Eigen::Matrix3d &amp;</type>
-        <definition>Eigen::Matrix3d &amp; Orient::transformOrig</definition>
-        <argsstring>(void)</argsstring>
-        <name>transformOrig</name>
-        <qualifiedname>Orient::transformOrig</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Return transformation to original coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="168" column="19" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="168" bodyend="168"/>
-        <references refid="class_orient_1afcdb5ceb334f569702d848df957f9803" compoundref="_orient_8_h" startline="99">orig</references>
-      </memberdef>
-      <memberdef kind="function" id="class_orient_1ade8e8e2be43f17d2550539575c24cab9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Orient::~Orient</definition>
-        <argsstring>()</argsstring>
-        <name>~Orient</name>
-        <qualifiedname>Orient::~Orient</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="139" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Class to keep track of orientation</para>
-<para>Log file contents:</para>
-<para><orderedlist>
-<listitem>
-<para><ref refid="class_time" kindref="compound">Time</ref>  </para>
-</listitem>
-<listitem>
-<para>Energy  </para>
-</listitem>
-<listitem>
-<para>Particles used  </para>
-</listitem>
-<listitem>
-<para>Current Axis(x) from regression  </para>
-</listitem>
-<listitem>
-<para>Current Axis(y)  </para>
-</listitem>
-<listitem>
-<para>Current Axis(z)  </para>
-</listitem>
-<listitem>
-<para>Last Axis(x) from particles  </para>
-</listitem>
-<listitem>
-<para>Last Axis(y)  </para>
-</listitem>
-<listitem>
-<para>Last Axis(z)  </para>
-</listitem>
-<listitem>
-<para>Current Center(x) from regression  </para>
-</listitem>
-<listitem>
-<para>Current Center(y)  </para>
-</listitem>
-<listitem>
-<para>Current Center(z)  </para>
-</listitem>
-<listitem>
-<para>Current Center(x) from analytic approx  </para>
-</listitem>
-<listitem>
-<para>Current Center(y)  </para>
-</listitem>
-<listitem>
-<para>Current Center(z)  </para>
-</listitem>
-<listitem>
-<para>Last Center(x) from particles  </para>
-</listitem>
-<listitem>
-<para>Last Center(y)  </para>
-</listitem>
-<listitem>
-<para>Last Center(z)  </para>
-</listitem>
-<listitem>
-<para>COM(x)  </para>
-</listitem>
-<listitem>
-<para>COM(y)  </para>
-</listitem>
-<listitem>
-<para>COM(z)  </para>
-</listitem>
-<listitem>
-<para>System COM(x)  </para>
-</listitem>
-<listitem>
-<para>System COM(y)  </para>
-</listitem>
-<listitem>
-<para>System COM(z)  </para>
-</listitem>
-</orderedlist>
-</para>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="2">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="1">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="89" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="90" bodyend="201"/>
-    <listofallmembers>
-      <member refid="class_orient_1aae522c2f57d3dc55cfc623af0eb95f33" prot="private" virt="non-virtual"><scope>Orient</scope><name>accel</name></member>
-      <member refid="class_orient_1a248c5cab4353d1e0e479d3a5a5ee786e" prot="public" virt="non-virtual"><scope>Orient</scope><name>accumulate</name></member>
-      <member refid="class_orient_1a333f3ce67df7508c31241998328e106b" prot="private" virt="non-virtual"><scope>Orient</scope><name>accumulate_cpu</name></member>
-      <member refid="class_orient_1a32063926f65bbdf3fb80d0b3834fab66" prot="private" virt="non-virtual"><scope>Orient</scope><name>angm</name></member>
-      <member refid="class_orient_1ac11a69e8024f1092460e9f969d273596a238ddc83b278efbb4d2696b60a8a7059" prot="public" virt="non-virtual"><scope>Orient</scope><name>AXIS</name></member>
-      <member refid="class_orient_1ab517af8a0cade5f03a44dd47c663a6e2" prot="private" virt="non-virtual"><scope>Orient</scope><name>axis</name></member>
-      <member refid="class_orient_1a078b6aad808b4de7ae9e360bcd9f0a3e" prot="private" virt="non-virtual"><scope>Orient</scope><name>axis1</name></member>
-      <member refid="class_orient_1acec1058ed4797b77efa21e8f87696386" prot="private" virt="non-virtual"><scope>Orient</scope><name>body</name></member>
-      <member refid="class_orient_1ac11a69e8024f1092460e9f969d273596a5bc52ef920db5ed1929af96ce023dacb" prot="public" virt="non-virtual"><scope>Orient</scope><name>CENTER</name></member>
-      <member refid="class_orient_1a0e0c27e1f35f0156e18febc3b6bbd2e4" prot="private" virt="non-virtual"><scope>Orient</scope><name>center</name></member>
-      <member refid="class_orient_1a36f1ade07be9d350eac5597c384af7a5" prot="private" virt="non-virtual"><scope>Orient</scope><name>center0</name></member>
-      <member refid="class_orient_1acdca4d2318782049a68286afa958d7e4" prot="private" virt="non-virtual"><scope>Orient</scope><name>center1</name></member>
-      <member refid="class_orient_1ade6f7629954efbf54fa1824f5095d54b" prot="private" virt="non-virtual"><scope>Orient</scope><name>cenvel0</name></member>
-      <member refid="class_orient_1a7ad70bac0470a10119f23260b1da293f" prot="private" virt="non-virtual"><scope>Orient</scope><name>cflags</name></member>
-      <member refid="class_orient_1ab5d37af72a85b76b2227627b490116f2" prot="public" virt="non-virtual"><scope>Orient</scope><name>ControlFlags</name></member>
-      <member refid="class_orient_1af60dd7161f82c6acb93ccbb89cd8112a" prot="private" virt="non-virtual"><scope>Orient</scope><name>current</name></member>
-      <member refid="class_orient_1a2aaecf7e96749b9f1f89b61a6f1218f7" prot="public" virt="non-virtual"><scope>Orient</scope><name>currentAccel</name></member>
-      <member refid="class_orient_1abd75e9d427721004de6b7ae615767259" prot="public" virt="non-virtual"><scope>Orient</scope><name>currentAxis</name></member>
-      <member refid="class_orient_1aa81c949d07c23e010579495ae9fcbeec" prot="public" virt="non-virtual"><scope>Orient</scope><name>currentAxisVar</name></member>
-      <member refid="class_orient_1aa97d11652158f43075e70f1b43654c84" prot="public" virt="non-virtual"><scope>Orient</scope><name>currentCenter</name></member>
-      <member refid="class_orient_1a63dc5d8f5cd59b45eb91ff2960c2760c" prot="public" virt="non-virtual"><scope>Orient</scope><name>currentCenterVar</name></member>
-      <member refid="class_orient_1afbffdea19192fa3d6aec41469ff2eafd" prot="public" virt="non-virtual"><scope>Orient</scope><name>currentCenterVarZ</name></member>
-      <member refid="class_orient_1a8a36ae9f3eafc8d4afb6a93841240c33" prot="public" virt="non-virtual"><scope>Orient</scope><name>currentE</name></member>
-      <member refid="class_orient_1a5e862e1a3a6efd39c0b28df031b6261d" prot="public" virt="non-virtual"><scope>Orient</scope><name>currentUsed</name></member>
-      <member refid="class_orient_1a47243960d8f23df2999835510f296b86" prot="private" virt="non-virtual"><scope>Orient</scope><name>damp</name></member>
-      <member refid="class_orient_1af041ec03cb4ab346b776194a99f62c80" prot="private" virt="non-virtual"><scope>Orient</scope><name>deltaT</name></member>
-      <member refid="class_orient_1ab5d37af72a85b76b2227627b490116f2a9bea29023577cfecab897fb1bf4efea4" prot="public" virt="non-virtual"><scope>Orient</scope><name>DIAG</name></member>
-      <member refid="class_orient_1a825f23bee6c0be3b0176f4f65f57c60f" prot="private" virt="non-virtual"><scope>Orient</scope><name>domdt</name></member>
-      <member refid="class_orient_1a5bfc70c0f60da8df19a7f4dd83575d0d" prot="private" virt="non-virtual"><scope>Orient</scope><name>DV</name></member>
-      <member refid="class_orient_1a1d04a94ca95c872f4806290759e9edf7" prot="private" virt="non-virtual"><scope>Orient</scope><name>Ecurr</name></member>
-      <member refid="class_orient_1a45d424fe0561d6c0e3082917444b903f" prot="private" virt="non-virtual"><scope>Orient</scope><name>Elast</name></member>
-      <member refid="class_orient_1ab5d37af72a85b76b2227627b490116f2aae9a4f491c8a858c01522c38c0fb6e86" prot="public" virt="non-virtual"><scope>Orient</scope><name>EXTERNAL</name></member>
-      <member refid="class_orient_1a8af3f658740ff3a2e2b3632228f87a9e" prot="private" virt="non-virtual"><scope>Orient</scope><name>intercept</name></member>
-      <member refid="class_orient_1ab5d37af72a85b76b2227627b490116f2a56390961a62625218e91702d63bbf041" prot="public" virt="non-virtual"><scope>Orient</scope><name>KE</name></member>
-      <member refid="class_orient_1a2bcc27eac45acb48eca63319729130f8" prot="private" virt="non-virtual"><scope>Orient</scope><name>keep</name></member>
-      <member refid="class_orient_1ac6cd9c440a258703bf550137c86df8f1" prot="private" virt="non-virtual"><scope>Orient</scope><name>lasttime</name></member>
-      <member refid="class_orient_1a4b1088387f9d9cc2ccfd2082a5410fdc" prot="private" virt="non-virtual"><scope>Orient</scope><name>linear</name></member>
-      <member refid="class_orient_1ac7560513b2547f3bb788cb98368a34f3" prot="public" virt="non-virtual"><scope>Orient</scope><name>logEntry</name></member>
-      <member refid="class_orient_1a25dc109bf488f4cf78e1208f6e198eda" prot="private" virt="non-virtual"><scope>Orient</scope><name>logfile</name></member>
-      <member refid="class_orient_1a1d7c8f7f7107fcb19b80d564431d1879" prot="private" virt="non-virtual"><scope>Orient</scope><name>many</name></member>
-      <member refid="class_orient_1a7584024b0d593158785e0f45e34c6484" prot="private" virt="non-virtual"><scope>Orient</scope><name>Nlast</name></member>
-      <member refid="class_orient_1a7772353ad05b52b64e28a39b7c15ec1b" prot="private" virt="non-virtual"><scope>Orient</scope><name>oflags</name></member>
-      <member refid="class_orient_1a281e8a15aa2f951c7634190e65071a9b" prot="private" virt="non-virtual"><scope>Orient</scope><name>omega</name></member>
-      <member refid="class_orient_1ae40302e5cfa6dc14e1b7cb5d4977d93a" prot="public" virt="non-virtual"><scope>Orient</scope><name>Orient</name></member>
-      <member refid="class_orient_1ac11a69e8024f1092460e9f969d273596" prot="public" virt="non-virtual"><scope>Orient</scope><name>OrientFlags</name></member>
-      <member refid="class_orient_1afcdb5ceb334f569702d848df957f9803" prot="private" virt="non-virtual"><scope>Orient</scope><name>orig</name></member>
-      <member refid="class_orient_1a3c2620c2dd967b5ee26eafe5ba3abb18" prot="private" virt="non-virtual"><scope>Orient</scope><name>pos</name></member>
-      <member refid="class_orient_1a70af3b9f2042db78043be7b8693f5b97" prot="private" virt="non-virtual"><scope>Orient</scope><name>psa</name></member>
-      <member refid="class_orient_1a92e4cf917f9bc05b829012aa70ec173c" prot="private" virt="non-virtual"><scope>Orient</scope><name>pseudo</name></member>
-      <member refid="class_orient_1aab4939d097ff48294805c98a625fc2a4" prot="public" virt="non-virtual"><scope>Orient</scope><name>set_center</name></member>
-      <member refid="class_orient_1a16b6bc7639a7bc3888e57ddc6d2aed23" prot="public" virt="non-virtual"><scope>Orient</scope><name>set_cenvel</name></member>
-      <member refid="class_orient_1a1c8fb4529d57d33dd60ec4e4e3318394" prot="public" virt="non-virtual"><scope>Orient</scope><name>set_linear</name></member>
-      <member refid="class_orient_1a608f69f374c8506493118fd078a686de" prot="private" virt="non-virtual"><scope>Orient</scope><name>sigA</name></member>
-      <member refid="class_orient_1a6b473e284278e092e123a55db5a86384" prot="private" virt="non-virtual"><scope>Orient</scope><name>sigC</name></member>
-      <member refid="class_orient_1ab74f590e11d8a94c4f4279cb1c09b4bd" prot="private" virt="non-virtual"><scope>Orient</scope><name>sigCz</name></member>
-      <member refid="class_orient_1a7204a57eb72da10e184c6a73237f0ca8" prot="private" virt="non-virtual"><scope>Orient</scope><name>slope</name></member>
-      <member refid="class_orient_1a52a52d397aba95defaf4829ad3140538" prot="private" virt="non-virtual"><scope>Orient</scope><name>sumsA</name></member>
-      <member refid="class_orient_1a7e5d32fea9e37b494d3c996abb7df986" prot="private" virt="non-virtual"><scope>Orient</scope><name>sumsC</name></member>
-      <member refid="class_orient_1a0e96e1d64b6f52362af01357a51d0de3" prot="private" virt="non-virtual"><scope>Orient</scope><name>sumX</name></member>
-      <member refid="class_orient_1a789c5fcb61ec7da8f4a2040b9f8241c5" prot="private" virt="non-virtual"><scope>Orient</scope><name>sumX2</name></member>
-      <member refid="class_orient_1abc44b1ed2fa6a15076a736061efc225d" prot="private" virt="non-virtual"><scope>Orient</scope><name>sumXY</name></member>
-      <member refid="class_orient_1a88d781162d0d60aa0e532d2dc218b092" prot="private" virt="non-virtual"><scope>Orient</scope><name>sumY</name></member>
-      <member refid="class_orient_1ad27fd08445ab1bff8d12a580980fe23b" prot="private" virt="non-virtual"><scope>Orient</scope><name>sumY2</name></member>
-      <member refid="class_orient_1a8790d2a2606f0756386cfa61e6c771ec" prot="private" virt="non-virtual"><scope>Orient</scope><name>t</name></member>
-      <member refid="class_orient_1a7c8daade94aabf07737c7ef20ba3358b" prot="public" virt="non-virtual"><scope>Orient</scope><name>transformBody</name></member>
-      <member refid="class_orient_1a16619422febe1574aa86d402d65a4594" prot="public" virt="non-virtual"><scope>Orient</scope><name>transformOrig</name></member>
-      <member refid="class_orient_1afdb91c183fd364fe2991af75abef823c" prot="private" virt="non-virtual"><scope>Orient</scope><name>used</name></member>
-      <member refid="class_orient_1a37a9fae59c55d4e4a808f7b69ac634b9" prot="private" virt="non-virtual"><scope>Orient</scope><name>vel</name></member>
-      <member refid="class_orient_1ade8e8e2be43f17d2550539575c24cab9" prot="public" virt="non-virtual"><scope>Orient</scope><name>~Orient</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_ortho_function.xml b/doxyxml/class_ortho_function.xml
deleted file mode 100644
index 9d0a789..0000000
--- a/doxyxml/class_ortho_function.xml
+++ /dev/null
@@ -1,543 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_ortho_function" kind="class" language="C++" prot="public">
-    <compoundname>OrthoFunction</compoundname>
-    <includes refid="_ortho_function_8_h" local="no">OrthoFunction.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="class_ortho_function_1ae9ede9ae3c0c32d5e60ec326bce606f0" prot="public" static="no">
-        <type>std::function&lt; double(double)&gt;</type>
-        <definition>using OrthoFunction::DensFunc =  std::function&lt;double(double)&gt;</definition>
-        <argsstring></argsstring>
-        <name>DensFunc</name>
-        <qualifiedname>OrthoFunction::DensFunc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="18" column="3" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_ortho_function_1abcda02877da0939ed12bf55417b2a082" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd OrthoFunction::alph</definition>
-        <argsstring></argsstring>
-        <name>alph</name>
-        <qualifiedname>OrthoFunction::alph</qualifiedname>
-        <briefdescription>
-<para>Recursion coefficients and norm. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="44" column="19" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1ab721d5201751cc3eedf241fa51b4428d" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd OrthoFunction::beta</definition>
-        <argsstring></argsstring>
-        <name>beta</name>
-        <qualifiedname>OrthoFunction::beta</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="44" column="24" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a1cab252ae2b89b95da17bf6e59aaa9d9" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OrthoFunction::dof</definition>
-        <argsstring></argsstring>
-        <name>dof</name>
-        <qualifiedname>OrthoFunction::dof</qualifiedname>
-        <briefdescription>
-<para>Degrees of freedom. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="32" column="7" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a3a2733eb9891d1b40ed7a9a98cc99f4b" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoFunction::dx</definition>
-        <argsstring></argsstring>
-        <name>dx</name>
-        <qualifiedname>OrthoFunction::dx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="41" column="20" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1af05163e297127c0405fc7330f65ec90e" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OrthoFunction::knots</definition>
-        <argsstring></argsstring>
-        <name>knots</name>
-        <qualifiedname>OrthoFunction::knots</qualifiedname>
-        <initializer>= 400</initializer>
-        <briefdescription>
-<para><ref refid="class_legendre" kindref="compound">Legendre</ref> knots. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="47" column="7" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="47" bodyend="-1"/>
-        <referencedby refid="class_ortho_function_1a49de6972d696ee6175ecc4a552d9f3e7" compoundref="_ortho_function_8_h" startline="95" endline="99">setKnots</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a3338b7e38105d023860cffe98c1ffee7" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_lege_quad" kindref="compound">LegeQuad</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;LegeQuad&gt; OrthoFunction::lq</definition>
-        <argsstring></argsstring>
-        <name>lq</name>
-        <qualifiedname>OrthoFunction::lq</qualifiedname>
-        <briefdescription>
-<para>Gaussian quadrature. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="50" column="19" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="50" bodyend="-1"/>
-        <referencedby refid="class_ortho_function_1a49de6972d696ee6175ecc4a552d9f3e7" compoundref="_ortho_function_8_h" startline="95" endline="99">setKnots</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a89d9c79cdafc9b54dbc3d8d8bbc4efc9" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OrthoFunction::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>OrthoFunction::nmax</qualifiedname>
-        <briefdescription>
-<para>Polynomial order. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="26" column="7" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="26" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a28fbb28fd3c6a67877e7166a79f2e247" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd OrthoFunction::norm</definition>
-        <argsstring></argsstring>
-        <name>norm</name>
-        <qualifiedname>OrthoFunction::norm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="44" column="29" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a8352622b6558a4f039e69d54562509df" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoFunction::rmax</definition>
-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>OrthoFunction::rmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="38" column="15" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1ad7f7640272b85b2c697cceb25e61a049" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoFunction::rmin</definition>
-        <argsstring></argsstring>
-        <name>rmin</name>
-        <qualifiedname>OrthoFunction::rmin</qualifiedname>
-        <briefdescription>
-<para>Radial boundaries. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="38" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoFunction::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>OrthoFunction::scale</qualifiedname>
-        <briefdescription>
-<para>Mapping scale. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="29" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="29" bodyend="-1"/>
-        <referencedby refid="class_ortho_function_1a214ec08eca9cacf8e79bf382e750b871" compoundref="_ortho_function_8_h" startline="66" endline="70">d_r_to_x</referencedby>
-        <referencedby refid="class_ortho_function_1a6b1e4f353cd771970a6062f68205282c" compoundref="_ortho_function_8_h" startline="55" endline="59">r_to_x</referencedby>
-        <referencedby refid="class_ortho_function_1a9aabff39825d50734517fad79ee458b0" compoundref="_ortho_function_8_h" startline="61" endline="64">x_to_r</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a1a9ce9fcf086f7cc99741db4daafcc90" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OrthoFunction::segment</definition>
-        <argsstring></argsstring>
-        <name>segment</name>
-        <qualifiedname>OrthoFunction::segment</qualifiedname>
-        <briefdescription>
-<para>Orthogonal in x rather than r. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="35" column="8" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a27bf66591a8c18be3f5ca572703554d0" prot="private" static="no" mutable="no">
-        <type><ref refid="class_ortho_function_1ae9ede9ae3c0c32d5e60ec326bce606f0" kindref="member">DensFunc</ref></type>
-        <definition>DensFunc OrthoFunction::W</definition>
-        <argsstring></argsstring>
-        <name>W</name>
-        <qualifiedname>OrthoFunction::W</qualifiedname>
-        <briefdescription>
-<para>Sqrt root weight function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="23" column="12" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a696a02f38c75aa85334ff36a337a6f36" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoFunction::xmax</definition>
-        <argsstring></argsstring>
-        <name>xmax</name>
-        <qualifiedname>OrthoFunction::xmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="41" column="15" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_function_1a76cc8c546e2193411a454dab3271824e" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoFunction::xmin</definition>
-        <argsstring></argsstring>
-        <name>xmin</name>
-        <qualifiedname>OrthoFunction::xmin</qualifiedname>
-        <briefdescription>
-<para>Mapped radial boundaries and range. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="41" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_ortho_function_1a214ec08eca9cacf8e79bf382e750b871" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double OrthoFunction::d_r_to_x</definition>
-        <argsstring>(double x)</argsstring>
-        <name>d_r_to_x</name>
-        <qualifiedname>OrthoFunction::d_r_to_x</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="66" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="66" bodyend="70"/>
-        <references refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" compoundref="_ortho_function_8_h" startline="29">scale</references>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1ad48d9a2800afd2d519ee48a104dc1d43" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OrthoFunction::generate</definition>
-        <argsstring>()</argsstring>
-        <name>generate</name>
-        <qualifiedname>OrthoFunction::generate</qualifiedname>
-        <briefdescription>
-<para>Generate the recursion for the orthogonal polynomials. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="80" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1ae7690d4e1253a6784e7978f41679bae2" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd OrthoFunction::poly_eval</definition>
-        <argsstring>(double t, int n)</argsstring>
-        <name>poly_eval</name>
-        <qualifiedname>OrthoFunction::poly_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Polynomial evaluation at t for orders j=0,...,n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="77" column="19"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1a6b1e4f353cd771970a6062f68205282c" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double OrthoFunction::r_to_x</definition>
-        <argsstring>(double r)</argsstring>
-        <name>r_to_x</name>
-        <qualifiedname>OrthoFunction::r_to_x</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Coordinate scaling. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="55" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="55" bodyend="59"/>
-        <references refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" compoundref="_ortho_function_8_h" startline="29">scale</references>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1a1db6981a7296814ae36ccc824b208c77" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double OrthoFunction::scalar_prod</definition>
-        <argsstring>(int n, int m)</argsstring>
-        <name>scalar_prod</name>
-        <qualifiedname>OrthoFunction::scalar_prod</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-<para>Inner product polynomial of order n with moment m. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="74" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1a9aabff39825d50734517fad79ee458b0" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double OrthoFunction::x_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>x_to_r</name>
-        <qualifiedname>OrthoFunction::x_to_r</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="61" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="61" bodyend="64"/>
-        <references refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" compoundref="_ortho_function_8_h" startline="29">scale</references>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_ortho_function_1a14279151a6c9cea9db93ebf056ab0c8c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OrthoFunction::dumpOrtho</definition>
-        <argsstring>(const std::string &amp;filename)</argsstring>
-        <name>dumpOrtho</name>
-        <qualifiedname>OrthoFunction::dumpOrtho</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>filename</declname>
-        </param>
-        <briefdescription>
-<para>Dump the orthogonal function table. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="105" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1a5dce33e098819f50e474faaec38f8e6d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd OrthoFunction::operator()</definition>
-        <argsstring>(double r)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>OrthoFunction::operator()</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate orthogonal functions at r. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="92" column="19"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1a5fba8890bba5e3ab528e590687ae559a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OrthoFunction::OrthoFunction</definition>
-        <argsstring>(int nmax, DensFunc W, double rmin, double rmax, double scale, int dof, bool segment=false)</argsstring>
-        <name>OrthoFunction</name>
-        <qualifiedname>OrthoFunction::OrthoFunction</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type><ref refid="class_ortho_function_1ae9ede9ae3c0c32d5e60ec326bce606f0" kindref="member">DensFunc</ref></type>
-          <declname>W</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>scale</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>dof</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>segment</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="85" column="3"/>
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-      <memberdef kind="function" id="class_ortho_function_1a49de6972d696ee6175ecc4a552d9f3e7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void OrthoFunction::setKnots</definition>
-        <argsstring>(int N)</argsstring>
-        <name>setKnots</name>
-        <qualifiedname>OrthoFunction::setKnots</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <briefdescription>
-<para>Reset <ref refid="class_legendre" kindref="compound">Legendre</ref> knots and weights for inner product. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="95" column="8" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="95" bodyend="99"/>
-        <references refid="class_ortho_function_1af05163e297127c0405fc7330f65ec90e" compoundref="_ortho_function_8_h" startline="47">knots</references>
-        <references refid="class_ortho_function_1a3338b7e38105d023860cffe98c1ffee7" compoundref="_ortho_function_8_h" startline="50">lq</references>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1aeb8b4c618c4f0d8be7be8ecd20f39bc5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd OrthoFunction::testOrtho</definition>
-        <argsstring>()</argsstring>
-        <name>testOrtho</name>
-        <qualifiedname>OrthoFunction::testOrtho</qualifiedname>
-        <briefdescription>
-<para>Test orthogonality. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="102" column="19"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_function_1a3f176d99aaac1e31727176967e9b8bce" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual OrthoFunction::~OrthoFunction</definition>
-        <argsstring>()</argsstring>
-        <name>~OrthoFunction</name>
-        <qualifiedname>OrthoFunction::~OrthoFunction</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="89" column="11" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="89" bodyend="89"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Compute orthogonal functions whose lowest-order member is the background density using the Stieltjes procedure for generating 3-term recursion </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/OrthoFunction.H" line="14" column="1" bodyfile="/home/weinberg/Projects/EXP/include/OrthoFunction.H" bodystart="15" bodyend="106"/>
-    <listofallmembers>
-      <member refid="class_ortho_function_1abcda02877da0939ed12bf55417b2a082" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>alph</name></member>
-      <member refid="class_ortho_function_1ab721d5201751cc3eedf241fa51b4428d" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>beta</name></member>
-      <member refid="class_ortho_function_1a214ec08eca9cacf8e79bf382e750b871" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>d_r_to_x</name></member>
-      <member refid="class_ortho_function_1ae9ede9ae3c0c32d5e60ec326bce606f0" prot="public" virt="non-virtual"><scope>OrthoFunction</scope><name>DensFunc</name></member>
-      <member refid="class_ortho_function_1a1cab252ae2b89b95da17bf6e59aaa9d9" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>dof</name></member>
-      <member refid="class_ortho_function_1a14279151a6c9cea9db93ebf056ab0c8c" prot="public" virt="non-virtual"><scope>OrthoFunction</scope><name>dumpOrtho</name></member>
-      <member refid="class_ortho_function_1a3a2733eb9891d1b40ed7a9a98cc99f4b" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>dx</name></member>
-      <member refid="class_ortho_function_1ad48d9a2800afd2d519ee48a104dc1d43" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>generate</name></member>
-      <member refid="class_ortho_function_1af05163e297127c0405fc7330f65ec90e" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>knots</name></member>
-      <member refid="class_ortho_function_1a3338b7e38105d023860cffe98c1ffee7" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>lq</name></member>
-      <member refid="class_ortho_function_1a89d9c79cdafc9b54dbc3d8d8bbc4efc9" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>nmax</name></member>
-      <member refid="class_ortho_function_1a28fbb28fd3c6a67877e7166a79f2e247" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>norm</name></member>
-      <member refid="class_ortho_function_1a5dce33e098819f50e474faaec38f8e6d" prot="public" virt="non-virtual"><scope>OrthoFunction</scope><name>operator()</name></member>
-      <member refid="class_ortho_function_1a5fba8890bba5e3ab528e590687ae559a" prot="public" virt="non-virtual"><scope>OrthoFunction</scope><name>OrthoFunction</name></member>
-      <member refid="class_ortho_function_1ae7690d4e1253a6784e7978f41679bae2" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>poly_eval</name></member>
-      <member refid="class_ortho_function_1a6b1e4f353cd771970a6062f68205282c" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>r_to_x</name></member>
-      <member refid="class_ortho_function_1a8352622b6558a4f039e69d54562509df" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>rmax</name></member>
-      <member refid="class_ortho_function_1ad7f7640272b85b2c697cceb25e61a049" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>rmin</name></member>
-      <member refid="class_ortho_function_1a1db6981a7296814ae36ccc824b208c77" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>scalar_prod</name></member>
-      <member refid="class_ortho_function_1af4aacee81cb8981f01f1c6d37ade2d5b" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>scale</name></member>
-      <member refid="class_ortho_function_1a1a9ce9fcf086f7cc99741db4daafcc90" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>segment</name></member>
-      <member refid="class_ortho_function_1a49de6972d696ee6175ecc4a552d9f3e7" prot="public" virt="non-virtual"><scope>OrthoFunction</scope><name>setKnots</name></member>
-      <member refid="class_ortho_function_1aeb8b4c618c4f0d8be7be8ecd20f39bc5" prot="public" virt="non-virtual"><scope>OrthoFunction</scope><name>testOrtho</name></member>
-      <member refid="class_ortho_function_1a27bf66591a8c18be3f5ca572703554d0" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>W</name></member>
-      <member refid="class_ortho_function_1a9aabff39825d50734517fad79ee458b0" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>x_to_r</name></member>
-      <member refid="class_ortho_function_1a696a02f38c75aa85334ff36a337a6f36" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>xmax</name></member>
-      <member refid="class_ortho_function_1a76cc8c546e2193411a454dab3271824e" prot="private" virt="non-virtual"><scope>OrthoFunction</scope><name>xmin</name></member>
-      <member refid="class_ortho_function_1a3f176d99aaac1e31727176967e9b8bce" prot="public" virt="virtual"><scope>OrthoFunction</scope><name>~OrthoFunction</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_ortho_poly.xml b/doxyxml/class_ortho_poly.xml
deleted file mode 100644
index 2cd0d7e..0000000
--- a/doxyxml/class_ortho_poly.xml
+++ /dev/null
@@ -1,438 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_ortho_poly" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>OrthoPoly</compoundname>
-    <derivedcompoundref refid="class_cheb1" prot="public" virt="non-virtual">Cheb1</derivedcompoundref>
-    <derivedcompoundref refid="class_cheb2" prot="public" virt="non-virtual">Cheb2</derivedcompoundref>
-    <derivedcompoundref refid="class_gen_lagu" prot="public" virt="non-virtual">GenLagu</derivedcompoundref>
-    <derivedcompoundref refid="class_hermite" prot="public" virt="non-virtual">Hermite</derivedcompoundref>
-    <derivedcompoundref refid="class_legendre" prot="public" virt="non-virtual">Legendre</derivedcompoundref>
-    <derivedcompoundref refid="class_ultra" prot="public" virt="non-virtual">Ultra</derivedcompoundref>
-    <includes refid="_ortho_poly_8_h" local="no">OrthoPoly.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_ortho_poly_1a2477962944125247f6bb446ba361afaa" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoPoly::coefs[4]</definition>
-        <argsstring>[4]</argsstring>
-        <name>coefs</name>
-        <qualifiedname>OrthoPoly::coefs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="15" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="15" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoPoly::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>OrthoPoly::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="19" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="19" bodyend="-1"/>
-        <referencedby refid="class_cheb1_1a778123a0fa83fc0b10c818c7b17910c4" compoundref="_ortho_poly_8_h" startline="140" endline="144">Cheb1::Cheb1</referencedby>
-        <referencedby refid="class_cheb2_1af6b0c70c48aa34c3f0498e0a58a6c48e" compoundref="_ortho_poly_8_h" startline="163" endline="167">Cheb2::Cheb2</referencedby>
-        <referencedby refid="class_gen_lagu_1aea07b10cc1f0b67cc1b00f50edcdd134" compoundref="_ortho_poly_8_h" startline="52" endline="57">GenLagu::GenLagu</referencedby>
-        <referencedby refid="class_ortho_poly_1a954a4941a43f355ddb7e17185eca5052" compoundref="_ortho_poly_8_h" startline="40" endline="40">get_a</referencedby>
-        <referencedby refid="class_hermite_1a65f7a86f19d866306d86c4dd26124dfa" compoundref="_ortho_poly_8_h" startline="186" endline="190">Hermite::Hermite</referencedby>
-        <referencedby refid="class_legendre_1a434e3f774067d26051087fe0c49f2620" compoundref="_ortho_poly_8_h" startline="78" endline="82">Legendre::Legendre</referencedby>
-        <referencedby refid="class_ultra_1a3cc10ab65fb04480f8a0fc65c8668939" compoundref="_ortho_poly_8_h" startline="104" endline="109">Ultra::Ultra</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OrthoPoly::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>OrthoPoly::b</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="20" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="20" bodyend="-1"/>
-        <referencedby refid="class_cheb1_1a778123a0fa83fc0b10c818c7b17910c4" compoundref="_ortho_poly_8_h" startline="140" endline="144">Cheb1::Cheb1</referencedby>
-        <referencedby refid="class_cheb2_1af6b0c70c48aa34c3f0498e0a58a6c48e" compoundref="_ortho_poly_8_h" startline="163" endline="167">Cheb2::Cheb2</referencedby>
-        <referencedby refid="class_gen_lagu_1aea07b10cc1f0b67cc1b00f50edcdd134" compoundref="_ortho_poly_8_h" startline="52" endline="57">GenLagu::GenLagu</referencedby>
-        <referencedby refid="class_ortho_poly_1a5e664c78f30952123f31d15582e0bee2" compoundref="_ortho_poly_8_h" startline="41" endline="41">get_b</referencedby>
-        <referencedby refid="class_hermite_1a65f7a86f19d866306d86c4dd26124dfa" compoundref="_ortho_poly_8_h" startline="186" endline="190">Hermite::Hermite</referencedby>
-        <referencedby refid="class_legendre_1a434e3f774067d26051087fe0c49f2620" compoundref="_ortho_poly_8_h" startline="78" endline="82">Legendre::Legendre</referencedby>
-        <referencedby refid="class_ultra_1a3cc10ab65fb04480f8a0fc65c8668939" compoundref="_ortho_poly_8_h" startline="104" endline="109">Ultra::Ultra</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" prot="protected" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double* OrthoPoly::param</definition>
-        <argsstring></argsstring>
-        <name>param</name>
-        <qualifiedname>OrthoPoly::param</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_cheb1_1a778123a0fa83fc0b10c818c7b17910c4" compoundref="_ortho_poly_8_h" startline="140" endline="144">Cheb1::Cheb1</referencedby>
-        <referencedby refid="class_cheb2_1af6b0c70c48aa34c3f0498e0a58a6c48e" compoundref="_ortho_poly_8_h" startline="163" endline="167">Cheb2::Cheb2</referencedby>
-        <referencedby refid="class_gen_lagu_1aea07b10cc1f0b67cc1b00f50edcdd134" compoundref="_ortho_poly_8_h" startline="52" endline="57">GenLagu::GenLagu</referencedby>
-        <referencedby refid="class_hermite_1a65f7a86f19d866306d86c4dd26124dfa" compoundref="_ortho_poly_8_h" startline="186" endline="190">Hermite::Hermite</referencedby>
-        <referencedby refid="class_legendre_1a434e3f774067d26051087fe0c49f2620" compoundref="_ortho_poly_8_h" startline="78" endline="82">Legendre::Legendre</referencedby>
-        <referencedby refid="class_ultra_1a3cc10ab65fb04480f8a0fc65c8668939" compoundref="_ortho_poly_8_h" startline="104" endline="109">Ultra::Ultra</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_ortho_poly_1a8691a2e79b7d678a2f33c295a230ce48" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OrthoPoly::coef1</definition>
-        <argsstring>(const int n)=0</argsstring>
-        <name>coef1</name>
-        <qualifiedname>OrthoPoly::coef1</qualifiedname>
-        <reimplementedby refid="class_gen_lagu_1a6ac0b03f6e53a985e91edf1a2effcbeb">coef1</reimplementedby>
-        <reimplementedby refid="class_legendre_1a0d1d4e87fc98c1863a3aa583f126f402">coef1</reimplementedby>
-        <reimplementedby refid="class_ultra_1a300930c02d3c86cea3684bcd953b528b">coef1</reimplementedby>
-        <reimplementedby refid="class_cheb1_1ad64c1e132734c4bddcd2ede0e8137100">coef1</reimplementedby>
-        <reimplementedby refid="class_cheb2_1a5303f7db171db0ee3b35b0c0a7d2908f">coef1</reimplementedby>
-        <reimplementedby refid="class_hermite_1a20584862f32b4dc3cea3a7ad8ca5aad8">coef1</reimplementedby>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="33" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1a074c75f7b1758471d5ca9e0c9556adc7" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OrthoPoly::coef2</definition>
-        <argsstring>(const int n)=0</argsstring>
-        <name>coef2</name>
-        <qualifiedname>OrthoPoly::coef2</qualifiedname>
-        <reimplementedby refid="class_gen_lagu_1a58f4b9eafe779f340024d37ed79590de">coef2</reimplementedby>
-        <reimplementedby refid="class_legendre_1a269daa87798014d15c424060036918cf">coef2</reimplementedby>
-        <reimplementedby refid="class_ultra_1a91b9ca746463e7bda00cf84aa6df5421">coef2</reimplementedby>
-        <reimplementedby refid="class_cheb1_1a7aa6efb2eed20c6882389664329ae6e0">coef2</reimplementedby>
-        <reimplementedby refid="class_cheb2_1a2c4c84551fd52fa733f5bc903481c30d">coef2</reimplementedby>
-        <reimplementedby refid="class_hermite_1a2d8ad699c5c538c2b8d86bc564db4767">coef2</reimplementedby>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="34" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1a5a1ad9977808f1a4503ccde47b260b57" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OrthoPoly::coef3</definition>
-        <argsstring>(const int n)=0</argsstring>
-        <name>coef3</name>
-        <qualifiedname>OrthoPoly::coef3</qualifiedname>
-        <reimplementedby refid="class_gen_lagu_1adec311d3e33863145b12fa9b47fd41b2">coef3</reimplementedby>
-        <reimplementedby refid="class_legendre_1af4ee4c6b608f71e0b294b606de7cf900">coef3</reimplementedby>
-        <reimplementedby refid="class_ultra_1a3da223bbee626d16cc568d6d69e16e76">coef3</reimplementedby>
-        <reimplementedby refid="class_cheb1_1aa06dbd92891410d54a930c3d8ae57493">coef3</reimplementedby>
-        <reimplementedby refid="class_cheb2_1a2a81555193a44fd55dc0549917640c23">coef3</reimplementedby>
-        <reimplementedby refid="class_hermite_1a811b64bf95278e44cedafe8ff7034842">coef3</reimplementedby>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="35" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1aa86a42c4a207651a43822242d198725b" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OrthoPoly::coef4</definition>
-        <argsstring>(const int n)=0</argsstring>
-        <name>coef4</name>
-        <qualifiedname>OrthoPoly::coef4</qualifiedname>
-        <reimplementedby refid="class_gen_lagu_1af46b94ad882e040d1ed43cad6b6002ad">coef4</reimplementedby>
-        <reimplementedby refid="class_legendre_1a9ba54f9872f17576e0537f87df0ac718">coef4</reimplementedby>
-        <reimplementedby refid="class_ultra_1a4f973fceaabb2faa5a21e05e268b7d42">coef4</reimplementedby>
-        <reimplementedby refid="class_cheb1_1a20335fd6b9c528da6399cabacae65039">coef4</reimplementedby>
-        <reimplementedby refid="class_cheb2_1a6a34ad54975368f6060341cbcf12db04">coef4</reimplementedby>
-        <reimplementedby refid="class_hermite_1a91b9ce2aee7da32a99010969f91f17e0">coef4</reimplementedby>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="36" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1afe8111b9a2946e381e7283a8e06da3b8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double OrthoPoly::f</definition>
-        <argsstring>(const double x, const int n)</argsstring>
-        <name>f</name>
-        <qualifiedname>OrthoPoly::f</qualifiedname>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="38" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1afaaab0fc6afe43bc01271a549adfc96f" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OrthoPoly::f0</definition>
-        <argsstring>(const double x)=0</argsstring>
-        <name>f0</name>
-        <qualifiedname>OrthoPoly::f0</qualifiedname>
-        <reimplementedby refid="class_gen_lagu_1ac551c2e819da1c33d57f8261ae684577">f0</reimplementedby>
-        <reimplementedby refid="class_legendre_1a7f8a4f8230d4059d29fc06c106b8fb48">f0</reimplementedby>
-        <reimplementedby refid="class_ultra_1a5315994bd8122511d13408f7d8115b92">f0</reimplementedby>
-        <reimplementedby refid="class_cheb1_1ab4fdcde16dd68dc8e3bcafa28d35e571">f0</reimplementedby>
-        <reimplementedby refid="class_cheb2_1a96e82bc058b95ba0f9109ddd137d5091">f0</reimplementedby>
-        <reimplementedby refid="class_hermite_1aa1996089eb7171792d8d7083fd643e8e">f0</reimplementedby>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="30" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1a9e16af920759d1d259e492fab6c79100" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OrthoPoly::f1</definition>
-        <argsstring>(const double x)=0</argsstring>
-        <name>f1</name>
-        <qualifiedname>OrthoPoly::f1</qualifiedname>
-        <reimplementedby refid="class_gen_lagu_1af4d0e1aa8aa9f44d3647e9c13a962a69">f1</reimplementedby>
-        <reimplementedby refid="class_legendre_1a6194ebf2e2c7f9ad707a68260d1d5418">f1</reimplementedby>
-        <reimplementedby refid="class_ultra_1aade53399b6b7634abd5a58d062d4413d">f1</reimplementedby>
-        <reimplementedby refid="class_cheb1_1a7d5956b9e9bce1b0cfec3d3d07e01672">f1</reimplementedby>
-        <reimplementedby refid="class_cheb2_1a7cbc8d1e1c0571b7a2e6bdd8d1df7fe2">f1</reimplementedby>
-        <reimplementedby refid="class_hermite_1a83fa92a38f026b34788778489d83ed72">f1</reimplementedby>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="31" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1aed2903244bcd8423c11ddb3343f701c0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd OrthoPoly::fv</definition>
-        <argsstring>(const double x, const int n)</argsstring>
-        <name>fv</name>
-        <qualifiedname>OrthoPoly::fv</qualifiedname>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="39" column="19"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1a954a4941a43f355ddb7e17185eca5052" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double OrthoPoly::get_a</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_a</name>
-        <qualifiedname>OrthoPoly::get_a</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="40" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="40" bodyend="40"/>
-        <references refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" compoundref="_ortho_poly_8_h" startline="19">a</references>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1a5e664c78f30952123f31d15582e0bee2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double OrthoPoly::get_b</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_b</name>
-        <qualifiedname>OrthoPoly::get_b</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="41" column="10" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="41" bodyend="41"/>
-        <references refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" compoundref="_ortho_poly_8_h" startline="20">b</references>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1a012dedf1c757a8ac3c999f2c6c2c6b05" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OrthoPoly::h</definition>
-        <argsstring>(const int n)=0</argsstring>
-        <name>h</name>
-        <qualifiedname>OrthoPoly::h</qualifiedname>
-        <reimplementedby refid="class_gen_lagu_1a9d7ecca4767fe280c50869b3a66b525b">h</reimplementedby>
-        <reimplementedby refid="class_legendre_1a3ff47311ca802bdf62979533b23bb947">h</reimplementedby>
-        <reimplementedby refid="class_ultra_1a1a071cc2dd0f100eb6682405bbcfe648">h</reimplementedby>
-        <reimplementedby refid="class_cheb1_1ab7dcbd54cb623cc67ba7cc366d73ca84">h</reimplementedby>
-        <reimplementedby refid="class_cheb2_1a9ddb27326d84b1e34210b8c1713c7b2c">h</reimplementedby>
-        <reimplementedby refid="class_hermite_1af5882ed3ef371ac816f721a4d5dbcced">h</reimplementedby>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="28" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_ortho_poly_1a789ce34b2842e2ddf958e0af56cdc4e6" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double OrthoPoly::w</definition>
-        <argsstring>(const double x)=0</argsstring>
-        <name>w</name>
-        <qualifiedname>OrthoPoly::w</qualifiedname>
-        <reimplementedby refid="class_gen_lagu_1a89233d639e24c4101f2c2ba1d530429b">w</reimplementedby>
-        <reimplementedby refid="class_legendre_1a0e7d5d53f303b11e78706f9368a690c8">w</reimplementedby>
-        <reimplementedby refid="class_ultra_1a91a7c07fff9ef042f830a3b699dfc2fe">w</reimplementedby>
-        <reimplementedby refid="class_cheb1_1a20b0b48615e0d4e46d9c9671b794885f">w</reimplementedby>
-        <reimplementedby refid="class_cheb2_1ac6cb9737949aaf8bbad129ee21609778">w</reimplementedby>
-        <reimplementedby refid="class_hermite_1a6d33ef9a7642dae5a29263e2de346669">w</reimplementedby>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="27" column="18"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>Cheb1</label>
-        <link refid="class_cheb1"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Cheb2</label>
-        <link refid="class_cheb2"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>GenLagu</label>
-        <link refid="class_gen_lagu"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Hermite</label>
-        <link refid="class_hermite"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Legendre</label>
-        <link refid="class_legendre"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
-      </node>
-      <node id="7">
-        <label>PVQuad</label>
-        <link refid="class_p_v_quad"/>
-        <childnode refid="6" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Ultra</label>
-        <link refid="class_ultra"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <location file="/home/weinberg/Projects/EXP/include/OrthoPoly.H" line="10" column="1" bodyfile="/home/weinberg/Projects/EXP/include/OrthoPoly.H" bodystart="11" bodyend="43"/>
-    <listofallmembers>
-      <member refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" prot="protected" virt="non-virtual"><scope>OrthoPoly</scope><name>a</name></member>
-      <member refid="class_ortho_poly_1ad31e77ccb4c55b23bf2e0c8312c28119" prot="protected" virt="non-virtual"><scope>OrthoPoly</scope><name>b</name></member>
-      <member refid="class_ortho_poly_1a8691a2e79b7d678a2f33c295a230ce48" prot="public" virt="pure-virtual"><scope>OrthoPoly</scope><name>coef1</name></member>
-      <member refid="class_ortho_poly_1a074c75f7b1758471d5ca9e0c9556adc7" prot="public" virt="pure-virtual"><scope>OrthoPoly</scope><name>coef2</name></member>
-      <member refid="class_ortho_poly_1a5a1ad9977808f1a4503ccde47b260b57" prot="public" virt="pure-virtual"><scope>OrthoPoly</scope><name>coef3</name></member>
-      <member refid="class_ortho_poly_1aa86a42c4a207651a43822242d198725b" prot="public" virt="pure-virtual"><scope>OrthoPoly</scope><name>coef4</name></member>
-      <member refid="class_ortho_poly_1a2477962944125247f6bb446ba361afaa" prot="private" virt="non-virtual"><scope>OrthoPoly</scope><name>coefs</name></member>
-      <member refid="class_ortho_poly_1afe8111b9a2946e381e7283a8e06da3b8" prot="public" virt="non-virtual"><scope>OrthoPoly</scope><name>f</name></member>
-      <member refid="class_ortho_poly_1afaaab0fc6afe43bc01271a549adfc96f" prot="public" virt="pure-virtual"><scope>OrthoPoly</scope><name>f0</name></member>
-      <member refid="class_ortho_poly_1a9e16af920759d1d259e492fab6c79100" prot="public" virt="pure-virtual"><scope>OrthoPoly</scope><name>f1</name></member>
-      <member refid="class_ortho_poly_1aed2903244bcd8423c11ddb3343f701c0" prot="public" virt="non-virtual"><scope>OrthoPoly</scope><name>fv</name></member>
-      <member refid="class_ortho_poly_1a954a4941a43f355ddb7e17185eca5052" prot="public" virt="non-virtual"><scope>OrthoPoly</scope><name>get_a</name></member>
-      <member refid="class_ortho_poly_1a5e664c78f30952123f31d15582e0bee2" prot="public" virt="non-virtual"><scope>OrthoPoly</scope><name>get_b</name></member>
-      <member refid="class_ortho_poly_1a012dedf1c757a8ac3c999f2c6c2c6b05" prot="public" virt="pure-virtual"><scope>OrthoPoly</scope><name>h</name></member>
-      <member refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" prot="protected" virt="non-virtual"><scope>OrthoPoly</scope><name>param</name></member>
-      <member refid="class_ortho_poly_1a789ce34b2842e2ddf958e0af56cdc4e6" prot="public" virt="pure-virtual"><scope>OrthoPoly</scope><name>w</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_ascii.xml b/doxyxml/class_out_ascii.xml
deleted file mode 100644
index 1f89b47..0000000
--- a/doxyxml/class_out_ascii.xml
+++ /dev/null
@@ -1,359 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_ascii" kind="class" language="C++" prot="public">
-    <compoundname>OutAscii</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_ascii_8_h" local="no">OutAscii.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_ascii_1aa1eed016b343d823fd60913dde58af5c" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutAscii::accel</definition>
-        <argsstring></argsstring>
-        <name>accel</name>
-        <qualifiedname>OutAscii::accel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="31" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutAscii.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_ascii_1aa88611a765a008191da8ec2161360921" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* OutAscii::c0</definition>
-        <argsstring></argsstring>
-        <name>c0</name>
-        <qualifiedname>OutAscii::c0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="33" column="13" bodyfile="/home/weinberg/Projects/EXP/src/OutAscii.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_ascii_1aea788a1bf15d71b8eea8bd8b1b017926" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutAscii::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutAscii::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="27" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutAscii.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_ascii_1a49c57b97979dcc3dd526ee2209a51cae" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutAscii::name</definition>
-        <argsstring></argsstring>
-        <name>name</name>
-        <qualifiedname>OutAscii::name</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="28" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutAscii.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_ascii_1ab82f5ecbc27f99c633fde97958034c21" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutAscii::nbeg</definition>
-        <argsstring></argsstring>
-        <name>nbeg</name>
-        <qualifiedname>OutAscii::nbeg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="30" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutAscii.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_ascii_1a4ffbb66afee1ceee35945336ab780b18" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutAscii::prev</definition>
-        <argsstring></argsstring>
-        <name>prev</name>
-        <qualifiedname>OutAscii::prev</qualifiedname>
-        <initializer>= -std::numeric_limits&lt;double&gt;::max()</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="29" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OutAscii.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_ascii_1a3d3ba858335b458cdc729ea38357edeb" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutAscii::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutAscii::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="38" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutAscii.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_out_ascii_1acb6e57eb525df9dd38ed298d17b9d1d9" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutAscii::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutAscii::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="35" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_out_ascii_1ac093c171f55a4ec337badc1fced97725" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutAscii::OutAscii</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutAscii</name>
-        <qualifiedname>OutAscii::OutAscii</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="43" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_ascii_1a1c78208555ad564ca0fc2e2ce492a528" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutAscii::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutAscii::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Provided by derived class to generate some output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="52" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Write phase-space dumps for a single component at regular intervals in ascii format. Each line contains: mass, pos[3], vel[3], acc[3], pot, potext, ival[niattr], dval[ndattr]</para>
-<para>Each dump is written into a new file label as <computeroutput>filename.n</computeroutput> where is begins at <computeroutput>nbeg</computeroutput> and incremented by 1 after each file is written.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the output file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between dumps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nintsub</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the substep number to perform outputs </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nbeg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is suffix of the first phase space dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>name</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>of the desired component </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>accel</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to 1 means print out accelerations </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutAscii</label>
-        <link refid="class_out_ascii"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="4">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="7">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="8" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>OutAscii</label>
-        <link refid="class_out_ascii"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="6">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutAscii.H" line="22" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutAscii.H" bodystart="23" bodyend="54"/>
-    <listofallmembers>
-      <member refid="class_out_ascii_1aa1eed016b343d823fd60913dde58af5c" prot="private" virt="non-virtual"><scope>OutAscii</scope><name>accel</name></member>
-      <member refid="class_out_ascii_1aa88611a765a008191da8ec2161360921" prot="private" virt="non-virtual"><scope>OutAscii</scope><name>c0</name></member>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutAscii</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutAscii</scope><name>current_keys</name></member>
-      <member refid="class_out_ascii_1aea788a1bf15d71b8eea8bd8b1b017926" prot="private" virt="non-virtual"><scope>OutAscii</scope><name>filename</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutAscii</scope><name>id</name></member>
-      <member refid="class_out_ascii_1acb6e57eb525df9dd38ed298d17b9d1d9" prot="private" virt="virtual"><scope>OutAscii</scope><name>initialize</name></member>
-      <member refid="class_out_ascii_1a49c57b97979dcc3dd526ee2209a51cae" prot="private" virt="non-virtual"><scope>OutAscii</scope><name>name</name></member>
-      <member refid="class_out_ascii_1ab82f5ecbc27f99c633fde97958034c21" prot="private" virt="non-virtual"><scope>OutAscii</scope><name>nbeg</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutAscii</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutAscii</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutAscii</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_ascii_1ac093c171f55a4ec337badc1fced97725" prot="public" virt="non-virtual"><scope>OutAscii</scope><name>OutAscii</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutAscii</scope><name>Output</name></member>
-      <member refid="class_out_ascii_1a4ffbb66afee1ceee35945336ab780b18" prot="private" virt="non-virtual"><scope>OutAscii</scope><name>prev</name></member>
-      <member refid="class_out_ascii_1a1c78208555ad564ca0fc2e2ce492a528" prot="public" virt="virtual"><scope>OutAscii</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutAscii</scope><name>stopWatch</name></member>
-      <member refid="class_output_1a69f42df0c1eab6a81fb2346e59c66943" prot="protected" virt="non-virtual"><scope>OutAscii</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutAscii</scope><name>unmatched</name></member>
-      <member refid="class_out_ascii_1a3d3ba858335b458cdc729ea38357edeb" prot="private" virt="non-virtual"><scope>OutAscii</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutAscii</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_c_h_k_p_t.xml b/doxyxml/class_out_c_h_k_p_t.xml
deleted file mode 100644
index 0c158eb..0000000
--- a/doxyxml/class_out_c_h_k_p_t.xml
+++ /dev/null
@@ -1,264 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_c_h_k_p_t" kind="class" language="C++" prot="public">
-    <compoundname>OutCHKPT</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_c_h_k_p_t_8_h" local="no">OutCHKPT.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_c_h_k_p_t_1ab8f0c868be3c6d3a756da440364b7cbc" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutCHKPT::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutCHKPT::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="27" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPT.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_c_h_k_p_t_1a681f23c5c00a8b9504f9171a4dc62ff5" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutCHKPT::mpio</definition>
-        <argsstring></argsstring>
-        <name>mpio</name>
-        <qualifiedname>OutCHKPT::mpio</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="28" column="14" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPT.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_c_h_k_p_t_1ac558cbd1533c1d8f041dc812e62b4475" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutCHKPT::nagg</definition>
-        <argsstring></argsstring>
-        <name>nagg</name>
-        <qualifiedname>OutCHKPT::nagg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="27" column="24" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPT.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_c_h_k_p_t_1a4c59f11d51d3c0fe67a7b1c3abcde9fb" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutCHKPT::timer</definition>
-        <argsstring></argsstring>
-        <name>timer</name>
-        <qualifiedname>OutCHKPT::timer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="28" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPT.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_c_h_k_p_t_1a97110c37dda49518829e6e0ef346ebd3" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutCHKPT::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutCHKPT::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="33" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPT.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_out_c_h_k_p_t_1aa6eb4b8a25a08e746160c3f888a07de3" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutCHKPT::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutCHKPT::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="30" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_out_c_h_k_p_t_1ab6d2039d671cba8faef45a13784cdf18" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutCHKPT::OutCHKPT</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutCHKPT</name>
-        <qualifiedname>OutCHKPT::OutCHKPT</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="38" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_c_h_k_p_t_1a918198b8462ca963530e8477ab32790a" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutCHKPT::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutCHKPT::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Provided by derived class to generate some output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="47" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Writes a checkpoint file at regular intervals</para>
-<para>Previously written checkpoint file will be rename to &lt;filename&gt;.bak</para>
-<para>Sending the root process a SIGHUP will cause the first of <ref refid="class_out_p_s" kindref="compound">OutPS</ref>, <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref>, <ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref>, <ref refid="class_out_p_s_q" kindref="compound">OutPSQ</ref>, or <ref refid="class_out_c_h_k_p_t" kindref="compound">OutCHKPT</ref> in the <ref refid="class_output" kindref="compound">Output</ref> list to execute. This may not always be possible to signal for batch scheduled jobs.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the output file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between dumps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mpio</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true uses MPI-IO output with arbitrarily sequenced particles </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nagg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of MPI-IO aggregators </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutCHKPT</label>
-        <link refid="class_out_c_h_k_p_t"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutCHKPT</label>
-        <link refid="class_out_c_h_k_p_t"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutCHKPT.H" line="22" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPT.H" bodystart="23" bodyend="49"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutCHKPT</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutCHKPT</scope><name>current_keys</name></member>
-      <member refid="class_out_c_h_k_p_t_1ab8f0c868be3c6d3a756da440364b7cbc" prot="private" virt="non-virtual"><scope>OutCHKPT</scope><name>filename</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutCHKPT</scope><name>id</name></member>
-      <member refid="class_out_c_h_k_p_t_1aa6eb4b8a25a08e746160c3f888a07de3" prot="private" virt="virtual"><scope>OutCHKPT</scope><name>initialize</name></member>
-      <member refid="class_out_c_h_k_p_t_1a681f23c5c00a8b9504f9171a4dc62ff5" prot="private" virt="non-virtual"><scope>OutCHKPT</scope><name>mpio</name></member>
-      <member refid="class_out_c_h_k_p_t_1ac558cbd1533c1d8f041dc812e62b4475" prot="private" virt="non-virtual"><scope>OutCHKPT</scope><name>nagg</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutCHKPT</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutCHKPT</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutCHKPT</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_c_h_k_p_t_1ab6d2039d671cba8faef45a13784cdf18" prot="public" virt="non-virtual"><scope>OutCHKPT</scope><name>OutCHKPT</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutCHKPT</scope><name>Output</name></member>
-      <member refid="class_out_c_h_k_p_t_1a918198b8462ca963530e8477ab32790a" prot="public" virt="virtual"><scope>OutCHKPT</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutCHKPT</scope><name>stopWatch</name></member>
-      <member refid="class_out_c_h_k_p_t_1a4c59f11d51d3c0fe67a7b1c3abcde9fb" prot="private" virt="non-virtual"><scope>OutCHKPT</scope><name>timer</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_c_h_k_p_t_q.xml b/doxyxml/class_out_c_h_k_p_t_q.xml
deleted file mode 100644
index a8c373f..0000000
--- a/doxyxml/class_out_c_h_k_p_t_q.xml
+++ /dev/null
@@ -1,264 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_c_h_k_p_t_q" kind="class" language="C++" prot="public">
-    <compoundname>OutCHKPTQ</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_c_h_k_p_t_q_8_h" local="no">OutCHKPTQ.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_c_h_k_p_t_q_1a0aff4474489d36c956cee74d41476880" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutCHKPTQ::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutCHKPTQ::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" line="29" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" bodystart="29" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool OutCHKPTQ::mpio</definition>
-        <argsstring></argsstring>
-        <name>mpio</name>
-        <qualifiedname>OutCHKPTQ::mpio</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" line="30" column="14" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" bodystart="30" bodyend="-1"/>
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-        <type>std::string</type>
-        <definition>std::string OutCHKPTQ::nagg</definition>
-        <argsstring></argsstring>
-        <name>nagg</name>
-        <qualifiedname>OutCHKPTQ::nagg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type>bool</type>
-        <definition>bool OutCHKPTQ::timer</definition>
-        <argsstring></argsstring>
-        <name>timer</name>
-        <qualifiedname>OutCHKPTQ::timer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" line="30" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
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-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutCHKPTQ::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutCHKPTQ::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" line="35" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" bodystart="35" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void OutCHKPTQ::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutCHKPTQ::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" line="32" column="8"/>
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-        <type></type>
-        <definition>OutCHKPTQ::OutCHKPTQ</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutCHKPTQ</name>
-        <qualifiedname>OutCHKPTQ::OutCHKPTQ</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" line="40" column="3"/>
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-      <memberdef kind="function" id="class_out_c_h_k_p_t_q_1a374f06d27eac24ea4859c91640f604c4" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutCHKPTQ::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutCHKPTQ::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Provided by derived class to generate some output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" line="49" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Writes a checkpoint file at regular intervals from each node in component pieces. These pieces may be reassembled from the info in an &quot;instruction&quot; file.</para>
-<para>Previously written checkpoint file will be rename to &lt;filename&gt;.bak</para>
-<para>Sending the root process a SIGHUP will cause the first of <ref refid="class_out_p_s" kindref="compound">OutPS</ref>, <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref>, <ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref>, <ref refid="class_out_p_s_q" kindref="compound">OutPSQ</ref>, <ref refid="class_out_c_h_k_p_t" kindref="compound">OutCHKPT</ref>, or <ref refid="class_out_c_h_k_p_t_q" kindref="compound">OutCHKPTQ</ref> in the <ref refid="class_output" kindref="compound">Output</ref> list to execute. This may not always be possible to signal for batch scheduled jobs.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the output file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between dumps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mpio</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true uses MPI-IO output with arbitrarily sequenced particles </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nagg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of MPI-IO aggregators </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutCHKPTQ</label>
-        <link refid="class_out_c_h_k_p_t_q"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutCHKPTQ</label>
-        <link refid="class_out_c_h_k_p_t_q"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" line="24" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutCHKPTQ.H" bodystart="25" bodyend="51"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutCHKPTQ</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutCHKPTQ</scope><name>current_keys</name></member>
-      <member refid="class_out_c_h_k_p_t_q_1a0aff4474489d36c956cee74d41476880" prot="private" virt="non-virtual"><scope>OutCHKPTQ</scope><name>filename</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutCHKPTQ</scope><name>id</name></member>
-      <member refid="class_out_c_h_k_p_t_q_1a93df82d18ab9b17756377f4f5dd4f082" prot="private" virt="virtual"><scope>OutCHKPTQ</scope><name>initialize</name></member>
-      <member refid="class_out_c_h_k_p_t_q_1aad002465c8a6a1fcef5e0b93ce6efd67" prot="private" virt="non-virtual"><scope>OutCHKPTQ</scope><name>mpio</name></member>
-      <member refid="class_out_c_h_k_p_t_q_1a34e1763bcac91b52be6f5f9f4d4c409c" prot="private" virt="non-virtual"><scope>OutCHKPTQ</scope><name>nagg</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutCHKPTQ</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutCHKPTQ</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutCHKPTQ</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_c_h_k_p_t_q_1a507af748fe9b10eac7156f919bfdee18" prot="public" virt="non-virtual"><scope>OutCHKPTQ</scope><name>OutCHKPTQ</name></member>
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-      <member refid="class_out_c_h_k_p_t_q_1a374f06d27eac24ea4859c91640f604c4" prot="public" virt="virtual"><scope>OutCHKPTQ</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutCHKPTQ</scope><name>stopWatch</name></member>
-      <member refid="class_out_c_h_k_p_t_q_1a046f4958c633c32be67f8659b125bd31" prot="private" virt="non-virtual"><scope>OutCHKPTQ</scope><name>timer</name></member>
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-      <member refid="class_out_c_h_k_p_t_q_1a415958ec14e9d43631f23dda432b8604" prot="private" virt="non-virtual"><scope>OutCHKPTQ</scope><name>valid_keys</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_calbr.xml b/doxyxml/class_out_calbr.xml
deleted file mode 100644
index 2fa71b8..0000000
--- a/doxyxml/class_out_calbr.xml
+++ /dev/null
@@ -1,540 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_calbr" kind="class" language="C++" prot="public">
-    <compoundname>OutCalbr</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_calbr_8_h" local="no">OutCalbr.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_calbr_1ac5a7ec7e61ef82ea72dfa5934648af05" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutCalbr::dE</definition>
-        <argsstring></argsstring>
-        <name>dE</name>
-        <qualifiedname>OutCalbr::dE</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCalbr.H" line="32" column="20" bodyfile="/home/weinberg/Projects/EXP/src/OutCalbr.H" bodystart="32" bodyend="-1"/>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; OutCalbr::deltaE</definition>
-        <argsstring></argsstring>
-        <name>deltaE</name>
-        <qualifiedname>OutCalbr::deltaE</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/OutCalbr.H" line="29" column="18" bodyfile="/home/weinberg/Projects/EXP/src/OutCalbr.H" bodystart="29" bodyend="-1"/>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; OutCalbr::deltaE1</definition>
-        <argsstring></argsstring>
-        <name>deltaE1</name>
-        <qualifiedname>OutCalbr::deltaE1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type>std::vector&lt; double &gt;</type>
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-        <argsstring></argsstring>
-        <name>deltaLx</name>
-        <qualifiedname>OutCalbr::deltaLx</qualifiedname>
-        <briefdescription>
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-        <name>deltaLx1</name>
-        <qualifiedname>OutCalbr::deltaLx1</qualifiedname>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; OutCalbr::deltaLy</definition>
-        <argsstring></argsstring>
-        <name>deltaLy</name>
-        <qualifiedname>OutCalbr::deltaLy</qualifiedname>
-        <briefdescription>
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-        <definition>std::vector&lt;double&gt; OutCalbr::deltaLy1</definition>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; OutCalbr::deltaLz</definition>
-        <argsstring></argsstring>
-        <name>deltaLz</name>
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-        <detaileddescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; OutCalbr::deltaLz1</definition>
-        <argsstring></argsstring>
-        <name>deltaLz1</name>
-        <qualifiedname>OutCalbr::deltaLz1</qualifiedname>
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-        </briefdescription>
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-        </detaileddescription>
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-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; OutCalbr::Ec</definition>
-        <argsstring></argsstring>
-        <name>Ec</name>
-        <qualifiedname>OutCalbr::Ec</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <definition>double OutCalbr::Emax</definition>
-        <argsstring></argsstring>
-        <name>Emax</name>
-        <qualifiedname>OutCalbr::Emax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double OutCalbr::Emin</definition>
-        <argsstring></argsstring>
-        <name>Emin</name>
-        <qualifiedname>OutCalbr::Emin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::string</type>
-        <definition>std::string OutCalbr::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutCalbr::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; unsigned &gt;</type>
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-        <argsstring></argsstring>
-        <name>ncnt</name>
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-        <briefdescription>
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-        </inbodydescription>
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-        <name>ncnt1</name>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
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-        <type>int</type>
-        <definition>int OutCalbr::num</definition>
-        <argsstring></argsstring>
-        <name>num</name>
-        <qualifiedname>OutCalbr::num</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double OutCalbr::prev</definition>
-        <argsstring></argsstring>
-        <name>prev</name>
-        <qualifiedname>OutCalbr::prev</qualifiedname>
-        <initializer>= -std::numeric_limits&lt;double&gt;::max()</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* OutCalbr::tcomp</definition>
-        <argsstring></argsstring>
-        <name>tcomp</name>
-        <qualifiedname>OutCalbr::tcomp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutCalbr::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutCalbr::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
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-        <argsstring>(void)</argsstring>
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-        <qualifiedname>OutCalbr::initialize</qualifiedname>
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-        <param>
-          <type>void</type>
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-<para>Used to assign additional specific parameters, create storage, etc. </para>
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-        </detaileddescription>
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-        <definition>void OutCalbr::set_energies</definition>
-        <argsstring>(void)</argsstring>
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-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
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-          <type>const YAML::Node &amp;</type>
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-<para>Constructor. </para>
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-        <param>
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-        <param>
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-<para>Generate the output. </para>
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-<para>is the current time step used to decide whether or not to dump </para>
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-</parameteritem>
-<parameteritem>
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-<parametername>last</parametername>
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-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
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-<para>Compute changes in energy and angular momentum per orbit and provide rms changes as a function of energy</para>
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-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>of the output file</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>name</parametername>
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-<parameterdescription>
-<para>of the component to dump</para>
-</parameterdescription>
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-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
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-<para>is the frequency between file updates</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>N</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>are the number of energy bins</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-The routine assumes that the input file is defined with four double attributes to hold the energy and angular momentum vector. </para>
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-        <label>thrd_pass_PotAccel</label>
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-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_coef.xml b/doxyxml/class_out_coef.xml
deleted file mode 100644
index f237afb..0000000
--- a/doxyxml/class_out_coef.xml
+++ /dev/null
@@ -1,312 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_coef" kind="class" language="C++" prot="public">
-    <compoundname>OutCoef</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_coef_8_h" local="no">OutCoef.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_coef_1a61424a6820881114f27fc4739d7ae092" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutCoef::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutCoef::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="21" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutCoef.H" bodystart="21" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_coef_1a0f3c9ffb790b9ed5d734fe0f0f321a20" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutCoef::native</definition>
-        <argsstring></argsstring>
-        <name>native</name>
-        <qualifiedname>OutCoef::native</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="24" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutCoef.H" bodystart="24" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_coef_1a1cce1046b87c56c64e45e23ae01cffa7" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutCoef::prev</definition>
-        <argsstring></argsstring>
-        <name>prev</name>
-        <qualifiedname>OutCoef::prev</qualifiedname>
-        <initializer>= -std::numeric_limits&lt;double&gt;::max()</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OutCoef.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_coef_1ae5d416d4c5dacbb4e1ebb4d8f16b342f" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* OutCoef::tcomp</definition>
-        <argsstring></argsstring>
-        <name>tcomp</name>
-        <qualifiedname>OutCoef::tcomp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="23" column="13" bodyfile="/home/weinberg/Projects/EXP/src/OutCoef.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_coef_1a756249356030a2b5667c50bb6c919536" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutCoef::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutCoef::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="29" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutCoef.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_out_coef_1a004865edcd8ef66cd83adff57b49c564" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutCoef::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutCoef::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="26" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_out_coef_1a104cb10e976d385b1d843a134f3383df" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutCoef::OutCoef</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutCoef</name>
-        <qualifiedname>OutCoef::OutCoef</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="34" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_coef_1a1bc2ffd2ed33add9431a473b41eef9b8" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutCoef::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutCoef::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Generate the output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="43" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Dump coefficients at each interval</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>of the coefficient file</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>name</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>of the component to dump</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the frequency between file updates</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>native</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true uses old-style native coefficient format </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutCoef</label>
-        <link refid="class_out_coef"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="4">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="7">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="8" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>OutCoef</label>
-        <link refid="class_out_coef"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>tcomp</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="6">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutCoef.H" line="16" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutCoef.H" bodystart="17" bodyend="45"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutCoef</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutCoef</scope><name>current_keys</name></member>
-      <member refid="class_out_coef_1a61424a6820881114f27fc4739d7ae092" prot="private" virt="non-virtual"><scope>OutCoef</scope><name>filename</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutCoef</scope><name>id</name></member>
-      <member refid="class_out_coef_1a004865edcd8ef66cd83adff57b49c564" prot="private" virt="virtual"><scope>OutCoef</scope><name>initialize</name></member>
-      <member refid="class_out_coef_1a0f3c9ffb790b9ed5d734fe0f0f321a20" prot="private" virt="non-virtual"><scope>OutCoef</scope><name>native</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutCoef</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutCoef</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutCoef</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_coef_1a104cb10e976d385b1d843a134f3383df" prot="public" virt="non-virtual"><scope>OutCoef</scope><name>OutCoef</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutCoef</scope><name>Output</name></member>
-      <member refid="class_out_coef_1a1cce1046b87c56c64e45e23ae01cffa7" prot="private" virt="non-virtual"><scope>OutCoef</scope><name>prev</name></member>
-      <member refid="class_out_coef_1a1bc2ffd2ed33add9431a473b41eef9b8" prot="public" virt="virtual"><scope>OutCoef</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutCoef</scope><name>stopWatch</name></member>
-      <member refid="class_out_coef_1ae5d416d4c5dacbb4e1ebb4d8f16b342f" prot="private" virt="non-virtual"><scope>OutCoef</scope><name>tcomp</name></member>
-      <member refid="class_output_1a69f42df0c1eab6a81fb2346e59c66943" prot="protected" virt="non-virtual"><scope>OutCoef</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutCoef</scope><name>unmatched</name></member>
-      <member refid="class_out_coef_1a756249356030a2b5667c50bb6c919536" prot="private" virt="non-virtual"><scope>OutCoef</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutCoef</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_diag.xml b/doxyxml/class_out_diag.xml
deleted file mode 100644
index 764cccb..0000000
--- a/doxyxml/class_out_diag.xml
+++ /dev/null
@@ -1,324 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_diag" kind="class" language="C++" prot="public">
-    <compoundname>OutDiag</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_diag_8_h" local="no">OutDiag.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_diag_1a8766f4bf4255d618eaca1652517266c2" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutDiag::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutDiag::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="12" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="12" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_diag_1a61b84dfe38ddc430791e3a38bad5b033" prot="private" static="no" mutable="no">
-        <type>std::list&lt; <ref refid="class_component" kindref="compound">Component</ref> * &gt;</type>
-        <definition>std::list&lt;Component*&gt; OutDiag::lcomp</definition>
-        <argsstring></argsstring>
-        <name>lcomp</name>
-        <qualifiedname>OutDiag::lcomp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="13" column="13" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="13" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_diag_1af3a7ebf633010ba6f5371fe415b05626" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::string &gt;</type>
-        <definition>std::vector&lt;std::string&gt; OutDiag::names</definition>
-        <argsstring></argsstring>
-        <name>names</name>
-        <qualifiedname>OutDiag::names</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="14" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="14" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_diag_1ac57d6a72db2ca3c561966301eb61a413" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutDiag::NUM</definition>
-        <argsstring></argsstring>
-        <name>NUM</name>
-        <qualifiedname>OutDiag::NUM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="17" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="17" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_diag_1a1403d00b1e898227b7e2c8bb38bb74ee" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutDiag::PHI</definition>
-        <argsstring></argsstring>
-        <name>PHI</name>
-        <qualifiedname>OutDiag::PHI</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="18" column="16" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_diag_1a04c6ef3c364c9573bc34a91b99d9b4fa" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutDiag::prev</definition>
-        <argsstring></argsstring>
-        <name>prev</name>
-        <qualifiedname>OutDiag::prev</qualifiedname>
-        <initializer>= -std::numeric_limits&lt;double&gt;::max()</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="15" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="15" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_diag_1abcbf8f4922db87da05b2abc4b6c3671c" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutDiag::RMAX</definition>
-        <argsstring></argsstring>
-        <name>RMAX</name>
-        <qualifiedname>OutDiag::RMAX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="18" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_diag_1aa021c5de3050479f2229b3fe41ed4d60" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutDiag::RMIN</definition>
-        <argsstring></argsstring>
-        <name>RMIN</name>
-        <qualifiedname>OutDiag::RMIN</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="18" column="20" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_diag_1a6d14e3dc8e19aeb5b65a0e047a2558ae" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutDiag::THETA</definition>
-        <argsstring></argsstring>
-        <name>THETA</name>
-        <qualifiedname>OutDiag::THETA</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="18" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
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-      <memberdef kind="variable" id="class_out_diag_1aff27312b0ad45e479a7ab03b66bcb89e" prot="private" static="yes" mutable="no">
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-        <definition>const std::set&lt;std::string&gt; OutDiag::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutDiag::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="24" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="24" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void OutDiag::header</definition>
-        <argsstring>(ostream &amp;out)</argsstring>
-        <name>header</name>
-        <qualifiedname>OutDiag::header</qualifiedname>
-        <param>
-          <type>ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="21" column="8"/>
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-        <name>initialize</name>
-        <qualifiedname>OutDiag::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
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-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="20" column="8"/>
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-        <type></type>
-        <definition>OutDiag::OutDiag</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutDiag</name>
-        <qualifiedname>OutDiag::OutDiag</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="29" column="3"/>
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-      <memberdef kind="function" id="class_out_diag_1af9f72ba95e44ebae58f3476b747751f7" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutDiag::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutDiag::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Generate the output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="38" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Print field quantities for spherical and cylindrical bases. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutDiag</label>
-        <link refid="class_out_diag"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutDiag</label>
-        <link refid="class_out_diag"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutDiag.H" line="7" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutDiag.H" bodystart="8" bodyend="40"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutDiag</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutDiag</scope><name>current_keys</name></member>
-      <member refid="class_out_diag_1a8766f4bf4255d618eaca1652517266c2" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>filename</name></member>
-      <member refid="class_out_diag_1a5965e4614910a5d89f2b2912ad06906f" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>header</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutDiag</scope><name>id</name></member>
-      <member refid="class_out_diag_1a8d711333b84ec6d18d3bc443dda2d362" prot="private" virt="virtual"><scope>OutDiag</scope><name>initialize</name></member>
-      <member refid="class_out_diag_1a61b84dfe38ddc430791e3a38bad5b033" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>lcomp</name></member>
-      <member refid="class_out_diag_1af3a7ebf633010ba6f5371fe415b05626" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>names</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutDiag</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutDiag</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutDiag</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_diag_1ac57d6a72db2ca3c561966301eb61a413" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>NUM</name></member>
-      <member refid="class_out_diag_1aa65d264636e4d5d012f19ef7d9f9911f" prot="public" virt="non-virtual"><scope>OutDiag</scope><name>OutDiag</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutDiag</scope><name>Output</name></member>
-      <member refid="class_out_diag_1a1403d00b1e898227b7e2c8bb38bb74ee" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>PHI</name></member>
-      <member refid="class_out_diag_1a04c6ef3c364c9573bc34a91b99d9b4fa" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>prev</name></member>
-      <member refid="class_out_diag_1abcbf8f4922db87da05b2abc4b6c3671c" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>RMAX</name></member>
-      <member refid="class_out_diag_1aa021c5de3050479f2229b3fe41ed4d60" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>RMIN</name></member>
-      <member refid="class_out_diag_1af9f72ba95e44ebae58f3476b747751f7" prot="public" virt="virtual"><scope>OutDiag</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutDiag</scope><name>stopWatch</name></member>
-      <member refid="class_out_diag_1a6d14e3dc8e19aeb5b65a0e047a2558ae" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>THETA</name></member>
-      <member refid="class_output_1a69f42df0c1eab6a81fb2346e59c66943" prot="protected" virt="non-virtual"><scope>OutDiag</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutDiag</scope><name>unmatched</name></member>
-      <member refid="class_out_diag_1aff27312b0ad45e479a7ab03b66bcb89e" prot="private" virt="non-virtual"><scope>OutDiag</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutDiag</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_frac.xml b/doxyxml/class_out_frac.xml
deleted file mode 100644
index 0ec0a38..0000000
--- a/doxyxml/class_out_frac.xml
+++ /dev/null
@@ -1,327 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_frac" kind="class" language="C++" prot="public">
-    <compoundname>OutFrac</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_frac_8_h" local="no">OutFrac.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_frac_1a497ca38450fc77f060333582574d7715" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutFrac::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutFrac::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="23" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutFrac.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_frac_1a352522c1076c942a3a5c060817519a22" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutFrac::numQuant</definition>
-        <argsstring></argsstring>
-        <name>numQuant</name>
-        <qualifiedname>OutFrac::numQuant</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="25" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutFrac.H" bodystart="25" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_frac_1acdea4b058d0af170b53fb5342d316c24" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutFrac::prev</definition>
-        <argsstring></argsstring>
-        <name>prev</name>
-        <qualifiedname>OutFrac::prev</qualifiedname>
-        <initializer>= -std::numeric_limits&lt;double&gt;::max()</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OutFrac.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_frac_1adbe7a649168cf47314f0d5f9edb2d689" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; OutFrac::Quant</definition>
-        <argsstring></argsstring>
-        <name>Quant</name>
-        <qualifiedname>OutFrac::Quant</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="26" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OutFrac.H" bodystart="26" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_frac_1a6d394a6f4d0a7bb538a0497c9c10018c" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* OutFrac::tcomp</definition>
-        <argsstring></argsstring>
-        <name>tcomp</name>
-        <qualifiedname>OutFrac::tcomp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="24" column="13" bodyfile="/home/weinberg/Projects/EXP/src/OutFrac.H" bodystart="24" bodyend="-1"/>
-      </memberdef>
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-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_frac_1ab02e2ffb275739e0c0d01bc99c286571" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutFrac::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutFrac::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="31" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutFrac.H" bodystart="31" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void OutFrac::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutFrac::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="28" column="8"/>
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-        <type></type>
-        <definition>OutFrac::OutFrac</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutFrac</name>
-        <qualifiedname>OutFrac::OutFrac</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="36" column="3"/>
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-        <type>void</type>
-        <definition>void OutFrac::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutFrac::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Generate the output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutFrac.H" line="45" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Dump mass fractions at each interval</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>of the fraction file</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>name</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>of the component to dump</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the frequency between file updates</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>frac(n)</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>are the quantiles </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutFrac</label>
-        <link refid="class_out_frac"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="4">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="7">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="8" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>OutFrac</label>
-        <link refid="class_out_frac"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>tcomp</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
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diff --git a/doxyxml/class_out_log.xml b/doxyxml/class_out_log.xml
deleted file mode 100644
index f6cf1ce..0000000
--- a/doxyxml/class_out_log.xml
+++ /dev/null
@@ -1,927 +0,0 @@
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-        </inbodydescription>
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; OutLog::eptotx</definition>
-        <argsstring></argsstring>
-        <name>eptotx</name>
-        <qualifiedname>OutLog::eptotx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; OutLog::eptotx1</definition>
-        <argsstring></argsstring>
-        <name>eptotx1</name>
-        <qualifiedname>OutLog::eptotx1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_out_log_1af5f1fe665d6f749f180cab802a0a55f4" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutLog::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutLog::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="53" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="53" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1aeca69382ffe6ca5e0e228bb919705022" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutLog::firstime</definition>
-        <argsstring></argsstring>
-        <name>firstime</name>
-        <qualifiedname>OutLog::firstime</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="62" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="62" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1aed7845e6611279a44d427e7f7c669961" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutLog::laststep</definition>
-        <argsstring></argsstring>
-        <name>laststep</name>
-        <qualifiedname>OutLog::laststep</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="55" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_log_1a9b8f1ad5dd6997147c18d4a627d93698" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutLog::lastwtime</definition>
-        <argsstring></argsstring>
-        <name>lastwtime</name>
-        <qualifiedname>OutLog::lastwtime</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="58" column="19" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="58" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1a3537ffc52d6c59df1d6ae0476505e81c" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; OutLog::mtot</definition>
-        <argsstring></argsstring>
-        <name>mtot</name>
-        <qualifiedname>OutLog::mtot</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="66" column="11" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="66" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1a46e809d60bcf51f1683d4d5f23c3c8ff" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; OutLog::mtot1</definition>
-        <argsstring></argsstring>
-        <name>mtot1</name>
-        <qualifiedname>OutLog::mtot1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="66" column="16" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="66" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1ade2efef9dfb63fc7ae39fc8feca046a7" prot="private" static="no" mutable="no">
-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; OutLog::nbodies</definition>
-        <argsstring></argsstring>
-        <name>nbodies</name>
-        <qualifiedname>OutLog::nbodies</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="64" column="14" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="64" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1a629a94eeb01a8eab82f668b619ef146d" prot="private" static="no" mutable="no">
-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; OutLog::nbodies1</definition>
-        <argsstring></argsstring>
-        <name>nbodies1</name>
-        <qualifiedname>OutLog::nbodies1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="64" column="22" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="64" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1ac9c1d9ca704cd7ed2247d5abb5000222" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutLog::nfreq</definition>
-        <argsstring></argsstring>
-        <name>nfreq</name>
-        <qualifiedname>OutLog::nfreq</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="54" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="54" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1a2e38610d867ddf5057dc93bf0b46ce56" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; OutLog::pos0</definition>
-        <argsstring></argsstring>
-        <name>pos0</name>
-        <qualifiedname>OutLog::pos0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="74" column="33" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="74" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1a45f920cd6940854c6df93a220b381956" prot="private" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; OutLog::posL</definition>
-        <argsstring></argsstring>
-        <name>posL</name>
-        <qualifiedname>OutLog::posL</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="75" column="31" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="75" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1a08f62b2aac09b9957e6e3cafa5e9a148" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutLog::precision</definition>
-        <argsstring></argsstring>
-        <name>precision</name>
-        <qualifiedname>OutLog::precision</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="56" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="56" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_out_log_1ae74e4331db6c6d138f5dd39cbf7df5a6" prot="private" static="no" mutable="no">
-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; OutLog::used</definition>
-        <argsstring></argsstring>
-        <name>used</name>
-        <qualifiedname>OutLog::used</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="65" column="14" bodyfile="/home/weinberg/Projects/EXP/src/OutLog.H" bodystart="65" bodyend="-1"/>
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-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; OutLog::used1</definition>
-        <argsstring></argsstring>
-        <name>used1</name>
-        <qualifiedname>OutLog::used1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; OutLog::vel0</definition>
-        <argsstring></argsstring>
-        <name>vel0</name>
-        <qualifiedname>OutLog::vel0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <argsstring></argsstring>
-        <name>velL</name>
-        <qualifiedname>OutLog::velL</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
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-        <type>const std::set&lt; std::string &gt;</type>
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-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutLog::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
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-        <argsstring>[][20]</argsstring>
-        <name>lab_component</name>
-        <qualifiedname>OutLog::lab_component</qualifiedname>
-        <briefdescription>
-<para>Per-component column labels. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>char</type>
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-        <argsstring>[][19]</argsstring>
-        <name>lab_global</name>
-        <qualifiedname>OutLog::lab_global</qualifiedname>
-        <briefdescription>
-<para>Global column labels. </para>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
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-        <type>const int</type>
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-        <argsstring></argsstring>
-        <name>num_component</name>
-        <qualifiedname>OutLog::num_component</qualifiedname>
-        <initializer>= 20</initializer>
-        <briefdescription>
-<para>Number of per-component entries. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>const int</type>
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-        <argsstring></argsstring>
-        <name>num_global</name>
-        <qualifiedname>OutLog::num_global</qualifiedname>
-        <initializer>= 19</initializer>
-        <briefdescription>
-<para>Number of global entries. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <definition>void OutLog::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutLog::initialize</qualifiedname>
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-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <type></type>
-        <definition>OutLog::OutLog</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutLog</name>
-        <qualifiedname>OutLog::OutLog</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>line</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>token list of specific parameters </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
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-        <type>void</type>
-        <definition>void OutLog::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutLog::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Generate output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>the current step number (used e.g. to decide whether or not to write output </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current multistep level to decide whether or not to dump multisteps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>if true, output is generated independent of the step number </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutLog.H" line="105" column="8"/>
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-    </sectiondef>
-    <briefdescription>
-<para>Log vital statistics every n steps. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>New version of log file puts all entries on a single line. This makes for difficult human reading but great for machines.</para>
-<para>Centers of mass, Centers of velocity, Virial of Clausius and 2T/VC will be computed for each component</para>
-<para>NB: the &quot;Virial of Clausius&quot; is a better indicatator of the true potential energy for multiple components or external forces</para>
-<para>Current ordering (will be labeled in the file):<itemizedlist>
-<listitem><para>Global statistics<orderedlist>
-<listitem><para>Current time</para>
-</listitem></orderedlist>
-</para>
-</listitem></itemizedlist>
-</para>
-<para>Total mass<orderedlist>
-<listitem><para>Number of bodies</para>
-</listitem><listitem><para>COM (x, y, z)</para>
-</listitem><listitem><para>COV (x, y, z)</para>
-</listitem><listitem><para>Ang mom (x, y, z)</para>
-</listitem><listitem><para>Total KE</para>
-</listitem><listitem><para>Total PE</para>
-</listitem><listitem><para>Total E</para>
-</listitem><listitem><para>Virial of Clausius (VC)</para>
-</listitem><listitem><para>2T/VC</para>
-</listitem><listitem><para><ref refid="class_time" kindref="compound">Time</ref> per step</para>
-</listitem><listitem><para>Total particles used</para>
-</listitem></orderedlist>
-</para>
-<para>For each component in succession<orderedlist>
-<listitem><para>Total mass</para>
-</listitem></orderedlist>
-</para>
-<para>Number of bodies<orderedlist>
-<listitem><para>COM (x, y, z)</para>
-</listitem><listitem><para>COV (x, y, z)</para>
-</listitem><listitem><para>Ang mom (x, y, z)</para>
-</listitem><listitem><para>Total KE</para>
-</listitem><listitem><para>Total PE</para>
-</listitem><listitem><para>Total E</para>
-</listitem><listitem><para>Virial of Clausius (VC)</para>
-</listitem><listitem><para>2T/VC</para>
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diff --git a/doxyxml/class_out_multi.xml b/doxyxml/class_out_multi.xml
deleted file mode 100644
index ab2ee71..0000000
--- a/doxyxml/class_out_multi.xml
+++ /dev/null
@@ -1,226 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_multi" kind="class" language="C++" prot="public">
-    <compoundname>OutMulti</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_multi_8_h" local="no">OutMulti.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_multi_1a27fdb1a3a3d5a7719d1280c3310e43e7" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutMulti::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutMulti::filename</qualifiedname>
-        <briefdescription>
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-        <qualifiedname>OutMulti::prev</qualifiedname>
-        <initializer>= -std::numeric_limits&lt;double&gt;::max()</initializer>
-        <briefdescription>
-        </briefdescription>
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-        <argsstring></argsstring>
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-        <qualifiedname>OutMulti::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
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-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutMulti</scope><name>stopWatch</name></member>
-      <member refid="class_output_1a69f42df0c1eab6a81fb2346e59c66943" prot="protected" virt="non-virtual"><scope>OutMulti</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutMulti</scope><name>unmatched</name></member>
-      <member refid="class_out_multi_1a39525b617da2a9af1e6844b5cdef9ef0" prot="private" virt="non-virtual"><scope>OutMulti</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutMulti</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_p_s.xml b/doxyxml/class_out_p_s.xml
deleted file mode 100644
index 7219f1c..0000000
--- a/doxyxml/class_out_p_s.xml
+++ /dev/null
@@ -1,241 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_p_s" kind="class" language="C++" prot="public">
-    <compoundname>OutPS</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_p_s_8_h" local="no">OutPS.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_p_s_1a7d8fe8f732041e8bec61deaa6b397464" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutPS::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutPS::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPS.H" line="22" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutPS.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_1ab3db5727f1b07bc3cfea2b028ea75b2e" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPS::timer</definition>
-        <argsstring></argsstring>
-        <name>timer</name>
-        <qualifiedname>OutPS::timer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPS.H" line="23" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutPS.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_p_s_1aeb835ec3204124b4a4df62d1c1d76124" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutPS::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutPS::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPS.H" line="28" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutPS.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
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-    <sectiondef kind="private-func">
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-        <type>void</type>
-        <definition>void OutPS::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutPS::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPS.H" line="25" column="8"/>
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-        <type></type>
-        <definition>OutPS::OutPS</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutPS</name>
-        <qualifiedname>OutPS::OutPS</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPS.H" line="33" column="3"/>
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-        <type>void</type>
-        <definition>void OutPS::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutPS::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Provided by derived class to generate some output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current multistep level to decide whether or not to dump multisteps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>timer</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true turns on wall-clock timer for PS output </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPS.H" line="44" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Append phase space dumps to specified file at regular intervals</para>
-<para>Sending the root process a SIGHUP will cause the first of <ref refid="class_out_p_s" kindref="compound">OutPS</ref>, <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref>, <ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref>, <ref refid="class_out_p_s_q" kindref="compound">OutPSQ</ref>, <ref refid="class_out_c_h_k_p_t" kindref="compound">OutCHKPT</ref>, or <ref refid="class_out_c_h_k_p_t_q" kindref="compound">OutCHKPTQ</ref> in the <ref refid="class_output" kindref="compound">Output</ref> list to execute. This may not always be possible to signal for batch scheduled jobs.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the output file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between dumps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>timer</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true turns on wall-clock timer for PS output </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutPS</label>
-        <link refid="class_out_p_s"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutPS</label>
-        <link refid="class_out_p_s"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutPS.H" line="17" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutPS.H" bodystart="18" bodyend="46"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutPS</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutPS</scope><name>current_keys</name></member>
-      <member refid="class_out_p_s_1a7d8fe8f732041e8bec61deaa6b397464" prot="private" virt="non-virtual"><scope>OutPS</scope><name>filename</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutPS</scope><name>id</name></member>
-      <member refid="class_out_p_s_1a6acd8c3b9cdb80d8ebaeff8b6d9da461" prot="private" virt="virtual"><scope>OutPS</scope><name>initialize</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutPS</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutPS</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutPS</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_p_s_1a36be7b20a035fe923e40f74a3beb29c9" prot="public" virt="non-virtual"><scope>OutPS</scope><name>OutPS</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutPS</scope><name>Output</name></member>
-      <member refid="class_out_p_s_1aa6917ffb83e7bfc1c8c277ab6e29349c" prot="public" virt="virtual"><scope>OutPS</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutPS</scope><name>stopWatch</name></member>
-      <member refid="class_out_p_s_1ab3db5727f1b07bc3cfea2b028ea75b2e" prot="private" virt="non-virtual"><scope>OutPS</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutPS</scope><name>unmatched</name></member>
-      <member refid="class_out_p_s_1aeb835ec3204124b4a4df62d1c1d76124" prot="private" virt="non-virtual"><scope>OutPS</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutPS</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_p_s_n.xml b/doxyxml/class_out_p_s_n.xml
deleted file mode 100644
index 1f487ad..0000000
--- a/doxyxml/class_out_p_s_n.xml
+++ /dev/null
@@ -1,287 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_p_s_n" kind="class" language="C++" prot="public">
-    <compoundname>OutPSN</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_p_s_n_8_h" local="no">OutPSN.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_p_s_n_1a5aa5b6a5b356649a3b64ddb295cfc322" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutPSN::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutPSN::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="27" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutPSN.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_n_1ae7f2203158c4a09597b8a22fb022e56b" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutPSN::nbeg</definition>
-        <argsstring></argsstring>
-        <name>nbeg</name>
-        <qualifiedname>OutPSN::nbeg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="29" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutPSN.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_n_1a675bbfe9c834a5d53ee772ab47845a3f" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPSN::real4</definition>
-        <argsstring></argsstring>
-        <name>real4</name>
-        <qualifiedname>OutPSN::real4</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="28" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutPSN.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_n_1ac3f7befd57580e293744f98fe00242d8" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPSN::timer</definition>
-        <argsstring></argsstring>
-        <name>timer</name>
-        <qualifiedname>OutPSN::timer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="28" column="14" bodyfile="/home/weinberg/Projects/EXP/src/OutPSN.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_p_s_n_1a2deabe61a8217c95d25950933970ea2c" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutPSN::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutPSN::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="33" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutPSN.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
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-        <type>void</type>
-        <definition>void OutPSN::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutPSN::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
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-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="30" column="8"/>
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-        <type></type>
-        <definition>OutPSN::OutPSN</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutPSN</name>
-        <qualifiedname>OutPSN::OutPSN</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
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-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="38" column="3"/>
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-        <type>void</type>
-        <definition>void OutPSN::Run</definition>
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-        <name>Run</name>
-        <qualifiedname>OutPSN::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
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-        <param>
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-<para>Provided by derived class to generate some output. </para>
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-<parametername>nstep</parametername>
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-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
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-<parametername>mstep</parametername>
-</parameternamelist>
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-<para>is the current multistep level to decide whether or not to dump multisteps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
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-<para>set to true turns on wall-clock timer for PS output </para>
-</parameterdescription>
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-        <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="49" column="8"/>
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-    <detaileddescription>
-<para>Write phase-space dumps at regular intervals. Each dump is written into a new file label as <computeroutput>filename.n</computeroutput> where is begins at <computeroutput>nbeg</computeroutput> and incremented by 1 after each file is written.</para>
-<para>Sending the root process a SIGHUP will cause the first of <ref refid="class_out_p_s" kindref="compound">OutPS</ref>, <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref>, <ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref>, <ref refid="class_out_p_s_q" kindref="compound">OutPSQ</ref>, <ref refid="class_out_c_h_k_p_t" kindref="compound">OutCHKPT</ref>, or <ref refid="class_out_c_h_k_p_t_q" kindref="compound">OutCHKPTQ</ref> in the <ref refid="class_output" kindref="compound">Output</ref> list to execute. This may not always be possible to signal for batch scheduled jobs.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the output file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between dumps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nbeg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is suffix of the first phase space dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>real4</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>indicates floats for real PS quantities </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>timer</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true turns on wall-clock timer for PS output </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutPSN</label>
-        <link refid="class_out_p_s_n"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutPSN</label>
-        <link refid="class_out_p_s_n"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutPSN.H" line="22" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutPSN.H" bodystart="23" bodyend="51"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutPSN</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutPSN</scope><name>current_keys</name></member>
-      <member refid="class_out_p_s_n_1a5aa5b6a5b356649a3b64ddb295cfc322" prot="private" virt="non-virtual"><scope>OutPSN</scope><name>filename</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutPSN</scope><name>id</name></member>
-      <member refid="class_out_p_s_n_1a371c6c37e27cc35e0a4e8c18c68ac9e5" prot="private" virt="virtual"><scope>OutPSN</scope><name>initialize</name></member>
-      <member refid="class_out_p_s_n_1ae7f2203158c4a09597b8a22fb022e56b" prot="private" virt="non-virtual"><scope>OutPSN</scope><name>nbeg</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutPSN</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutPSN</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutPSN</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_p_s_n_1a745866ab75975af0f96cf959c0c14d23" prot="public" virt="non-virtual"><scope>OutPSN</scope><name>OutPSN</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutPSN</scope><name>Output</name></member>
-      <member refid="class_out_p_s_n_1a675bbfe9c834a5d53ee772ab47845a3f" prot="private" virt="non-virtual"><scope>OutPSN</scope><name>real4</name></member>
-      <member refid="class_out_p_s_n_1a75891567b0a9a47dfbb167e706519a3b" prot="public" virt="virtual"><scope>OutPSN</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutPSN</scope><name>stopWatch</name></member>
-      <member refid="class_out_p_s_n_1ac3f7befd57580e293744f98fe00242d8" prot="private" virt="non-virtual"><scope>OutPSN</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutPSN</scope><name>unmatched</name></member>
-      <member refid="class_out_p_s_n_1a2deabe61a8217c95d25950933970ea2c" prot="private" virt="non-virtual"><scope>OutPSN</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutPSN</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_p_s_p.xml b/doxyxml/class_out_p_s_p.xml
deleted file mode 100644
index f2815de..0000000
--- a/doxyxml/class_out_p_s_p.xml
+++ /dev/null
@@ -1,295 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_p_s_p" kind="class" language="C++" prot="public">
-    <compoundname>OutPSP</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_p_s_p_8_h" local="no">OutPSP.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_p_s_p_1ae732876ec8c372422f1a9a865b9bf7f5" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutPSP::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutPSP::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="36" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutPSP.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_p_1a7623f50b5dce1695c15d13b97080715f" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutPSP::nagg</definition>
-        <argsstring></argsstring>
-        <name>nagg</name>
-        <qualifiedname>OutPSP::nagg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="36" column="24" bodyfile="/home/weinberg/Projects/EXP/src/OutPSP.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_p_1ab630faa53634e487a7554a10f9dd5065" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutPSP::nbeg</definition>
-        <argsstring></argsstring>
-        <name>nbeg</name>
-        <qualifiedname>OutPSP::nbeg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="38" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutPSP.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_p_1af599b8cdbc1e2e0d5514a2538ac8c7c6" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPSP::real4</definition>
-        <argsstring></argsstring>
-        <name>real4</name>
-        <qualifiedname>OutPSP::real4</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="37" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutPSP.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_p_1ad5a859f3f5833888e55784a0216dafb5" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPSP::timer</definition>
-        <argsstring></argsstring>
-        <name>timer</name>
-        <qualifiedname>OutPSP::timer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="37" column="14" bodyfile="/home/weinberg/Projects/EXP/src/OutPSP.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_p_s_p_1aa7ff49a20ebc792784aa69537fa1513a" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutPSP::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutPSP::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="43" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutPSP.H" bodystart="43" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_out_p_s_p_1a2a76759c8f60f7c4ba2e0711a9dab111" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutPSP::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutPSP::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="40" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_out_p_s_p_1a8931c6703abd5de24af8bbb6be3e30e9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutPSP::OutPSP</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutPSP</name>
-        <qualifiedname>OutPSP::OutPSP</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="48" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_p_s_p_1a5cef52ca7dd67f85120d8c8b6fc24836" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutPSP::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutPSP::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Provided by derived class to generate some output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current multistep level to decide whether or not to dump multisteps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="58" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Write phase-space dumps at regular intervals using MPI-IO</para>
-<para>Each dump is written into a new file label as <computeroutput>filename.n</computeroutput> where is begins at <computeroutput>nbeg</computeroutput> and incremented by 1 after each file is written. This implementation bunches particles into memory and uses a collective MPI_File write to push the bunch to disk at the appropriate offset. The MPI-IO implementation does not maintain the particle sequence so indexing=1 needs to be added as a <ref refid="class_component" kindref="compound">Component</ref> option if the particle index is needed for post processing. This version is much faster than <ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref> and <ref refid="class_out_c_h_k_p_t" kindref="compound">OutCHKPT</ref> which uses MPI gather to the root node before writing. This is the newest version for <ref refid="class_p_s_p" kindref="compound">PSP</ref> output and has not be extensively tested as of 10/2018.</para>
-<para>Sending the root process a SIGHUP will cause the first of <ref refid="class_out_p_s" kindref="compound">OutPS</ref>, <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref>, <ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref>, <ref refid="class_out_p_s_q" kindref="compound">OutPSQ</ref>, <ref refid="class_out_c_h_k_p_t" kindref="compound">OutCHKPT</ref>, or <ref refid="class_out_c_h_k_p_t_q" kindref="compound">OutCHKPTQ</ref> in the output list to execute. This may not always be possible to signal for batch scheduled jobs.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the output file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between dumps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nbeg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is suffix of the first phase space dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>real4</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>indicates floats for real PS quantities </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nagg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of MPI-IO aggregators </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutPSP</label>
-        <link refid="class_out_p_s_p"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutPSP</label>
-        <link refid="class_out_p_s_p"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutPSP.H" line="31" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutPSP.H" bodystart="32" bodyend="60"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutPSP</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutPSP</scope><name>current_keys</name></member>
-      <member refid="class_out_p_s_p_1ae732876ec8c372422f1a9a865b9bf7f5" prot="private" virt="non-virtual"><scope>OutPSP</scope><name>filename</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutPSP</scope><name>id</name></member>
-      <member refid="class_out_p_s_p_1a2a76759c8f60f7c4ba2e0711a9dab111" prot="private" virt="virtual"><scope>OutPSP</scope><name>initialize</name></member>
-      <member refid="class_out_p_s_p_1a7623f50b5dce1695c15d13b97080715f" prot="private" virt="non-virtual"><scope>OutPSP</scope><name>nagg</name></member>
-      <member refid="class_out_p_s_p_1ab630faa53634e487a7554a10f9dd5065" prot="private" virt="non-virtual"><scope>OutPSP</scope><name>nbeg</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutPSP</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutPSP</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutPSP</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_p_s_p_1a8931c6703abd5de24af8bbb6be3e30e9" prot="public" virt="non-virtual"><scope>OutPSP</scope><name>OutPSP</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutPSP</scope><name>Output</name></member>
-      <member refid="class_out_p_s_p_1af599b8cdbc1e2e0d5514a2538ac8c7c6" prot="private" virt="non-virtual"><scope>OutPSP</scope><name>real4</name></member>
-      <member refid="class_out_p_s_p_1a5cef52ca7dd67f85120d8c8b6fc24836" prot="public" virt="virtual"><scope>OutPSP</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutPSP</scope><name>stopWatch</name></member>
-      <member refid="class_out_p_s_p_1ad5a859f3f5833888e55784a0216dafb5" prot="private" virt="non-virtual"><scope>OutPSP</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutPSP</scope><name>unmatched</name></member>
-      <member refid="class_out_p_s_p_1aa7ff49a20ebc792784aa69537fa1513a" prot="private" virt="non-virtual"><scope>OutPSP</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutPSP</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_p_s_q.xml b/doxyxml/class_out_p_s_q.xml
deleted file mode 100644
index 916cf00..0000000
--- a/doxyxml/class_out_p_s_q.xml
+++ /dev/null
@@ -1,312 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_p_s_q" kind="class" language="C++" prot="public">
-    <compoundname>OutPSQ</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_p_s_q_8_h" local="no">OutPSQ.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_p_s_q_1a67fc03fb5b8b46757e991ed23e54a3ab" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutPSQ::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutPSQ::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="33" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutPSQ.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_q_1a5d50def1746fbe854ae5d77586624d7f" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutPSQ::nbeg</definition>
-        <argsstring></argsstring>
-        <name>nbeg</name>
-        <qualifiedname>OutPSQ::nbeg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="35" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutPSQ.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_q_1afca7901f41925f6f03223090a94dcdb8" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPSQ::real4</definition>
-        <argsstring></argsstring>
-        <name>real4</name>
-        <qualifiedname>OutPSQ::real4</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="34" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutPSQ.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_q_1a2549e3bbf7b43978ca0934765b5e0312" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutPSQ::threads</definition>
-        <argsstring></argsstring>
-        <name>threads</name>
-        <qualifiedname>OutPSQ::threads</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="35" column="12" bodyfile="/home/weinberg/Projects/EXP/src/OutPSQ.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_q_1ac1cfdab83d95ea176115ebc3218c2cfc" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPSQ::timer</definition>
-        <argsstring></argsstring>
-        <name>timer</name>
-        <qualifiedname>OutPSQ::timer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="34" column="14" bodyfile="/home/weinberg/Projects/EXP/src/OutPSQ.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_p_s_q_1a57bb30edf61c4d0f56049cba7aa8f770" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutPSQ::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutPSQ::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="39" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutPSQ.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_out_p_s_q_1aef46e9c0c5bce341af30d3f5b10a7531" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutPSQ::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutPSQ::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="36" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_out_p_s_q_1ae78ce55d5f28021ad9ce14aa60766541" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutPSQ::OutPSQ</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutPSQ</name>
-        <qualifiedname>OutPSQ::OutPSQ</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="44" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_p_s_q_1a9cf2c3f636c5192b8656804dacea061c" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutPSQ::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutPSQ::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Provided by derived class to generate some output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current multistep level to decide whether or not to dump multisteps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>timer</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true turns on wall-clock timer for PS output </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>threads</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread count for binary writes </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="56" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Write phase-space dumps at regular intervals from each node in component pieces. These pieces may be reassembled from the info in an &quot;instruction&quot; file.</para>
-<para>The assembly instructions for each dump is written into a new file label as <computeroutput>filename.n</computeroutput> where is begins at <computeroutput>nbeg</computeroutput> and incremented by 1 after each file is written.</para>
-<para>The component pieces are indexed from 0 onward.</para>
-<para>Sending the root process a SIGHUP will cause the first of <ref refid="class_out_p_s" kindref="compound">OutPS</ref>, <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref>, <ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref>, <ref refid="class_out_p_s_q" kindref="compound">OutPSQ</ref>, <ref refid="class_out_c_h_k_p_t" kindref="compound">OutCHKPT</ref>, or <ref refid="class_out_c_h_k_p_t_q" kindref="compound">OutCHKPTQ</ref> in the <ref refid="class_output" kindref="compound">Output</ref> list to execute. This may not always be possible to signal for batch scheduled jobs.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the output file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between dumps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nbeg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is suffix of the first phase space dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>timer</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true turns on wall-clock timer for PS output </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>threads</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>number of threads for binary writes </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutPSQ</label>
-        <link refid="class_out_p_s_q"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutPSQ</label>
-        <link refid="class_out_p_s_q"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutPSQ.H" line="28" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutPSQ.H" bodystart="29" bodyend="58"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutPSQ</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutPSQ</scope><name>current_keys</name></member>
-      <member refid="class_out_p_s_q_1a67fc03fb5b8b46757e991ed23e54a3ab" prot="private" virt="non-virtual"><scope>OutPSQ</scope><name>filename</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutPSQ</scope><name>id</name></member>
-      <member refid="class_out_p_s_q_1aef46e9c0c5bce341af30d3f5b10a7531" prot="private" virt="virtual"><scope>OutPSQ</scope><name>initialize</name></member>
-      <member refid="class_out_p_s_q_1a5d50def1746fbe854ae5d77586624d7f" prot="private" virt="non-virtual"><scope>OutPSQ</scope><name>nbeg</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutPSQ</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutPSQ</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutPSQ</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_p_s_q_1ae78ce55d5f28021ad9ce14aa60766541" prot="public" virt="non-virtual"><scope>OutPSQ</scope><name>OutPSQ</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutPSQ</scope><name>Output</name></member>
-      <member refid="class_out_p_s_q_1afca7901f41925f6f03223090a94dcdb8" prot="private" virt="non-virtual"><scope>OutPSQ</scope><name>real4</name></member>
-      <member refid="class_out_p_s_q_1a9cf2c3f636c5192b8656804dacea061c" prot="public" virt="virtual"><scope>OutPSQ</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutPSQ</scope><name>stopWatch</name></member>
-      <member refid="class_out_p_s_q_1a2549e3bbf7b43978ca0934765b5e0312" prot="private" virt="non-virtual"><scope>OutPSQ</scope><name>threads</name></member>
-      <member refid="class_out_p_s_q_1ac1cfdab83d95ea176115ebc3218c2cfc" prot="private" virt="non-virtual"><scope>OutPSQ</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutPSQ</scope><name>unmatched</name></member>
-      <member refid="class_out_p_s_q_1a57bb30edf61c4d0f56049cba7aa8f770" prot="private" virt="non-virtual"><scope>OutPSQ</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutPSQ</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_p_s_r.xml b/doxyxml/class_out_p_s_r.xml
deleted file mode 100644
index e0c8c6f..0000000
--- a/doxyxml/class_out_p_s_r.xml
+++ /dev/null
@@ -1,345 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_p_s_r" kind="class" language="C++" prot="public">
-    <compoundname>OutPSR</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_p_s_r_8_h" local="no">OutPSR.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_p_s_r_1a8d0fda446920795eef123ca15442b4a8" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutPSR::filename</definition>
-        <argsstring></argsstring>
-        <name>filename</name>
-        <qualifiedname>OutPSR::filename</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="33" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutPSR.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_r_1ae2919ff29fbaabce3324ff6cda494876" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutPSR::fname</definition>
-        <argsstring></argsstring>
-        <name>fname</name>
-        <qualifiedname>OutPSR::fname</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="33" column="24" bodyfile="/home/weinberg/Projects/EXP/src/OutPSR.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_r_1a9770d317d3376a1e8ddfed7dd676e3ef" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutPSR::nbeg</definition>
-        <argsstring></argsstring>
-        <name>nbeg</name>
-        <qualifiedname>OutPSR::nbeg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="35" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutPSR.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_r_1a64c79e416f0843ce91b935472619c755" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPSR::real4</definition>
-        <argsstring></argsstring>
-        <name>real4</name>
-        <qualifiedname>OutPSR::real4</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="34" column="8" bodyfile="/home/weinberg/Projects/EXP/src/OutPSR.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_r_1a6243e1b1ce9626354765a6f5519ce47f" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutPSR::threads</definition>
-        <argsstring></argsstring>
-        <name>threads</name>
-        <qualifiedname>OutPSR::threads</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="35" column="12" bodyfile="/home/weinberg/Projects/EXP/src/OutPSR.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_p_s_r_1aaed3851a36fbe6d8848d4f435be83554" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool OutPSR::timer</definition>
-        <argsstring></argsstring>
-        <name>timer</name>
-        <qualifiedname>OutPSR::timer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="34" column="14" bodyfile="/home/weinberg/Projects/EXP/src/OutPSR.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_p_s_r_1a5858e6d59ca7d3dd86588327c62722cf" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutPSR::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutPSR::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="41" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutPSR.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
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-      <memberdef kind="function" id="class_out_p_s_r_1a224f4e600747fe0ec5cf5a071eced1e2" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutPSR::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutPSR::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="36" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_p_s_r_1a4a4bd7ef7d520e0b5d447ee168dff8db" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OutPSR::write_thread</definition>
-        <argsstring>(void)</argsstring>
-        <name>write_thread</name>
-        <qualifiedname>OutPSR::write_thread</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="38" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_out_p_s_r_1a9535bed57f233ebfc95b2f9e246fe5b7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutPSR::OutPSR</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutPSR</name>
-        <qualifiedname>OutPSR::OutPSR</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="46" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_p_s_r_1ab363555ce7d23596b9f6bee005b1c68b" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutPSR::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutPSR::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Provided by derived class to generate some output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current multistep level to decide whether or not to dump multisteps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>timer</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true turns on wall-clock timer for PS output </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>threads</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread count for binary writes </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="58" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Write phase-space dumps at regular intervals from each node in component pieces. These pieces may be reassembled from the info in an &quot;instruction&quot; file.</para>
-<para>The assembly instructions for each dump is written into a new file label as <computeroutput>filename.n</computeroutput> where is begins at <computeroutput>nbeg</computeroutput> and incremented by 1 after each file is written.</para>
-<para>The component pieces are indexed from 0 onward.</para>
-<para>Sending the root process a SIGHUP will cause the first of <ref refid="class_out_p_s" kindref="compound">OutPS</ref>, <ref refid="class_out_p_s_p" kindref="compound">OutPSP</ref>, <ref refid="class_out_p_s_n" kindref="compound">OutPSN</ref>, <ref refid="class_out_p_s_r" kindref="compound">OutPSR</ref>, <ref refid="class_out_c_h_k_p_t" kindref="compound">OutCHKPT</ref>, or <ref refid="class_out_c_h_k_p_t_q" kindref="compound">OutCHKPTQ</ref> in the <ref refid="class_output" kindref="compound">Output</ref> list to execute. This may not always be possible to signal for batch scheduled jobs.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>filename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the output file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of steps between dumps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nbeg</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is suffix of the first phase space dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>timer</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true turns on wall-clock timer for PS output </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>threads</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>number of threads for binary writes </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutPSR</label>
-        <link refid="class_out_p_s_r"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutPSR</label>
-        <link refid="class_out_p_s_r"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutPSR.H" line="28" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutPSR.H" bodystart="29" bodyend="60"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutPSR</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutPSR</scope><name>current_keys</name></member>
-      <member refid="class_out_p_s_r_1a8d0fda446920795eef123ca15442b4a8" prot="private" virt="non-virtual"><scope>OutPSR</scope><name>filename</name></member>
-      <member refid="class_out_p_s_r_1ae2919ff29fbaabce3324ff6cda494876" prot="private" virt="non-virtual"><scope>OutPSR</scope><name>fname</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutPSR</scope><name>id</name></member>
-      <member refid="class_out_p_s_r_1a224f4e600747fe0ec5cf5a071eced1e2" prot="private" virt="virtual"><scope>OutPSR</scope><name>initialize</name></member>
-      <member refid="class_out_p_s_r_1a9770d317d3376a1e8ddfed7dd676e3ef" prot="private" virt="non-virtual"><scope>OutPSR</scope><name>nbeg</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutPSR</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutPSR</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutPSR</scope><name>nintsub_warning</name></member>
-      <member refid="class_out_p_s_r_1a9535bed57f233ebfc95b2f9e246fe5b7" prot="public" virt="non-virtual"><scope>OutPSR</scope><name>OutPSR</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutPSR</scope><name>Output</name></member>
-      <member refid="class_out_p_s_r_1a64c79e416f0843ce91b935472619c755" prot="private" virt="non-virtual"><scope>OutPSR</scope><name>real4</name></member>
-      <member refid="class_out_p_s_r_1ab363555ce7d23596b9f6bee005b1c68b" prot="public" virt="virtual"><scope>OutPSR</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutPSR</scope><name>stopWatch</name></member>
-      <member refid="class_out_p_s_r_1a6243e1b1ce9626354765a6f5519ce47f" prot="private" virt="non-virtual"><scope>OutPSR</scope><name>threads</name></member>
-      <member refid="class_out_p_s_r_1aaed3851a36fbe6d8848d4f435be83554" prot="private" virt="non-virtual"><scope>OutPSR</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutPSR</scope><name>unmatched</name></member>
-      <member refid="class_out_p_s_r_1a5858e6d59ca7d3dd86588327c62722cf" prot="private" virt="non-virtual"><scope>OutPSR</scope><name>valid_keys</name></member>
-      <member refid="class_out_p_s_r_1a4a4bd7ef7d520e0b5d447ee168dff8db" prot="private" virt="non-virtual"><scope>OutPSR</scope><name>write_thread</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutPSR</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_relaxation.xml b/doxyxml/class_out_relaxation.xml
deleted file mode 100644
index 9b9a253..0000000
--- a/doxyxml/class_out_relaxation.xml
+++ /dev/null
@@ -1,239 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_relaxation" kind="class" language="C++" prot="public">
-    <compoundname>OutRelaxation</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_relaxation_8_h" local="no">OutRelaxation.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_relaxation_1a0b2cef341d31b3a60f7e746ec03f14b5" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutRelaxation::epos</definition>
-        <argsstring></argsstring>
-        <name>epos</name>
-        <qualifiedname>OutRelaxation::epos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="15" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutRelaxation.H" bodystart="15" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_relaxation_1a3e0c51a49d6632b50c0e54705dca761e" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutRelaxation::fname</definition>
-        <argsstring></argsstring>
-        <name>fname</name>
-        <qualifiedname>OutRelaxation::fname</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="12" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutRelaxation.H" bodystart="12" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_relaxation_1a0adb59b9480ce8d5790ecccf3fce050a" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutRelaxation::suffix</definition>
-        <argsstring></argsstring>
-        <name>suffix</name>
-        <qualifiedname>OutRelaxation::suffix</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="13" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutRelaxation.H" bodystart="13" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_relaxation_1ae2feea59e4d1d8e75b95c472fec0372e" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutRelaxation::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutRelaxation::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="19" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutRelaxation.H" bodystart="19" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_out_relaxation_1acd831c59ba6c94d1d5486744175c0750" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutRelaxation::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutRelaxation::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="16" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_out_relaxation_1a1f6d236b318714644e317c2e5311d8c3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutRelaxation::OutRelaxation</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutRelaxation</name>
-        <qualifiedname>OutRelaxation::OutRelaxation</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="24" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_relaxation_1a6935d179bc0a47bab5a1ce846e0fffe3" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutRelaxation::Run</definition>
-        <argsstring>(int nstep, int mstep, bool final=false)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutRelaxation::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>final</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Do some output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step index </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current multistep level to decide whether or not to dump multisteps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>final</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on last step to force output </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="34" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_relaxation_1aa797819651d1974e3f3827d211d9af03" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual OutRelaxation::~OutRelaxation</definition>
-        <argsstring>()</argsstring>
-        <name>~OutRelaxation</name>
-        <qualifiedname>OutRelaxation::~OutRelaxation</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="26" column="11" bodyfile="/home/weinberg/Projects/EXP/src/OutRelaxation.H" bodystart="26" bodyend="26"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para><ref refid="class_output" kindref="compound">Output</ref> routine for <ref refid="classgenerate_relaxation" kindref="compound">generateRelaxation</ref> (&quot;external force&quot;) module. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutRelaxation</label>
-        <link refid="class_out_relaxation"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>OutRelaxation</label>
-        <link refid="class_out_relaxation"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/OutRelaxation.H" line="7" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutRelaxation.H" bodystart="8" bodyend="36"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>OutRelaxation</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>OutRelaxation</scope><name>current_keys</name></member>
-      <member refid="class_out_relaxation_1a0b2cef341d31b3a60f7e746ec03f14b5" prot="private" virt="non-virtual"><scope>OutRelaxation</scope><name>epos</name></member>
-      <member refid="class_out_relaxation_1a3e0c51a49d6632b50c0e54705dca761e" prot="private" virt="non-virtual"><scope>OutRelaxation</scope><name>fname</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutRelaxation</scope><name>id</name></member>
-      <member refid="class_out_relaxation_1acd831c59ba6c94d1d5486744175c0750" prot="private" virt="virtual"><scope>OutRelaxation</scope><name>initialize</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutRelaxation</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>OutRelaxation</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>OutRelaxation</scope><name>nintsub_warning</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>OutRelaxation</scope><name>Output</name></member>
-      <member refid="class_out_relaxation_1a1f6d236b318714644e317c2e5311d8c3" prot="public" virt="non-virtual"><scope>OutRelaxation</scope><name>OutRelaxation</name></member>
-      <member refid="class_out_relaxation_1a6935d179bc0a47bab5a1ce846e0fffe3" prot="public" virt="virtual"><scope>OutRelaxation</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>OutRelaxation</scope><name>stopWatch</name></member>
-      <member refid="class_out_relaxation_1a0adb59b9480ce8d5790ecccf3fce050a" prot="private" virt="non-virtual"><scope>OutRelaxation</scope><name>suffix</name></member>
-      <member refid="class_output_1a69f42df0c1eab6a81fb2346e59c66943" prot="protected" virt="non-virtual"><scope>OutRelaxation</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>OutRelaxation</scope><name>unmatched</name></member>
-      <member refid="class_out_relaxation_1ae2feea59e4d1d8e75b95c472fec0372e" prot="private" virt="non-virtual"><scope>OutRelaxation</scope><name>valid_keys</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutRelaxation</scope><name>~Output</name></member>
-      <member refid="class_out_relaxation_1aa797819651d1974e3f3827d211d9af03" prot="public" virt="virtual"><scope>OutRelaxation</scope><name>~OutRelaxation</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_out_vel.xml b/doxyxml/class_out_vel.xml
deleted file mode 100644
index 7a85ca7..0000000
--- a/doxyxml/class_out_vel.xml
+++ /dev/null
@@ -1,530 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_out_vel" kind="class" language="C++" prot="public">
-    <compoundname>OutVel</compoundname>
-    <basecompoundref refid="class_output" prot="public" virt="non-virtual">Output</basecompoundref>
-    <includes refid="_out_vel_8_h" local="no">OutVel.H</includes>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_out_vel_1ae43dcf71f524550291466c4ce6578a62" prot="private" static="no">
-        <type>Eigen::TensorMap&lt; Eigen::Tensor&lt; std::complex&lt; double &gt;, 3 &gt; &gt;</type>
-        <definition>using OutVel::CoefType =  Eigen::TensorMap&lt;Eigen::Tensor&lt;std::complex&lt;double&gt;, 3&gt; &gt;</definition>
-        <argsstring></argsstring>
-        <name>CoefType</name>
-        <qualifiedname>OutVel::CoefType</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="64" column="3" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="64" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_out_vel_1ab871ca1a7674972c3e211b7713c49307" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; BasisClasses::VelocityBasis &gt;</type>
-        <definition>std::shared_ptr&lt;BasisClasses::VelocityBasis&gt; OutVel::basis</definition>
-        <argsstring></argsstring>
-        <name>basis</name>
-        <qualifiedname>OutVel::basis</qualifiedname>
-        <briefdescription>
-<para>The basis isntance. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="67" column="19" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="67" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_vel_1a124f41a34aaf1457e3235f4d4a0cc544" prot="private" static="no" mutable="no">
-        <type>CoefClasses::CoefsPtr</type>
-        <definition>CoefClasses::CoefsPtr OutVel::coefs</definition>
-        <argsstring></argsstring>
-        <name>coefs</name>
-        <qualifiedname>OutVel::coefs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="56" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="56" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_vel_1a3a482e29d1dbbbf3706b353f2c834934" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int OutVel::dof</definition>
-        <argsstring></argsstring>
-        <name>dof</name>
-        <qualifiedname>OutVel::dof</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="57" column="7" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="57" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_vel_1aeada5d27536d975b914fc80809939a45" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutVel::model</definition>
-        <argsstring></argsstring>
-        <name>model</name>
-        <qualifiedname>OutVel::model</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="53" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="53" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_vel_1aef724fab158ee450f195a3459f16dc78" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutVel::modelname</definition>
-        <argsstring></argsstring>
-        <name>modelname</name>
-        <qualifiedname>OutVel::modelname</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="53" column="15" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="53" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_vel_1af430cf7b2a415ac945fed5dd2a836656" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string OutVel::outfile</definition>
-        <argsstring></argsstring>
-        <name>outfile</name>
-        <qualifiedname>OutVel::outfile</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="53" column="31" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="53" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_vel_1a3da7062ac67c00d26e4c2d69e9b1d0c8" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutVel::prev</definition>
-        <argsstring></argsstring>
-        <name>prev</name>
-        <qualifiedname>OutVel::prev</qualifiedname>
-        <initializer>= -std::numeric_limits&lt;double&gt;::max()</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="54" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="54" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_out_vel_1a21462243702845749e75c3f8c670410b" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* OutVel::tcomp</definition>
-        <argsstring></argsstring>
-        <name>tcomp</name>
-        <qualifiedname>OutVel::tcomp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="55" column="13" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_out_vel_1a42ce49fc53807b1ad36a968141a054ee" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; OutVel::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>OutVel::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="62" column="25" bodyfile="/home/weinberg/Projects/EXP/src/OutVel.H" bodystart="62" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_out_vel_1ac82da276bb4043c665ee25d6c337037d" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OutVel::ExtendH5Coefs</definition>
-        <argsstring>()</argsstring>
-        <name>ExtendH5Coefs</name>
-        <qualifiedname>OutVel::ExtendH5Coefs</qualifiedname>
-        <briefdescription>
-<para>Extend the HDF5 file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="73" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_vel_1a6999a3df3535236f41afebac2089ccfe" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutVel::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutVel::initialize</qualifiedname>
-        <reimplements refid="class_output_1ade7a25abbb901a224247fbbfa068f157">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Used to assign additional specific parameters, create storage, etc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="59" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_vel_1a644ebb934caa878cf2477c7ecb41b62c" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OutVel::WriteH5Coefs</definition>
-        <argsstring>()</argsstring>
-        <name>WriteH5Coefs</name>
-        <qualifiedname>OutVel::WriteH5Coefs</qualifiedname>
-        <briefdescription>
-<para>Initialize and write the HDF5 file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="70" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_vel_1a10801901b4ee587dd2a7e054779d2d25" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OutVel::WriteH5Params</definition>
-        <argsstring>(HighFive::File &amp;file)</argsstring>
-        <name>WriteH5Params</name>
-        <qualifiedname>OutVel::WriteH5Params</qualifiedname>
-        <param>
-          <type>HighFive::File &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-<para>Write the parameters to the HDF5 file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="76" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_vel_1a56cd287b5d78b2572c318eea397e4d50" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>unsigned</type>
-        <definition>unsigned OutVel::WriteH5Times</definition>
-        <argsstring>(HighFive::Group &amp;snaps, unsigned count)</argsstring>
-        <name>WriteH5Times</name>
-        <qualifiedname>OutVel::WriteH5Times</qualifiedname>
-        <param>
-          <type>HighFive::Group &amp;</type>
-          <declname>snaps</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>count</declname>
-        </param>
-        <briefdescription>
-<para>Write the coefficient data to the HDF5 file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="79" column="12"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_out_vel_1aaeec0e81f8c8cbe52459a1922a8ea9f7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutVel::OutVel</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>OutVel</name>
-        <qualifiedname>OutVel::OutVel</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="84" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_out_vel_1ab9a2eaca77d493329dd0c59254ae6b21" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void OutVel::Run</definition>
-        <argsstring>(int nstep, int mstep, bool last)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutVel::Run</qualifiedname>
-        <reimplements refid="class_output_1af71ace8955ee2741677a7fbaf268ab82">Run</reimplements>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>last</declname>
-        </param>
-        <briefdescription>
-<para>Generate the output. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nstep</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the current time step used to decide whether or not to dump </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>last</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be true on final step to force phase space dump indepentently of whether or not the frequency criterion is met </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutVel.H" line="93" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Dump velocity flow coefficients at each interval</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>modelname</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the file specifying the density model</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>name</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>of the component to dump</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the frequency between file updates</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dof</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of degrees of freedom. 2=polar, 3 =spherical</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmapping</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the coordinate mapping parameter for the expansion</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum radius for the density field</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radius for the density field</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ascl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the exponential scale length used for the &quot;expon&quot; density</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>delta</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the cutoff radius used for the &quot;expon&quot; density</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>model</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>defines the density for the orthogonal functions </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>OutVel</label>
-        <link refid="class_out_vel"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="4">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="7">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="8" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>OutVel</label>
-        <link refid="class_out_vel"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>tcomp</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="6">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="5" relation="usage">
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-    <listofallmembers>
-      <member refid="class_out_vel_1ab871ca1a7674972c3e211b7713c49307" prot="private" virt="non-virtual"><scope>OutVel</scope><name>basis</name></member>
-      <member refid="class_out_vel_1a124f41a34aaf1457e3235f4d4a0cc544" prot="private" virt="non-virtual"><scope>OutVel</scope><name>coefs</name></member>
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-      <member refid="class_out_vel_1ac82da276bb4043c665ee25d6c337037d" prot="private" virt="non-virtual"><scope>OutVel</scope><name>ExtendH5Coefs</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>OutVel</scope><name>id</name></member>
-      <member refid="class_out_vel_1a6999a3df3535236f41afebac2089ccfe" prot="private" virt="virtual"><scope>OutVel</scope><name>initialize</name></member>
-      <member refid="class_out_vel_1aeada5d27536d975b914fc80809939a45" prot="private" virt="non-virtual"><scope>OutVel</scope><name>model</name></member>
-      <member refid="class_out_vel_1aef724fab158ee450f195a3459f16dc78" prot="private" virt="non-virtual"><scope>OutVel</scope><name>modelname</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>OutVel</scope><name>nint</name></member>
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-      <member refid="class_out_vel_1af430cf7b2a415ac945fed5dd2a836656" prot="private" virt="non-virtual"><scope>OutVel</scope><name>outfile</name></member>
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-      <member refid="class_out_vel_1aaeec0e81f8c8cbe52459a1922a8ea9f7" prot="public" virt="non-virtual"><scope>OutVel</scope><name>OutVel</name></member>
-      <member refid="class_out_vel_1a3da7062ac67c00d26e4c2d69e9b1d0c8" prot="private" virt="non-virtual"><scope>OutVel</scope><name>prev</name></member>
-      <member refid="class_out_vel_1ab9a2eaca77d493329dd0c59254ae6b21" prot="public" virt="virtual"><scope>OutVel</scope><name>Run</name></member>
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-      <member refid="class_out_vel_1a42ce49fc53807b1ad36a968141a054ee" prot="private" virt="non-virtual"><scope>OutVel</scope><name>valid_keys</name></member>
-      <member refid="class_out_vel_1a644ebb934caa878cf2477c7ecb41b62c" prot="private" virt="non-virtual"><scope>OutVel</scope><name>WriteH5Coefs</name></member>
-      <member refid="class_out_vel_1a10801901b4ee587dd2a7e054779d2d25" prot="private" virt="non-virtual"><scope>OutVel</scope><name>WriteH5Params</name></member>
-      <member refid="class_out_vel_1a56cd287b5d78b2572c318eea397e4d50" prot="private" virt="non-virtual"><scope>OutVel</scope><name>WriteH5Times</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>OutVel</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_output.xml b/doxyxml/class_output.xml
deleted file mode 100644
index ab56f76..0000000
--- a/doxyxml/class_output.xml
+++ /dev/null
@@ -1,432 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_output" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>Output</compoundname>
-    <derivedcompoundref refid="class_orb_trace" prot="public" virt="non-virtual">OrbTrace</derivedcompoundref>
-    <derivedcompoundref refid="class_out_ascii" prot="public" virt="non-virtual">OutAscii</derivedcompoundref>
-    <derivedcompoundref refid="class_out_c_h_k_p_t" prot="public" virt="non-virtual">OutCHKPT</derivedcompoundref>
-    <derivedcompoundref refid="class_out_c_h_k_p_t_q" prot="public" virt="non-virtual">OutCHKPTQ</derivedcompoundref>
-    <derivedcompoundref refid="class_out_calbr" prot="public" virt="non-virtual">OutCalbr</derivedcompoundref>
-    <derivedcompoundref refid="class_out_coef" prot="public" virt="non-virtual">OutCoef</derivedcompoundref>
-    <derivedcompoundref refid="class_out_diag" prot="public" virt="non-virtual">OutDiag</derivedcompoundref>
-    <derivedcompoundref refid="class_out_frac" prot="public" virt="non-virtual">OutFrac</derivedcompoundref>
-    <derivedcompoundref refid="class_out_log" prot="public" virt="non-virtual">OutLog</derivedcompoundref>
-    <derivedcompoundref refid="class_out_multi" prot="public" virt="non-virtual">OutMulti</derivedcompoundref>
-    <derivedcompoundref refid="class_out_p_s" prot="public" virt="non-virtual">OutPS</derivedcompoundref>
-    <derivedcompoundref refid="class_out_p_s_n" prot="public" virt="non-virtual">OutPSN</derivedcompoundref>
-    <derivedcompoundref refid="class_out_p_s_p" prot="public" virt="non-virtual">OutPSP</derivedcompoundref>
-    <derivedcompoundref refid="class_out_p_s_q" prot="public" virt="non-virtual">OutPSQ</derivedcompoundref>
-    <derivedcompoundref refid="class_out_p_s_r" prot="public" virt="non-virtual">OutPSR</derivedcompoundref>
-    <derivedcompoundref refid="class_out_relaxation" prot="public" virt="non-virtual">OutRelaxation</derivedcompoundref>
-    <derivedcompoundref refid="class_out_vel" prot="public" virt="non-virtual">OutVel</derivedcompoundref>
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-        <definition>const YAML::Node&amp; Output::conf</definition>
-        <argsstring></argsstring>
-        <name>conf</name>
-        <qualifiedname>Output::conf</qualifiedname>
-        <briefdescription>
-<para>Configuration. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <argsstring></argsstring>
-        <name>current_keys</name>
-        <qualifiedname>Output::current_keys</qualifiedname>
-        <briefdescription>
-<para>Current YAML keys to check configuration. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Output.H" line="66" column="12" bodyfile="/home/weinberg/Projects/EXP/src/Output.H" bodystart="66" bodyend="-1"/>
-        <referencedby refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" compoundref="_output_8_h" startline="83" endline="83">unmatched</referencedby>
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-        <name>nint</name>
-        <qualifiedname>Output::nint</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_output" kindref="compound">Output</ref> frequency (should be used by derived classes) </para>
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-        <briefdescription>
-<para>Multistep output frequency (also used by derived classes) </para>
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-        <name>stopWatch</name>
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-        <type></type>
-        <definition>virtual Output::~Output</definition>
-        <argsstring>()</argsstring>
-        <name>~Output</name>
-        <qualifiedname>Output::~Output</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Output.H" line="77" column="11" bodyfile="/home/weinberg/Projects/EXP/src/Output.H" bodystart="77" bodyend="77"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para><ref refid="class_output" kindref="compound">Output</ref> routines. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>These are designed to be run in a chain at each step. Each <ref refid="class_output" kindref="compound">Output</ref> class is responsible for determining when to run. Initialization parameters are parsed on construction and available to the contructor for initializing control variables.</para>
-<para>The class is also responsible for cycling through the component list and operating on each phase space accordingly. NB: the alternative would be to allow each component to define an output method. However, this can easily result in a chaos of specialized output streams and so I rejected this approach.</para>
-<para>The stopWatch <ref refid="class_timer" kindref="compound">Timer</ref> is implemented in the base class but can be used by any derived class to time the output event. See <ref refid="class_out_p_s" kindref="compound">OutPS</ref> for an example. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>OrbTrace</label>
-        <link refid="class_orb_trace"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>OutAscii</label>
-        <link refid="class_out_ascii"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>OutCHKPT</label>
-        <link refid="class_out_c_h_k_p_t"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>OutCHKPTQ</label>
-        <link refid="class_out_c_h_k_p_t_q"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>OutCalbr</label>
-        <link refid="class_out_calbr"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>OutCoef</label>
-        <link refid="class_out_coef"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>OutDiag</label>
-        <link refid="class_out_diag"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>OutFrac</label>
-        <link refid="class_out_frac"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>OutLog</label>
-        <link refid="class_out_log"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>OutMulti</label>
-        <link refid="class_out_multi"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>OutPS</label>
-        <link refid="class_out_p_s"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>OutPSN</label>
-        <link refid="class_out_p_s_n"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>OutPSP</label>
-        <link refid="class_out_p_s_p"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>OutPSQ</label>
-        <link refid="class_out_p_s_q"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="16">
-        <label>OutPSR</label>
-        <link refid="class_out_p_s_r"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="17">
-        <label>OutRelaxation</label>
-        <link refid="class_out_relaxation"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="18">
-        <label>OutVel</label>
-        <link refid="class_out_vel"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Output</label>
-        <link refid="class_output"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>Output</label>
-        <link refid="class_output"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>stopWatch</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/Output.H" line="28" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Output.H" bodystart="29" bodyend="84"/>
-    <listofallmembers>
-      <member refid="class_output_1a0f16f4c45c70bbeffaad744b45eacdf5" prot="protected" virt="non-virtual"><scope>Output</scope><name>conf</name></member>
-      <member refid="class_output_1aee441fea89e02b2858245ee28b9b025b" prot="protected" virt="non-virtual"><scope>Output</scope><name>current_keys</name></member>
-      <member refid="class_output_1a536938d67e94f7495a433f273db577cf" prot="public" virt="non-virtual"><scope>Output</scope><name>id</name></member>
-      <member refid="class_output_1ade7a25abbb901a224247fbbfa068f157" prot="protected" virt="pure-virtual"><scope>Output</scope><name>initialize</name></member>
-      <member refid="class_output_1a39eaed6fed933cc17bf987664aa7dabf" prot="protected" virt="non-virtual"><scope>Output</scope><name>nint</name></member>
-      <member refid="class_output_1a598ba954d78d8328eb821ed309ed3618" prot="protected" virt="non-virtual"><scope>Output</scope><name>nintsub</name></member>
-      <member refid="class_output_1a530b50b274e5edf4d8cc9588a94c3979" prot="protected" virt="non-virtual"><scope>Output</scope><name>nintsub_warning</name></member>
-      <member refid="class_output_1a12680d847644562a892fee224148729d" prot="public" virt="non-virtual"><scope>Output</scope><name>Output</name></member>
-      <member refid="class_output_1af71ace8955ee2741677a7fbaf268ab82" prot="public" virt="pure-virtual"><scope>Output</scope><name>Run</name></member>
-      <member refid="class_output_1a4bcd3bccc8d93387a70f94dea89f8a88" prot="protected" virt="non-virtual"><scope>Output</scope><name>stopWatch</name></member>
-      <member refid="class_output_1a69f42df0c1eab6a81fb2346e59c66943" prot="protected" virt="non-virtual"><scope>Output</scope><name>timer</name></member>
-      <member refid="class_output_1ad1c121a091c46c4c11ab76d90b1e39f9" prot="public" virt="non-virtual"><scope>Output</scope><name>unmatched</name></member>
-      <member refid="class_output_1a0162ebdc8e5b13917788692fa9a753a0" prot="public" virt="virtual"><scope>Output</scope><name>~Output</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_output_container.xml b/doxyxml/class_output_container.xml
deleted file mode 100644
index cae70b4..0000000
--- a/doxyxml/class_output_container.xml
+++ /dev/null
@@ -1,147 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_output_container" kind="class" language="C++" prot="public">
-    <compoundname>OutputContainer</compoundname>
-    <includes refid="_output_container_8_h" local="no">OutputContainer.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_output_container_1a6850768e2b7c57dd21fbf62df989ed20" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double OutputContainer::last</definition>
-        <argsstring></argsstring>
-        <name>last</name>
-        <qualifiedname>OutputContainer::last</qualifiedname>
-        <briefdescription>
-<para>Last run time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H" line="15" column="10" bodyfile="/home/weinberg/Projects/EXP/src/OutputContainer.H" bodystart="15" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_output_container_1ad26a7a1ba88d39be7ba86bd3a813ceaf" prot="public" static="no" mutable="no">
-        <type>std::list&lt; std::shared_ptr&lt; std::thread &gt; &gt;</type>
-        <definition>std::list&lt;std::shared_ptr&lt;std::thread&gt; &gt; OutputContainer::cproc</definition>
-        <argsstring></argsstring>
-        <name>cproc</name>
-        <qualifiedname>OutputContainer::cproc</qualifiedname>
-        <briefdescription>
-<para>A list of concurrent threads for asychronous processing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H" line="20" column="13" bodyfile="/home/weinberg/Projects/EXP/src/OutputContainer.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_output_container_1a741157a417b221c0ed447dcd02af8dd1" prot="public" static="no" mutable="no">
-        <type>std::list&lt; <ref refid="class_output" kindref="compound">Output</ref> * &gt;</type>
-        <definition>std::list&lt;Output*&gt; OutputContainer::out</definition>
-        <argsstring></argsstring>
-        <name>out</name>
-        <qualifiedname>OutputContainer::out</qualifiedname>
-        <briefdescription>
-<para>List of output methods currently active. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H" line="23" column="13" bodyfile="/home/weinberg/Projects/EXP/src/OutputContainer.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_output_container_1a380c6e441bd692d2719ebf24fd3d9f27" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OutputContainer::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>OutputContainer::initialize</qualifiedname>
-        <briefdescription>
-<para>Will read configuration stanza and initialize requested output methods. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H" line="32" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_output_container_1a59b4e0d99e98a1eff3ce1e3179d92f49" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutputContainer::OutputContainer</definition>
-        <argsstring>()</argsstring>
-        <name>OutputContainer</name>
-        <qualifiedname>OutputContainer::OutputContainer</qualifiedname>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H" line="26" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_output_container_1a6c567e5898c74769a18ca3bc41299525" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void OutputContainer::Run</definition>
-        <argsstring>(int nstep, int mstep=std::numeric_limits&lt; int &gt;::max(), bool final=false)</argsstring>
-        <name>Run</name>
-        <qualifiedname>OutputContainer::Run</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>nstep</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mstep</declname>
-          <defval>std::numeric_limits&lt; int &gt;::max()</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>final</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Execute the all methods in the container. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H" line="35" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_output_container_1a68138fe9f917c969925b0fe241bdfdc0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>OutputContainer::~OutputContainer</definition>
-        <argsstring>()</argsstring>
-        <name>~OutputContainer</name>
-        <qualifiedname>OutputContainer::~OutputContainer</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H" line="29" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Container class to hold the output chain of container methods. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/OutputContainer.H" line="10" column="1" bodyfile="/home/weinberg/Projects/EXP/src/OutputContainer.H" bodystart="11" bodyend="36"/>
-    <listofallmembers>
-      <member refid="class_output_container_1ad26a7a1ba88d39be7ba86bd3a813ceaf" prot="public" virt="non-virtual"><scope>OutputContainer</scope><name>cproc</name></member>
-      <member refid="class_output_container_1a380c6e441bd692d2719ebf24fd3d9f27" prot="public" virt="non-virtual"><scope>OutputContainer</scope><name>initialize</name></member>
-      <member refid="class_output_container_1a6850768e2b7c57dd21fbf62df989ed20" prot="private" virt="non-virtual"><scope>OutputContainer</scope><name>last</name></member>
-      <member refid="class_output_container_1a741157a417b221c0ed447dcd02af8dd1" prot="public" virt="non-virtual"><scope>OutputContainer</scope><name>out</name></member>
-      <member refid="class_output_container_1a59b4e0d99e98a1eff3ce1e3179d92f49" prot="public" virt="non-virtual"><scope>OutputContainer</scope><name>OutputContainer</name></member>
-      <member refid="class_output_container_1a6c567e5898c74769a18ca3bc41299525" prot="public" virt="non-virtual"><scope>OutputContainer</scope><name>Run</name></member>
-      <member refid="class_output_container_1a68138fe9f917c969925b0fe241bdfdc0" prot="public" virt="non-virtual"><scope>OutputContainer</scope><name>~OutputContainer</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_p2_quantile.xml b/doxyxml/class_p2_quantile.xml
deleted file mode 100644
index 89f373a..0000000
--- a/doxyxml/class_p2_quantile.xml
+++ /dev/null
@@ -1,285 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p2_quantile" kind="class" language="C++" prot="public">
-    <compoundname>P2Quantile</compoundname>
-    <includes refid="_p2_quantile_8_h" local="no">P2Quantile.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" prot="private" static="no" mutable="no">
-        <type>size_t</type>
-        <definition>size_t P2Quantile::count</definition>
-        <argsstring></argsstring>
-        <name>count</name>
-        <qualifiedname>P2Quantile::count</qualifiedname>
-        <briefdescription>
-<para>Update count so far. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="34" column="10" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="34" bodyend="-1"/>
-        <referencedby refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" compoundref="_p2_quantile_8_h" startline="62" endline="114">addValue</referencedby>
-        <referencedby refid="class_p2_quantile_1abd1b5648cbc1cc830c78409ff1e2e88b" compoundref="_p2_quantile_8_h" startline="117" endline="129">getQuantile</referencedby>
-        <referencedby refid="class_p2_quantile_1a15679a32893b62bdc05028065a29db83" compoundref="_p2_quantile_8_h" startline="55" endline="59">reset</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p2_quantile_1a5e7165f8caddccc724510ed0f5516df8" prot="private" static="no" mutable="no">
-        <type>std::array&lt; double, 5 &gt;</type>
-        <definition>std::array&lt;double, 5&gt; P2Quantile::dns</definition>
-        <argsstring></argsstring>
-        <name>dns</name>
-        <qualifiedname>P2Quantile::dns</qualifiedname>
-        <briefdescription>
-<para>Marker updates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="28" column="14" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="28" bodyend="-1"/>
-        <referencedby refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" compoundref="_p2_quantile_8_h" startline="62" endline="114">addValue</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" prot="private" static="no" mutable="no">
-        <type>std::array&lt; int, 5 &gt;</type>
-        <definition>std::array&lt;int, 5&gt; P2Quantile::n</definition>
-        <argsstring></argsstring>
-        <name>n</name>
-        <qualifiedname>P2Quantile::n</qualifiedname>
-        <briefdescription>
-<para>Marker indices. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="22" column="14" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" compoundref="_p2_quantile_8_h" startline="62" endline="114">addValue</referencedby>
-        <referencedby refid="class_p2_quantile_1a24ed888c01f041d1f7f694f785f2d5b9" compoundref="_p2_quantile_8_h" startline="44" endline="47">Linear</referencedby>
-        <referencedby refid="class_p2_quantile_1a50380e40ef6e47a3513f8e5a7afbc538" compoundref="_p2_quantile_8_h" startline="36" endline="42">Parabolic</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p2_quantile_1addc82cea12c1248999df5383b0059faa" prot="private" static="no" mutable="no">
-        <type>std::array&lt; double, 5 &gt;</type>
-        <definition>std::array&lt;double, 5&gt; P2Quantile::ns</definition>
-        <argsstring></argsstring>
-        <name>ns</name>
-        <qualifiedname>P2Quantile::ns</qualifiedname>
-        <briefdescription>
-<para>Desired marker positions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="25" column="14" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="25" bodyend="-1"/>
-        <referencedby refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" compoundref="_p2_quantile_8_h" startline="62" endline="114">addValue</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p2_quantile_1aaa2fd757d5da710da9ebb277973543b6" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double P2Quantile::p</definition>
-        <argsstring></argsstring>
-        <name>p</name>
-        <qualifiedname>P2Quantile::p</qualifiedname>
-        <briefdescription>
-<para>Probability. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="19" column="10" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="19" bodyend="-1"/>
-        <referencedby refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" compoundref="_p2_quantile_8_h" startline="62" endline="114">addValue</referencedby>
-        <referencedby refid="class_p2_quantile_1abd1b5648cbc1cc830c78409ff1e2e88b" compoundref="_p2_quantile_8_h" startline="117" endline="129">getQuantile</referencedby>
-        <referencedby refid="class_p2_quantile_1a15679a32893b62bdc05028065a29db83" compoundref="_p2_quantile_8_h" startline="55" endline="59">reset</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" prot="private" static="no" mutable="no">
-        <type>std::array&lt; double, 5 &gt;</type>
-        <definition>std::array&lt;double, 5&gt; P2Quantile::q</definition>
-        <argsstring></argsstring>
-        <name>q</name>
-        <qualifiedname>P2Quantile::q</qualifiedname>
-        <briefdescription>
-<para>Marker heights. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="31" column="14" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="31" bodyend="-1"/>
-        <referencedby refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" compoundref="_p2_quantile_8_h" startline="62" endline="114">addValue</referencedby>
-        <referencedby refid="class_p2_quantile_1abd1b5648cbc1cc830c78409ff1e2e88b" compoundref="_p2_quantile_8_h" startline="117" endline="129">getQuantile</referencedby>
-        <referencedby refid="class_p2_quantile_1a24ed888c01f041d1f7f694f785f2d5b9" compoundref="_p2_quantile_8_h" startline="44" endline="47">Linear</referencedby>
-        <referencedby refid="class_p2_quantile_1a50380e40ef6e47a3513f8e5a7afbc538" compoundref="_p2_quantile_8_h" startline="36" endline="42">Parabolic</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_p2_quantile_1a24ed888c01f041d1f7f694f785f2d5b9" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double P2Quantile::Linear</definition>
-        <argsstring>(int i, int d)</argsstring>
-        <name>Linear</name>
-        <qualifiedname>P2Quantile::Linear</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>d</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="44" column="10" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="44" bodyend="47"/>
-        <references refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" compoundref="_p2_quantile_8_h" startline="22">n</references>
-        <references refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" compoundref="_p2_quantile_8_h" startline="31">q</references>
-        <referencedby refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" compoundref="_p2_quantile_8_h" startline="62" endline="114">addValue</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_p2_quantile_1a50380e40ef6e47a3513f8e5a7afbc538" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double P2Quantile::Parabolic</definition>
-        <argsstring>(int i, double d)</argsstring>
-        <name>Parabolic</name>
-        <qualifiedname>P2Quantile::Parabolic</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>d</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="36" column="10" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="36" bodyend="42"/>
-        <references refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" compoundref="_p2_quantile_8_h" startline="22">n</references>
-        <references refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" compoundref="_p2_quantile_8_h" startline="31">q</references>
-        <referencedby refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" compoundref="_p2_quantile_8_h" startline="62" endline="114">addValue</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void P2Quantile::addValue</definition>
-        <argsstring>(double x)</argsstring>
-        <name>addValue</name>
-        <qualifiedname>P2Quantile::addValue</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Add a new value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="62" column="8" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="62" bodyend="114"/>
-        <references refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" compoundref="_p2_quantile_8_h" startline="34">count</references>
-        <references refid="class_p2_quantile_1a5e7165f8caddccc724510ed0f5516df8" compoundref="_p2_quantile_8_h" startline="28">dns</references>
-        <references refid="class_p2_quantile_1a24ed888c01f041d1f7f694f785f2d5b9" compoundref="_p2_quantile_8_h" startline="44" endline="47">Linear</references>
-        <references refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" compoundref="_p2_quantile_8_h" startline="22">n</references>
-        <references refid="class_p2_quantile_1addc82cea12c1248999df5383b0059faa" compoundref="_p2_quantile_8_h" startline="25">ns</references>
-        <references refid="class_p2_quantile_1aaa2fd757d5da710da9ebb277973543b6" compoundref="_p2_quantile_8_h" startline="19">p</references>
-        <references refid="class_p2_quantile_1a50380e40ef6e47a3513f8e5a7afbc538" compoundref="_p2_quantile_8_h" startline="36" endline="42">Parabolic</references>
-        <references refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" compoundref="_p2_quantile_8_h" startline="31">q</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p2_quantile_1abd1b5648cbc1cc830c78409ff1e2e88b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double P2Quantile::getQuantile</definition>
-        <argsstring>()</argsstring>
-        <name>getQuantile</name>
-        <qualifiedname>P2Quantile::getQuantile</qualifiedname>
-        <briefdescription>
-<para>Get the current quantile value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="117" column="10" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="117" bodyend="129"/>
-        <references refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" compoundref="_p2_quantile_8_h" startline="34">count</references>
-        <references refid="class_p2_quantile_1aaa2fd757d5da710da9ebb277973543b6" compoundref="_p2_quantile_8_h" startline="19">p</references>
-        <references refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" compoundref="_p2_quantile_8_h" startline="31">q</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p2_quantile_1a49074532c7ed55cc35184c1042d7196d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>P2Quantile::P2Quantile</definition>
-        <argsstring>(double prob=0.5)</argsstring>
-        <name>P2Quantile</name>
-        <qualifiedname>P2Quantile::P2Quantile</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>prob</declname>
-          <defval>0.5</defval>
-        </param>
-        <briefdescription>
-<para>Quantile constructor where. </para>
-        </briefdescription>
-        <detaileddescription>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>prob</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the quantile </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="52" column="3" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="52" bodyend="52"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p2_quantile_1a15679a32893b62bdc05028065a29db83" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void P2Quantile::reset</definition>
-        <argsstring>(double prob)</argsstring>
-        <name>reset</name>
-        <qualifiedname>P2Quantile::reset</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>prob</declname>
-        </param>
-        <briefdescription>
-<para>Change the probability value and reset. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="55" column="8" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="55" bodyend="59"/>
-        <references refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" compoundref="_p2_quantile_8_h" startline="34">count</references>
-        <references refid="class_p2_quantile_1aaa2fd757d5da710da9ebb277973543b6" compoundref="_p2_quantile_8_h" startline="19">p</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Implementation of the quantile estimator from:</para>
-<para>Jain, Raj, and Imrich Chlamtac. “The P² algorithm for dynamic calculation of quantiles and histograms without storing observations.” Communications of the ACM 28, no. 10 (1985): 1076-1085. </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/P2Quantile.H" line="14" column="1" bodyfile="/home/weinberg/Projects/EXP/include/P2Quantile.H" bodystart="15" bodyend="133"/>
-    <listofallmembers>
-      <member refid="class_p2_quantile_1ad83bed75bb2fef86468120607a44715d" prot="public" virt="non-virtual"><scope>P2Quantile</scope><name>addValue</name></member>
-      <member refid="class_p2_quantile_1a641da9f47f426687f50015db677de9ac" prot="private" virt="non-virtual"><scope>P2Quantile</scope><name>count</name></member>
-      <member refid="class_p2_quantile_1a5e7165f8caddccc724510ed0f5516df8" prot="private" virt="non-virtual"><scope>P2Quantile</scope><name>dns</name></member>
-      <member refid="class_p2_quantile_1abd1b5648cbc1cc830c78409ff1e2e88b" prot="public" virt="non-virtual"><scope>P2Quantile</scope><name>getQuantile</name></member>
-      <member refid="class_p2_quantile_1a24ed888c01f041d1f7f694f785f2d5b9" prot="private" virt="non-virtual"><scope>P2Quantile</scope><name>Linear</name></member>
-      <member refid="class_p2_quantile_1ab28d816f2758b6bb42525309e9bf9caa" prot="private" virt="non-virtual"><scope>P2Quantile</scope><name>n</name></member>
-      <member refid="class_p2_quantile_1addc82cea12c1248999df5383b0059faa" prot="private" virt="non-virtual"><scope>P2Quantile</scope><name>ns</name></member>
-      <member refid="class_p2_quantile_1aaa2fd757d5da710da9ebb277973543b6" prot="private" virt="non-virtual"><scope>P2Quantile</scope><name>p</name></member>
-      <member refid="class_p2_quantile_1a49074532c7ed55cc35184c1042d7196d" prot="public" virt="non-virtual"><scope>P2Quantile</scope><name>P2Quantile</name></member>
-      <member refid="class_p2_quantile_1a50380e40ef6e47a3513f8e5a7afbc538" prot="private" virt="non-virtual"><scope>P2Quantile</scope><name>Parabolic</name></member>
-      <member refid="class_p2_quantile_1a586b299bcac1a8987b94c99e8b8dac29" prot="private" virt="non-virtual"><scope>P2Quantile</scope><name>q</name></member>
-      <member refid="class_p2_quantile_1a15679a32893b62bdc05028065a29db83" prot="public" virt="non-virtual"><scope>P2Quantile</scope><name>reset</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_p_particle.xml b/doxyxml/class_p_particle.xml
deleted file mode 100644
index 2ad1ad2..0000000
--- a/doxyxml/class_p_particle.xml
+++ /dev/null
@@ -1,240 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_particle" kind="class" language="C++" prot="public">
-    <compoundname>PParticle</compoundname>
-    <includes refid="_p_s_p2_8_h" local="no">PSP2.H</includes>
-    <templateparamlist>
-      <param>
-        <type>typename real</type>
-      </param>
-    </templateparamlist>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_p_particle_1abe2a4ab9eb66a505dc05eaf332bf9725" prot="public" static="no" mutable="no">
-        <type>vector&lt; real &gt;</type>
-        <definition>vector&lt;real&gt; PParticle&lt; real &gt;::datr</definition>
-        <argsstring></argsstring>
-        <name>datr</name>
-        <qualifiedname>PParticle::datr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="52" column="12" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="52" bodyend="-1"/>
-        <referencedby refid="class_p_particle_1a9022093139ac21eacc21e678264253f8" compoundref="_p_s_p2_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-        <referencedby refid="class_p_particle_1a29377bba1dc57d0c277c1ad1e5b811c6" compoundref="_p_s_p_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_particle_1ac28bd560eb3f5fe530c79faed34c96db" prot="public" static="no" mutable="no">
-        <type>std::vector&lt; real &gt;</type>
-        <definition>std::vector&lt;real&gt; PParticle&lt; real &gt;::datr</definition>
-        <argsstring></argsstring>
-        <name>datr</name>
-        <qualifiedname>PParticle::datr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="52" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="52" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_particle_1a35bde61886d1d4ac16bec65ba458bb4b" prot="public" static="no" mutable="no">
-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; PParticle&lt; real &gt;::iatr</definition>
-        <argsstring></argsstring>
-        <name>iatr</name>
-        <qualifiedname>PParticle::iatr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="51" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="51" bodyend="-1"/>
-        <referencedby refid="class_p_particle_1a9022093139ac21eacc21e678264253f8" compoundref="_p_s_p2_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-        <referencedby refid="class_p_particle_1a29377bba1dc57d0c277c1ad1e5b811c6" compoundref="_p_s_p_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_particle_1a9c982910921fa8838981bbb167095d8e" prot="public" static="no" mutable="no">
-        <type>std::vector&lt; int &gt;</type>
-        <definition>std::vector&lt;int&gt; PParticle&lt; real &gt;::iatr</definition>
-        <argsstring></argsstring>
-        <name>iatr</name>
-        <qualifiedname>PParticle::iatr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="51" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="51" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_particle_1a4ea8f20fdb8947ed69b23d1970ee9e91" prot="public" static="no" mutable="no">
-        <type>unsigned long</type>
-        <definition>unsigned long PParticle&lt; real &gt;::indx</definition>
-        <argsstring></argsstring>
-        <name>indx</name>
-        <qualifiedname>PParticle::indx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="53" column="18" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="53" bodyend="-1"/>
-        <referencedby refid="class_p_particle_1a9022093139ac21eacc21e678264253f8" compoundref="_p_s_p2_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-        <referencedby refid="class_p_particle_1a29377bba1dc57d0c277c1ad1e5b811c6" compoundref="_p_s_p_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_particle_1a8b91e6a246ca00270720d5271a4cdb05" prot="public" static="no" mutable="no">
-        <type>real</type>
-        <definition>real PParticle&lt; real &gt;::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>PParticle::mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="46" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="46" bodyend="-1"/>
-        <referencedby refid="class_p_particle_1a9022093139ac21eacc21e678264253f8" compoundref="_p_s_p2_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-        <referencedby refid="class_p_particle_1a29377bba1dc57d0c277c1ad1e5b811c6" compoundref="_p_s_p_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_particle_1a0779ab6c2e489b40c405def3b60496bb" prot="public" static="no" mutable="no">
-        <type>real</type>
-        <definition>real PParticle&lt; real &gt;::phi</definition>
-        <argsstring></argsstring>
-        <name>phi</name>
-        <qualifiedname>PParticle::phi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="49" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="49" bodyend="-1"/>
-        <referencedby refid="class_p_particle_1a9022093139ac21eacc21e678264253f8" compoundref="_p_s_p2_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-        <referencedby refid="class_p_particle_1a29377bba1dc57d0c277c1ad1e5b811c6" compoundref="_p_s_p_8_h" startline="55" endline="86">PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_particle_1a146e6561f9a12ae05e99bc5c9aec3593" prot="public" static="no" mutable="no">
-        <type>real</type>
-        <definition>real PParticle&lt; real &gt;::pos</definition>
-        <argsstring>[3]</argsstring>
-        <name>pos</name>
-        <qualifiedname>PParticle::pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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diff --git a/doxyxml/class_p_r_1_1_gadget_h_d_f5.xml b/doxyxml/class_p_r_1_1_gadget_h_d_f5.xml
deleted file mode 100644
index 786992f..0000000
--- a/doxyxml/class_p_r_1_1_gadget_h_d_f5.xml
+++ /dev/null
@@ -1,445 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_r_1_1_gadget_h_d_f5" kind="class" language="C++" prot="public">
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-        <type>unsigned long</type>
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-        <type>double</type>
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-        <type></type>
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-        <name>GadgetHDF5</name>
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-        <type>const <ref refid="class_particle" kindref="compound">Particle</ref> *</type>
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-        <name>nextParticle</name>
-        <qualifiedname>PR::GadgetHDF5::nextParticle</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1a5768007e1583c7c59031fd611c699768">nextParticle</reimplements>
-        <briefdescription>
-<para>Get the next particle. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="226" column="28"/>
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-        <type>void</type>
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-        <name>SelectType</name>
-        <qualifiedname>PR::GadgetHDF5::SelectType</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1a63c8f579270234489399e7e920ee59bd">SelectType</reimplements>
-        <param>
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-          <declname>type</declname>
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-        <briefdescription>
-<para>Select a particular particle type and reset the iterator. </para>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="198" column="18" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="198" bodyend="211"/>
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-        <references refid="class_p_r_1_1_gadget_h_d_f5_1af78f7f5e85b12cdaa2f3c31a143e38f5" compoundref="_particle_reader_8_h" startline="181">findP</references>
-        <references refid="class_p_r_1_1_gadget_h_d_f5_1aaaf32192899eb8de5033069cc06af549">nextFile</references>
-        <references refid="class_p_r_1_1_gadget_h_d_f5_1a252c03e0601aa32390f1490f1f95b447" compoundref="_particle_reader_8_h" startline="183">ptype</references>
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-        <label>PR::GadgetHDF5</label>
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-        </childnode>
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-        <label>PR::ParticleReader</label>
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-        <label>PR::GadgetHDF5</label>
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-        </childnode>
-      </node>
-      <node id="2">
-        <label>PR::ParticleReader</label>
-        <link refid="class_p_r_1_1_particle_reader"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="163" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="164" bodyend="228"/>
-    <listofallmembers>
-      <member refid="class_p_r_1_1_particle_reader_1a0965aecd1dbd2f6fbd1cfb868f9e4723" prot="public" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>createReader</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1aee94616a8ca8176592b47f558662122e" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>curfile</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1ac26138eecb62ad48b6d838c8b4e9e487" prot="public" virt="virtual"><scope>PR::GadgetHDF5</scope><name>CurrentNumber</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1a9134eda7c9eeb4c7389b0b8725048fe6" prot="public" virt="virtual"><scope>PR::GadgetHDF5</scope><name>CurrentTime</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1af78f7f5e85b12cdaa2f3c31a143e38f5" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>findP</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1aa5d78d2bfe77626133c2018b6e9edbb2" prot="public" virt="virtual"><scope>PR::GadgetHDF5</scope><name>firstParticle</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1ad43a07a92f7607521812f78c2c53e356" prot="public" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>GadgetHDF5</name></member>
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-      <member refid="class_p_r_1_1_gadget_h_d_f5_1aa1e6ac26ae6c7bd3780e382fc31e7fb9" prot="public" virt="virtual"><scope>PR::GadgetHDF5</scope><name>GetTypes</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1a6396641f5b2ef27d896f43a7944cbf10" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>mass</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>myid</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1aaaf32192899eb8de5033069cc06af549" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>nextFile</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1ae4f7d5e8fed97bdb27a9b200c64b7b30" prot="public" virt="virtual"><scope>PR::GadgetHDF5</scope><name>nextParticle</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1a0bcc3af3db76b8a586da43feed3ace0a" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>npart</name></member>
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-      <member refid="class_p_r_1_1_gadget_h_d_f5_1ae24bdefb3cc8289a1ce9c8d60fc25204" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>packParticle</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1af5d10d72983a64c933650656ab8e616c" prot="public" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>parseFileList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a7ae979e31716b0cdf44f6da87f11d853" prot="public" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>parseStringList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1aff014ecb55fcf3bfdb2e4596ddbc8b20" prot="public" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>ParticleReader</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1a168a3a7257f33cc1351505e10e82ec59" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>particles</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1af8aaca4400042b4b65a796b9e9e270e0" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>pcount</name></member>
-      <member refid="class_p_r_1_1_gadget_h_d_f5_1a0c3ab2469a029cae0c14a65e1e699764" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>Pfound</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1ab23fba530a517ea46bd6f68fa46c659c" prot="public" virt="virtual"><scope>PR::GadgetHDF5</scope><name>PrintSummary</name></member>
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-      <member refid="class_p_r_1_1_particle_reader_1a321c230acfa8d63e36166e2789cb001a" prot="protected" virt="non-virtual"><scope>PR::GadgetHDF5</scope><name>use_mpi</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a44664d520e38091ae61b53340fe9ec3e" prot="public" virt="virtual"><scope>PR::GadgetHDF5</scope><name>~ParticleReader</name></member>
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-</doxygen>
diff --git a/doxyxml/class_p_r_1_1_gadget_native.xml b/doxyxml/class_p_r_1_1_gadget_native.xml
deleted file mode 100644
index 27be0d7..0000000
--- a/doxyxml/class_p_r_1_1_gadget_native.xml
+++ /dev/null
@@ -1,467 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_r_1_1_gadget_native" kind="class" language="C++" prot="public">
-    <compoundname>PR::GadgetNative</compoundname>
-    <basecompoundref refid="class_p_r_1_1_particle_reader" prot="public" virt="non-virtual">PR::ParticleReader</basecompoundref>
-    <includes refid="_particle_reader_8_h" local="no">ParticleReader.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_p_r_1_1_gadget_native_1ac490d912e586b47ba6568d2c9c9ae692" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::string &gt;::iterator</type>
-        <definition>std::vector&lt;std::string&gt;::iterator PR::GadgetNative::curfile</definition>
-        <argsstring></argsstring>
-        <name>curfile</name>
-        <qualifiedname>PR::GadgetNative::curfile</qualifiedname>
-        <briefdescription>
-<para>Current file. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="109" column="28" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="109" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_p_r_1_1_gadget_native_1a12b10e7ce993cb63b34171631f861bec" prot="private" static="no" mutable="no">
-        <type><ref refid="structgadget__header" kindref="compound">gadget_header</ref></type>
-        <definition>gadget_header PR::GadgetNative::header</definition>
-        <argsstring></argsstring>
-        <name>header</name>
-        <qualifiedname>PR::GadgetNative::header</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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diff --git a/doxyxml/class_p_r_1_1_p_particle.xml b/doxyxml/class_p_r_1_1_p_particle.xml
deleted file mode 100644
index 939d1f0..0000000
--- a/doxyxml/class_p_r_1_1_p_particle.xml
+++ /dev/null
@@ -1,139 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_r_1_1_p_particle" kind="class" language="C++" prot="public">
-    <compoundname>PR::PParticle</compoundname>
-    <basecompoundref refid="class_particle" prot="public" virt="non-virtual">Particle</basecompoundref>
-    <includes refid="_particle_reader_8_h" local="no">ParticleReader.H</includes>
-    <templateparamlist>
-      <param>
-        <type>typename real</type>
-      </param>
-    </templateparamlist>
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-        <type>void</type>
-        <definition>void PR::PParticle&lt; real &gt;::read</definition>
-        <argsstring>(std::istream &amp;in, int pcount, list&lt; PSPstanza &gt;::iterator spos)</argsstring>
-        <name>read</name>
-        <qualifiedname>PR::PParticle::read</qualifiedname>
-        <param>
-          <type>std::istream &amp;</type>
-          <declname>in</declname>
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-        <param>
-          <type>int</type>
-          <declname>pcount</declname>
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-        <param>
-          <type>list&lt; <ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref> &gt;::iterator</type>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="267" column="10" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="267" bodyend="309"/>
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-        <references refid="class_particle_1a041051e4763a83554abed7304dfda4a7" compoundref="include_2_particle_8_h" startline="67">Particle::indx</references>
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-        <references refid="class_particle_1a3606e8a85c0b5ef30d7cf2777907e58e" compoundref="include_2_particle_8_h" startline="34">Particle::pos</references>
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-        <type>void</type>
-        <definition>void PR::PParticle&lt; real &gt;::skip</definition>
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-        <name>skip</name>
-        <qualifiedname>PR::PParticle::skip</qualifiedname>
-        <param>
-          <type>std::istream &amp;</type>
-          <declname>in</declname>
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-        <param>
-          <type>int</type>
-          <declname>pcount</declname>
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-        <param>
-          <type>list&lt; <ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref> &gt;::iterator</type>
-          <declname>spos</declname>
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-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="311" column="10" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="311" bodyend="320"/>
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-    <detaileddescription>
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-      <node id="1">
-        <label>PR::PParticle&lt; real &gt;</label>
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-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Particle</label>
-        <link refid="class_particle"/>
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-    <collaborationgraph>
-      <node id="1">
-        <label>PR::PParticle&lt; real &gt;</label>
-        <link refid="class_p_r_1_1_p_particle"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Particle</label>
-        <link refid="class_particle"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="254" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="255" bodyend="322"/>
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-      <member refid="class_particle_1ac575fbf68c83530ee242ba22fb38a264" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>acc</name></member>
-      <member refid="class_particle_1a1fb0b2da600a8ad44057823c19938515" prot="private" virt="non-virtual"><scope>PR::PParticle</scope><name>buffer</name></member>
-      <member refid="class_particle_1a04153827c29d7a278023801845f9c8f3" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>dattrib</name></member>
-      <member refid="class_particle_1a82e75d23385a26273d1d33fdde947a4a" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>defaultKey</name></member>
-      <member refid="class_particle_1aab8165b0c94a793caa326da0b1a5ed60" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>dtreq</name></member>
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-      <member refid="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>iattrib</name></member>
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-      <member refid="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a56a5ccec698415615a050e9bfd820b3a" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a875d390662507790e0b248f53bff2ad1" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a65da555cae2b76c9a6476797f3bbec14" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a3606e8a85c0b5ef30d7cf2777907e58e" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>pos</name></member>
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-      <member refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>read</name></member>
-      <member refid="class_particle_1ad619d82125defc278a08e2908b6115c7" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>readAscii</name></member>
-      <member refid="class_particle_1a5522f47432b7ed4de4584dbea0ac12c7" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>readBinary</name></member>
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-      <member refid="class_particle_1a6a0d56643139eafef77b04372098e34a" prot="public" virt="non-virtual"><scope>PR::PParticle</scope><name>writeBinaryMPI</name></member>
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diff --git a/doxyxml/class_p_r_1_1_p_s_p.xml b/doxyxml/class_p_r_1_1_p_s_p.xml
deleted file mode 100644
index 2be7b81..0000000
--- a/doxyxml/class_p_r_1_1_p_s_p.xml
+++ /dev/null
@@ -1,737 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_r_1_1_p_s_p" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>PR::PSP</compoundname>
-    <basecompoundref refid="class_p_r_1_1_particle_reader" prot="public" virt="non-virtual">PR::ParticleReader</basecompoundref>
-    <derivedcompoundref refid="class_p_r_1_1_p_s_pout" prot="public" virt="non-virtual">PR::PSPout</derivedcompoundref>
-    <derivedcompoundref refid="class_p_r_1_1_p_s_pspl" prot="public" virt="non-virtual">PR::PSPspl</derivedcompoundref>
-    <includes refid="_particle_reader_8_h" local="no">ParticleReader.H</includes>
-    <sectiondef kind="protected-static-attrib">
-      <memberdef kind="variable" id="class_p_r_1_1_p_s_p_1a12424e52bab67a14df6596a84a1dfbf0" prot="protected" static="yes" mutable="no">
-        <type>const unsigned long</type>
-        <definition>const unsigned long PR::PSP::magic</definition>
-        <argsstring></argsstring>
-        <name>magic</name>
-        <qualifiedname>PR::PSP::magic</qualifiedname>
-        <initializer>= 0xadbfabc0</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <argsstring></argsstring>
-        <name>mmask</name>
-        <qualifiedname>PR::PSP::mmask</qualifiedname>
-        <initializer>= 0xf</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>const unsigned long</type>
-        <definition>const unsigned long PR::PSP::nmask</definition>
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-        <type><ref refid="class_master_header" kindref="compound">MasterHeader</ref></type>
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-<para>Temporaries for stanza statistics. </para>
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-        <type>int</type>
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-        <type>std::vector&lt; double &gt;</type>
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-        <definition>virtual PSPstanza * PR::PSP::GetNamed</definition>
-        <argsstring>(const std::string &amp;name)</argsstring>
-        <name>GetNamed</name>
-        <qualifiedname>PR::PSP::GetNamed</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Set stanza to name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="380" column="23" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="380" bodyend="389"/>
-        <references refid="class_p_r_1_1_p_s_p_1aa97fe74ea485da5231a34720f33f3126" compoundref="_particle_reader_8_h" startline="340">cur</references>
-        <references refid="class_p_r_1_1_p_s_pstanza_1adcf57e7c7e3259c89e16925e1240d240" compoundref="_particle_reader_8_h" startline="234">PR::PSPstanza::name</references>
-        <references refid="class_p_r_1_1_p_s_p_1a8e6869ea4615051c89d7fab466df84f7" compoundref="_particle_reader_8_h" startline="339">spos</references>
-        <references refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" compoundref="_particle_reader_8_h" startline="338">stanzas</references>
-        <referencedby refid="class_p_r_1_1_p_s_p_1a3c5ed37a3c7a2311f368f287a36cbfcc" compoundref="_particle_reader_8_h" startline="399" endline="404">SelectType</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1aac293b9ac96890e4d94a62efbfd39fc4" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>virtual PSPstanza * PR::PSP::GetStanza</definition>
-        <argsstring>()</argsstring>
-        <name>GetStanza</name>
-        <qualifiedname>PR::PSP::GetStanza</qualifiedname>
-        <briefdescription>
-<para>Reset to beginning of stanza list and return null if no stanzas. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="410" column="23"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1aad3b887d40b88207ea894fc0024c4884" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>std::vector&lt; std::string &gt;</type>
-        <definition>std::vector&lt; std::string &gt; PR::PSP::GetTypes</definition>
-        <argsstring>()</argsstring>
-        <name>GetTypes</name>
-        <qualifiedname>PR::PSP::GetTypes</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1aaa7bdf2a176d8446e6229fd03256ab58">GetTypes</reimplements>
-        <briefdescription>
-<para>Return list of particle types. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="391" column="17" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="391" bodyend="396"/>
-        <references refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" compoundref="_particle_reader_8_h" startline="338">stanzas</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1aa1049c277a7602af55f565d299cc3042" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>const <ref refid="class_particle" kindref="compound">Particle</ref> *</type>
-        <definition>virtual const Particle * PR::PSP::nextParticle</definition>
-        <argsstring>()=0</argsstring>
-        <name>nextParticle</name>
-        <qualifiedname>PR::PSP::nextParticle</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1a5768007e1583c7c59031fd611c699768">nextParticle</reimplements>
-        <reimplementedby refid="class_p_r_1_1_p_s_pout_1addda79bc2ff8cad57564329ecc24e347">nextParticle</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_p_s_pspl_1a2e0e812854ced4ea81424e553605e6fc">nextParticle</reimplementedby>
-        <briefdescription>
-<para>Get the next particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="421" column="28"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1a73724dc649c5f4814cdd955c36e901e0" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_p_r_1_1_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>virtual PSPstanza * PR::PSP::NextStanza</definition>
-        <argsstring>()</argsstring>
-        <name>NextStanza</name>
-        <qualifiedname>PR::PSP::NextStanza</qualifiedname>
-        <briefdescription>
-<para>Get next stanza in list and return null at end;. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="413" column="23"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1a3db00a81bbfad079f5d903a150ab695c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PR::PSP::PrintSummary</definition>
-        <argsstring>(ostream &amp;out, bool stats=false, bool timeonly=false)</argsstring>
-        <name>PrintSummary</name>
-        <qualifiedname>PR::PSP::PrintSummary</qualifiedname>
-        <param>
-          <type>ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>stats</declname>
-          <defval>false</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>timeonly</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Print summary phase-space info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="377" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1a8e16d6172c04d65dcc3caac13e619bb7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>PR::PSP::PSP</definition>
-        <argsstring>(bool verbose)</argsstring>
-        <name>PSP</name>
-        <qualifiedname>PR::PSP::PSP</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-        </param>
-        <briefdescription>
-<para>Default constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="368" column="5" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="368" bodyend="368"/>
-        <references refid="class_p_r_1_1_p_s_p_1abe920a1152f5c03fb3505e5cf51041df" compoundref="_particle_reader_8_h" startline="358" endline="363">init</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1a3c5ed37a3c7a2311f368f287a36cbfcc" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PR::PSP::SelectType</definition>
-        <argsstring>(const std::string &amp;name)</argsstring>
-        <name>SelectType</name>
-        <qualifiedname>PR::PSP::SelectType</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1a63c8f579270234489399e7e920ee59bd">SelectType</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Set to type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="399" column="18" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="399" bodyend="404"/>
-        <references refid="class_p_r_1_1_p_s_p_1afb271968385451704400b13eb9ed66b0" compoundref="_particle_reader_8_h" startline="380" endline="389">GetNamed</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1aa87bdd1965311624af398338f3d9c928" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PR::PSP::writePSP</definition>
-        <argsstring>(std::ostream &amp;out, bool real4)</argsstring>
-        <name>writePSP</name>
-        <qualifiedname>PR::PSP::writePSP</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-        </param>
-        <briefdescription>
-<para>Write a new <ref refid="class_p_r_1_1_p_s_p" kindref="compound">PSP</ref> file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="416" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_p_1aabf80c9f67ccfd25beb1abe1d6354825" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual PR::PSP::~PSP</definition>
-        <argsstring>()</argsstring>
-        <name>~PSP</name>
-        <qualifiedname>PR::PSP::~PSP</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="371" column="13" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="371" bodyend="371"/>
-        <references refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" compoundref="_particle_reader_8_h" startline="347">in</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>PR::PSP</label>
-        <link refid="class_p_r_1_1_p_s_p"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PR::PSPout</label>
-        <link refid="class_p_r_1_1_p_s_pout"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PR::PSPspl</label>
-        <link refid="class_p_r_1_1_p_s_pspl"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PR::ParticleReader</label>
-        <link refid="class_p_r_1_1_particle_reader"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="5">
-        <label>ComponentHeader</label>
-        <link refid="class_component_header"/>
-      </node>
-      <node id="3">
-        <label>MasterHeader</label>
-        <link refid="class_master_header"/>
-      </node>
-      <node id="8">
-        <label>PR::PParticle&lt; double &gt;</label>
-        <link refid="class_p_r_1_1_p_particle"/>
-        <childnode refid="7" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>PR::PParticle&lt; float &gt;</label>
-        <link refid="class_p_r_1_1_p_particle"/>
-        <childnode refid="7" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>PR::PSP</label>
-        <link refid="class_p_r_1_1_p_s_p"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>header</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cur</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>fpart</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>dpart</edgelabel>
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PR::PSPstanza</label>
-        <link refid="class_p_r_1_1_p_s_pstanza"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>comp</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PR::ParticleReader</label>
-        <link refid="class_p_r_1_1_particle_reader"/>
-      </node>
-      <node id="7">
-        <label>Particle</label>
-        <link refid="class_particle"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="325" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="326" bodyend="423"/>
-    <listofallmembers>
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-      <member refid="class_p_r_1_1_particle_reader_1a0965aecd1dbd2f6fbd1cfb868f9e4723" prot="public" virt="non-virtual"><scope>PR::PSP</scope><name>createReader</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa97fe74ea485da5231a34720f33f3126" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>cur</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a30508c9bcea21d4c88f3bb097935c13d" prot="public" virt="virtual"><scope>PR::PSP</scope><name>CurrentNumber</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1adceed7e0b520c1e2b97875428fad369c" prot="public" virt="virtual"><scope>PR::PSP</scope><name>CurrentTime</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1ab040502b6884fdd165b4e34176c2d41e" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>dpart</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a5c7372c606bfa1860e47f80abb50dc41" prot="public" virt="pure-virtual"><scope>PR::PSP</scope><name>firstParticle</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1afe9d8e39d4211db9161dcc9aac41aff2" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>fpart</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1afb271968385451704400b13eb9ed66b0" prot="public" virt="virtual"><scope>PR::PSP</scope><name>GetNamed</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aac293b9ac96890e4d94a62efbfd39fc4" prot="public" virt="virtual"><scope>PR::PSP</scope><name>GetStanza</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aad3b887d40b88207ea894fc0024c4884" prot="public" virt="virtual"><scope>PR::PSP</scope><name>GetTypes</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a04d41b889b796fb902bd73956c504935" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>header</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>in</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1abe920a1152f5c03fb3505e5cf51041df" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>init</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a12424e52bab67a14df6596a84a1dfbf0" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>magic</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa1a016605ba6d8ac681dc57c95b856ea" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>mmask</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aee7068c55f7839c92f0de0be5cd92c7d" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>mtot</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>myid</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa1049c277a7602af55f565d299cc3042" prot="public" virt="pure-virtual"><scope>PR::PSP</scope><name>nextParticle</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a73724dc649c5f4814cdd955c36e901e0" prot="public" virt="virtual"><scope>PR::PSP</scope><name>NextStanza</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1ae03de96b330fbc496203a944c9d8155d" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>nmask</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1abeb9841e4af7a88c1cf1293c7d59dfd7" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>numprocs</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1af5d10d72983a64c933650656ab8e616c" prot="public" virt="non-virtual"><scope>PR::PSP</scope><name>parseFileList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a7ae979e31716b0cdf44f6da87f11d853" prot="public" virt="non-virtual"><scope>PR::PSP</scope><name>parseStringList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1aff014ecb55fcf3bfdb2e4596ddbc8b20" prot="public" virt="non-virtual"><scope>PR::PSP</scope><name>ParticleReader</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a3d9f66a7c77203d1caa22bf738d60b5e" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>pcount</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1abe6860a6f676e6a33d0c40d50e7c8350" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>pmax</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a6fdce0cb920f7dfdea11359bf3f886af" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>pmed</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa1481a5cdbf370f85a807129eca9430d" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>pmin</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a3db00a81bbfad079f5d903a150ab695c" prot="public" virt="non-virtual"><scope>PR::PSP</scope><name>PrintSummary</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1ab23fba530a517ea46bd6f68fa46c659c" prot="public" virt="virtual" ambiguityscope="PR::ParticleReader::"><scope>PR::PSP</scope><name>PrintSummary</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a8e16d6172c04d65dcc3caac13e619bb7" prot="public" virt="non-virtual"><scope>PR::PSP</scope><name>PSP</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a6d0293092f653021b87b779bb2d20bc2" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>readerTypes</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a3c5ed37a3c7a2311f368f287a36cbfcc" prot="public" virt="virtual"><scope>PR::PSP</scope><name>SelectType</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a8e6869ea4615051c89d7fab466df84f7" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>spos</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>stanzas</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a321c230acfa8d63e36166e2789cb001a" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>use_mpi</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a3018193d989bfd8e85197323bff9d915" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>VERBOSE</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a423891dd160ef3e7f653ebc770111009" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>vmax</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a0fae17f0db9e902d6bcd988c58655ab2" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>vmed</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1ad84fbdde4036eda1dbbc48e52a3acd6b" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>vmin</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1ab8025923eeff5ec56ce3512b95c66317" prot="protected" virt="non-virtual"><scope>PR::PSP</scope><name>write_binary</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa87bdd1965311624af398338f3d9c928" prot="public" virt="non-virtual"><scope>PR::PSP</scope><name>writePSP</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a44664d520e38091ae61b53340fe9ec3e" prot="public" virt="virtual"><scope>PR::PSP</scope><name>~ParticleReader</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aabf80c9f67ccfd25beb1abe1d6354825" prot="public" virt="virtual"><scope>PR::PSP</scope><name>~PSP</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_p_r_1_1_p_s_pout.xml b/doxyxml/class_p_r_1_1_p_s_pout.xml
deleted file mode 100644
index f98593f..0000000
--- a/doxyxml/class_p_r_1_1_p_s_pout.xml
+++ /dev/null
@@ -1,232 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_r_1_1_p_s_pout" kind="class" language="C++" prot="public">
-    <compoundname>PR::PSPout</compoundname>
-    <basecompoundref refid="class_p_r_1_1_p_s_p" prot="public" virt="non-virtual">PR::PSP</basecompoundref>
-    <includes refid="_particle_reader_8_h" local="no">ParticleReader.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_p_r_1_1_p_s_pout_1ac2a29bde3ef885cb479142b7a0e1d25a" prot="private" static="no" mutable="no">
-        <type>streampos</type>
-        <definition>streampos PR::PSPout::pos</definition>
-        <argsstring></argsstring>
-        <name>pos</name>
-        <qualifiedname>PR::PSPout::pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="432" column="15" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="432" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
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-        <type>const <ref refid="class_particle" kindref="compound">Particle</ref> *</type>
-        <definition>virtual const Particle * PR::PSPout::firstParticle</definition>
-        <argsstring>()</argsstring>
-        <name>firstParticle</name>
-        <qualifiedname>PR::PSPout::firstParticle</qualifiedname>
-        <reimplements refid="class_p_r_1_1_p_s_p_1a5c7372c606bfa1860e47f80abb50dc41">firstParticle</reimplements>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> access. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="444" column="28"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_pout_1addda79bc2ff8cad57564329ecc24e347" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>const <ref refid="class_particle" kindref="compound">Particle</ref> *</type>
-        <definition>virtual const Particle * PR::PSPout::nextParticle</definition>
-        <argsstring>()</argsstring>
-        <name>nextParticle</name>
-        <qualifiedname>PR::PSPout::nextParticle</qualifiedname>
-        <reimplements refid="class_p_r_1_1_p_s_p_1aa1049c277a7602af55f565d299cc3042">nextParticle</reimplements>
-        <briefdescription>
-<para>Get the next particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="445" column="28"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_pout_1a4448dec760b8cd2dfa763a1d20624f36" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>PR::PSPout::PSPout</definition>
-        <argsstring>(const std::vector&lt; std::string &gt; &amp;file, bool verbose=false)</argsstring>
-        <name>PSPout</name>
-        <qualifiedname>PR::PSPout::PSPout</qualifiedname>
-        <param>
-          <type>const std::vector&lt; std::string &gt; &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="437" column="5"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_p_s_pout_1a7b18e8184d94cf8ae31a5210ba1a1d78" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual PR::PSPout::~PSPout</definition>
-        <argsstring>()</argsstring>
-        <name>~PSPout</name>
-        <qualifiedname>PR::PSPout::~PSPout</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="440" column="13" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="440" bodyend="440"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Class to access a full <ref refid="class_p_r_1_1_p_s_p" kindref="compound">PSP</ref> file (OUT) </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>PR::PSP</label>
-        <link refid="class_p_r_1_1_p_s_p"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>PR::PSPout</label>
-        <link refid="class_p_r_1_1_p_s_pout"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PR::ParticleReader</label>
-        <link refid="class_p_r_1_1_particle_reader"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="6">
-        <label>ComponentHeader</label>
-        <link refid="class_component_header"/>
-      </node>
-      <node id="4">
-        <label>MasterHeader</label>
-        <link refid="class_master_header"/>
-      </node>
-      <node id="9">
-        <label>PR::PParticle&lt; double &gt;</label>
-        <link refid="class_p_r_1_1_p_particle"/>
-        <childnode refid="8" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>PR::PParticle&lt; float &gt;</label>
-        <link refid="class_p_r_1_1_p_particle"/>
-        <childnode refid="8" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PR::PSP</label>
-        <link refid="class_p_r_1_1_p_s_p"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>header</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cur</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>fpart</edgelabel>
-        </childnode>
-        <childnode refid="9" relation="usage">
-          <edgelabel>dpart</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>PR::PSPout</label>
-        <link refid="class_p_r_1_1_p_s_pout"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PR::PSPstanza</label>
-        <link refid="class_p_r_1_1_p_s_pstanza"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>comp</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PR::ParticleReader</label>
-        <link refid="class_p_r_1_1_particle_reader"/>
-      </node>
-      <node id="8">
-        <label>Particle</label>
-        <link refid="class_particle"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="429" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="430" bodyend="447"/>
-    <listofallmembers>
-      <member refid="class_p_r_1_1_p_s_p_1a88ca1aef25d9b850adf02f2c767837bb" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>ComputeStats</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a0965aecd1dbd2f6fbd1cfb868f9e4723" prot="public" virt="non-virtual"><scope>PR::PSPout</scope><name>createReader</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa97fe74ea485da5231a34720f33f3126" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>cur</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a30508c9bcea21d4c88f3bb097935c13d" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>CurrentNumber</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1adceed7e0b520c1e2b97875428fad369c" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>CurrentTime</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1ab040502b6884fdd165b4e34176c2d41e" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>dpart</name></member>
-      <member refid="class_p_r_1_1_p_s_pout_1a8bfaa7b449c0a698fd6839330d89503e" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>firstParticle</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1afe9d8e39d4211db9161dcc9aac41aff2" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>fpart</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1afb271968385451704400b13eb9ed66b0" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>GetNamed</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aac293b9ac96890e4d94a62efbfd39fc4" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>GetStanza</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aad3b887d40b88207ea894fc0024c4884" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>GetTypes</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a04d41b889b796fb902bd73956c504935" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>header</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>in</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1abe920a1152f5c03fb3505e5cf51041df" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>init</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a12424e52bab67a14df6596a84a1dfbf0" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>magic</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa1a016605ba6d8ac681dc57c95b856ea" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>mmask</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aee7068c55f7839c92f0de0be5cd92c7d" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>mtot</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>myid</name></member>
-      <member refid="class_p_r_1_1_p_s_pout_1addda79bc2ff8cad57564329ecc24e347" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>nextParticle</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a73724dc649c5f4814cdd955c36e901e0" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>NextStanza</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1ae03de96b330fbc496203a944c9d8155d" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>nmask</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1abeb9841e4af7a88c1cf1293c7d59dfd7" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>numprocs</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1af5d10d72983a64c933650656ab8e616c" prot="public" virt="non-virtual"><scope>PR::PSPout</scope><name>parseFileList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a7ae979e31716b0cdf44f6da87f11d853" prot="public" virt="non-virtual"><scope>PR::PSPout</scope><name>parseStringList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1aff014ecb55fcf3bfdb2e4596ddbc8b20" prot="public" virt="non-virtual"><scope>PR::PSPout</scope><name>ParticleReader</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a3d9f66a7c77203d1caa22bf738d60b5e" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>pcount</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1abe6860a6f676e6a33d0c40d50e7c8350" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>pmax</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a6fdce0cb920f7dfdea11359bf3f886af" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>pmed</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa1481a5cdbf370f85a807129eca9430d" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>pmin</name></member>
-      <member refid="class_p_r_1_1_p_s_pout_1ac2a29bde3ef885cb479142b7a0e1d25a" prot="private" virt="non-virtual"><scope>PR::PSPout</scope><name>pos</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a3db00a81bbfad079f5d903a150ab695c" prot="public" virt="non-virtual"><scope>PR::PSPout</scope><name>PrintSummary</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1ab23fba530a517ea46bd6f68fa46c659c" prot="public" virt="virtual" ambiguityscope="PR::ParticleReader::"><scope>PR::PSPout</scope><name>PrintSummary</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a8e16d6172c04d65dcc3caac13e619bb7" prot="public" virt="non-virtual"><scope>PR::PSPout</scope><name>PSP</name></member>
-      <member refid="class_p_r_1_1_p_s_pout_1a4448dec760b8cd2dfa763a1d20624f36" prot="public" virt="non-virtual"><scope>PR::PSPout</scope><name>PSPout</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a6d0293092f653021b87b779bb2d20bc2" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>readerTypes</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a3c5ed37a3c7a2311f368f287a36cbfcc" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>SelectType</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a8e6869ea4615051c89d7fab466df84f7" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>spos</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a504414a3e5b8de80429d5ebd66fd3b4e" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>stanzas</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a321c230acfa8d63e36166e2789cb001a" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>use_mpi</name></member>
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-      <member refid="class_p_r_1_1_p_s_p_1a423891dd160ef3e7f653ebc770111009" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>vmax</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a0fae17f0db9e902d6bcd988c58655ab2" prot="protected" virt="non-virtual"><scope>PR::PSPout</scope><name>vmed</name></member>
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-      <member refid="class_p_r_1_1_particle_reader_1a44664d520e38091ae61b53340fe9ec3e" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>~ParticleReader</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aabf80c9f67ccfd25beb1abe1d6354825" prot="public" virt="virtual"><scope>PR::PSPout</scope><name>~PSP</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_p_r_1_1_p_s_pspl.xml b/doxyxml/class_p_r_1_1_p_s_pspl.xml
deleted file mode 100644
index 9ba3d23..0000000
--- a/doxyxml/class_p_r_1_1_p_s_pspl.xml
+++ /dev/null
@@ -1,280 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_r_1_1_p_s_pspl" kind="class" language="C++" prot="public">
-    <compoundname>PR::PSPspl</compoundname>
-    <basecompoundref refid="class_p_r_1_1_p_s_p" prot="public" virt="non-virtual">PR::PSP</basecompoundref>
-    <includes refid="_particle_reader_8_h" local="no">ParticleReader.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_p_r_1_1_p_s_pspl_1ac97232104903c00093da6ab3a1f01cf1" prot="private" static="no" mutable="no">
-        <type>unsigned int</type>
-        <definition>unsigned int PR::PSPspl::fcount</definition>
-        <argsstring></argsstring>
-        <name>fcount</name>
-        <qualifiedname>PR::PSPspl::fcount</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; std::string &gt;::iterator</type>
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-        <definition>unsigned int PR::PSPspl::N</definition>
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-        <type>void</type>
-        <definition>void PR::PSPspl::openNextBlob</definition>
-        <argsstring>()</argsstring>
-        <name>openNextBlob</name>
-        <qualifiedname>PR::PSPspl::openNextBlob</qualifiedname>
-        <briefdescription>
-<para>Open next file part. </para>
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-        <detaileddescription>
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-<para>Destructor. </para>
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-<para>Class to access a SPLIT <ref refid="class_p_r_1_1_p_s_p" kindref="compound">PSP</ref> file (SPL) </para>
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-        <label>PR::PParticle&lt; double &gt;</label>
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-        </childnode>
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-        <label>PR::PSPstanza</label>
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-          <edgelabel>comp</edgelabel>
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-        <label>Particle</label>
-        <link refid="class_particle"/>
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-    <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="452" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="453" bodyend="475"/>
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-      <member refid="class_p_r_1_1_p_s_p_1ab040502b6884fdd165b4e34176c2d41e" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>dpart</name></member>
-      <member refid="class_p_r_1_1_p_s_pspl_1ac97232104903c00093da6ab3a1f01cf1" prot="private" virt="non-virtual"><scope>PR::PSPspl</scope><name>fcount</name></member>
-      <member refid="class_p_r_1_1_p_s_pspl_1ad7a167749de40943fc65d3a17cf75cf7" prot="public" virt="virtual"><scope>PR::PSPspl</scope><name>firstParticle</name></member>
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-      <member refid="class_p_r_1_1_p_s_p_1aac293b9ac96890e4d94a62efbfd39fc4" prot="public" virt="virtual"><scope>PR::PSPspl</scope><name>GetStanza</name></member>
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-      <member refid="class_p_r_1_1_p_s_p_1a04d41b889b796fb902bd73956c504935" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>header</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a5e8e396a696710d0897774f06d65d817" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>in</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1abe920a1152f5c03fb3505e5cf51041df" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>init</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a12424e52bab67a14df6596a84a1dfbf0" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>magic</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aa1a016605ba6d8ac681dc57c95b856ea" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>mmask</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aee7068c55f7839c92f0de0be5cd92c7d" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>mtot</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>myid</name></member>
-      <member refid="class_p_r_1_1_p_s_pspl_1aa5293538b772d83be817aa01c911bfc8" prot="private" virt="non-virtual"><scope>PR::PSPspl</scope><name>N</name></member>
-      <member refid="class_p_r_1_1_p_s_pspl_1a2e0e812854ced4ea81424e553605e6fc" prot="public" virt="virtual"><scope>PR::PSPspl</scope><name>nextParticle</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a73724dc649c5f4814cdd955c36e901e0" prot="public" virt="virtual"><scope>PR::PSPspl</scope><name>NextStanza</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1ae03de96b330fbc496203a944c9d8155d" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>nmask</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1abeb9841e4af7a88c1cf1293c7d59dfd7" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>numprocs</name></member>
-      <member refid="class_p_r_1_1_p_s_pspl_1af5c92c57704a41091895daa0ec879572" prot="private" virt="non-virtual"><scope>PR::PSPspl</scope><name>openNextBlob</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1af5d10d72983a64c933650656ab8e616c" prot="public" virt="non-virtual"><scope>PR::PSPspl</scope><name>parseFileList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a7ae979e31716b0cdf44f6da87f11d853" prot="public" virt="non-virtual"><scope>PR::PSPspl</scope><name>parseStringList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1aff014ecb55fcf3bfdb2e4596ddbc8b20" prot="public" virt="non-virtual"><scope>PR::PSPspl</scope><name>ParticleReader</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1a3d9f66a7c77203d1caa22bf738d60b5e" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>pcount</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1abe6860a6f676e6a33d0c40d50e7c8350" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>pmax</name></member>
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-      <member refid="class_p_r_1_1_p_s_pspl_1a616927352631db61f3f035edbb5df842" prot="public" virt="non-virtual"><scope>PR::PSPspl</scope><name>PSPspl</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a6d0293092f653021b87b779bb2d20bc2" prot="protected" virt="non-virtual"><scope>PR::PSPspl</scope><name>readerTypes</name></member>
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-      <member refid="class_p_r_1_1_particle_reader_1a44664d520e38091ae61b53340fe9ec3e" prot="public" virt="virtual"><scope>PR::PSPspl</scope><name>~ParticleReader</name></member>
-      <member refid="class_p_r_1_1_p_s_p_1aabf80c9f67ccfd25beb1abe1d6354825" prot="public" virt="virtual"><scope>PR::PSPspl</scope><name>~PSP</name></member>
-      <member refid="class_p_r_1_1_p_s_pspl_1a5ff3e5af49872c8de1c3f13fd6f5ef10" prot="public" virt="virtual"><scope>PR::PSPspl</scope><name>~PSPspl</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_p_r_1_1_p_s_pstanza.xml b/doxyxml/class_p_r_1_1_p_s_pstanza.xml
deleted file mode 100644
index 8d40779..0000000
--- a/doxyxml/class_p_r_1_1_p_s_pstanza.xml
+++ /dev/null
@@ -1,204 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_r_1_1_p_s_pstanza" kind="class" language="C++" prot="public">
-    <compoundname>PR::PSPstanza</compoundname>
-    <includes refid="_particle_reader_8_h" local="no">ParticleReader.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_p_r_1_1_p_s_pstanza_1a5c41938956df85748e6be52e2ec21b8d" prot="public" static="no" mutable="no">
-        <type><ref refid="class_component_header" kindref="compound">ComponentHeader</ref></type>
-        <definition>ComponentHeader PR::PSPstanza::comp</definition>
-        <argsstring></argsstring>
-        <name>comp</name>
-        <qualifiedname>PR::PSPstanza::comp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="233" column="21" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="233" bodyend="-1"/>
-        <referencedby refid="class_p_r_1_1_p_s_p_1a30508c9bcea21d4c88f3bb097935c13d" compoundref="_particle_reader_8_h" startline="407" endline="407">PR::PSP::CurrentNumber</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_r_1_1_p_s_pstanza_1af91a2d243eeea39805289013945d7a34" prot="public" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string PR::PSPstanza::cparam</definition>
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diff --git a/doxyxml/class_p_r_1_1_particle_reader.xml b/doxyxml/class_p_r_1_1_particle_reader.xml
deleted file mode 100644
index a4ab3b4..0000000
--- a/doxyxml/class_p_r_1_1_particle_reader.xml
+++ /dev/null
@@ -1,407 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <derivedcompoundref refid="class_p_r_1_1_gadget_h_d_f5" prot="public" virt="non-virtual">PR::GadgetHDF5</derivedcompoundref>
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-    <includes refid="_particle_reader_8_h" local="no">ParticleReader.H</includes>
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-        <type>const <ref refid="class_particle" kindref="compound">Particle</ref> *</type>
-        <definition>virtual const Particle * PR::ParticleReader::nextParticle</definition>
-        <argsstring>()=0</argsstring>
-        <name>nextParticle</name>
-        <qualifiedname>PR::ParticleReader::nextParticle</qualifiedname>
-        <reimplementedby refid="class_p_r_1_1_gadget_native_1acba766d12aa59d40490d77b805a86628">nextParticle</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_gadget_h_d_f5_1ae4f7d5e8fed97bdb27a9b200c64b7b30">nextParticle</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_p_s_pout_1addda79bc2ff8cad57564329ecc24e347">nextParticle</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_p_s_pspl_1a2e0e812854ced4ea81424e553605e6fc">nextParticle</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_tipsy_1a614737fbbdddfde0987a85dbcbc926d4">nextParticle</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_p_s_p_1aa1049c277a7602af55f565d299cc3042">nextParticle</reimplementedby>
-        <briefdescription>
-<para>Get the next particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="76" column="28"/>
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-      <memberdef kind="function" id="class_p_r_1_1_particle_reader_1aff014ecb55fcf3bfdb2e4596ddbc8b20" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>PR::ParticleReader::ParticleReader</definition>
-        <argsstring>()</argsstring>
-        <name>ParticleReader</name>
-        <qualifiedname>PR::ParticleReader::ParticleReader</qualifiedname>
-        <briefdescription>
-<para>Constructor: check for and set up MPI. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="42" column="5" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="42" bodyend="55"/>
-        <references refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" compoundref="_particle_reader_8_h" startline="36">myid</references>
-        <references refid="class_p_r_1_1_particle_reader_1abeb9841e4af7a88c1cf1293c7d59dfd7" compoundref="_particle_reader_8_h" startline="36">numprocs</references>
-        <references refid="class_p_r_1_1_particle_reader_1a321c230acfa8d63e36166e2789cb001a" compoundref="_particle_reader_8_h" startline="37">use_mpi</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_particle_reader_1ab23fba530a517ea46bd6f68fa46c659c" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PR::ParticleReader::PrintSummary</definition>
-        <argsstring>(std::ostream &amp;out, bool stats=false, bool timeonly=false)</argsstring>
-        <name>PrintSummary</name>
-        <qualifiedname>PR::ParticleReader::PrintSummary</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>stats</declname>
-          <defval>false</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>timeonly</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Print summary phase-space info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="79" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_particle_reader_1a63c8f579270234489399e7e920ee59bd" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void PR::ParticleReader::SelectType</definition>
-        <argsstring>(const std::string &amp;type)=0</argsstring>
-        <name>SelectType</name>
-        <qualifiedname>PR::ParticleReader::SelectType</qualifiedname>
-        <reimplementedby refid="class_p_r_1_1_p_s_p_1a3c5ed37a3c7a2311f368f287a36cbfcc">SelectType</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_gadget_native_1aea9565e7a8acc89cc3c327a542fff04e">SelectType</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_gadget_h_d_f5_1a57edc697f801746ef7dd0e02c705ab9c">SelectType</reimplementedby>
-        <reimplementedby refid="class_p_r_1_1_tipsy_1a00ef302e96bd8bad1103ae5446295290">SelectType</reimplementedby>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>type</declname>
-        </param>
-        <briefdescription>
-<para>Select a particular particle type and reset the iterator. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="61" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_particle_reader_1a44664d520e38091ae61b53340fe9ec3e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual PR::ParticleReader::~ParticleReader</definition>
-        <argsstring>()</argsstring>
-        <name>~ParticleReader</name>
-        <qualifiedname>PR::ParticleReader::~ParticleReader</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="58" column="13" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="58" bodyend="58"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-func">
-      <memberdef kind="function" id="class_p_r_1_1_particle_reader_1a0965aecd1dbd2f6fbd1cfb868f9e4723" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::shared_ptr&lt; <ref refid="class_p_r_1_1_particle_reader" kindref="compound">ParticleReader</ref> &gt;</type>
-        <definition>static std::shared_ptr&lt; ParticleReader &gt; PR::ParticleReader::createReader</definition>
-        <argsstring>(const std::string &amp;type, const std::vector&lt; std::string &gt; &amp;file, int myid=0, bool verbose=false)</argsstring>
-        <name>createReader</name>
-        <qualifiedname>PR::ParticleReader::createReader</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>type</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; std::string &gt; &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>myid</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Create a shared pointer to derived instance of the desired type and return it. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="91" column="5"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_particle_reader_1af5d10d72983a64c933650656ab8e616c" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::vector&lt; std::vector&lt; std::string &gt; &gt;</type>
-        <definition>static std::vector&lt; std::vector&lt; std::string &gt; &gt; PR::ParticleReader::parseFileList</definition>
-        <argsstring>(const std::string &amp;file, const std::string &amp;delimit)</argsstring>
-        <name>parseFileList</name>
-        <qualifiedname>PR::ParticleReader::parseFileList</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>delimit</declname>
-        </param>
-        <briefdescription>
-<para>Order file list into batches at single times from file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="83" column="5"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_r_1_1_particle_reader_1a7ae979e31716b0cdf44f6da87f11d853" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::vector&lt; std::vector&lt; std::string &gt; &gt;</type>
-        <definition>static std::vector&lt; std::vector&lt; std::string &gt; &gt; PR::ParticleReader::parseStringList</definition>
-        <argsstring>(const std::vector&lt; std::string &gt; &amp;file, const std::string &amp;delimit)</argsstring>
-        <name>parseStringList</name>
-        <qualifiedname>PR::ParticleReader::parseStringList</qualifiedname>
-        <param>
-          <type>const std::vector&lt; std::string &gt; &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>delimit</declname>
-        </param>
-        <briefdescription>
-<para>Order file list into batches at single times from vector of strings. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="87" column="5"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Base class for reading particle phase space from any simulation. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>PR::GadgetHDF5</label>
-        <link refid="class_p_r_1_1_gadget_h_d_f5"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PR::GadgetNative</label>
-        <link refid="class_p_r_1_1_gadget_native"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PR::PSP</label>
-        <link refid="class_p_r_1_1_p_s_p"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PR::PSPout</label>
-        <link refid="class_p_r_1_1_p_s_pout"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>PR::PSPspl</label>
-        <link refid="class_p_r_1_1_p_s_pspl"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>PR::ParticleReader</label>
-        <link refid="class_p_r_1_1_particle_reader"/>
-      </node>
-      <node id="7">
-        <label>PR::Tipsy</label>
-        <link refid="class_p_r_1_1_tipsy"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="31" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="32" bodyend="93"/>
-    <listofallmembers>
-      <member refid="class_p_r_1_1_particle_reader_1a0965aecd1dbd2f6fbd1cfb868f9e4723" prot="public" virt="non-virtual"><scope>PR::ParticleReader</scope><name>createReader</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1ad07059133f265c81866db1aad2026cdf" prot="public" virt="pure-virtual"><scope>PR::ParticleReader</scope><name>CurrentNumber</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a10927485f5e04ee75096e70b52dca6a9" prot="public" virt="pure-virtual"><scope>PR::ParticleReader</scope><name>CurrentTime</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a8b50438acca8230e8eb45a91781b9152" prot="public" virt="pure-virtual"><scope>PR::ParticleReader</scope><name>firstParticle</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1aaa7bdf2a176d8446e6229fd03256ab58" prot="public" virt="pure-virtual"><scope>PR::ParticleReader</scope><name>GetTypes</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a30a2c6bf1215b5a1898f610d66e2f597" prot="protected" virt="non-virtual"><scope>PR::ParticleReader</scope><name>myid</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a5768007e1583c7c59031fd611c699768" prot="public" virt="pure-virtual"><scope>PR::ParticleReader</scope><name>nextParticle</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1abeb9841e4af7a88c1cf1293c7d59dfd7" prot="protected" virt="non-virtual"><scope>PR::ParticleReader</scope><name>numprocs</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1af5d10d72983a64c933650656ab8e616c" prot="public" virt="non-virtual"><scope>PR::ParticleReader</scope><name>parseFileList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a7ae979e31716b0cdf44f6da87f11d853" prot="public" virt="non-virtual"><scope>PR::ParticleReader</scope><name>parseStringList</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1aff014ecb55fcf3bfdb2e4596ddbc8b20" prot="public" virt="non-virtual"><scope>PR::ParticleReader</scope><name>ParticleReader</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1ab23fba530a517ea46bd6f68fa46c659c" prot="public" virt="virtual"><scope>PR::ParticleReader</scope><name>PrintSummary</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a6d0293092f653021b87b779bb2d20bc2" prot="protected" virt="non-virtual"><scope>PR::ParticleReader</scope><name>readerTypes</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a63c8f579270234489399e7e920ee59bd" prot="public" virt="pure-virtual"><scope>PR::ParticleReader</scope><name>SelectType</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a321c230acfa8d63e36166e2789cb001a" prot="protected" virt="non-virtual"><scope>PR::ParticleReader</scope><name>use_mpi</name></member>
-      <member refid="class_p_r_1_1_particle_reader_1a44664d520e38091ae61b53340fe9ec3e" prot="public" virt="virtual"><scope>PR::ParticleReader</scope><name>~ParticleReader</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_p_r_1_1_tipsy.xml b/doxyxml/class_p_r_1_1_tipsy.xml
deleted file mode 100644
index e4c8ac2..0000000
--- a/doxyxml/class_p_r_1_1_tipsy.xml
+++ /dev/null
@@ -1,552 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_r_1_1_tipsy" kind="class" language="C++" prot="public">
-    <compoundname>PR::Tipsy</compoundname>
-    <basecompoundref refid="class_p_r_1_1_particle_reader" prot="public" virt="non-virtual">PR::ParticleReader</basecompoundref>
-    <includes refid="_particle_reader_8_h" local="no">ParticleReader.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="enum" id="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" prot="public" static="no" strong="yes">
-        <type></type>
-        <name>TipsyType</name>
-        <qualifiedname>PR::Tipsy::TipsyType</qualifiedname>
-        <enumvalue id="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9a8e5f3adee38c8fccc13c1f3be0143796" prot="public">
-          <name>native</name>
-          <briefdescription>
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-          <detaileddescription>
-          </detaileddescription>
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-        <enumvalue id="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9a05e46a892c9f038a22dddb6b2877477c" prot="public">
-          <name>xdr</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9a90155b2515ab6ecfbb2275c03a47472a" prot="public">
-          <name>bonsai</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
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-        <briefdescription>
-        </briefdescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="485" column="5" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="485" bodyend="485"/>
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-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1a196f9443ea19812440e858c6b76c1461" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::string &gt;::iterator</type>
-        <definition>std::vector&lt;std::string&gt;::iterator PR::Tipsy::curfile</definition>
-        <argsstring></argsstring>
-        <name>curfile</name>
-        <qualifiedname>PR::Tipsy::curfile</qualifiedname>
-        <briefdescription>
-<para>Current file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="492" column="28" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="492" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1ac8211969e32fde3fd5ac6e2c76ecb560" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string PR::Tipsy::curName</definition>
-        <argsstring></argsstring>
-        <name>curName</name>
-        <qualifiedname>PR::Tipsy::curName</qualifiedname>
-        <briefdescription>
-<para>Current name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="504" column="17" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="504" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1a781177372bc346ee137b101da29213e8" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::string &gt;</type>
-        <definition>std::vector&lt;std::string&gt; PR::Tipsy::curTypes</definition>
-        <argsstring></argsstring>
-        <name>curTypes</name>
-        <qualifiedname>PR::Tipsy::curTypes</qualifiedname>
-        <briefdescription>
-<para>Current types. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="501" column="17" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="501" bodyend="-1"/>
-        <referencedby refid="class_p_r_1_1_tipsy_1ae9180a2edcf20c6902e4fd2bb9cc5f9f" compoundref="_particle_reader_8_h" startline="540" endline="540">GetTypes</referencedby>
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-        <type>std::vector&lt; std::string &gt;</type>
-        <definition>std::vector&lt;std::string&gt; PR::Tipsy::files</definition>
-        <argsstring></argsstring>
-        <name>files</name>
-        <qualifiedname>PR::Tipsy::files</qualifiedname>
-        <briefdescription>
-<para>List of files. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="489" column="17" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="489" bodyend="-1"/>
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-        <type>unsigned long</type>
-        <definition>unsigned long PR::Tipsy::Ndark</definition>
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-        <name>Ndark</name>
-        <qualifiedname>PR::Tipsy::Ndark</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="507" column="24" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="507" bodyend="-1"/>
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-        <type>unsigned long</type>
-        <definition>unsigned long PR::Tipsy::Ngas</definition>
-        <argsstring></argsstring>
-        <name>Ngas</name>
-        <qualifiedname>PR::Tipsy::Ngas</qualifiedname>
-        <briefdescription>
-<para>Totals. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="507" column="19" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="507" bodyend="-1"/>
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-        <type>unsigned long</type>
-        <definition>unsigned long PR::Tipsy::Nstar</definition>
-        <argsstring></argsstring>
-        <name>Nstar</name>
-        <qualifiedname>PR::Tipsy::Nstar</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="507" column="30" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="507" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1a98a9f8ee827371e340f26e45a98fd790" prot="private" static="no" mutable="no">
-        <type><ref refid="class_particle" kindref="compound">Particle</ref></type>
-        <definition>Particle PR::Tipsy::P</definition>
-        <argsstring></argsstring>
-        <name>P</name>
-        <qualifiedname>PR::Tipsy::P</qualifiedname>
-        <briefdescription>
-<para>Temporary for packing array. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="498" column="14" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="498" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1a2d39f6045070a3c0f492c19932d97dfd" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_tipsy_reader_1_1_tipsy_file" kindref="compound">TipsyReader::TipsyFile</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;TipsyReader::TipsyFile&gt; PR::Tipsy::ps</definition>
-        <argsstring></argsstring>
-        <name>ps</name>
-        <qualifiedname>PR::Tipsy::ps</qualifiedname>
-        <briefdescription>
-<para>Pointer to <ref refid="class_p_r_1_1_tipsy" kindref="compound">Tipsy</ref> particle structures. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="495" column="21" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="495" bodyend="-1"/>
-        <referencedby refid="class_p_r_1_1_tipsy_1a2a30817723dd66082d7c53385f2160e0" compoundref="_particle_reader_8_h" startline="549" endline="549">CurrentTime</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1a919d7144ab6e008ef75f604b339cd569" prot="private" static="no" mutable="no">
-        <type><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" kindref="member">TipsyType</ref></type>
-        <definition>TipsyType PR::Tipsy::ttype</definition>
-        <argsstring></argsstring>
-        <name>ttype</name>
-        <qualifiedname>PR::Tipsy::ttype</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_p_r_1_1_tipsy" kindref="compound">Tipsy</ref> file type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="510" column="15" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="510" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1a90f3dd570086ac3194d23b75c4c7a3e1" prot="protected" static="yes" mutable="no">
-        <type>std::unordered_map&lt; std::string, int &gt;</type>
-        <definition>std::unordered_map&lt;std::string, int&gt; PR::Tipsy::findP</definition>
-        <argsstring></argsstring>
-        <name>findP</name>
-        <qualifiedname>PR::Tipsy::findP</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="515" column="31" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="515" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1a8704c791527d7a01c4dbea7d27a07f15" prot="protected" static="yes" mutable="no">
-        <type>std::vector&lt; std::string &gt;</type>
-        <definition>std::vector&lt;std::string&gt; PR::Tipsy::Ptypes</definition>
-        <argsstring></argsstring>
-        <name>Ptypes</name>
-        <qualifiedname>PR::Tipsy::Ptypes</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="514" column="24" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="514" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_p_r_1_1_tipsy_1a86eb068baf2da718ef595e81d9081965" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned PR::Tipsy::pcount</definition>
-        <argsstring></argsstring>
-        <name>pcount</name>
-        <qualifiedname>PR::Tipsy::pcount</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="518" column="14" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="518" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int PR::Tipsy::ptype</definition>
-        <argsstring></argsstring>
-        <name>ptype</name>
-        <qualifiedname>PR::Tipsy::ptype</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="516" column="9" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="516" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void PR::Tipsy::getNumbers</definition>
-        <argsstring>()</argsstring>
-        <name>getNumbers</name>
-        <qualifiedname>PR::Tipsy::getNumbers</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="520" column="10"/>
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-        <type>bool</type>
-        <definition>bool PR::Tipsy::nextFile</definition>
-        <argsstring>()</argsstring>
-        <name>nextFile</name>
-        <qualifiedname>PR::Tipsy::nextFile</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="522" column="10"/>
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-        <type>void</type>
-        <definition>void PR::Tipsy::packParticle</definition>
-        <argsstring>()</argsstring>
-        <name>packParticle</name>
-        <qualifiedname>PR::Tipsy::packParticle</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="521" column="10"/>
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-      <memberdef kind="function" id="class_p_r_1_1_tipsy_1ad92eead4b9155d00ae2707bda0e2f850" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>unsigned long</type>
-        <definition>virtual unsigned long PR::Tipsy::CurrentNumber</definition>
-        <argsstring>()</argsstring>
-        <name>CurrentNumber</name>
-        <qualifiedname>PR::Tipsy::CurrentNumber</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1ad07059133f265c81866db1aad2026cdf">CurrentNumber</reimplements>
-        <briefdescription>
-<para>Number of particles in the chosen type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="546" column="27"/>
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-      <memberdef kind="function" id="class_p_r_1_1_tipsy_1a2a30817723dd66082d7c53385f2160e0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double PR::Tipsy::CurrentTime</definition>
-        <argsstring>()</argsstring>
-        <name>CurrentTime</name>
-        <qualifiedname>PR::Tipsy::CurrentTime</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1a10927485f5e04ee75096e70b52dca6a9">CurrentTime</reimplements>
-        <briefdescription>
-<para>Get current time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="549" column="20" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="549" bodyend="549"/>
-        <references refid="class_p_r_1_1_tipsy_1a2d39f6045070a3c0f492c19932d97dfd" compoundref="_particle_reader_8_h" startline="495">ps</references>
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-        <type>const <ref refid="class_particle" kindref="compound">Particle</ref> *</type>
-        <definition>virtual const Particle * PR::Tipsy::firstParticle</definition>
-        <argsstring>()</argsstring>
-        <name>firstParticle</name>
-        <qualifiedname>PR::Tipsy::firstParticle</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1a8b50438acca8230e8eb45a91781b9152">firstParticle</reimplements>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> access. </para>
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-        <detaileddescription>
-        </detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="553" column="28"/>
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-        <type>std::vector&lt; std::string &gt;</type>
-        <definition>virtual std::vector&lt; std::string &gt; PR::Tipsy::GetTypes</definition>
-        <argsstring>()</argsstring>
-        <name>GetTypes</name>
-        <qualifiedname>PR::Tipsy::GetTypes</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1aaa7bdf2a176d8446e6229fd03256ab58">GetTypes</reimplements>
-        <briefdescription>
-<para>Return list of particle types. </para>
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-        </inbodydescription>
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-        <references refid="class_p_r_1_1_tipsy_1a781177372bc346ee137b101da29213e8" compoundref="_particle_reader_8_h" startline="501">curTypes</references>
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-        <type>const <ref refid="class_particle" kindref="compound">Particle</ref> *</type>
-        <definition>virtual const Particle * PR::Tipsy::nextParticle</definition>
-        <argsstring>()</argsstring>
-        <name>nextParticle</name>
-        <qualifiedname>PR::Tipsy::nextParticle</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1a5768007e1583c7c59031fd611c699768">nextParticle</reimplements>
-        <briefdescription>
-<para>Get the next particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="554" column="28"/>
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-        <type>void</type>
-        <definition>virtual void PR::Tipsy::SelectType</definition>
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-        <name>SelectType</name>
-        <qualifiedname>PR::Tipsy::SelectType</qualifiedname>
-        <reimplements refid="class_p_r_1_1_particle_reader_1a63c8f579270234489399e7e920ee59bd">SelectType</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>type</declname>
-        </param>
-        <briefdescription>
-<para>Select a particular particle type and reset the iterator. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="543" column="18"/>
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-        <type></type>
-        <definition>PR::Tipsy::Tipsy</definition>
-        <argsstring>(const std::string &amp;file, TipsyType type=TipsyType::native, bool verbose=false)</argsstring>
-        <name>Tipsy</name>
-        <qualifiedname>PR::Tipsy::Tipsy</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" kindref="member">TipsyType</ref></type>
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-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Single-file constructor. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type></type>
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-        <name>Tipsy</name>
-        <qualifiedname>PR::Tipsy::Tipsy</qualifiedname>
-        <param>
-          <type>const std::vector&lt; std::string &gt; &amp;</type>
-          <declname>file</declname>
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-        <param>
-          <type><ref refid="class_p_r_1_1_tipsy_1a9c0347dad5187f34ebe2ae9fc91178d9" kindref="member">TipsyType</ref></type>
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-          <type>bool</type>
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-          <defval>false</defval>
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-        <briefdescription>
-<para>Constructor. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="532" column="5"/>
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-        <type></type>
-        <definition>virtual PR::Tipsy::~Tipsy</definition>
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-        <name>~Tipsy</name>
-        <qualifiedname>PR::Tipsy::~Tipsy</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-    </briefdescription>
-    <detaileddescription>
-<para>Class to access a <ref refid="class_p_r_1_1_tipsy" kindref="compound">Tipsy</ref> file </para>
-    </detaileddescription>
-    <inheritancegraph>
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-        <label>PR::ParticleReader</label>
-        <link refid="class_p_r_1_1_particle_reader"/>
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-      <node id="1">
-        <label>PR::Tipsy</label>
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-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
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-        <label>PR::ParticleReader</label>
-        <link refid="class_p_r_1_1_particle_reader"/>
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-        <label>PR::Tipsy</label>
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-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>P</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Particle</label>
-        <link refid="class_particle"/>
-      </node>
-    </collaborationgraph>
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-    <listofallmembers>
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diff --git a/doxyxml/class_p_s_p.xml b/doxyxml/class_p_s_p.xml
deleted file mode 100644
index 897f16c..0000000
--- a/doxyxml/class_p_s_p.xml
+++ /dev/null
@@ -1,1150 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_s_p" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>PSP</compoundname>
-    <derivedcompoundref refid="class_p_s_pout" prot="public" virt="non-virtual">PSPout</derivedcompoundref>
-    <derivedcompoundref refid="class_p_s_pout" prot="public" virt="non-virtual">PSPout</derivedcompoundref>
-    <derivedcompoundref refid="class_p_s_pspl" prot="public" virt="non-virtual">PSPspl</derivedcompoundref>
-    <derivedcompoundref refid="class_p_s_pspl" prot="public" virt="non-virtual">PSPspl</derivedcompoundref>
-    <includes refid="_p_s_p2_8_h" local="no">PSP2.H</includes>
-    <sectiondef kind="protected-static-attrib">
-      <memberdef kind="variable" id="class_p_s_p_1a5de18018153d3ebc6878483423c39cc6" prot="protected" static="yes" mutable="no">
-        <type>const unsigned long</type>
-        <definition>static const unsigned long PSP::magic</definition>
-        <argsstring></argsstring>
-        <name>magic</name>
-        <qualifiedname>PSP::magic</qualifiedname>
-        <initializer>= 0xadbfabc0</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="229" column="30" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="229" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_s_p_1aa420e0d35ceaa543236b116a3509cd24" prot="protected" static="yes" mutable="no">
-        <type>const unsigned long</type>
-        <definition>static const unsigned long PSP::mmask</definition>
-        <argsstring></argsstring>
-        <name>mmask</name>
-        <qualifiedname>PSP::mmask</qualifiedname>
-        <initializer>= 0xf</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="230" column="30" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="230" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_p_s_p_1a3db2dc47d3c7e19eee39f44f82bb69c4" prot="protected" static="yes" mutable="no">
-        <type>const unsigned long</type>
-        <definition>static const unsigned long PSP::nmask</definition>
-        <argsstring></argsstring>
-        <name>nmask</name>
-        <qualifiedname>PSP::nmask</qualifiedname>
-        <initializer>= ~<ref refid="class_p_s_p_1aa420e0d35ceaa543236b116a3509cd24" kindref="member">mmask</ref></initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="231" column="30" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="231" bodyend="-1"/>
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-        <type><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>PSPstanza * PSP::cur</definition>
-        <argsstring></argsstring>
-        <name>cur</name>
-        <qualifiedname>PSP::cur</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="239" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="239" bodyend="-1"/>
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-        <type><ref refid="class_master_header" kindref="compound">MasterHeader</ref></type>
-        <definition>MasterHeader PSP::header</definition>
-        <argsstring></argsstring>
-        <name>header</name>
-        <qualifiedname>PSP::header</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <type>std::ifstream</type>
-        <definition>std::ifstream PSP::in</definition>
-        <argsstring></argsstring>
-        <name>in</name>
-        <qualifiedname>PSP::in</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <definition>float PSP::mtot</definition>
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-        <name>mtot</name>
-        <qualifiedname>PSP::mtot</qualifiedname>
-        <briefdescription>
-<para>Temporaries for stanza statistics. </para>
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-        <name>new_dir</name>
-        <qualifiedname>PSP::new_dir</qualifiedname>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="256" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="256" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>part</name>
-        <qualifiedname>PSP::part</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <name>pcount</name>
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-        <type>std::vector&lt; float &gt;</type>
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-        <argsstring></argsstring>
-        <name>pmax</name>
-        <qualifiedname>PSP::pmax</qualifiedname>
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-        <type>std::vector&lt; float &gt;</type>
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-        <argsstring></argsstring>
-        <name>pmed</name>
-        <qualifiedname>PSP::pmed</qualifiedname>
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-        <type>std::vector&lt; float &gt;</type>
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-        <argsstring></argsstring>
-        <name>pmin</name>
-        <qualifiedname>PSP::pmin</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <argsstring></argsstring>
-        <name>spos</name>
-        <qualifiedname>PSP::spos</qualifiedname>
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-        <definition>std::list&lt;PSPstanza&gt; PSP::stanzas</definition>
-        <argsstring></argsstring>
-        <name>stanzas</name>
-        <qualifiedname>PSP::stanzas</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="237" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="237" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_s_p_1ac41847620427c5c925c3785406ee1219" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool PSP::VERBOSE</definition>
-        <argsstring></argsstring>
-        <name>VERBOSE</name>
-        <qualifiedname>PSP::VERBOSE</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="235" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="235" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_s_p_1adefeff8d008510d290fe86861a15f966" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; float &gt;</type>
-        <definition>std::vector&lt; float &gt; PSP::vmax</definition>
-        <argsstring></argsstring>
-        <name>vmax</name>
-        <qualifiedname>PSP::vmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="249" column="25" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="249" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_s_p_1a912a4ecef2f5011e96c7f837ff18d6c2" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; float &gt;</type>
-        <definition>std::vector&lt; float &gt; PSP::vmed</definition>
-        <argsstring></argsstring>
-        <name>vmed</name>
-        <qualifiedname>PSP::vmed</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="249" column="20" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="249" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_s_p_1a07e18a1a45d705e9e82360dd8abd093b" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; float &gt;</type>
-        <definition>std::vector&lt; float &gt; PSP::vmin</definition>
-        <argsstring></argsstring>
-        <name>vmin</name>
-        <qualifiedname>PSP::vmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="249" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="249" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-func">
-      <memberdef kind="function" id="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::check_dirname</definition>
-        <argsstring>()</argsstring>
-        <name>check_dirname</name>
-        <qualifiedname>PSP::check_dirname</qualifiedname>
-        <briefdescription>
-<para>Append &apos;/&apos; if necessary. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="255" column="8"/>
-        <referencedby refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" compoundref="_p_s_p2_8_h" startline="271" endline="272">PSP</referencedby>
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-      <memberdef kind="function" id="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::check_dirname</definition>
-        <argsstring>()</argsstring>
-        <name>check_dirname</name>
-        <qualifiedname>PSP::check_dirname</qualifiedname>
-        <briefdescription>
-<para>Append &apos;/&apos; if necessary. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="255" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::ComputeStats</definition>
-        <argsstring>()</argsstring>
-        <name>ComputeStats</name>
-        <qualifiedname>PSP::ComputeStats</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="250" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::ComputeStats</definition>
-        <argsstring>()</argsstring>
-        <name>ComputeStats</name>
-        <qualifiedname>PSP::ComputeStats</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="250" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::init</definition>
-        <argsstring>()</argsstring>
-        <name>init</name>
-        <qualifiedname>PSP::init</qualifiedname>
-        <briefdescription>
-<para>Stream init. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="259" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="259" bodyend="263"/>
-        <references refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" compoundref="_p_s_p2_8_h" startline="244">in</references>
-        <referencedby refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" compoundref="_p_s_p2_8_h" startline="268" endline="268">PSP</referencedby>
-        <referencedby refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" compoundref="_p_s_p2_8_h" startline="271" endline="272">PSP</referencedby>
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-      <memberdef kind="function" id="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::init</definition>
-        <argsstring>()</argsstring>
-        <name>init</name>
-        <qualifiedname>PSP::init</qualifiedname>
-        <briefdescription>
-<para>Stream init. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="259" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="259" bodyend="263"/>
-        <references refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" compoundref="_p_s_p2_8_h" startline="244">in</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1a3b5328f0e732e5fd4e60339c7e81aa44" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::write_binary</definition>
-        <argsstring>(std::ostream &amp;out, list&lt; PSPstanza &gt;::iterator its, bool real4)</argsstring>
-        <name>write_binary</name>
-        <qualifiedname>PSP::write_binary</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>list&lt; <ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> &gt;::iterator</type>
-          <declname>its</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="251" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1af76c58f257d5dcf8461886c7fde94342" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::write_binary</definition>
-        <argsstring>(std::ostream &amp;out, std::list&lt; PSPstanza &gt;::iterator its, bool real4)</argsstring>
-        <name>write_binary</name>
-        <qualifiedname>PSP::write_binary</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>std::list&lt; <ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> &gt;::iterator</type>
-          <declname>its</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="251" column="8"/>
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-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSP::begin</definition>
-        <argsstring>()</argsstring>
-        <name>begin</name>
-        <qualifiedname>PSP::begin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Define necessary member functions to be a valid container iterator </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="310" column="21" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="310" bodyend="310"/>
-        <references refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863">GetParticle</references>
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-      <memberdef kind="function" id="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double PSP::CurrentTime</definition>
-        <argsstring>()</argsstring>
-        <name>CurrentTime</name>
-        <qualifiedname>PSP::CurrentTime</qualifiedname>
-        <briefdescription>
-<para>Get snapshot time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="278" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="278" bodyend="278"/>
-        <references refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" compoundref="_p_s_p2_8_h" startline="233">header</references>
-        <references refid="class_master_header_1a57c58e93be3ab14b4e3595078eb0a0be" compoundref="header_8_h" startline="17">MasterHeader::time</references>
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-      <memberdef kind="function" id="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double PSP::CurrentTime</definition>
-        <argsstring>()</argsstring>
-        <name>CurrentTime</name>
-        <qualifiedname>PSP::CurrentTime</qualifiedname>
-        <briefdescription>
-<para>Get snapshot time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="278" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="278" bodyend="278"/>
-        <references refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" compoundref="_p_s_p2_8_h" startline="233">header</references>
-        <references refid="class_master_header_1a57c58e93be3ab14b4e3595078eb0a0be" compoundref="header_8_h" startline="17">MasterHeader::time</references>
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-      <memberdef kind="function" id="class_p_s_p_1a75ffb3e202683386b7b9646afb349213" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSP::end</definition>
-        <argsstring>()</argsstring>
-        <name>end</name>
-        <qualifiedname>PSP::end</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="311" column="21" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="311" bodyend="311"/>
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-      <memberdef kind="function" id="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>virtual PSPstanza * PSP::GetNamed</definition>
-        <argsstring>(const std::string &amp;name)</argsstring>
-        <name>GetNamed</name>
-        <qualifiedname>PSP::GetNamed</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Set stanza to name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="284" column="21" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="284" bodyend="293"/>
-        <references refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" compoundref="_p_s_p2_8_h" startline="239">cur</references>
-        <references refid="class_p_s_pstanza_1af7488c06bf74a6cd75d0f905913d667d" compoundref="_p_s_p2_8_h" startline="23">PSPstanza::name</references>
-        <references refid="class_p_s_p_1a7bad6b96c2370bc3bb7abf3cd37f7de4" compoundref="_p_s_p2_8_h" startline="238">spos</references>
-        <references refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" compoundref="_p_s_p2_8_h" startline="237">stanzas</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>virtual PSPstanza * PSP::GetNamed</definition>
-        <argsstring>(const std::string &amp;name)</argsstring>
-        <name>GetNamed</name>
-        <qualifiedname>PSP::GetNamed</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Set stanza to name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="284" column="21" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="284" bodyend="293"/>
-        <references refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" compoundref="_p_s_p2_8_h" startline="239">cur</references>
-        <references refid="class_p_s_pstanza_1af7488c06bf74a6cd75d0f905913d667d" compoundref="_p_s_p2_8_h" startline="23">PSPstanza::name</references>
-        <references refid="class_p_s_p_1a7bad6b96c2370bc3bb7abf3cd37f7de4" compoundref="_p_s_p2_8_h" startline="238">spos</references>
-        <references refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" compoundref="_p_s_p2_8_h" startline="237">stanzas</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSP::GetParticle</definition>
-        <argsstring>()=0</argsstring>
-        <name>GetParticle</name>
-        <qualifiedname>PSP::GetParticle</qualifiedname>
-        <reimplementedby refid="class_p_s_pout_1a315c5defe2068ac25a9e634e2c0406f1">GetParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pspl_1a5fba477a148cda6c52d37a9c020a7dbb">GetParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pout_1a315c5defe2068ac25a9e634e2c0406f1">GetParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pspl_1a5fba477a148cda6c52d37a9c020a7dbb">GetParticle</reimplementedby>
-        <briefdescription>
-<para>Reset to beginning of particles for this component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="302" column="21"/>
-        <referencedby refid="class_p_s_p_1a2aafae2e71f5d928a3a2c9075ebfd72f" compoundref="_p_s_p_8_h" startline="310" endline="310">begin</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSP::GetParticle</definition>
-        <argsstring>()=0</argsstring>
-        <name>GetParticle</name>
-        <qualifiedname>PSP::GetParticle</qualifiedname>
-        <reimplementedby refid="class_p_s_pout_1a315c5defe2068ac25a9e634e2c0406f1">GetParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pspl_1a5fba477a148cda6c52d37a9c020a7dbb">GetParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pout_1a315c5defe2068ac25a9e634e2c0406f1">GetParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pspl_1a5fba477a148cda6c52d37a9c020a7dbb">GetParticle</reimplementedby>
-        <briefdescription>
-<para>Reset to beginning of particles for this component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="302" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>virtual PSPstanza * PSP::GetStanza</definition>
-        <argsstring>()</argsstring>
-        <name>GetStanza</name>
-        <qualifiedname>PSP::GetStanza</qualifiedname>
-        <briefdescription>
-<para>Reset to beginning of stanza list and return null if no stanzas. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="296" column="21"/>
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-      <memberdef kind="function" id="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>virtual PSPstanza * PSP::GetStanza</definition>
-        <argsstring>()</argsstring>
-        <name>GetStanza</name>
-        <qualifiedname>PSP::GetStanza</qualifiedname>
-        <briefdescription>
-<para>Reset to beginning of stanza list and return null if no stanzas. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSP::NextParticle</definition>
-        <argsstring>()=0</argsstring>
-        <name>NextParticle</name>
-        <qualifiedname>PSP::NextParticle</qualifiedname>
-        <reimplementedby refid="class_p_s_pout_1ad4f298bce6c3c72e5963c5751c427916">NextParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pspl_1a4f8bca666da7b2e5565964538ddaa886">NextParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pout_1ad4f298bce6c3c72e5963c5751c427916">NextParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pspl_1a4f8bca666da7b2e5565964538ddaa886">NextParticle</reimplementedby>
-        <briefdescription>
-<para>Get next particle and return null at end. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="305" column="21"/>
-        <referencedby refid="class_p_s_p_1a5be729fe6610014a5300aed5bdd6c97e" compoundref="_p_s_p_8_h" startline="312" endline="312">operator++</referencedby>
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-      <memberdef kind="function" id="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSP::NextParticle</definition>
-        <argsstring>()=0</argsstring>
-        <name>NextParticle</name>
-        <qualifiedname>PSP::NextParticle</qualifiedname>
-        <reimplementedby refid="class_p_s_pout_1ad4f298bce6c3c72e5963c5751c427916">NextParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pspl_1a4f8bca666da7b2e5565964538ddaa886">NextParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pout_1ad4f298bce6c3c72e5963c5751c427916">NextParticle</reimplementedby>
-        <reimplementedby refid="class_p_s_pspl_1a4f8bca666da7b2e5565964538ddaa886">NextParticle</reimplementedby>
-        <briefdescription>
-<para>Get next particle and return null at end. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="305" column="21"/>
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-      <memberdef kind="function" id="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>virtual PSPstanza * PSP::NextStanza</definition>
-        <argsstring>()</argsstring>
-        <name>NextStanza</name>
-        <qualifiedname>PSP::NextStanza</qualifiedname>
-        <briefdescription>
-<para>Get next stanza in list and return null at end;. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="299" column="21"/>
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-      <memberdef kind="function" id="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_p_s_pstanza" kindref="compound">PSPstanza</ref> *</type>
-        <definition>virtual PSPstanza * PSP::NextStanza</definition>
-        <argsstring>()</argsstring>
-        <name>NextStanza</name>
-        <qualifiedname>PSP::NextStanza</qualifiedname>
-        <briefdescription>
-<para>Get next stanza in list and return null at end;. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="299" column="21"/>
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-      <memberdef kind="function" id="class_p_s_p_1a5ea1bb15edde30f2976ad9887d6ed3d1" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>bool</type>
-        <definition>virtual bool PSP::operator!=</definition>
-        <argsstring>(SParticle *const &amp;other)</argsstring>
-        <name>operator!=</name>
-        <qualifiedname>PSP::operator!=</qualifiedname>
-        <param>
-          <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *const &amp;</type>
-          <declname>other</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="315" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="315" bodyend="316"/>
-        <references refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" compoundref="_p_s_p2_8_h" startline="241">part</references>
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-      <memberdef kind="function" id="class_p_s_p_1a5be729fe6610014a5300aed5bdd6c97e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSP::operator++</definition>
-        <argsstring>()</argsstring>
-        <name>operator++</name>
-        <qualifiedname>PSP::operator++</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="312" column="21" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="312" bodyend="312"/>
-        <references refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8">NextParticle</references>
-        <references refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" compoundref="_p_s_p2_8_h" startline="241">part</references>
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-      <memberdef kind="function" id="class_p_s_p_1a3becaa90556a364f94574e3f0cdbc8e3" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>bool</type>
-        <definition>virtual bool PSP::operator==</definition>
-        <argsstring>(SParticle *const &amp;other)</argsstring>
-        <name>operator==</name>
-        <qualifiedname>PSP::operator==</qualifiedname>
-        <param>
-          <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *const &amp;</type>
-          <declname>other</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="313" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="313" bodyend="314"/>
-        <references refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" compoundref="_p_s_p2_8_h" startline="241">part</references>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_p_1a0d40b61dd7404d13d8d14ea8cdf15de3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::PrintSummary</definition>
-        <argsstring>(ostream &amp;out, bool stats=false, bool timeonly=false)</argsstring>
-        <name>PrintSummary</name>
-        <qualifiedname>PSP::PrintSummary</qualifiedname>
-        <param>
-          <type>ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>stats</declname>
-          <defval>false</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>timeonly</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Print summary phase-space info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="281" column="10"/>
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-      <memberdef kind="function" id="class_p_s_p_1a6b3a0cb0a82c573c806361375ad75ab8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSP::PrintSummary</definition>
-        <argsstring>(std::ostream &amp;out, bool stats=false, bool timeonly=false)</argsstring>
-        <name>PrintSummary</name>
-        <qualifiedname>PSP::PrintSummary</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>stats</declname>
-          <defval>false</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>timeonly</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Print summary phase-space info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="281" column="10"/>
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-        <type></type>
-        <definition>PSP::PSP</definition>
-        <argsstring>(bool verbose)</argsstring>
-        <name>PSP</name>
-        <qualifiedname>PSP::PSP</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
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-        <briefdescription>
-<para>Default constructor. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="268" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="268" bodyend="268"/>
-        <references refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" compoundref="_p_s_p2_8_h" startline="259" endline="263">init</references>
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-        <type></type>
-        <definition>PSP::PSP</definition>
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-        <name>PSP</name>
-        <qualifiedname>PSP::PSP</qualifiedname>
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-          <type>bool</type>
-          <declname>verbose</declname>
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-        <briefdescription>
-<para>Default constructor. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="268" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="268" bodyend="268"/>
-        <references refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" compoundref="_p_s_p2_8_h" startline="259" endline="263">init</references>
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-        <type></type>
-        <definition>PSP::PSP</definition>
-        <argsstring>(bool verbose, std::string new_dir)</argsstring>
-        <name>PSP</name>
-        <qualifiedname>PSP::PSP</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
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-        <param>
-          <type>std::string</type>
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-        <briefdescription>
-<para>Constructor specifying current working data directory. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="271" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="271" bodyend="272"/>
-        <references refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71">check_dirname</references>
-        <references refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" compoundref="_p_s_p2_8_h" startline="259" endline="263">init</references>
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-        <type></type>
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-        <name>PSP</name>
-        <qualifiedname>PSP::PSP</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
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-        <param>
-          <type>std::string</type>
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-        <briefdescription>
-<para>Constructor specifying current working data directory. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="271" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="271" bodyend="272"/>
-        <references refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71">check_dirname</references>
-        <references refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" compoundref="_p_s_p2_8_h" startline="259" endline="263">init</references>
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-        <type>void</type>
-        <definition>void PSP::writePSP</definition>
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-        <name>writePSP</name>
-        <qualifiedname>PSP::writePSP</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
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-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
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-        <briefdescription>
-<para>Write a new <ref refid="class_p_s_p" kindref="compound">PSP</ref> file. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="308" column="8"/>
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-        <type>void</type>
-        <definition>void PSP::writePSP</definition>
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-        <name>writePSP</name>
-        <qualifiedname>PSP::writePSP</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
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-        <briefdescription>
-<para>Write a new <ref refid="class_p_s_p" kindref="compound">PSP</ref> file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type></type>
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-<para>Destructor. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <name>~PSP</name>
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-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="275" column="11" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="275" bodyend="275"/>
-        <references refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" compoundref="_p_s_p2_8_h" startline="244">in</references>
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-        <type>std::shared_ptr&lt; <ref refid="class_p_s_p" kindref="compound">PSP</ref> &gt;</type>
-        <definition>static std::shared_ptr&lt; PSP &gt; PSP::getPSP</definition>
-        <argsstring>(const std::string &amp;file, const std::string dir=&quot;&quot;, bool verbose=false)</argsstring>
-        <name>getPSP</name>
-        <qualifiedname>PSP::getPSP</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
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-        <param>
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-        <param>
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-          <defval>false</defval>
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-        <briefdescription>
-<para><ref refid="class_p_s_p" kindref="compound">PSP</ref> factory: choose type based on file name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-    <inheritancegraph>
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-        <label>PSP</label>
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-      <node id="2">
-        <label>PSPout</label>
-        <link refid="class_p_s_pout"/>
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-        </childnode>
-        <childnode refid="1" relation="public-inheritance">
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-      <node id="3">
-        <label>PSPspl</label>
-        <link refid="class_p_s_pspl"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
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-    <collaborationgraph>
-      <node id="4">
-        <label>ComponentHeader</label>
-        <link refid="class_component_header"/>
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-      <node id="2">
-        <label>MasterHeader</label>
-        <link refid="class_master_header"/>
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-      <node id="1">
-        <label>PSP</label>
-        <link refid="class_p_s_p"/>
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-          <edgelabel>header</edgelabel>
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-        <childnode refid="3" relation="usage">
-          <edgelabel>cur</edgelabel>
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-        <childnode refid="5" relation="usage">
-          <edgelabel>part</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PSPstanza</label>
-        <link refid="class_p_s_pstanza"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>comp</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>SParticle</label>
-        <link refid="class_s_particle"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="224" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="225" bodyend="310"/>
-    <listofallmembers>
-      <member refid="class_p_s_p_1a2aafae2e71f5d928a3a2c9075ebfd72f" prot="public" virt="virtual"><scope>PSP</scope><name>begin</name></member>
-      <member refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" prot="protected" virt="non-virtual"><scope>PSP</scope><name>check_dirname</name></member>
-      <member refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" prot="protected" virt="non-virtual"><scope>PSP</scope><name>check_dirname</name></member>
-      <member refid="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" prot="protected" virt="non-virtual"><scope>PSP</scope><name>ComputeStats</name></member>
-      <member refid="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" prot="protected" virt="non-virtual"><scope>PSP</scope><name>ComputeStats</name></member>
-      <member refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" prot="protected" virt="non-virtual"><scope>PSP</scope><name>cur</name></member>
-      <member refid="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" prot="public" virt="non-virtual"><scope>PSP</scope><name>CurrentTime</name></member>
-      <member refid="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" prot="public" virt="non-virtual"><scope>PSP</scope><name>CurrentTime</name></member>
-      <member refid="class_p_s_p_1a75ffb3e202683386b7b9646afb349213" prot="public" virt="virtual"><scope>PSP</scope><name>end</name></member>
-      <member refid="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" prot="public" virt="virtual"><scope>PSP</scope><name>GetNamed</name></member>
-      <member refid="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" prot="public" virt="virtual"><scope>PSP</scope><name>GetNamed</name></member>
-      <member refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" prot="public" virt="pure-virtual"><scope>PSP</scope><name>GetParticle</name></member>
-      <member refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863" prot="public" virt="pure-virtual"><scope>PSP</scope><name>GetParticle</name></member>
-      <member refid="class_p_s_p_1ac771aabc04e43d59c60dbf69a1970c43" prot="public" virt="non-virtual"><scope>PSP</scope><name>getPSP</name></member>
-      <member refid="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" prot="public" virt="virtual"><scope>PSP</scope><name>GetStanza</name></member>
-      <member refid="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" prot="public" virt="virtual"><scope>PSP</scope><name>GetStanza</name></member>
-      <member refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" prot="protected" virt="non-virtual"><scope>PSP</scope><name>header</name></member>
-      <member refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" prot="protected" virt="non-virtual"><scope>PSP</scope><name>in</name></member>
-      <member refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" prot="protected" virt="non-virtual"><scope>PSP</scope><name>init</name></member>
-      <member refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" prot="protected" virt="non-virtual"><scope>PSP</scope><name>init</name></member>
-      <member refid="class_p_s_p_1a5de18018153d3ebc6878483423c39cc6" prot="protected" virt="non-virtual"><scope>PSP</scope><name>magic</name></member>
-      <member refid="class_p_s_p_1aa420e0d35ceaa543236b116a3509cd24" prot="protected" virt="non-virtual"><scope>PSP</scope><name>mmask</name></member>
-      <member refid="class_p_s_p_1acf16e5ddf7cec3471faa970e98c18525" prot="protected" virt="non-virtual"><scope>PSP</scope><name>mtot</name></member>
-      <member refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" prot="protected" virt="non-virtual"><scope>PSP</scope><name>new_dir</name></member>
-      <member refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8" prot="public" virt="pure-virtual"><scope>PSP</scope><name>NextParticle</name></member>
-      <member refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8" prot="public" virt="pure-virtual"><scope>PSP</scope><name>NextParticle</name></member>
-      <member refid="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" prot="public" virt="virtual"><scope>PSP</scope><name>NextStanza</name></member>
-      <member refid="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" prot="public" virt="virtual"><scope>PSP</scope><name>NextStanza</name></member>
-      <member refid="class_p_s_p_1a3db2dc47d3c7e19eee39f44f82bb69c4" prot="protected" virt="non-virtual"><scope>PSP</scope><name>nmask</name></member>
-      <member refid="class_p_s_p_1a5ea1bb15edde30f2976ad9887d6ed3d1" prot="public" virt="virtual"><scope>PSP</scope><name>operator!=</name></member>
-      <member refid="class_p_s_p_1a5be729fe6610014a5300aed5bdd6c97e" prot="public" virt="virtual"><scope>PSP</scope><name>operator++</name></member>
-      <member refid="class_p_s_p_1a3becaa90556a364f94574e3f0cdbc8e3" prot="public" virt="virtual"><scope>PSP</scope><name>operator==</name></member>
-      <member refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" prot="protected" virt="non-virtual"><scope>PSP</scope><name>part</name></member>
-      <member refid="class_p_s_p_1ae472fd355d5a72505917b8f1a878c738" prot="protected" virt="non-virtual"><scope>PSP</scope><name>pcount</name></member>
-      <member refid="class_p_s_p_1a13ab03638eda2112ca35865c82b52934" prot="protected" virt="non-virtual"><scope>PSP</scope><name>pmax</name></member>
-      <member refid="class_p_s_p_1ac5c8a08a13b0f8d66e4dcfe63cc1d511" prot="protected" virt="non-virtual"><scope>PSP</scope><name>pmed</name></member>
-      <member refid="class_p_s_p_1a3f18fa7ed15530d6dadb0e147113e387" prot="protected" virt="non-virtual"><scope>PSP</scope><name>pmin</name></member>
-      <member refid="class_p_s_p_1a0d40b61dd7404d13d8d14ea8cdf15de3" prot="public" virt="non-virtual"><scope>PSP</scope><name>PrintSummary</name></member>
-      <member refid="class_p_s_p_1a6b3a0cb0a82c573c806361375ad75ab8" prot="public" virt="non-virtual"><scope>PSP</scope><name>PrintSummary</name></member>
-      <member refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" prot="public" virt="non-virtual"><scope>PSP</scope><name>PSP</name></member>
-      <member refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" prot="public" virt="non-virtual"><scope>PSP</scope><name>PSP</name></member>
-      <member refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" prot="public" virt="non-virtual"><scope>PSP</scope><name>PSP</name></member>
-      <member refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" prot="public" virt="non-virtual"><scope>PSP</scope><name>PSP</name></member>
-      <member refid="class_p_s_p_1a7bad6b96c2370bc3bb7abf3cd37f7de4" prot="protected" virt="non-virtual"><scope>PSP</scope><name>spos</name></member>
-      <member refid="class_p_s_p_1a305ce18ca9c87c48bacf025fbc8749b4" prot="protected" virt="non-virtual"><scope>PSP</scope><name>spos</name></member>
-      <member refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" prot="protected" virt="non-virtual"><scope>PSP</scope><name>stanzas</name></member>
-      <member refid="class_p_s_p_1a0f0f7c13568ccab0cf2aaca433e38fda" prot="protected" virt="non-virtual"><scope>PSP</scope><name>stanzas</name></member>
-      <member refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" prot="protected" virt="non-virtual"><scope>PSP</scope><name>VERBOSE</name></member>
-      <member refid="class_p_s_p_1adefeff8d008510d290fe86861a15f966" prot="protected" virt="non-virtual"><scope>PSP</scope><name>vmax</name></member>
-      <member refid="class_p_s_p_1a912a4ecef2f5011e96c7f837ff18d6c2" prot="protected" virt="non-virtual"><scope>PSP</scope><name>vmed</name></member>
-      <member refid="class_p_s_p_1a07e18a1a45d705e9e82360dd8abd093b" prot="protected" virt="non-virtual"><scope>PSP</scope><name>vmin</name></member>
-      <member refid="class_p_s_p_1a3b5328f0e732e5fd4e60339c7e81aa44" prot="protected" virt="non-virtual"><scope>PSP</scope><name>write_binary</name></member>
-      <member refid="class_p_s_p_1af76c58f257d5dcf8461886c7fde94342" prot="protected" virt="non-virtual"><scope>PSP</scope><name>write_binary</name></member>
-      <member refid="class_p_s_p_1a6faf9fda5ed3f97e1c1d497418692bb1" prot="public" virt="non-virtual"><scope>PSP</scope><name>writePSP</name></member>
-      <member refid="class_p_s_p_1a6faf9fda5ed3f97e1c1d497418692bb1" prot="public" virt="non-virtual"><scope>PSP</scope><name>writePSP</name></member>
-      <member refid="class_p_s_p_1a9af6f9e5c41c73ae19ad840d2ae97d25" prot="public" virt="virtual"><scope>PSP</scope><name>~PSP</name></member>
-      <member refid="class_p_s_p_1a9af6f9e5c41c73ae19ad840d2ae97d25" prot="public" virt="virtual"><scope>PSP</scope><name>~PSP</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_p_s_pout.xml b/doxyxml/class_p_s_pout.xml
deleted file mode 100644
index 52711a7..0000000
--- a/doxyxml/class_p_s_pout.xml
+++ /dev/null
@@ -1,308 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_s_pout" kind="class" language="C++" prot="public">
-    <compoundname>PSPout</compoundname>
-    <basecompoundref refid="class_p_s_p" prot="public" virt="non-virtual">PSP</basecompoundref>
-    <basecompoundref refid="class_p_s_p" prot="public" virt="non-virtual">PSP</basecompoundref>
-    <includes refid="_p_s_p2_8_h" local="no">PSP2.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_p_s_pout_1aaeba5015643b8dc42553170b60938ff3" prot="private" static="no" mutable="no">
-        <type>streampos</type>
-        <definition>streampos PSPout::pos</definition>
-        <argsstring></argsstring>
-        <name>pos</name>
-        <qualifiedname>PSPout::pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="320" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="320" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_s_pout_1a3c5392cc3a22649edf09b14717cc4121" prot="private" static="no" mutable="no">
-        <type>std::streampos</type>
-        <definition>std::streampos PSPout::pos</definition>
-        <argsstring></argsstring>
-        <name>pos</name>
-        <qualifiedname>PSPout::pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="336" column="18" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="336" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_p_s_pout_1a315c5defe2068ac25a9e634e2c0406f1" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSPout::GetParticle</definition>
-        <argsstring>()</argsstring>
-        <name>GetParticle</name>
-        <qualifiedname>PSPout::GetParticle</qualifiedname>
-        <reimplements refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863">GetParticle</reimplements>
-        <briefdescription>
-<para>Reset to beginning of particles for this component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="328" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pout_1a315c5defe2068ac25a9e634e2c0406f1" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSPout::GetParticle</definition>
-        <argsstring>()</argsstring>
-        <name>GetParticle</name>
-        <qualifiedname>PSPout::GetParticle</qualifiedname>
-        <reimplements refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863">GetParticle</reimplements>
-        <briefdescription>
-<para>Iterators. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="346" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pout_1ad4f298bce6c3c72e5963c5751c427916" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSPout::NextParticle</definition>
-        <argsstring>()</argsstring>
-        <name>NextParticle</name>
-        <qualifiedname>PSPout::NextParticle</qualifiedname>
-        <reimplements refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8">NextParticle</reimplements>
-        <briefdescription>
-<para>Get next particle and return null at end. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="329" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pout_1ad4f298bce6c3c72e5963c5751c427916" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSPout::NextParticle</definition>
-        <argsstring>()</argsstring>
-        <name>NextParticle</name>
-        <qualifiedname>PSPout::NextParticle</qualifiedname>
-        <reimplements refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8">NextParticle</reimplements>
-        <briefdescription>
-<para>Get next particle and return null at end. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="347" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pout_1a0659d978c49eed7f1a8b1e0c37350ede" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>PSPout::PSPout</definition>
-        <argsstring>(const std::string &amp;file, bool verbose=false)</argsstring>
-        <name>PSPout</name>
-        <qualifiedname>PSPout::PSPout</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="323" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pout_1a0659d978c49eed7f1a8b1e0c37350ede" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>PSPout::PSPout</definition>
-        <argsstring>(const std::string &amp;file, bool verbose=false)</argsstring>
-        <name>PSPout</name>
-        <qualifiedname>PSPout::PSPout</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="339" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pout_1a9e8a026b671cf663e5f2519534911ddd" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual PSPout::~PSPout</definition>
-        <argsstring>()</argsstring>
-        <name>~PSPout</name>
-        <qualifiedname>PSPout::~PSPout</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="326" column="11" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="326" bodyend="326"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pout_1a9e8a026b671cf663e5f2519534911ddd" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual PSPout::~PSPout</definition>
-        <argsstring>()</argsstring>
-        <name>~PSPout</name>
-        <qualifiedname>PSPout::~PSPout</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="342" column="11" bodyfile="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" bodystart="342" bodyend="342"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Class to access a full <ref refid="class_p_s_p" kindref="compound">PSP</ref> file (OUT) </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>PSP</label>
-        <link refid="class_p_s_p"/>
-      </node>
-      <node id="1">
-        <label>PSPout</label>
-        <link refid="class_p_s_pout"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="5">
-        <label>ComponentHeader</label>
-        <link refid="class_component_header"/>
-      </node>
-      <node id="3">
-        <label>MasterHeader</label>
-        <link refid="class_master_header"/>
-      </node>
-      <node id="2">
-        <label>PSP</label>
-        <link refid="class_p_s_p"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>header</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>cur</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>part</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>PSPout</label>
-        <link refid="class_p_s_pout"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PSPstanza</label>
-        <link refid="class_p_s_pstanza"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>comp</edgelabel>
-        </childnode>
-      </node>
-      <node id="6">
-        <label>SParticle</label>
-        <link refid="class_s_particle"/>
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-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="317" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="318" bodyend="330"/>
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-      <member refid="class_p_s_p_1a4414d3fc0c276655e781e9289ce74e71" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>check_dirname</name></member>
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-      <member refid="class_p_s_p_1abe89d646d7a19b2cb144bbb7766696c8" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>ComputeStats</name></member>
-      <member refid="class_p_s_p_1ac243122a19a28e859083d362a940cd9c" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>cur</name></member>
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-      <member refid="class_p_s_p_1a0fa94201613e3a29a3c881b5372b06a6" prot="public" virt="non-virtual"><scope>PSPout</scope><name>CurrentTime</name></member>
-      <member refid="class_p_s_p_1a75ffb3e202683386b7b9646afb349213" prot="public" virt="virtual"><scope>PSPout</scope><name>end</name></member>
-      <member refid="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" prot="public" virt="virtual"><scope>PSPout</scope><name>GetNamed</name></member>
-      <member refid="class_p_s_p_1a93484925bd1aee6e534ee7fdfa2e9311" prot="public" virt="virtual"><scope>PSPout</scope><name>GetNamed</name></member>
-      <member refid="class_p_s_pout_1a315c5defe2068ac25a9e634e2c0406f1" prot="public" virt="virtual"><scope>PSPout</scope><name>GetParticle</name></member>
-      <member refid="class_p_s_pout_1a315c5defe2068ac25a9e634e2c0406f1" prot="public" virt="virtual"><scope>PSPout</scope><name>GetParticle</name></member>
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-      <member refid="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" prot="public" virt="virtual"><scope>PSPout</scope><name>GetStanza</name></member>
-      <member refid="class_p_s_p_1a080aad64bc28ca28412c97263823a0ee" prot="public" virt="virtual"><scope>PSPout</scope><name>GetStanza</name></member>
-      <member refid="class_p_s_p_1a16e6c80a44c4e9902616f3f85a885c37" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>header</name></member>
-      <member refid="class_p_s_p_1a9120b778d2f1f85237e4000531a398b7" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>in</name></member>
-      <member refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>init</name></member>
-      <member refid="class_p_s_p_1a7efdf4f078e2773413d838bf2c99c188" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>init</name></member>
-      <member refid="class_p_s_p_1a5de18018153d3ebc6878483423c39cc6" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>magic</name></member>
-      <member refid="class_p_s_p_1aa420e0d35ceaa543236b116a3509cd24" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>mmask</name></member>
-      <member refid="class_p_s_p_1acf16e5ddf7cec3471faa970e98c18525" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>mtot</name></member>
-      <member refid="class_p_s_p_1a5cafa14a12e55cce6f446a3d52aa9ca3" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>new_dir</name></member>
-      <member refid="class_p_s_pout_1ad4f298bce6c3c72e5963c5751c427916" prot="public" virt="virtual"><scope>PSPout</scope><name>NextParticle</name></member>
-      <member refid="class_p_s_pout_1ad4f298bce6c3c72e5963c5751c427916" prot="public" virt="virtual"><scope>PSPout</scope><name>NextParticle</name></member>
-      <member refid="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" prot="public" virt="virtual"><scope>PSPout</scope><name>NextStanza</name></member>
-      <member refid="class_p_s_p_1aaa3c4a5f503b26e2ed91e6fb8ffc38ac" prot="public" virt="virtual"><scope>PSPout</scope><name>NextStanza</name></member>
-      <member refid="class_p_s_p_1a3db2dc47d3c7e19eee39f44f82bb69c4" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>nmask</name></member>
-      <member refid="class_p_s_p_1a5ea1bb15edde30f2976ad9887d6ed3d1" prot="public" virt="virtual"><scope>PSPout</scope><name>operator!=</name></member>
-      <member refid="class_p_s_p_1a5be729fe6610014a5300aed5bdd6c97e" prot="public" virt="virtual"><scope>PSPout</scope><name>operator++</name></member>
-      <member refid="class_p_s_p_1a3becaa90556a364f94574e3f0cdbc8e3" prot="public" virt="virtual"><scope>PSPout</scope><name>operator==</name></member>
-      <member refid="class_p_s_p_1a68c3dbf899baec8255f4af26e534cee9" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>part</name></member>
-      <member refid="class_p_s_p_1ae472fd355d5a72505917b8f1a878c738" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>pcount</name></member>
-      <member refid="class_p_s_p_1a13ab03638eda2112ca35865c82b52934" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>pmax</name></member>
-      <member refid="class_p_s_p_1ac5c8a08a13b0f8d66e4dcfe63cc1d511" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>pmed</name></member>
-      <member refid="class_p_s_p_1a3f18fa7ed15530d6dadb0e147113e387" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>pmin</name></member>
-      <member refid="class_p_s_pout_1aaeba5015643b8dc42553170b60938ff3" prot="private" virt="non-virtual"><scope>PSPout</scope><name>pos</name></member>
-      <member refid="class_p_s_pout_1a3c5392cc3a22649edf09b14717cc4121" prot="private" virt="non-virtual"><scope>PSPout</scope><name>pos</name></member>
-      <member refid="class_p_s_p_1a0d40b61dd7404d13d8d14ea8cdf15de3" prot="public" virt="non-virtual"><scope>PSPout</scope><name>PrintSummary</name></member>
-      <member refid="class_p_s_p_1a6b3a0cb0a82c573c806361375ad75ab8" prot="public" virt="non-virtual"><scope>PSPout</scope><name>PrintSummary</name></member>
-      <member refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" prot="public" virt="non-virtual"><scope>PSPout</scope><name>PSP</name></member>
-      <member refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" prot="public" virt="non-virtual"><scope>PSPout</scope><name>PSP</name></member>
-      <member refid="class_p_s_p_1a03a6fe03fcc607682fbaf29cc821d3c8" prot="public" virt="non-virtual"><scope>PSPout</scope><name>PSP</name></member>
-      <member refid="class_p_s_p_1ac6d4743f819bdea0568b8d9df184c45e" prot="public" virt="non-virtual"><scope>PSPout</scope><name>PSP</name></member>
-      <member refid="class_p_s_pout_1a0659d978c49eed7f1a8b1e0c37350ede" prot="public" virt="non-virtual"><scope>PSPout</scope><name>PSPout</name></member>
-      <member refid="class_p_s_pout_1a0659d978c49eed7f1a8b1e0c37350ede" prot="public" virt="non-virtual"><scope>PSPout</scope><name>PSPout</name></member>
-      <member refid="class_p_s_p_1a7bad6b96c2370bc3bb7abf3cd37f7de4" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>spos</name></member>
-      <member refid="class_p_s_p_1a305ce18ca9c87c48bacf025fbc8749b4" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>spos</name></member>
-      <member refid="class_p_s_p_1a655b102c58695d176811f6b9e16fcd76" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>stanzas</name></member>
-      <member refid="class_p_s_p_1a0f0f7c13568ccab0cf2aaca433e38fda" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>stanzas</name></member>
-      <member refid="class_p_s_p_1ac41847620427c5c925c3785406ee1219" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>VERBOSE</name></member>
-      <member refid="class_p_s_p_1adefeff8d008510d290fe86861a15f966" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>vmax</name></member>
-      <member refid="class_p_s_p_1a912a4ecef2f5011e96c7f837ff18d6c2" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>vmed</name></member>
-      <member refid="class_p_s_p_1a07e18a1a45d705e9e82360dd8abd093b" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>vmin</name></member>
-      <member refid="class_p_s_p_1a3b5328f0e732e5fd4e60339c7e81aa44" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>write_binary</name></member>
-      <member refid="class_p_s_p_1af76c58f257d5dcf8461886c7fde94342" prot="protected" virt="non-virtual"><scope>PSPout</scope><name>write_binary</name></member>
-      <member refid="class_p_s_p_1a6faf9fda5ed3f97e1c1d497418692bb1" prot="public" virt="non-virtual"><scope>PSPout</scope><name>writePSP</name></member>
-      <member refid="class_p_s_p_1a6faf9fda5ed3f97e1c1d497418692bb1" prot="public" virt="non-virtual"><scope>PSPout</scope><name>writePSP</name></member>
-      <member refid="class_p_s_p_1a9af6f9e5c41c73ae19ad840d2ae97d25" prot="public" virt="virtual"><scope>PSPout</scope><name>~PSP</name></member>
-      <member refid="class_p_s_p_1a9af6f9e5c41c73ae19ad840d2ae97d25" prot="public" virt="virtual"><scope>PSPout</scope><name>~PSP</name></member>
-      <member refid="class_p_s_pout_1a9e8a026b671cf663e5f2519534911ddd" prot="public" virt="virtual"><scope>PSPout</scope><name>~PSPout</name></member>
-      <member refid="class_p_s_pout_1a9e8a026b671cf663e5f2519534911ddd" prot="public" virt="virtual"><scope>PSPout</scope><name>~PSPout</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_p_s_pspl.xml b/doxyxml/class_p_s_pspl.xml
deleted file mode 100644
index e92f0a3..0000000
--- a/doxyxml/class_p_s_pspl.xml
+++ /dev/null
@@ -1,369 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_s_pspl" kind="class" language="C++" prot="public">
-    <compoundname>PSPspl</compoundname>
-    <basecompoundref refid="class_p_s_p" prot="public" virt="non-virtual">PSP</basecompoundref>
-    <basecompoundref refid="class_p_s_p" prot="public" virt="non-virtual">PSP</basecompoundref>
-    <includes refid="_p_s_p2_8_h" local="no">PSP2.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_p_s_pspl_1a3194623b11b067e6b99e657a93528627" prot="private" static="no" mutable="no">
-        <type>unsigned int</type>
-        <definition>unsigned int PSPspl::fcount</definition>
-        <argsstring></argsstring>
-        <name>fcount</name>
-        <qualifiedname>PSPspl::fcount</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="339" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="339" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_s_pspl_1af68138d2d7830403f6903d84b08c0dd8" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::string &gt;::iterator</type>
-        <definition>std::vector&lt; std::string &gt;::iterator PSPspl::fit</definition>
-        <argsstring></argsstring>
-        <name>fit</name>
-        <qualifiedname>PSPspl::fit</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="340" column="26" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="340" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_p_s_pspl_1af63e907442b509f9315712c86336cca7" prot="private" static="no" mutable="no">
-        <type>unsigned int</type>
-        <definition>unsigned int PSPspl::N</definition>
-        <argsstring></argsstring>
-        <name>N</name>
-        <qualifiedname>PSPspl::N</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="338" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" bodystart="338" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_p_s_pspl_1a07a1791bfbacdf7917b49ab60d6f4e1e" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSPspl::openNextBlob</definition>
-        <argsstring>()</argsstring>
-        <name>openNextBlob</name>
-        <qualifiedname>PSPspl::openNextBlob</qualifiedname>
-        <briefdescription>
-<para>Open next file part. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="343" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pspl_1a07a1791bfbacdf7917b49ab60d6f4e1e" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PSPspl::openNextBlob</definition>
-        <argsstring>()</argsstring>
-        <name>openNextBlob</name>
-        <qualifiedname>PSPspl::openNextBlob</qualifiedname>
-        <briefdescription>
-<para>Open next file part. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="362" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_p_s_pspl_1a5fba477a148cda6c52d37a9c020a7dbb" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSPspl::GetParticle</definition>
-        <argsstring>()</argsstring>
-        <name>GetParticle</name>
-        <qualifiedname>PSPspl::GetParticle</qualifiedname>
-        <reimplements refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863">GetParticle</reimplements>
-        <briefdescription>
-<para>Reset to beginning of particles for this component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="352" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pspl_1a5fba477a148cda6c52d37a9c020a7dbb" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSPspl::GetParticle</definition>
-        <argsstring>()</argsstring>
-        <name>GetParticle</name>
-        <qualifiedname>PSPspl::GetParticle</qualifiedname>
-        <reimplements refid="class_p_s_p_1a6bdb813865838e6b5118479b8a8dc863">GetParticle</reimplements>
-        <briefdescription>
-<para>Reset to beginning of particles for this component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="371" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pspl_1a4f8bca666da7b2e5565964538ddaa886" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSPspl::NextParticle</definition>
-        <argsstring>()</argsstring>
-        <name>NextParticle</name>
-        <qualifiedname>PSPspl::NextParticle</qualifiedname>
-        <reimplements refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8">NextParticle</reimplements>
-        <briefdescription>
-<para>Get next particle and return null at end. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="353" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pspl_1a4f8bca666da7b2e5565964538ddaa886" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type><ref refid="class_s_particle" kindref="compound">SParticle</ref> *</type>
-        <definition>virtual SParticle * PSPspl::NextParticle</definition>
-        <argsstring>()</argsstring>
-        <name>NextParticle</name>
-        <qualifiedname>PSPspl::NextParticle</qualifiedname>
-        <reimplements refid="class_p_s_p_1a1260d1db1a09a117be62692e34cf7bd8">NextParticle</reimplements>
-        <briefdescription>
-<para>Get next particle and return null at end. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="372" column="21"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pspl_1a4852efcb4eeeebfc2b975ea918c5d9aa" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>PSPspl::PSPspl</definition>
-        <argsstring>(const std::string &amp;file, const std::string dir=&quot;&quot;, bool verbose=false)</argsstring>
-        <name>PSPspl</name>
-        <qualifiedname>PSPspl::PSPspl</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>dir</declname>
-          <defval>&quot;&quot;</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Constuctors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="347" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_p_s_pspl_1a4852efcb4eeeebfc2b975ea918c5d9aa" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>PSPspl::PSPspl</definition>
-        <argsstring>(const std::string &amp;file, const std::string dir=&quot;&quot;, bool verbose=false)</argsstring>
-        <name>PSPspl</name>
-        <qualifiedname>PSPspl::PSPspl</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>dir</declname>
-          <defval>&quot;&quot;</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Constuctors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/PhaseSpace/PSP.H" line="366" column="3"/>
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-        <name>~PSPspl</name>
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diff --git a/doxyxml/class_p_s_pstanza.xml b/doxyxml/class_p_s_pstanza.xml
deleted file mode 100644
index c9352b0..0000000
--- a/doxyxml/class_p_s_pstanza.xml
+++ /dev/null
@@ -1,253 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_p_s_pstanza" kind="class" language="C++" prot="public">
-    <compoundname>PSPstanza</compoundname>
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-        <name>cparam</name>
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-        <name>id</name>
-        <qualifiedname>PSPstanza::id</qualifiedname>
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diff --git a/doxyxml/class_p_v_quad.xml b/doxyxml/class_p_v_quad.xml
deleted file mode 100644
index edb3049..0000000
--- a/doxyxml/class_p_v_quad.xml
+++ /dev/null
@@ -1,473 +0,0 @@
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-    <compoundname>PVQuad</compoundname>
-    <basecompoundref refid="class_legendre" prot="public" virt="non-virtual">Legendre</basecompoundref>
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-        <type>double</type>
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-        <type>double</type>
-        <definition>double PVQuad::return_pv</definition>
-        <argsstring>(double lambda, Eigen::VectorXd &amp;input)</argsstring>
-        <name>return_pv</name>
-        <qualifiedname>PVQuad::return_pv</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>lambda</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>input</declname>
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-        <references refid="class_p_v_quad_1a49787972b3582fa7a7381f5950f9e1de">get_integral</references>
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-        <type>double</type>
-        <definition>double PVQuad::return_pv</definition>
-        <argsstring>(double lambda, std::function&lt; double(double)&gt; func)</argsstring>
-        <name>return_pv</name>
-        <qualifiedname>PVQuad::return_pv</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>lambda</declname>
-        </param>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-          <declname>func</declname>
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-        <briefdescription>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/CauchyPV.H" line="104" column="10" bodyfile="/home/weinberg/Projects/EXP/include/CauchyPV.H" bodystart="104" bodyend="105"/>
-        <references refid="class_p_v_quad_1a49787972b3582fa7a7381f5950f9e1de">get_integral</references>
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-        <type>double</type>
-        <definition>double PVQuad::root</definition>
-        <argsstring>(int i)</argsstring>
-        <name>root</name>
-        <qualifiedname>PVQuad::root</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
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-        <detaileddescription>
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-        <references refid="class_p_v_quad_1af114416681890f0f2c321be098baa271" compoundref="_cauchy_p_v_8_h" startline="69">eign</references>
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-    <inheritancegraph>
-      <node id="2">
-        <label>Legendre</label>
-        <link refid="class_legendre"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
-      </node>
-      <node id="1">
-        <label>PVQuad</label>
-        <link refid="class_p_v_quad"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>Legendre</label>
-        <link refid="class_legendre"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>OrthoPoly</label>
-        <link refid="class_ortho_poly"/>
-      </node>
-      <node id="1">
-        <label>PVQuad</label>
-        <link refid="class_p_v_quad"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/CauchyPV.H" line="65" column="1" bodyfile="/home/weinberg/Projects/EXP/include/CauchyPV.H" bodystart="66" bodyend="112"/>
-    <listofallmembers>
-      <member refid="class_ortho_poly_1a327992a3cee582b2ddd35100a303461d" prot="protected" virt="non-virtual"><scope>PVQuad</scope><name>a</name></member>
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-      <member refid="class_legendre_1a269daa87798014d15c424060036918cf" prot="public" virt="virtual"><scope>PVQuad</scope><name>coef2</name></member>
-      <member refid="class_legendre_1af4ee4c6b608f71e0b294b606de7cf900" prot="public" virt="virtual"><scope>PVQuad</scope><name>coef3</name></member>
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-      <member refid="class_p_v_quad_1af114416681890f0f2c321be098baa271" prot="private" virt="non-virtual"><scope>PVQuad</scope><name>eign</name></member>
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-      <member refid="class_legendre_1a7f8a4f8230d4059d29fc06c106b8fb48" prot="public" virt="virtual"><scope>PVQuad</scope><name>f0</name></member>
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-      <member refid="class_p_v_quad_1a1a48edd350ed644195f5ea4015ef0ae7" prot="private" virt="non-virtual"><scope>PVQuad</scope><name>get_eigenvalues</name></member>
-      <member refid="class_p_v_quad_1a49787972b3582fa7a7381f5950f9e1de" prot="private" virt="non-virtual"><scope>PVQuad</scope><name>get_integral</name></member>
-      <member refid="class_p_v_quad_1a0c6a944809ea9310efbc2fbaf12ef44b" prot="private" virt="non-virtual"><scope>PVQuad</scope><name>get_orthopolies</name></member>
-      <member refid="class_legendre_1a3ff47311ca802bdf62979533b23bb947" prot="public" virt="virtual"><scope>PVQuad</scope><name>h</name></member>
-      <member refid="class_legendre_1a434e3f774067d26051087fe0c49f2620" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>Legendre</name></member>
-      <member refid="class_p_v_quad_1a29dbb3c795e8c0b6fb5b6afbe7ad46a4" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>mu</name></member>
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-      <member refid="class_p_v_quad_1a0134752fa8881a1291c1c347c404d64c" prot="private" virt="non-virtual"><scope>PVQuad</scope><name>nrml</name></member>
-      <member refid="class_p_v_quad_1a2ee47a539244ee355f3de8b4525b1b57" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>ovec</name></member>
-      <member refid="class_ortho_poly_1a3e70f7ac20305d4ae84c11b57713bbca" prot="protected" virt="non-virtual"><scope>PVQuad</scope><name>param</name></member>
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-      <member refid="class_p_v_quad_1a095fad8784772473c98761a1bd89298e" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>PVQuad</name></member>
-      <member refid="class_p_v_quad_1a07735c01d10110c3f960cc6af278f44a" prot="private" virt="non-virtual"><scope>PVQuad</scope><name>q0</name></member>
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-      <member refid="class_p_v_quad_1ab6b4fd9174ec2b9b37a35a68b56d446f" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>return_coefs</name></member>
-      <member refid="class_p_v_quad_1a02a1cab021a3c1cfef43e0fa1c9ee991" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>return_pv</name></member>
-      <member refid="class_p_v_quad_1a2b5bf27c335cd9300a5971e9eb1a11b4" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>return_pv</name></member>
-      <member refid="class_p_v_quad_1abc9fd5c6951826a64b5b37e69dd90326" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>return_pv</name></member>
-      <member refid="class_p_v_quad_1a90aa4b304efe79aea1ed458287b9001d" prot="public" virt="non-virtual"><scope>PVQuad</scope><name>root</name></member>
-      <member refid="class_legendre_1a0e7d5d53f303b11e78706f9368a690c8" prot="public" virt="virtual"><scope>PVQuad</scope><name>w</name></member>
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-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_particle.xml b/doxyxml/class_particle.xml
deleted file mode 100644
index b450d90..0000000
--- a/doxyxml/class_particle.xml
+++ /dev/null
@@ -1,710 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_particle" kind="class" language="C++" prot="public">
-    <compoundname>Particle</compoundname>
-    <derivedcompoundref refid="class_p_r_1_1_p_particle" prot="public" virt="non-virtual">PR::PParticle&lt; float &gt;</derivedcompoundref>
-    <derivedcompoundref refid="class_p_r_1_1_p_particle" prot="public" virt="non-virtual">PR::PParticle&lt; double &gt;</derivedcompoundref>
-    <derivedcompoundref refid="class_p_r_1_1_p_particle" prot="public" virt="non-virtual">PR::PParticle&lt; real &gt;</derivedcompoundref>
-    <includes refid="include_2_particle_8_h" local="no">Particle.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="class_particle_1a7cdcdaaa7c1177c733b888e9e60d0fb9" prot="public" static="no">
-        <type>std::pair&lt; unsigned short, unsigned short &gt;</type>
-        <definition>typedef std::pair&lt;unsigned short, unsigned short&gt; Particle::speciesKey</definition>
-        <argsstring></argsstring>
-        <name>speciesKey</name>
-        <qualifiedname>Particle::speciesKey</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="75" column="21" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="75" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_particle_1a1fb0b2da600a8ad44057823c19938515" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; char &gt;</type>
-        <definition>std::vector&lt;char&gt; Particle::buffer</definition>
-        <argsstring></argsstring>
-        <name>buffer</name>
-        <qualifiedname>Particle::buffer</qualifiedname>
-        <briefdescription>
-<para>MPI buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="23" column="15" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_particle_1a82e75d23385a26273d1d33fdde947a4a" prot="public" static="yes" mutable="no">
-        <type>const <ref refid="class_particle_1a7cdcdaaa7c1177c733b888e9e60d0fb9" kindref="member">speciesKey</ref></type>
-        <definition>const speciesKey Particle::defaultKey</definition>
-        <argsstring></argsstring>
-        <name>defaultKey</name>
-        <qualifiedname>Particle::defaultKey</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="76" column="27" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="76" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1adf9aa4abfe0f5205fd71755d80fa36f0" prot="public" static="yes" mutable="no">
-        <type>float</type>
-        <definition>float Particle::effort_default</definition>
-        <argsstring></argsstring>
-        <name>effort_default</name>
-        <qualifiedname>Particle::effort_default</qualifiedname>
-        <briefdescription>
-<para>Default effort value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="28" column="16" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_particle_1ac575fbf68c83530ee242ba22fb38a264" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Particle::acc[3]</definition>
-        <argsstring>[3]</argsstring>
-        <name>acc</name>
-        <qualifiedname>Particle::acc</qualifiedname>
-        <briefdescription>
-<para>Acceleration vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="40" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="40" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a04153827c29d7a278023801845f9c8f3" prot="public" static="no" mutable="no">
-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; Particle::dattrib</definition>
-        <argsstring></argsstring>
-        <name>dattrib</name>
-        <qualifiedname>Particle::dattrib</qualifiedname>
-        <briefdescription>
-<para>Real (double) attributes. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="52" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="52" bodyend="-1"/>
-        <referencedby refid="class_particle_1ab3e060354cd4e942646520e9af3fa341" compoundref="include_2_particle_8_h" startline="114" endline="119">getMPIBufSize</referencedby>
-        <referencedby refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" compoundref="_particle_reader_8_h" startline="267" endline="309">PR::PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1aab8165b0c94a793caa326da0b1a5ed60" prot="public" static="no" mutable="no">
-        <type>float</type>
-        <definition>float Particle::dtreq</definition>
-        <argsstring></argsstring>
-        <name>dtreq</name>
-        <qualifiedname>Particle::dtreq</qualifiedname>
-        <briefdescription>
-<para>Internal process time step (&lt;0 means ignore) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="58" column="9" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="58" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a478372f50864a61ed194123ed219f721" prot="public" static="no" mutable="no">
-        <type>float</type>
-        <definition>float Particle::effort</definition>
-        <argsstring></argsstring>
-        <name>effort</name>
-        <qualifiedname>Particle::effort</qualifiedname>
-        <briefdescription>
-<para>Scale factor for partitioning work. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="64" column="9" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="64" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" prot="public" static="no" mutable="no">
-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; Particle::iattrib</definition>
-        <argsstring></argsstring>
-        <name>iattrib</name>
-        <qualifiedname>Particle::iattrib</qualifiedname>
-        <briefdescription>
-<para>Integer attributes. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="49" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="49" bodyend="-1"/>
-        <referencedby refid="class_particle_1ab3e060354cd4e942646520e9af3fa341" compoundref="include_2_particle_8_h" startline="114" endline="119">getMPIBufSize</referencedby>
-        <referencedby refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" compoundref="_particle_reader_8_h" startline="267" endline="309">PR::PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a041051e4763a83554abed7304dfda4a7" prot="public" static="no" mutable="no">
-        <type>unsigned long</type>
-        <definition>unsigned long Particle::indx</definition>
-        <argsstring></argsstring>
-        <name>indx</name>
-        <qualifiedname>Particle::indx</qualifiedname>
-        <briefdescription>
-<para>Index for ordering. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="67" column="17" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="67" bodyend="-1"/>
-        <referencedby refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" compoundref="_particle_reader_8_h" startline="267" endline="309">PR::PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a40fcbe2d8647d560e2a7eb1227cf4808" prot="public" static="no" mutable="no">
-        <type>unsigned long</type>
-        <definition>unsigned long Particle::key</definition>
-        <argsstring></argsstring>
-        <name>key</name>
-        <qualifiedname>Particle::key</qualifiedname>
-        <briefdescription>
-<para>Hash key. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="73" column="17" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="73" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a01205d006724dc26a6f49758f2722382" prot="public" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned Particle::level</definition>
-        <argsstring></argsstring>
-        <name>level</name>
-        <qualifiedname>Particle::level</qualifiedname>
-        <briefdescription>
-<para>Multistep level. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="55" column="12" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="55" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1ae6d46dc24a6666d526f211151fecca5f" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Particle::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>Particle::mass</qualifiedname>
-        <briefdescription>
-<para>Mass of particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="31" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="31" bodyend="-1"/>
-        <referencedby refid="class_s_particle_1ae35d1a9ebc6560653ba922177f1743c5" compoundref="_s_particle_8_h" startline="17" endline="24">SParticle::cpy</referencedby>
-        <referencedby refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" compoundref="_particle_reader_8_h" startline="267" endline="309">PR::PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a3606e8a85c0b5ef30d7cf2777907e58e" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Particle::pos</definition>
-        <argsstring>[3]</argsstring>
-        <name>pos</name>
-        <qualifiedname>Particle::pos</qualifiedname>
-        <briefdescription>
-<para>Position vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="34" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="34" bodyend="-1"/>
-        <referencedby refid="class_s_particle_1ae35d1a9ebc6560653ba922177f1743c5" compoundref="_s_particle_8_h" startline="17" endline="24">SParticle::cpy</referencedby>
-        <referencedby refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" compoundref="_particle_reader_8_h" startline="267" endline="309">PR::PParticle&lt; real &gt;::read</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a235e3eb6c466429f43f4f4564e343724" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Particle::pot</definition>
-        <argsstring></argsstring>
-        <name>pot</name>
-        <qualifiedname>Particle::pot</qualifiedname>
-        <briefdescription>
-<para>Gravitational potential due to particles <linebreak/>
- </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="43" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="43" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1afffdbb3da7a0222fddde253f974b5f8a" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Particle::potext</definition>
-        <argsstring></argsstring>
-        <name>potext</name>
-        <qualifiedname>Particle::potext</qualifiedname>
-        <briefdescription>
-<para>Gravitational potential from external forces. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="46" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="46" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a5c7aecc4ecec7c9e8c8b928bd80e35ea" prot="public" static="no" mutable="no">
-        <type>float</type>
-        <definition>float Particle::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>Particle::scale</qualifiedname>
-        <briefdescription>
-<para>Internal size scale (&lt;0 means ignore) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="61" column="9" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="61" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a25f2943d2559c9b00e52595585022a47" prot="public" static="no" mutable="no">
-        <type><ref refid="class_particle_1a7cdcdaaa7c1177c733b888e9e60d0fb9" kindref="member">speciesKey</ref></type>
-        <definition>speciesKey Particle::skey</definition>
-        <argsstring></argsstring>
-        <name>skey</name>
-        <qualifiedname>Particle::skey</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Species key (this is a cache value to prevent endless on-the-fly reconstruction of the species key) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="80" column="14" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="80" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a49d4f04b43b6200dd4cef28da20a739d" prot="public" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned Particle::tree</definition>
-        <argsstring></argsstring>
-        <name>tree</name>
-        <qualifiedname>Particle::tree</qualifiedname>
-        <briefdescription>
-<para>Tree key. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="70" column="12" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="70" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_1a13bd0267040135a338f62130ca1614d6" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Particle::vel</definition>
-        <argsstring>[3]</argsstring>
-        <name>vel</name>
-        <qualifiedname>Particle::vel</qualifiedname>
-        <briefdescription>
-<para>Velocity vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="37" column="10" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="37" bodyend="-1"/>
-        <referencedby refid="class_s_particle_1ae35d1a9ebc6560653ba922177f1743c5" compoundref="_s_particle_8_h" startline="17" endline="24">SParticle::cpy</referencedby>
-        <referencedby refid="class_p_r_1_1_p_particle_1adae50eeb905813146d42bed5c850bc58" compoundref="_particle_reader_8_h" startline="267" endline="309">PR::PParticle&lt; real &gt;::read</referencedby>
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-    </sectiondef>
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-        <type>unsigned</type>
-        <definition>unsigned Particle::getMPIBufSize</definition>
-        <argsstring>(unsigned rsize, bool indexing)</argsstring>
-        <name>getMPIBufSize</name>
-        <qualifiedname>Particle::getMPIBufSize</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>rsize</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
-        </param>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> buffer size. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="114" column="12" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="114" bodyend="119"/>
-        <references refid="class_particle_1a04153827c29d7a278023801845f9c8f3" compoundref="include_2_particle_8_h" startline="52">dattrib</references>
-        <references refid="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" compoundref="include_2_particle_8_h" startline="49">iattrib</references>
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-        <type></type>
-        <definition>Particle::Particle</definition>
-        <argsstring>()</argsstring>
-        <name>Particle</name>
-        <qualifiedname>Particle::Particle</qualifiedname>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="83" column="3"/>
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-      <memberdef kind="function" id="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Particle::Particle</definition>
-        <argsstring>()</argsstring>
-        <name>Particle</name>
-        <qualifiedname>Particle::Particle</qualifiedname>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/Particle.h" line="17" column="3"/>
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-      <memberdef kind="function" id="class_particle_1a875d390662507790e0b248f53bff2ad1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Particle::Particle</definition>
-        <argsstring>(const Particle &amp;)</argsstring>
-        <name>Particle</name>
-        <qualifiedname>Particle::Particle</qualifiedname>
-        <param>
-          <type>const <ref refid="class_particle" kindref="compound">Particle</ref> &amp;</type>
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-        <briefdescription>
-<para>Copy constructor. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="89" column="3"/>
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-      <memberdef kind="function" id="class_particle_1a65da555cae2b76c9a6476797f3bbec14" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Particle::Particle</definition>
-        <argsstring>(const Particle &amp;p)</argsstring>
-        <name>Particle</name>
-        <qualifiedname>Particle::Particle</qualifiedname>
-        <param>
-          <type>const <ref refid="class_particle" kindref="compound">Particle</ref> &amp;</type>
-          <declname>p</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/Particle.h" line="20" column="3"/>
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-      <memberdef kind="function" id="class_particle_1a56a5ccec698415615a050e9bfd820b3a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Particle::Particle</definition>
-        <argsstring>(unsigned niatr, unsigned ndatr)</argsstring>
-        <name>Particle</name>
-        <qualifiedname>Particle::Particle</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>niatr</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>ndatr</declname>
-        </param>
-        <briefdescription>
-<para>Constructor with presized attribute lists. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="86" column="3"/>
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-        <type>void</type>
-        <definition>void Particle::readAscii</definition>
-        <argsstring>(bool indexing, int seq, std::istream *fin)</argsstring>
-        <name>readAscii</name>
-        <qualifiedname>Particle::readAscii</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
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-        <param>
-          <type>int</type>
-          <declname>seq</declname>
-        </param>
-        <param>
-          <type>std::istream *</type>
-          <declname>fin</declname>
-        </param>
-        <briefdescription>
-<para>Read particles from file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="92" column="8"/>
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-      <memberdef kind="function" id="class_particle_1a5522f47432b7ed4de4584dbea0ac12c7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Particle::readBinary</definition>
-        <argsstring>(unsigned rsize, bool indexing, int seq, std::istream *in)</argsstring>
-        <name>readBinary</name>
-        <qualifiedname>Particle::readBinary</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>rsize</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>seq</declname>
-        </param>
-        <param>
-          <type>std::istream *</type>
-          <declname>in</declname>
-        </param>
-        <briefdescription>
-<para>Read particles from file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="95" column="8"/>
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-      <memberdef kind="function" id="class_particle_1a63a4e5661ae98308893d86e33f059576" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Particle::writeAscii</definition>
-        <argsstring>(bool indexing, bool accel, std::ostream *out)</argsstring>
-        <name>writeAscii</name>
-        <qualifiedname>Particle::writeAscii</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>accel</declname>
-        </param>
-        <param>
-          <type>std::ostream *</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-<para>Write a particle in ascii format. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="98" column="8"/>
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-      <memberdef kind="function" id="class_particle_1a5bb1f74e19cebdb828f95af23bc386cf" prot="public" static="no" const="yes" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Particle::writeBinary</definition>
-        <argsstring>(unsigned rsize, bool indexing, std::ostream *out) const</argsstring>
-        <name>writeBinary</name>
-        <qualifiedname>Particle::writeBinary</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>rsize</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
-        </param>
-        <param>
-          <type>std::ostream *</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-<para>Write a particle in binary format (<ref refid="class_p_s_p" kindref="compound">PSP</ref>) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="108" column="8"/>
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-      <memberdef kind="function" id="class_particle_1ac36f173dd3cf6b19a6e8bf8538fabf4b" prot="public" static="no" const="yes" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Particle::writeBinaryBuffered</definition>
-        <argsstring>(unsigned rsize, bool indexing, std::ostream *out, ParticleBuffer &amp;buf) const</argsstring>
-        <name>writeBinaryBuffered</name>
-        <qualifiedname>Particle::writeBinaryBuffered</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>rsize</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
-        </param>
-        <param>
-          <type>std::ostream *</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type><ref refid="class_particle_buffer" kindref="compound">ParticleBuffer</ref> &amp;</type>
-          <declname>buf</declname>
-        </param>
-        <briefdescription>
-<para>Write a particle in binary format (<ref refid="class_p_s_p" kindref="compound">PSP</ref>) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="101" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_particle_1a6a0d56643139eafef77b04372098e34a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>int</type>
-        <definition>int Particle::writeBinaryMPI</definition>
-        <argsstring>(char *buf, unsigned rsize, bool indexing)</argsstring>
-        <name>writeBinaryMPI</name>
-        <qualifiedname>Particle::writeBinaryMPI</qualifiedname>
-        <param>
-          <type>char *</type>
-          <declname>buf</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>rsize</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
-        </param>
-        <briefdescription>
-<para>Write a particle in binary format (<ref refid="class_p_s_p" kindref="compound">PSP</ref>) to buffer for MPI. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="111" column="7"/>
-      </memberdef>
-      <memberdef kind="function" id="class_particle_1aeae52277bb1d013be9080d87d3b6a436" prot="public" static="no" const="yes" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Particle::writeBinaryThreaded</definition>
-        <argsstring>(unsigned rsize, bool indexing, ParticleBuffer &amp;buf, int count) const</argsstring>
-        <name>writeBinaryThreaded</name>
-        <qualifiedname>Particle::writeBinaryThreaded</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>rsize</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
-        </param>
-        <param>
-          <type><ref refid="class_particle_buffer" kindref="compound">ParticleBuffer</ref> &amp;</type>
-          <declname>buf</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>count</declname>
-        </param>
-        <briefdescription>
-<para>Write a particle in binary format (<ref refid="class_p_s_p" kindref="compound">PSP</ref>), threaded version. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="104" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Keeps track of all info for one particle. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>The iattrib and dattrib vectors are used by individual components to carry additional parameters specific to different particle types. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="3">
-        <label>PR::PParticle&lt; double &gt;</label>
-        <link refid="class_p_r_1_1_p_particle"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PR::PParticle&lt; float &gt;</label>
-        <link refid="class_p_r_1_1_p_particle"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PR::PParticle&lt; real &gt;</label>
-        <link refid="class_p_r_1_1_p_particle"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Particle</label>
-        <link refid="class_particle"/>
-      </node>
-    </inheritancegraph>
-    <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="18" column="1" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="19" bodyend="120"/>
-    <listofallmembers>
-      <member refid="class_particle_1ac575fbf68c83530ee242ba22fb38a264" prot="public" virt="non-virtual"><scope>Particle</scope><name>acc</name></member>
-      <member refid="class_particle_1a1fb0b2da600a8ad44057823c19938515" prot="private" virt="non-virtual"><scope>Particle</scope><name>buffer</name></member>
-      <member refid="class_particle_1a04153827c29d7a278023801845f9c8f3" prot="public" virt="non-virtual"><scope>Particle</scope><name>dattrib</name></member>
-      <member refid="class_particle_1a82e75d23385a26273d1d33fdde947a4a" prot="public" virt="non-virtual"><scope>Particle</scope><name>defaultKey</name></member>
-      <member refid="class_particle_1aab8165b0c94a793caa326da0b1a5ed60" prot="public" virt="non-virtual"><scope>Particle</scope><name>dtreq</name></member>
-      <member refid="class_particle_1a478372f50864a61ed194123ed219f721" prot="public" virt="non-virtual"><scope>Particle</scope><name>effort</name></member>
-      <member refid="class_particle_1adf9aa4abfe0f5205fd71755d80fa36f0" prot="public" virt="non-virtual"><scope>Particle</scope><name>effort_default</name></member>
-      <member refid="class_particle_1ab3e060354cd4e942646520e9af3fa341" prot="public" virt="non-virtual"><scope>Particle</scope><name>getMPIBufSize</name></member>
-      <member refid="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" prot="public" virt="non-virtual"><scope>Particle</scope><name>iattrib</name></member>
-      <member refid="class_particle_1a041051e4763a83554abed7304dfda4a7" prot="public" virt="non-virtual"><scope>Particle</scope><name>indx</name></member>
-      <member refid="class_particle_1a40fcbe2d8647d560e2a7eb1227cf4808" prot="public" virt="non-virtual"><scope>Particle</scope><name>key</name></member>
-      <member refid="class_particle_1a01205d006724dc26a6f49758f2722382" prot="public" virt="non-virtual"><scope>Particle</scope><name>level</name></member>
-      <member refid="class_particle_1ae6d46dc24a6666d526f211151fecca5f" prot="public" virt="non-virtual"><scope>Particle</scope><name>mass</name></member>
-      <member refid="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" prot="public" virt="non-virtual"><scope>Particle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a56a5ccec698415615a050e9bfd820b3a" prot="public" virt="non-virtual"><scope>Particle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a875d390662507790e0b248f53bff2ad1" prot="public" virt="non-virtual"><scope>Particle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" prot="public" virt="non-virtual"><scope>Particle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a65da555cae2b76c9a6476797f3bbec14" prot="public" virt="non-virtual"><scope>Particle</scope><name>Particle</name></member>
-      <member refid="class_particle_1a3606e8a85c0b5ef30d7cf2777907e58e" prot="public" virt="non-virtual"><scope>Particle</scope><name>pos</name></member>
-      <member refid="class_particle_1a235e3eb6c466429f43f4f4564e343724" prot="public" virt="non-virtual"><scope>Particle</scope><name>pot</name></member>
-      <member refid="class_particle_1afffdbb3da7a0222fddde253f974b5f8a" prot="public" virt="non-virtual"><scope>Particle</scope><name>potext</name></member>
-      <member refid="class_particle_1ad619d82125defc278a08e2908b6115c7" prot="public" virt="non-virtual"><scope>Particle</scope><name>readAscii</name></member>
-      <member refid="class_particle_1a5522f47432b7ed4de4584dbea0ac12c7" prot="public" virt="non-virtual"><scope>Particle</scope><name>readBinary</name></member>
-      <member refid="class_particle_1a5c7aecc4ecec7c9e8c8b928bd80e35ea" prot="public" virt="non-virtual"><scope>Particle</scope><name>scale</name></member>
-      <member refid="class_particle_1a25f2943d2559c9b00e52595585022a47" prot="public" virt="non-virtual"><scope>Particle</scope><name>skey</name></member>
-      <member refid="class_particle_1a7cdcdaaa7c1177c733b888e9e60d0fb9" prot="public" virt="non-virtual"><scope>Particle</scope><name>speciesKey</name></member>
-      <member refid="class_particle_1a49d4f04b43b6200dd4cef28da20a739d" prot="public" virt="non-virtual"><scope>Particle</scope><name>tree</name></member>
-      <member refid="class_particle_1a13bd0267040135a338f62130ca1614d6" prot="public" virt="non-virtual"><scope>Particle</scope><name>vel</name></member>
-      <member refid="class_particle_1a63a4e5661ae98308893d86e33f059576" prot="public" virt="non-virtual"><scope>Particle</scope><name>writeAscii</name></member>
-      <member refid="class_particle_1a5bb1f74e19cebdb828f95af23bc386cf" prot="public" virt="non-virtual"><scope>Particle</scope><name>writeBinary</name></member>
-      <member refid="class_particle_1ac36f173dd3cf6b19a6e8bf8538fabf4b" prot="public" virt="non-virtual"><scope>Particle</scope><name>writeBinaryBuffered</name></member>
-      <member refid="class_particle_1a6a0d56643139eafef77b04372098e34a" prot="public" virt="non-virtual"><scope>Particle</scope><name>writeBinaryMPI</name></member>
-      <member refid="class_particle_1aeae52277bb1d013be9080d87d3b6a436" prot="public" virt="non-virtual"><scope>Particle</scope><name>writeBinaryThreaded</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_particle_buffer.xml b/doxyxml/class_particle_buffer.xml
deleted file mode 100644
index ad9a452..0000000
--- a/doxyxml/class_particle_buffer.xml
+++ /dev/null
@@ -1,254 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_particle_buffer" kind="class" language="C++" prot="public">
-    <compoundname>ParticleBuffer</compoundname>
-    <includes refid="include_2_particle_8_h" local="no">Particle.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_particle_buffer_1ae0dbcb81d6e5c4f8db390f09461534ea" prot="public" static="no" mutable="no">
-        <type>char *</type>
-        <definition>char* ParticleBuffer::Loc</definition>
-        <argsstring></argsstring>
-        <name>Loc</name>
-        <qualifiedname>ParticleBuffer::Loc</qualifiedname>
-        <briefdescription>
-<para>Buffer location. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="147" column="8" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="147" bodyend="-1"/>
-        <referencedby refid="class_particle_buffer_1aaec0c031810fad25ca9397494ebb34fc" compoundref="include_2_particle_8_h" startline="162" endline="162">setLocation</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_buffer_1ad1234c964357d82be0677be6cd3a885c" prot="public" static="no" mutable="no">
-        <type>const unsigned</type>
-        <definition>const unsigned ParticleBuffer::maxBufCount</definition>
-        <argsstring></argsstring>
-        <name>maxBufCount</name>
-        <qualifiedname>ParticleBuffer::maxBufCount</qualifiedname>
-        <initializer>= 1048576</initializer>
-        <briefdescription>
-<para>Buffer maximum particle count. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="128" column="18" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="128" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_particle_buffer_1ab9a31c4716fd288293660d9a5e6277fe" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned ParticleBuffer::bufCount</definition>
-        <argsstring></argsstring>
-        <name>bufCount</name>
-        <qualifiedname>ParticleBuffer::bufCount</qualifiedname>
-        <briefdescription>
-<para>Buffer particle count. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="142" column="12" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="142" bodyend="-1"/>
-        <referencedby refid="class_particle_buffer_1ab7891de1d66a6109d9433c8c2a1f6249" compoundref="include_2_particle_8_h" startline="156" endline="156">operator++</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_buffer_1a44acc0ab241b4073573b275d2accd74a" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned ParticleBuffer::bufSize</definition>
-        <argsstring></argsstring>
-        <name>bufSize</name>
-        <qualifiedname>ParticleBuffer::bufSize</qualifiedname>
-        <briefdescription>
-<para>Buffer size. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="139" column="12" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="139" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_buffer_1a9214167348e2e3c4ed7cf0e1d180870b" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; char &gt;</type>
-        <definition>std::vector&lt;char&gt; ParticleBuffer::charBuffer</definition>
-        <argsstring></argsstring>
-        <name>charBuffer</name>
-        <qualifiedname>ParticleBuffer::charBuffer</qualifiedname>
-        <briefdescription>
-<para>Write buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="133" column="15" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="133" bodyend="-1"/>
-        <referencedby refid="class_particle_buffer_1a6c457bb37d16e709eccbdb9861fd5991" compoundref="include_2_particle_8_h" startline="159" endline="159">operator()</referencedby>
-        <referencedby refid="class_particle_buffer_1aaec0c031810fad25ca9397494ebb34fc" compoundref="include_2_particle_8_h" startline="162" endline="162">setLocation</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_buffer_1ac4ed20cda1ff2f216fb886b0cd0ab41e" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned ParticleBuffer::parSize</definition>
-        <argsstring></argsstring>
-        <name>parSize</name>
-        <qualifiedname>ParticleBuffer::parSize</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> size. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="136" column="12" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="136" bodyend="-1"/>
-        <referencedby refid="class_particle_buffer_1a26df2a34f52bd857b23a213246609816" compoundref="include_2_particle_8_h" startline="165" endline="165">pMemSize</referencedby>
-        <referencedby refid="class_particle_buffer_1aaec0c031810fad25ca9397494ebb34fc" compoundref="include_2_particle_8_h" startline="162" endline="162">setLocation</referencedby>
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-    <sectiondef kind="public-func">
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-        <type>char *</type>
-        <definition>char * ParticleBuffer::operator()</definition>
-        <argsstring>()</argsstring>
-        <name>operator()</name>
-        <qualifiedname>ParticleBuffer::operator()</qualifiedname>
-        <briefdescription>
-<para>Raw access to particle buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="159" column="8" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="159" bodyend="159"/>
-        <references refid="class_particle_buffer_1a9214167348e2e3c4ed7cf0e1d180870b" compoundref="include_2_particle_8_h" startline="133">charBuffer</references>
-      </memberdef>
-      <memberdef kind="function" id="class_particle_buffer_1ab7891de1d66a6109d9433c8c2a1f6249" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void ParticleBuffer::operator++</definition>
-        <argsstring>(int)</argsstring>
-        <name>operator++</name>
-        <qualifiedname>ParticleBuffer::operator++</qualifiedname>
-        <param>
-          <type>int</type>
-        </param>
-        <briefdescription>
-<para>Increment the particle counter. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="156" column="8" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="156" bodyend="156"/>
-        <references refid="class_particle_buffer_1ab9a31c4716fd288293660d9a5e6277fe" compoundref="include_2_particle_8_h" startline="142">bufCount</references>
-      </memberdef>
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-        <type></type>
-        <definition>ParticleBuffer::ParticleBuffer</definition>
-        <argsstring>(unsigned rsize, bool indexing, const Particle *p)</argsstring>
-        <name>ParticleBuffer</name>
-        <qualifiedname>ParticleBuffer::ParticleBuffer</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>rsize</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>indexing</declname>
-        </param>
-        <param>
-          <type>const <ref refid="class_particle" kindref="compound">Particle</ref> *</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="150" column="3"/>
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-        <type>unsigned</type>
-        <definition>unsigned ParticleBuffer::pMemSize</definition>
-        <argsstring>()</argsstring>
-        <name>pMemSize</name>
-        <qualifiedname>ParticleBuffer::pMemSize</qualifiedname>
-        <briefdescription>
-<para>Get memory per particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="165" column="12" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="165" bodyend="165"/>
-        <references refid="class_particle_buffer_1ac4ed20cda1ff2f216fb886b0cd0ab41e" compoundref="include_2_particle_8_h" startline="136">parSize</references>
-      </memberdef>
-      <memberdef kind="function" id="class_particle_buffer_1aaec0c031810fad25ca9397494ebb34fc" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void ParticleBuffer::setLocation</definition>
-        <argsstring>(int n)</argsstring>
-        <name>setLocation</name>
-        <qualifiedname>ParticleBuffer::setLocation</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Set location to the nth particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="162" column="8" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="162" bodyend="162"/>
-        <references refid="class_particle_buffer_1a9214167348e2e3c4ed7cf0e1d180870b" compoundref="include_2_particle_8_h" startline="133">charBuffer</references>
-        <references refid="class_particle_buffer_1ae0dbcb81d6e5c4f8db390f09461534ea" compoundref="include_2_particle_8_h" startline="147">Loc</references>
-        <references refid="class_particle_buffer_1ac4ed20cda1ff2f216fb886b0cd0ab41e" compoundref="include_2_particle_8_h" startline="136">parSize</references>
-      </memberdef>
-      <memberdef kind="function" id="class_particle_buffer_1ae1db7eea29ba7f9add495c3931dc1e3b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void ParticleBuffer::writeBuffer</definition>
-        <argsstring>(std::ostream *out, bool finish=false)</argsstring>
-        <name>writeBuffer</name>
-        <qualifiedname>ParticleBuffer::writeBuffer</qualifiedname>
-        <param>
-          <type>std::ostream *</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>finish</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Write buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="153" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Helper class for writing a buffer of particles. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="123" column="1" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="124" bodyend="167"/>
-    <listofallmembers>
-      <member refid="class_particle_buffer_1ab9a31c4716fd288293660d9a5e6277fe" prot="protected" virt="non-virtual"><scope>ParticleBuffer</scope><name>bufCount</name></member>
-      <member refid="class_particle_buffer_1a44acc0ab241b4073573b275d2accd74a" prot="protected" virt="non-virtual"><scope>ParticleBuffer</scope><name>bufSize</name></member>
-      <member refid="class_particle_buffer_1a9214167348e2e3c4ed7cf0e1d180870b" prot="protected" virt="non-virtual"><scope>ParticleBuffer</scope><name>charBuffer</name></member>
-      <member refid="class_particle_buffer_1ae0dbcb81d6e5c4f8db390f09461534ea" prot="public" virt="non-virtual"><scope>ParticleBuffer</scope><name>Loc</name></member>
-      <member refid="class_particle_buffer_1ad1234c964357d82be0677be6cd3a885c" prot="public" virt="non-virtual"><scope>ParticleBuffer</scope><name>maxBufCount</name></member>
-      <member refid="class_particle_buffer_1a6c457bb37d16e709eccbdb9861fd5991" prot="public" virt="non-virtual"><scope>ParticleBuffer</scope><name>operator()</name></member>
-      <member refid="class_particle_buffer_1ab7891de1d66a6109d9433c8c2a1f6249" prot="public" virt="non-virtual"><scope>ParticleBuffer</scope><name>operator++</name></member>
-      <member refid="class_particle_buffer_1ac4ed20cda1ff2f216fb886b0cd0ab41e" prot="protected" virt="non-virtual"><scope>ParticleBuffer</scope><name>parSize</name></member>
-      <member refid="class_particle_buffer_1a3f6250a8f96673dcc7548c6a7d56ac8e" prot="public" virt="non-virtual"><scope>ParticleBuffer</scope><name>ParticleBuffer</name></member>
-      <member refid="class_particle_buffer_1a26df2a34f52bd857b23a213246609816" prot="public" virt="non-virtual"><scope>ParticleBuffer</scope><name>pMemSize</name></member>
-      <member refid="class_particle_buffer_1aaec0c031810fad25ca9397494ebb34fc" prot="public" virt="non-virtual"><scope>ParticleBuffer</scope><name>setLocation</name></member>
-      <member refid="class_particle_buffer_1ae1db7eea29ba7f9add495c3931dc1e3b" prot="public" virt="non-virtual"><scope>ParticleBuffer</scope><name>writeBuffer</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_particle_ferry.xml b/doxyxml/class_particle_ferry.xml
deleted file mode 100644
index bdcedcf..0000000
--- a/doxyxml/class_particle_ferry.xml
+++ /dev/null
@@ -1,386 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_particle_ferry" kind="class" language="C++" prot="public">
-    <compoundname>ParticleFerry</compoundname>
-    <includes refid="_particle_ferry_8_h" local="no">ParticleFerry.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_particle_ferry_1a9b1df17fe39d32a0c918a535e0b00171" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; char &gt;</type>
-        <definition>std::vector&lt;char&gt; ParticleFerry::buf</definition>
-        <argsstring></argsstring>
-        <name>buf</name>
-        <qualifiedname>ParticleFerry::buf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="20" column="15" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a2766c3d4d30e9f2da84dcf72a37afc58" prot="private" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned ParticleFerry::bufpos</definition>
-        <argsstring></argsstring>
-        <name>bufpos</name>
-        <qualifiedname>ParticleFerry::bufpos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="22" column="12" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a48c119b69b5f548e4dbe87f3989ade7d" prot="private" static="no" mutable="no">
-        <type>size_t</type>
-        <definition>size_t ParticleFerry::bufsiz</definition>
-        <argsstring></argsstring>
-        <name>bufsiz</name>
-        <qualifiedname>ParticleFerry::bufsiz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="19" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="19" bodyend="-1"/>
-        <referencedby refid="class_particle_ferry_1abfab74b8ba486afa91e757074b8d5a94" compoundref="_particle_ferry_8_h" startline="60" endline="60">getBufsize</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a134bfcd88436c94804d24c3d244b267e" prot="private" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned ParticleFerry::ibufcount</definition>
-        <argsstring></argsstring>
-        <name>ibufcount</name>
-        <qualifiedname>ParticleFerry::ibufcount</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="22" column="19" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a7170c3f77b954e66c7a92033a671aaa4" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ParticleFerry::idxpos</definition>
-        <argsstring></argsstring>
-        <name>idxpos</name>
-        <qualifiedname>ParticleFerry::idxpos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="25" column="22" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="25" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a3d59cc67a8834ae723ffe5676facffc0" prot="private" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned ParticleFerry::itotcount</definition>
-        <argsstring></argsstring>
-        <name>itotcount</name>
-        <qualifiedname>ParticleFerry::itotcount</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="22" column="29" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a085af18de974b3d75bd80023d39b6e53" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ParticleFerry::keypos</definition>
-        <argsstring></argsstring>
-        <name>keypos</name>
-        <qualifiedname>ParticleFerry::keypos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="25" column="7" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="25" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a786643ea2e4b606db70b01996b823f83" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ParticleFerry::ndmax</definition>
-        <argsstring></argsstring>
-        <name>ndmax</name>
-        <qualifiedname>ParticleFerry::ndmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="18" column="13" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a8da9f51543b67b0891bc1888b0d0c96e" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ParticleFerry::nimax</definition>
-        <argsstring></argsstring>
-        <name>nimax</name>
-        <qualifiedname>ParticleFerry::nimax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="18" column="7" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_particle_ferry_1a4174e6cd52ab29e704fcc74177bfb52e" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ParticleFerry::treepos</definition>
-        <argsstring></argsstring>
-        <name>treepos</name>
-        <qualifiedname>ParticleFerry::treepos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="25" column="14" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="25" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_particle_ferry_1a4e5f03c1fd509974fd8e1bc7e3303f3b" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void ParticleFerry::BufferRecv</definition>
-        <argsstring>()</argsstring>
-        <name>BufferRecv</name>
-        <qualifiedname>ParticleFerry::BufferRecv</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="28" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_particle_ferry_1ae9b995e951a15078a2c2a473abc90a01" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void ParticleFerry::BufferSend</definition>
-        <argsstring>()</argsstring>
-        <name>BufferSend</name>
-        <qualifiedname>ParticleFerry::BufferSend</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="27" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_particle_ferry_1a3e0cc48d7e45755d0913f48b0913b22f" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void ParticleFerry::particleBufInit</definition>
-        <argsstring>()</argsstring>
-        <name>particleBufInit</name>
-        <qualifiedname>ParticleFerry::particleBufInit</qualifiedname>
-        <briefdescription>
-<para>Determine size of buffer needed. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="31" column="8"/>
-      </memberdef>
-    </sectiondef>
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-        <type>size_t</type>
-        <definition>size_t ParticleFerry::getBufsize</definition>
-        <argsstring>()</argsstring>
-        <name>getBufsize</name>
-        <qualifiedname>ParticleFerry::getBufsize</qualifiedname>
-        <briefdescription>
-<para>Size needed for a single particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="60" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="60" bodyend="60"/>
-        <references refid="class_particle_ferry_1a48c119b69b5f548e4dbe87f3989ade7d" compoundref="_particle_ferry_8_h" startline="19">bufsiz</references>
-      </memberdef>
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-        <type></type>
-        <definition>ParticleFerry::ParticleFerry</definition>
-        <argsstring>(int nimax, int ndmax)</argsstring>
-        <name>ParticleFerry</name>
-        <qualifiedname>ParticleFerry::ParticleFerry</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>nimax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ndmax</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="36" column="3"/>
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-        <type>void</type>
-        <definition>void ParticleFerry::particlePack</definition>
-        <argsstring>(PartPtr in, char *buffer)</argsstring>
-        <name>particlePack</name>
-        <qualifiedname>ParticleFerry::particlePack</qualifiedname>
-        <param>
-          <type><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref></type>
-          <declname>in</declname>
-        </param>
-        <param>
-          <type>char *</type>
-          <declname>buffer</declname>
-        </param>
-        <briefdescription>
-<para>Pack particle into buffer. Caller provides buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="42" column="8"/>
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-        <type>void</type>
-        <definition>void ParticleFerry::particleUnpack</definition>
-        <argsstring>(PartPtr out, char *buffer)</argsstring>
-        <name>particleUnpack</name>
-        <qualifiedname>ParticleFerry::particleUnpack</qualifiedname>
-        <param>
-          <type><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref></type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>char *</type>
-          <declname>buffer</declname>
-        </param>
-        <briefdescription>
-<para>Unpack buffer into particle. Caller provides buffer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="45" column="8"/>
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-        <type><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref></type>
-        <definition>PartPtr ParticleFerry::RecvParticle</definition>
-        <argsstring>()</argsstring>
-        <name>RecvParticle</name>
-        <qualifiedname>ParticleFerry::RecvParticle</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="56" column="11"/>
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-        <type>void</type>
-        <definition>void ParticleFerry::SendParticle</definition>
-        <argsstring>(PartPtr part)</argsstring>
-        <name>SendParticle</name>
-        <qualifiedname>ParticleFerry::SendParticle</qualifiedname>
-        <param>
-          <type><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref></type>
-          <declname>part</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Send and receive particles. Uses <ref refid="class_particle_ferry" kindref="compound">ParticleFerry</ref> internally maintained buffer </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="54" column="8"/>
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-        <type>void</type>
-        <definition>void ParticleFerry::ShipParticles</definition>
-        <argsstring>(unsigned to, unsigned from, unsigned &amp;total)</argsstring>
-        <name>ShipParticles</name>
-        <qualifiedname>ParticleFerry::ShipParticles</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>to</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>from</declname>
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-        <param>
-          <type>unsigned &amp;</type>
-          <declname>total</declname>
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-        <briefdescription>
-<para>Send message to receiver: get ready for bulk shipment of particles. </para>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="48" column="8"/>
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-        <type></type>
-        <definition>ParticleFerry::~ParticleFerry</definition>
-        <argsstring>()</argsstring>
-        <name>~ParticleFerry</name>
-        <qualifiedname>ParticleFerry::~ParticleFerry</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="39" column="3"/>
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-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>For interprocess communication, need static structure for MPI mapping </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/ParticleFerry.H" line="14" column="1" bodyfile="/home/weinberg/Projects/EXP/src/ParticleFerry.H" bodystart="15" bodyend="61"/>
-    <listofallmembers>
-      <member refid="class_particle_ferry_1a9b1df17fe39d32a0c918a535e0b00171" prot="private" virt="non-virtual"><scope>ParticleFerry</scope><name>buf</name></member>
-      <member refid="class_particle_ferry_1a4e5f03c1fd509974fd8e1bc7e3303f3b" prot="private" virt="non-virtual"><scope>ParticleFerry</scope><name>BufferRecv</name></member>
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diff --git a/doxyxml/class_perfect.xml b/doxyxml/class_perfect.xml
deleted file mode 100644
index d40a0c6..0000000
--- a/doxyxml/class_perfect.xml
+++ /dev/null
@@ -1,445 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_perfect" kind="class" language="C++" prot="public">
-    <compoundname>Perfect</compoundname>
-    <includes refid="staeckel_8_h" local="no">staeckel.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_perfect_1a6649f7890c55659d185fc593e6f87841" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Perfect::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>Perfect::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="9" column="10" bodyfile="/home/weinberg/Projects/EXP/include/staeckel.H" bodystart="9" bodyend="-1"/>
-        <referencedby refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" compoundref="staeckel_8_h" startline="14" endline="23">set_Perfect</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_perfect_1addada398ddf928531d93ad88efdc3b03" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Perfect::alpha</definition>
-        <argsstring></argsstring>
-        <name>alpha</name>
-        <qualifiedname>Perfect::alpha</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="10" column="10" bodyfile="/home/weinberg/Projects/EXP/include/staeckel.H" bodystart="10" bodyend="-1"/>
-        <referencedby refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" compoundref="staeckel_8_h" startline="14" endline="23">set_Perfect</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_perfect_1a352135ef809687ada5638565ac66d622" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Perfect::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>Perfect::b</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="9" column="12" bodyfile="/home/weinberg/Projects/EXP/include/staeckel.H" bodystart="9" bodyend="-1"/>
-        <referencedby refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" compoundref="staeckel_8_h" startline="14" endline="23">set_Perfect</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_perfect_1a0b498c98fcaad321059a6b4bb2e99c75" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Perfect::beta</definition>
-        <argsstring></argsstring>
-        <name>beta</name>
-        <qualifiedname>Perfect::beta</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="10" column="16" bodyfile="/home/weinberg/Projects/EXP/include/staeckel.H" bodystart="10" bodyend="-1"/>
-        <referencedby refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" compoundref="staeckel_8_h" startline="14" endline="23">set_Perfect</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_perfect_1ad8f19c3ab380ef6f3c5bf27cba5dd589" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Perfect::G</definition>
-        <argsstring></argsstring>
-        <name>G</name>
-        <qualifiedname>Perfect::G</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="11" column="10" bodyfile="/home/weinberg/Projects/EXP/include/staeckel.H" bodystart="11" bodyend="-1"/>
-        <referencedby refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" compoundref="staeckel_8_h" startline="14" endline="23">set_Perfect</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_perfect_1a896e531af1ece39d761550299e9a4ae2" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Perfect::M</definition>
-        <argsstring></argsstring>
-        <name>M</name>
-        <qualifiedname>Perfect::M</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="11" column="12" bodyfile="/home/weinberg/Projects/EXP/include/staeckel.H" bodystart="11" bodyend="-1"/>
-        <referencedby refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" compoundref="staeckel_8_h" startline="14" endline="23">set_Perfect</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_perfect_1a20e44215515e62dfc1143c754faeeba7" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Perfect::rho0</definition>
-        <argsstring></argsstring>
-        <name>rho0</name>
-        <qualifiedname>Perfect::rho0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="11" column="14" bodyfile="/home/weinberg/Projects/EXP/include/staeckel.H" bodystart="11" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_perfect_1a133252f94881eff71e139a7b81e4c67c" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Perfect::W0</definition>
-        <argsstring></argsstring>
-        <name>W0</name>
-        <qualifiedname>Perfect::W0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="12" column="10" bodyfile="/home/weinberg/Projects/EXP/include/staeckel.H" bodystart="12" bodyend="-1"/>
-        <referencedby refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" compoundref="staeckel_8_h" startline="14" endline="23">set_Perfect</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_perfect_1a1644ee2706020559cd4e22cd486e1c0f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Perfect::dFlambda</definition>
-        <argsstring>(double)</argsstring>
-        <name>dFlambda</name>
-        <qualifiedname>Perfect::dFlambda</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="39" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_perfect_1a02f633bdfe059be45e48af2a088ec3bb" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Perfect::dFmu</definition>
-        <argsstring>(double)</argsstring>
-        <name>dFmu</name>
-        <qualifiedname>Perfect::dFmu</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="37" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_perfect_1a6f894270e46a92541e458e06b6384aa0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Perfect::Feff_lambda</definition>
-        <argsstring>(double, double)</argsstring>
-        <name>Feff_lambda</name>
-        <qualifiedname>Perfect::Feff_lambda</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="34" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_perfect_1af427445e6f2f2afb513eb096742fca22" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Perfect::Feff_mu</definition>
-        <argsstring>(double, double)</argsstring>
-        <name>Feff_mu</name>
-        <qualifiedname>Perfect::Feff_mu</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="33" column="10"/>
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-        <type>double</type>
-        <definition>double Perfect::Flambda</definition>
-        <argsstring>(double)</argsstring>
-        <name>Flambda</name>
-        <qualifiedname>Perfect::Flambda</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="38" column="10"/>
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-        <type>double</type>
-        <definition>double Perfect::Fmu</definition>
-        <argsstring>(double)</argsstring>
-        <name>Fmu</name>
-        <qualifiedname>Perfect::Fmu</qualifiedname>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="36" column="10"/>
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-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Perfect::force</definition>
-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
-        <name>force</name>
-        <qualifiedname>Perfect::force</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="25" column="19"/>
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-        <type>void</type>
-        <definition>void Perfect::Integrals</definition>
-        <argsstring>(Phase &amp;, double *, double *, double *)</argsstring>
-        <name>Integrals</name>
-        <qualifiedname>Perfect::Integrals</qualifiedname>
-        <param>
-          <type><ref refid="class_phase" kindref="compound">Phase</ref> &amp;</type>
-        </param>
-        <param>
-          <type>double *</type>
-        </param>
-        <param>
-          <type>double *</type>
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-        <param>
-          <type>double *</type>
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-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="28" column="8"/>
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-        <type>void</type>
-        <definition>void Perfect::meridional_force</definition>
-        <argsstring>(double, double, double *, double *)</argsstring>
-        <name>meridional_force</name>
-        <qualifiedname>Perfect::meridional_force</qualifiedname>
-        <param>
-          <type>double</type>
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-        <param>
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-        <param>
-          <type>double *</type>
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-        <param>
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-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="29" column="8"/>
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-        <type>double</type>
-        <definition>double Perfect::potential</definition>
-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
-        <name>potential</name>
-        <qualifiedname>Perfect::potential</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/staeckel.H" line="26" column="10"/>
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-        <type>double</type>
-        <definition>double Perfect::second_integral</definition>
-        <argsstring>(double, double, double, double, double)</argsstring>
-        <name>second_integral</name>
-        <qualifiedname>Perfect::second_integral</qualifiedname>
-        <param>
-          <type>double</type>
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-        <param>
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-        <param>
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-        <param>
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-        <type>void</type>
-        <definition>void Perfect::set_Perfect</definition>
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-        <name>set_Perfect</name>
-        <qualifiedname>Perfect::set_Perfect</qualifiedname>
-        <param>
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-          <declname>aa</declname>
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-        <param>
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-        <references refid="class_perfect_1a6649f7890c55659d185fc593e6f87841" compoundref="staeckel_8_h" startline="9">a</references>
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-        <references refid="class_perfect_1a352135ef809687ada5638565ac66d622" compoundref="staeckel_8_h" startline="9">b</references>
-        <references refid="class_perfect_1a0b498c98fcaad321059a6b4bb2e99c75" compoundref="staeckel_8_h" startline="10">beta</references>
-        <references refid="class_perfect_1ad8f19c3ab380ef6f3c5bf27cba5dd589" compoundref="staeckel_8_h" startline="11">G</references>
-        <references refid="class_perfect_1a896e531af1ece39d761550299e9a4ae2" compoundref="staeckel_8_h" startline="11">M</references>
-        <references refid="numerical_8_h_1ad37e1b7740e725cb44517fce48e5e3ab" compoundref="numerical_8_h" startline="32">Pi</references>
-        <references refid="class_perfect_1a133252f94881eff71e139a7b81e4c67c" compoundref="staeckel_8_h" startline="12">W0</references>
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-        <definition>void Perfect::to_ellipsoidal</definition>
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-        <name>to_ellipsoidal</name>
-        <qualifiedname>Perfect::to_ellipsoidal</qualifiedname>
-        <param>
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diff --git a/doxyxml/class_periodic_b_c.xml b/doxyxml/class_periodic_b_c.xml
deleted file mode 100644
index f126826..0000000
--- a/doxyxml/class_periodic_b_c.xml
+++ /dev/null
@@ -1,516 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_periodic_b_c" kind="class" language="C++" prot="public">
-    <compoundname>PeriodicBC</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_periodic_b_c_8_h" local="no">PeriodicBC.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_periodic_b_c_1a8c2353e324cc15464be0e50f7a6ce6b4" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; PeriodicBC::atomic_weights</definition>
-        <argsstring></argsstring>
-        <name>atomic_weights</name>
-        <qualifiedname>PeriodicBC::atomic_weights</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PeriodicBC.H" line="36" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PeriodicBC.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_periodic_b_c_1ad446bf45685a01282930b21b5055202d" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string PeriodicBC::bc</definition>
-        <argsstring></argsstring>
-        <name>bc</name>
-        <qualifiedname>PeriodicBC::bc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PeriodicBC.H" line="29" column="25" bodyfile="/home/weinberg/Projects/EXP/src/PeriodicBC.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_periodic_b_c_1ac5c0d8f34aca3d1bc8637649201e372c" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* PeriodicBC::c0</definition>
-        <argsstring></argsstring>
-        <name>c0</name>
-        <qualifiedname>PeriodicBC::c0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PeriodicBC.H" line="38" column="13" bodyfile="/home/weinberg/Projects/EXP/src/PeriodicBC.H" bodystart="38" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_periodic_b_c_1a00c57bf749c8f6eeb5fceb5a77ceb3c5" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string PeriodicBC::comp_name</definition>
-        <argsstring></argsstring>
-        <name>comp_name</name>
-        <qualifiedname>PeriodicBC::comp_name</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PeriodicBC.H" line="29" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PeriodicBC.H" bodystart="29" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_periodic_b_c_1acf8ced67fe621c8e758618b5abc1c08c" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; PeriodicBC::L</definition>
-        <argsstring></argsstring>
-        <name>L</name>
-        <qualifiedname>PeriodicBC::L</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PeriodicBC.H" line="28" column="22" bodyfile="/home/weinberg/Projects/EXP/src/PeriodicBC.H" bodystart="28" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_periodic_b_c_1a2bb43d5221a2a8ce52adc07a949b46e5" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double PeriodicBC::munit</definition>
-        <argsstring></argsstring>
-        <name>munit</name>
-        <qualifiedname>PeriodicBC::munit</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PeriodicBC.H" line="33" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PeriodicBC.H" bodystart="33" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_periodic_b_c_1a933b1829dfce8e6e9dd8d58a6fcbf52e" prot="private" static="no" mutable="no">
-        <type>std::normal_distribution</type>
-        <definition>std::normal_distribution PeriodicBC::norm</definition>
-        <argsstring></argsstring>
-        <name>norm</name>
-        <qualifiedname>PeriodicBC::norm</qualifiedname>
-        <briefdescription>
-<para>Pseudorandom generation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
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-        <argsstring></argsstring>
-        <name>offset</name>
-        <qualifiedname>PeriodicBC::offset</qualifiedname>
-        <briefdescription>
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-        <qualifiedname>PeriodicBC::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
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-        </inbodydescription>
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-        <type>void</type>
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-        <briefdescription>
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-<para>Called to evaluate acceleration Default version calls the provided thread function. Can be overloaded to provide additional non-threaded tasks. </para>
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-        <briefdescription>
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-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
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-        <definition>void PeriodicBC::initialize</definition>
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-<para>Used by derived class to initialize any storage and parameters. </para>
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-        <type>void</type>
-        <definition>void PeriodicBC::userinfo</definition>
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-        <qualifiedname>PeriodicBC::userinfo</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <type></type>
-        <definition>PeriodicBC::PeriodicBC</definition>
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-<para>Constructor. </para>
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-<para>Destructor. </para>
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-<para>Enforce periodic boundary conditions in a rectangular prism (box) <parameterlist kind="param"><parameteritem>
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-<parametername>ctrname</parametername>
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-<parameterdescription>
-<para>is the name of the component whose particles will be subject to the boundary condition </para>
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-<para>is the edge size in the x-direction </para>
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diff --git a/doxyxml/class_phase.xml b/doxyxml/class_phase.xml
deleted file mode 100644
index f0df584..0000000
--- a/doxyxml/class_phase.xml
+++ /dev/null
@@ -1,1029 +0,0 @@
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-      <member refid="class_phase_1abe6c67462c9d1a6545bf5d4bb506ff75" prot="public" virt="non-virtual"><scope>Phase</scope><name>advance_symplectic</name></member>
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-      <member refid="class_phase_1a2689e2206334cae3c0607140059401cf" prot="public" virt="non-virtual"><scope>Phase</scope><name>binread</name></member>
-      <member refid="class_phase_1a4f40db300f955ada3d5323de08fa153f" prot="public" virt="non-virtual"><scope>Phase</scope><name>binwrite</name></member>
-      <member refid="class_phase_1ac7ea03f533004115aaa1378f01281546" prot="public" virt="non-virtual"><scope>Phase</scope><name>Default_Force</name></member>
-      <member refid="class_phase_1ab52c7dee040dc8dc926f6ee8c5ba9157" prot="public" virt="non-virtual"><scope>Phase</scope><name>Default_Potential</name></member>
-      <member refid="class_phase_1a552eb8b28201a3d4e02708db36757660" prot="public" virt="non-virtual"><scope>Phase</scope><name>Energy</name></member>
-      <member refid="class_phase_1a1e124ae038533aedea048a8ccf3c4356" prot="public" virt="non-virtual"><scope>Phase</scope><name>Ensemble</name></member>
-      <member refid="class_phase_1a564d630d00bd8e7cde321367220631cc" prot="public" virt="non-virtual"><scope>Phase</scope><name>Force</name></member>
-      <member refid="class_phase_1ade73c13e38f16d1ecb0a7602f2693fc8" prot="public" virt="non-virtual"><scope>Phase</scope><name>get_Integrator</name></member>
-      <member refid="class_phase_1a25f2fa8f6916442b4ecb3b1471204930" prot="public" virt="non-virtual"><scope>Phase</scope><name>get_Tolerance</name></member>
-      <member refid="class_phase_1a140a214d9f1889b16ed3c35489b56027" prot="public" virt="non-virtual"><scope>Phase</scope><name>get_Vscale</name></member>
-      <member refid="class_phase_1a2a9f6648a8164f135407d02a3afcd426" prot="public" virt="non-virtual"><scope>Phase</scope><name>get_Xscale</name></member>
-      <member refid="class_phase_1a3b7cb7864e592a0871a4e03f7141befd" prot="public" virt="non-virtual"><scope>Phase</scope><name>integrate_to</name></member>
-      <member refid="class_phase_1a616e8cbbf85642f5177dca30388850e9" prot="public" virt="non-virtual"><scope>Phase</scope><name>integrate_to_symplectic</name></member>
-      <member refid="class_phase_1ae184c430909c73551c499fab2a8b4d79" prot="protected" virt="non-virtual"><scope>Phase</scope><name>integrator</name></member>
-      <member refid="class_phase_1afcedcd1b4b0a0c85b30697cabb3c4d57" prot="protected" virt="non-virtual"><scope>Phase</scope><name>integrator_name</name></member>
-      <member refid="class_phase_1a4e02e24b93436561d9a2e32cd680902a" prot="public" virt="non-virtual"><scope>Phase</scope><name>Jacobi</name></member>
-      <member refid="class_phase_1aad2f2a73f6db7e2f17c75333060aa169" prot="protected" virt="non-virtual"><scope>Phase</scope><name>m</name></member>
-      <member refid="class_phase_1ab102729d85ee2f379e4da0676fbb626a" prot="protected" virt="non-virtual"><scope>Phase</scope><name>mapping</name></member>
-      <member refid="class_phase_1a672b70541196acc2b516bdd4b8b347aa" prot="public" virt="non-virtual"><scope>Phase</scope><name>Mass</name></member>
-      <member refid="class_phase_1a81998232b54d3abeae6299f07bcbcd21" prot="public" virt="non-virtual"><scope>Phase</scope><name>operator=</name></member>
-      <member refid="class_phase_1a77c5847003665f35e7fc374daa1b387c" prot="public" virt="non-virtual"><scope>Phase</scope><name>PC_advance</name></member>
-      <member refid="class_phase_1a84da663feab796cdcc0278a0329a0d1d" prot="public" virt="non-virtual"><scope>Phase</scope><name>Phase</name></member>
-      <member refid="class_phase_1aefcecb5376db4ef5ce73300c8478582d" prot="public" virt="non-virtual"><scope>Phase</scope><name>Phase</name></member>
-      <member refid="class_phase_1a8cf55f19efd4ee57a0b3d9c4bd9169e1" prot="public" virt="non-virtual"><scope>Phase</scope><name>Position</name></member>
-      <member refid="class_phase_1af716281647b0672847e2ef2df0c0bab5" prot="public" virt="non-virtual"><scope>Phase</scope><name>Position</name></member>
-      <member refid="class_phase_1a1148cce2c69ce12e8dcfc2cb50104df4" prot="public" virt="non-virtual"><scope>Phase</scope><name>Potential</name></member>
-      <member refid="class_phase_1a926be8ac19258cb78822e3fda918f21d" prot="protected" virt="non-virtual"><scope>Phase</scope><name>potential_defined</name></member>
-      <member refid="class_phase_1ab4cce86cfcc19eebe77b983a4eecc519" prot="public" virt="non-virtual"><scope>Phase</scope><name>print</name></member>
-      <member refid="class_phase_1ab0b36fc44cd733750c8d6455f8c04e97" prot="public" virt="non-virtual"><scope>Phase</scope><name>Register_Potential</name></member>
-      <member refid="class_phase_1a8d946f613f5a3753339126d4b74eac28" prot="public" virt="non-virtual"><scope>Phase</scope><name>rotate_frame</name></member>
-      <member refid="class_phase_1ac3240a659f385464f43ae9b941e76730" prot="public" virt="non-virtual"><scope>Phase</scope><name>rotate_view</name></member>
-      <member refid="class_phase_1a550ac46cfb9e852291e7c38e31408d6f" prot="public" virt="non-virtual"><scope>Phase</scope><name>set_Integrator</name></member>
-      <member refid="class_phase_1aeebf4ad023f48e5a2266ab55a7bcd88a" prot="public" virt="non-virtual"><scope>Phase</scope><name>set_PC</name></member>
-      <member refid="class_phase_1a4b8e3b462a682a09e22bb4eaa259eef1" prot="public" virt="non-virtual"><scope>Phase</scope><name>set_Tolerance</name></member>
-      <member refid="class_phase_1a3efe728998b33c7fd32b329d8988e7c6" prot="public" virt="non-virtual"><scope>Phase</scope><name>set_Vscale</name></member>
-      <member refid="class_phase_1a7f7d12fb13b6f8b1e88a15b8874069cc" prot="public" virt="non-virtual"><scope>Phase</scope><name>set_Xscale</name></member>
-      <member refid="class_phase_1ae99c2318c8f3d79c4e1ee9713d89447c" prot="public" virt="non-virtual"><scope>Phase</scope><name>Speed</name></member>
-      <member refid="class_phase_1aef5ce55ff9c5d82dee4c2a055b3f0670" prot="protected" virt="non-virtual"><scope>Phase</scope><name>symp_integrator_name</name></member>
-      <member refid="class_phase_1a4cf8c6b0fd4c4da034b72c6bfca09873" prot="protected" virt="non-virtual"><scope>Phase</scope><name>t</name></member>
-      <member refid="class_phase_1ae7992e406c97fe68c2edc0eee75e1d2c" prot="public" virt="non-virtual"><scope>Phase</scope><name>Time</name></member>
-      <member refid="class_phase_1a500b19be357810e4e3adb3ad41190096" prot="protected" virt="non-virtual"><scope>Phase</scope><name>tolerance</name></member>
-      <member refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" prot="protected" virt="non-virtual"><scope>Phase</scope><name>v</name></member>
-      <member refid="class_phase_1ad095adbdadb0888249219fa44cf12c3c" prot="public" virt="non-virtual"><scope>Phase</scope><name>Velocity</name></member>
-      <member refid="class_phase_1a5be0779b144b07c28ee02ea5fd0ceed5" prot="public" virt="non-virtual"><scope>Phase</scope><name>Velocity</name></member>
-      <member refid="class_phase_1ae98afcd94db7dd25d71b0808d8e26613" prot="protected" virt="non-virtual"><scope>Phase</scope><name>vscale</name></member>
-      <member refid="class_phase_1aa938fa8bd40206ea7795cc41c6d54d17" prot="protected" virt="non-virtual"><scope>Phase</scope><name>work</name></member>
-      <member refid="class_phase_1a7e1ff70b7e8972f8cb41773bcf124455" prot="public" virt="non-virtual"><scope>Phase</scope><name>Work</name></member>
-      <member refid="class_phase_1ac2eafa4f03d8c16a4aca44f74b4a967d" prot="protected" virt="non-virtual"><scope>Phase</scope><name>x</name></member>
-      <member refid="class_phase_1ab4d5d4c4dda4fc0a1b91805f17ae55a8" prot="public" virt="non-virtual"><scope>Phase</scope><name>x_return_map</name></member>
-      <member refid="class_phase_1ab4b3499d2846520ef75259d6d4846edf" prot="protected" virt="non-virtual"><scope>Phase</scope><name>xscale</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_plummer.xml b/doxyxml/class_plummer.xml
deleted file mode 100644
index 892ae4f..0000000
--- a/doxyxml/class_plummer.xml
+++ /dev/null
@@ -1,273 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_plummer" kind="class" language="C++" prot="public">
-    <compoundname>Plummer</compoundname>
-    <includes refid="models_8_h" local="no">models.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Plummer::G</definition>
-        <argsstring></argsstring>
-        <name>G</name>
-        <qualifiedname>Plummer::G</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="121" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="121" bodyend="-1"/>
-        <referencedby refid="class_plummer_1a16ea90e9a9319a175b68a933d870ff81" compoundref="models_8_h" startline="133" endline="133">set_M</referencedby>
-        <referencedby refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" compoundref="models_8_h" startline="123" endline="131">set_Plummer</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_plummer_1abcb005aba1f32212cc20cca5a0c50902" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Plummer::GM</definition>
-        <argsstring></argsstring>
-        <name>GM</name>
-        <qualifiedname>Plummer::GM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="121" column="14" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="121" bodyend="-1"/>
-        <referencedby refid="class_plummer_1a16ea90e9a9319a175b68a933d870ff81" compoundref="models_8_h" startline="133" endline="133">set_M</referencedby>
-        <referencedby refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" compoundref="models_8_h" startline="123" endline="131">set_Plummer</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Plummer::M</definition>
-        <argsstring></argsstring>
-        <name>M</name>
-        <qualifiedname>Plummer::M</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="121" column="12" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="121" bodyend="-1"/>
-        <referencedby refid="class_plummer_1a2876fc4e3134198461a375818cc817ed" compoundref="models_8_h" startline="136" endline="136">get_M</referencedby>
-        <referencedby refid="class_plummer_1a16ea90e9a9319a175b68a933d870ff81" compoundref="models_8_h" startline="133" endline="133">set_M</referencedby>
-        <referencedby refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" compoundref="models_8_h" startline="123" endline="131">set_Plummer</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Plummer::r0</definition>
-        <argsstring></argsstring>
-        <name>r0</name>
-        <qualifiedname>Plummer::r0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="120" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="120" bodyend="-1"/>
-        <referencedby refid="class_plummer_1a1ad6daa45ed07c9edc735bf174f8ef15" compoundref="models_8_h" startline="137" endline="137">get_r0</referencedby>
-        <referencedby refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" compoundref="models_8_h" startline="123" endline="131">set_Plummer</referencedby>
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-        <type>double</type>
-        <definition>double Plummer::r2</definition>
-        <argsstring></argsstring>
-        <name>r2</name>
-        <qualifiedname>Plummer::r2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="120" column="13" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="120" bodyend="-1"/>
-        <referencedby refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" compoundref="models_8_h" startline="123" endline="131">set_Plummer</referencedby>
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-        <type>double</type>
-        <definition>double Plummer::r3</definition>
-        <argsstring></argsstring>
-        <name>r3</name>
-        <qualifiedname>Plummer::r3</qualifiedname>
-        <briefdescription>
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-        <referencedby refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" compoundref="models_8_h" startline="123" endline="131">set_Plummer</referencedby>
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-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Plummer::force</definition>
-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
-        <name>force</name>
-        <qualifiedname>Plummer::force</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="140" column="19"/>
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-        <type>double</type>
-        <definition>double Plummer::get_M</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_M</name>
-        <qualifiedname>Plummer::get_M</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="136" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="136" bodyend="136"/>
-        <references refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" compoundref="models_8_h" startline="121">M</references>
-      </memberdef>
-      <memberdef kind="function" id="class_plummer_1a1ad6daa45ed07c9edc735bf174f8ef15" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Plummer::get_r0</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_r0</name>
-        <qualifiedname>Plummer::get_r0</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="137" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="137" bodyend="137"/>
-        <references refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" compoundref="models_8_h" startline="120">r0</references>
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-        <type>double</type>
-        <definition>double Plummer::potential</definition>
-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
-        <name>potential</name>
-        <qualifiedname>Plummer::potential</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="141" column="10"/>
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-        <type>void</type>
-        <definition>void Plummer::set_M</definition>
-        <argsstring>(double m)</argsstring>
-        <name>set_M</name>
-        <qualifiedname>Plummer::set_M</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
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-        <references refid="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" compoundref="models_8_h" startline="121">G</references>
-        <references refid="class_plummer_1abcb005aba1f32212cc20cca5a0c50902" compoundref="models_8_h" startline="121">GM</references>
-        <references refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" compoundref="models_8_h" startline="121">M</references>
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-        <type>void</type>
-        <definition>void Plummer::set_Plummer</definition>
-        <argsstring>(double r, double g, double m)</argsstring>
-        <name>set_Plummer</name>
-        <qualifiedname>Plummer::set_Plummer</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>g</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="123" column="8" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="123" bodyend="131"/>
-        <references refid="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" compoundref="models_8_h" startline="121">G</references>
-        <references refid="class_plummer_1abcb005aba1f32212cc20cca5a0c50902" compoundref="models_8_h" startline="121">GM</references>
-        <references refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" compoundref="models_8_h" startline="121">M</references>
-        <references refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" compoundref="models_8_h" startline="120">r0</references>
-        <references refid="class_plummer_1a52b35f16b516240494ffc0e08bb5da12" compoundref="models_8_h" startline="120">r2</references>
-        <references refid="class_plummer_1a13ea06b0837614fb5c607248294d9adb" compoundref="models_8_h" startline="120">r3</references>
-      </memberdef>
-      <memberdef kind="function" id="class_plummer_1aaddf34566682ddde31947be6bfc12837" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Plummer::set_r0</definition>
-        <argsstring>(double r)</argsstring>
-        <name>set_r0</name>
-        <qualifiedname>Plummer::set_r0</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="134" column="8" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="134" bodyend="134"/>
-        <references refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" compoundref="models_8_h" startline="120">r0</references>
-        <references refid="class_plummer_1a52b35f16b516240494ffc0e08bb5da12" compoundref="models_8_h" startline="120">r2</references>
-        <references refid="class_plummer_1a13ea06b0837614fb5c607248294d9adb" compoundref="models_8_h" startline="120">r3</references>
-      </memberdef>
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-    <detaileddescription>
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-    <location file="/home/weinberg/Projects/EXP/include/models.H" line="117" column="1" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="118" bodyend="142"/>
-    <listofallmembers>
-      <member refid="class_plummer_1a94e8e5e21cadb412388b65df80d631f2" prot="public" virt="non-virtual"><scope>Plummer</scope><name>force</name></member>
-      <member refid="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" prot="protected" virt="non-virtual"><scope>Plummer</scope><name>G</name></member>
-      <member refid="class_plummer_1a2876fc4e3134198461a375818cc817ed" prot="public" virt="non-virtual"><scope>Plummer</scope><name>get_M</name></member>
-      <member refid="class_plummer_1a1ad6daa45ed07c9edc735bf174f8ef15" prot="public" virt="non-virtual"><scope>Plummer</scope><name>get_r0</name></member>
-      <member refid="class_plummer_1abcb005aba1f32212cc20cca5a0c50902" prot="protected" virt="non-virtual"><scope>Plummer</scope><name>GM</name></member>
-      <member refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" prot="protected" virt="non-virtual"><scope>Plummer</scope><name>M</name></member>
-      <member refid="class_plummer_1a5dabf4d5417437a12bb4be656fbb0960" prot="public" virt="non-virtual"><scope>Plummer</scope><name>potential</name></member>
-      <member refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" prot="protected" virt="non-virtual"><scope>Plummer</scope><name>r0</name></member>
-      <member refid="class_plummer_1a52b35f16b516240494ffc0e08bb5da12" prot="protected" virt="non-virtual"><scope>Plummer</scope><name>r2</name></member>
-      <member refid="class_plummer_1a13ea06b0837614fb5c607248294d9adb" prot="protected" virt="non-virtual"><scope>Plummer</scope><name>r3</name></member>
-      <member refid="class_plummer_1a16ea90e9a9319a175b68a933d870ff81" prot="public" virt="non-virtual"><scope>Plummer</scope><name>set_M</name></member>
-      <member refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" prot="public" virt="non-virtual"><scope>Plummer</scope><name>set_Plummer</name></member>
-      <member refid="class_plummer_1aaddf34566682ddde31947be6bfc12837" prot="public" virt="non-virtual"><scope>Plummer</scope><name>set_r0</name></member>
-    </listofallmembers>
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-</doxygen>
diff --git a/doxyxml/class_plummer_soft.xml b/doxyxml/class_plummer_soft.xml
deleted file mode 100644
index 64a5cc0..0000000
--- a/doxyxml/class_plummer_soft.xml
+++ /dev/null
@@ -1,68 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_plummer_soft" kind="class" language="C++" prot="public">
-    <compoundname>PlummerSoft</compoundname>
-    <basecompoundref refid="class_soft_kernel" prot="public" virt="non-virtual">SoftKernel</basecompoundref>
-    <includes refid="_grav_kernel_8_h" local="no">GravKernel.H</includes>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_plummer_soft_1a32d77200041892a69f1224c98b242be7" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>std::pair&lt; double, double &gt;</type>
-        <definition>std::pair&lt; double, double &gt; PlummerSoft::operator()</definition>
-        <argsstring>(double r, double eps)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>PlummerSoft::operator()</qualifiedname>
-        <reimplements refid="class_soft_kernel_1afc1f982ae91e01ee09aff7d2d8e5a5c1">operator()</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>eps</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Main operator returning enclosed mass and gravitational potential </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/GravKernel.H" line="27" column="13"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para><ref refid="class_plummer" kindref="compound">Plummer</ref> softened gravity (infinite support) </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="1">
-        <label>PlummerSoft</label>
-        <link refid="class_plummer_soft"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>SoftKernel</label>
-        <link refid="class_soft_kernel"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="1">
-        <label>PlummerSoft</label>
-        <link refid="class_plummer_soft"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>SoftKernel</label>
-        <link refid="class_soft_kernel"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/GravKernel.H" line="21" column="1" bodyfile="/home/weinberg/Projects/EXP/src/GravKernel.H" bodystart="22" bodyend="29"/>
-    <listofallmembers>
-      <member refid="class_plummer_soft_1a32d77200041892a69f1224c98b242be7" prot="public" virt="virtual"><scope>PlummerSoft</scope><name>operator()</name></member>
-      <member refid="class_soft_kernel_1af804c372222bc2622cc472c88ac59b61" prot="public" virt="non-virtual"><scope>PlummerSoft</scope><name>tol</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_plummer_sphere.xml b/doxyxml/class_plummer_sphere.xml
deleted file mode 100644
index b054c12..0000000
--- a/doxyxml/class_plummer_sphere.xml
+++ /dev/null
@@ -1,585 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_plummer_sphere" kind="class" language="C++" prot="public">
-    <compoundname>PlummerSphere</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
-    <includes refid="plummer_8_h" local="no">plummer.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_plummer_sphere_1a9b12f5b54d3eb5cb0b043de2f9e50c59" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double PlummerSphere::dfac</definition>
-        <argsstring></argsstring>
-        <name>dfac</name>
-        <qualifiedname>PlummerSphere::dfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/plummer.H" line="16" column="10" bodyfile="/home/weinberg/Projects/EXP/include/plummer.H" bodystart="16" bodyend="-1"/>
-        <referencedby refid="class_plummer_sphere_1a1adbb81a75a56d8775991c72a06c7b8e" compoundref="plummer_8_h" startline="41" endline="43">get_density</referencedby>
-        <referencedby refid="class_plummer_sphere_1a86bcc229834769dcc528c4e8a104ab41" compoundref="plummer_8_h" startline="21" endline="32">PlummerSphere</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_plummer_sphere_1aeb86e917c5befaf750bfe1456abc5a06" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double PlummerSphere::ffac</definition>
-        <argsstring></argsstring>
-        <name>ffac</name>
-        <qualifiedname>PlummerSphere::ffac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/plummer.H" line="17" column="10" bodyfile="/home/weinberg/Projects/EXP/include/plummer.H" bodystart="17" bodyend="-1"/>
-        <referencedby refid="class_plummer_sphere_1ab95198d90d07b124d3e42689bc861f43" compoundref="plummer_8_h" startline="79" endline="81">d2fde2</referencedby>
-        <referencedby refid="class_plummer_sphere_1a5cce356c16602d5a7565829746eb4b3d" compoundref="plummer_8_h" startline="71" endline="73">dfde</referencedby>
-        <referencedby refid="class_plummer_sphere_1a046542e5c6831717f9b5bcd1cb850906" compoundref="plummer_8_h" startline="67" endline="69">distf</referencedby>
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-      <memberdef kind="variable" id="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double PlummerSphere::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>PlummerSphere::mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/plummer.H" line="14" column="10" bodyfile="/home/weinberg/Projects/EXP/include/plummer.H" bodystart="14" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double PlummerSphere::rmax</definition>
-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>PlummerSphere::rmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/plummer.H" line="12" column="10" bodyfile="/home/weinberg/Projects/EXP/include/plummer.H" bodystart="12" bodyend="-1"/>
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-      <member refid="class_axi_sym_model_1ac9a6c290463cfe45d95656d37c0c45f8" prot="public" virt="virtual"><scope>PlummerSphere</scope><name>~AxiSymModel</name></member>
-      <member refid="class_mass_model_1a95c0338ca07d1b2ea284c3c2605dc9b8" prot="public" virt="virtual"><scope>PlummerSphere</scope><name>~MassModel</name></member>
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diff --git a/doxyxml/class_point___quadrupole.xml b/doxyxml/class_point___quadrupole.xml
deleted file mode 100644
index 5ca6dae..0000000
--- a/doxyxml/class_point___quadrupole.xml
+++ /dev/null
@@ -1,90 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_point___quadrupole" kind="class" language="C++" prot="public">
-    <compoundname>Point_Quadrupole</compoundname>
-    <includes refid="models_8_h" local="no">models.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_point___quadrupole_1ad6ba4029629dc306d4042afac7eec9fb" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Point_Quadrupole::Q</definition>
-        <argsstring></argsstring>
-        <name>Q</name>
-        <qualifiedname>Point_Quadrupole::Q</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="181" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="181" bodyend="-1"/>
-        <referencedby refid="class_point___quadrupole_1a309f55c154d05750fb88ac44cc5692bc" compoundref="models_8_h" startline="183" endline="186">set_Point_Quadrupole</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_point___quadrupole_1abdf1d2cec50d31ef4e5d9031528535a2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Point_Quadrupole::force</definition>
-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
-        <name>force</name>
-        <qualifiedname>Point_Quadrupole::force</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="188" column="19"/>
-      </memberdef>
-      <memberdef kind="function" id="class_point___quadrupole_1a721c875249c387262160929ee2ab850a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Point_Quadrupole::potential</definition>
-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
-        <name>potential</name>
-        <qualifiedname>Point_Quadrupole::potential</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="187" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_point___quadrupole_1a309f55c154d05750fb88ac44cc5692bc" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Point_Quadrupole::set_Point_Quadrupole</definition>
-        <argsstring>(double q)</argsstring>
-        <name>set_Point_Quadrupole</name>
-        <qualifiedname>Point_Quadrupole::set_Point_Quadrupole</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>q</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="183" column="8" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="183" bodyend="186"/>
-        <references refid="class_point___quadrupole_1ad6ba4029629dc306d4042afac7eec9fb" compoundref="models_8_h" startline="181">Q</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/models.H" line="178" column="1" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="179" bodyend="189"/>
-    <listofallmembers>
-      <member refid="class_point___quadrupole_1abdf1d2cec50d31ef4e5d9031528535a2" prot="public" virt="non-virtual"><scope>Point_Quadrupole</scope><name>force</name></member>
-      <member refid="class_point___quadrupole_1a721c875249c387262160929ee2ab850a" prot="public" virt="non-virtual"><scope>Point_Quadrupole</scope><name>potential</name></member>
-      <member refid="class_point___quadrupole_1ad6ba4029629dc306d4042afac7eec9fb" prot="protected" virt="non-virtual"><scope>Point_Quadrupole</scope><name>Q</name></member>
-      <member refid="class_point___quadrupole_1a309f55c154d05750fb88ac44cc5692bc" prot="public" virt="non-virtual"><scope>Point_Quadrupole</scope><name>set_Point_Quadrupole</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_polar_basis.xml b/doxyxml/class_polar_basis.xml
deleted file mode 100644
index 2517510..0000000
--- a/doxyxml/class_polar_basis.xml
+++ /dev/null
@@ -1,2712 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_polar_basis" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>PolarBasis</compoundname>
-    <basecompoundref refid="class_axisymmetric_basis" prot="public" virt="non-virtual">AxisymmetricBasis</basecompoundref>
-    <derivedcompoundref refid="class_c_b_disk" prot="public" virt="non-virtual">CBDisk</derivedcompoundref>
-    <derivedcompoundref refid="class_flat_disk" prot="public" virt="non-virtual">FlatDisk</derivedcompoundref>
-    <includes refid="_polar_basis_8_h" local="no">PolarBasis.H</includes>
-    <innerclass refid="struct_polar_basis_1_1_coef_matrix" prot="protected">PolarBasis::CoefMatrix</innerclass>
-    <innerclass refid="struct_polar_basis_1_1_coef_vector" prot="protected">PolarBasis::CoefVector</innerclass>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="class_polar_basis_1a371112797397668b15ab41e65386f738" prot="public" static="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>using PolarBasis::ContribArray =  std::vector&lt;Eigen::VectorXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>ContribArray</name>
-        <qualifiedname>PolarBasis::ContribArray</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="54" column="3" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="54" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_polar_basis_1a091e218483e387313a642241e5f009da" prot="public" static="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>using PolarBasis::MatrixM =  std::vector&lt;Eigen::MatrixXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>MatrixM</name>
-        <qualifiedname>PolarBasis::MatrixM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="53" column="3" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="53" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_polar_basis_1a6c81bee92bd8e92deb3ba4ff644c8054" prot="public" static="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>using PolarBasis::VectorM =  std::vector&lt;Eigen::VectorXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>VectorM</name>
-        <qualifiedname>PolarBasis::VectorM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="52" column="3" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="52" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-type">
-      <memberdef kind="typedef" id="class_polar_basis_1aa515c0c713fdc70ba60210087b2519ec" prot="protected" static="no">
-        <type>std::shared_ptr&lt; Eigen::VectorXd &gt;</type>
-        <definition>typedef std::shared_ptr&lt;Eigen::VectorXd&gt; PolarBasis::VectorXdP</definition>
-        <argsstring></argsstring>
-        <name>VectorXdP</name>
-        <qualifiedname>PolarBasis::VectorXdP</qualifiedname>
-        <briefdescription>
-<para>Matrices per thread for obtaining expansion coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="69" column="27" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="69" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_polar_basis_1a88caee4e6225bee5a620dd123944641a" prot="protected" static="no" mutable="no">
-        <type>const unsigned int</type>
-        <definition>const unsigned int PolarBasis::cmagic</definition>
-        <argsstring></argsstring>
-        <name>cmagic</name>
-        <qualifiedname>PolarBasis::cmagic</qualifiedname>
-        <initializer>= 0xc0a57a2</initializer>
-        <briefdescription>
-<para>Coefficient magic number. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="458" column="22" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="458" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_polar_basis_1a41aced55714de2c225f7a2f19fe3b596" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool PolarBasis::coefMaster</definition>
-        <argsstring></argsstring>
-        <name>coefMaster</name>
-        <qualifiedname>PolarBasis::coefMaster</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Master node ships coefficients to hosts. True (default) implies that only the master node caches the coefficients for playback to save core memory. This is set in the config input using the &apos;coefMaster: bool&apos; parameter. Once I am sure that there are no algorithmic issues, I will remove this as an option. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="474" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="474" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_polar_basis_1a476114987ab874ce8846014720e83746" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; PolarBasis::cosm</definition>
-        <argsstring></argsstring>
-        <name>cosm</name>
-        <qualifiedname>PolarBasis::cosm</qualifiedname>
-        <briefdescription>
-<para>Work vectors for cosines for all values <computeroutput>m</computeroutput> </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="83" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="83" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_polar_basis_1af841dfe17fd179e7cad33616f9584a0c" prot="protected" static="no" mutable="no">
-        <type><ref refid="struct_polar_basis_1_1_coef_matrix" kindref="compound">CoefMatrix</ref></type>
-        <definition>CoefMatrix PolarBasis::covM</definition>
-        <argsstring></argsstring>
-        <name>covM</name>
-        <qualifiedname>PolarBasis::covM</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type><ref refid="struct_polar_basis_1_1_coef_vector" kindref="compound">CoefVector</ref></type>
-        <definition>CoefVector PolarBasis::covV</definition>
-        <argsstring></argsstring>
-        <name>covV</name>
-        <qualifiedname>PolarBasis::covV</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_polar_basis_1a79001ab9c1f4d7756828473039736910" prot="protected" static="no" mutable="no">
-        <type>CoefClasses::CylCoefs</type>
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-        <argsstring></argsstring>
-        <name>cylCoefs</name>
-        <qualifiedname>PolarBasis::cylCoefs</qualifiedname>
-        <briefdescription>
-<para>Coefficient container instance for writing HDF5. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="480" column="25" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="480" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1a08dfe64d5a1733ffe27bde9b1bf16d51" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double PolarBasis::cylmass</definition>
-        <argsstring></argsstring>
-        <name>cylmass</name>
-        <qualifiedname>PolarBasis::cylmass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="183" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="183" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1aeb57eed94e2c11e9a47ee9786b7c0b1a" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; PolarBasis::cylmass1</definition>
-        <argsstring></argsstring>
-        <name>cylmass1</name>
-        <qualifiedname>PolarBasis::cylmass1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="182" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="182" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1a24a24c5e0ab5d4a85ead71fea374f812" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned PolarBasis::defSampT</definition>
-        <argsstring></argsstring>
-        <name>defSampT</name>
-        <qualifiedname>PolarBasis::defSampT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="180" column="18" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="180" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1ae64bf3418e06d65505b66867521abb35" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd PolarBasis::dend</definition>
-        <argsstring></argsstring>
-        <name>dend</name>
-        <qualifiedname>PolarBasis::dend</qualifiedname>
-        <briefdescription>
-<para>Work matrix. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="89" column="19" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="89" bodyend="-1"/>
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-        <type>vector&lt; vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>vector&lt; vector&lt;Eigen::MatrixXd&gt; &gt; PolarBasis::differ1</definition>
-        <argsstring></argsstring>
-        <name>differ1</name>
-        <qualifiedname>PolarBasis::differ1</qualifiedname>
-        <briefdescription>
-<para>For updating levels. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="448" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="448" bodyend="-1"/>
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-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; PolarBasis::differC1</definition>
-        <argsstring></argsstring>
-        <name>differC1</name>
-        <qualifiedname>PolarBasis::differC1</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="192" column="24" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="192" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1a14b747134e7a5e92e73f2c6cb6570a14" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; PolarBasis::differS1</definition>
-        <argsstring></argsstring>
-        <name>differS1</name>
-        <qualifiedname>PolarBasis::differS1</qualifiedname>
-        <briefdescription>
-<para>For updating levels. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="192" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="192" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1a90e8f6bee803544cedde1c5334540808" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; PolarBasis::dpotR</definition>
-        <argsstring></argsstring>
-        <name>dpotR</name>
-        <qualifiedname>PolarBasis::dpotR</qualifiedname>
-        <briefdescription>
-<para>Matrices per thread for obtaining derivative of potential field. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="65" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="65" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1ad1b9268b7f03dcbb53afb51d15595875" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; PolarBasis::dpotZ</definition>
-        <argsstring></argsstring>
-        <name>dpotZ</name>
-        <qualifiedname>PolarBasis::dpotZ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="65" column="21" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="65" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1a8296f5a47fc5b64f7ca3bd40629996af" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool PolarBasis::EVEN_M</definition>
-        <argsstring></argsstring>
-        <name>EVEN_M</name>
-        <qualifiedname>PolarBasis::EVEN_M</qualifiedname>
-        <briefdescription>
-<para>Flag use of even m harmonics only. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="413" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="413" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1a15d95a42911345cf8a447f8b87dc0db4" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; <ref refid="class_polar_basis_1aa515c0c713fdc70ba60210087b2519ec" kindref="member">VectorXdP</ref> &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;VectorXdP&gt; &gt; PolarBasis::expcoef0</definition>
-        <argsstring></argsstring>
-        <name>expcoef0</name>
-        <qualifiedname>PolarBasis::expcoef0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="70" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="70" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool PolarBasis::firstime_accel</definition>
-        <argsstring></argsstring>
-        <name>firstime_accel</name>
-        <qualifiedname>PolarBasis::firstime_accel</qualifiedname>
-        <briefdescription>
-<para>Flag whether or not work space has been initialized for acceleration. </para>
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-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="126" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="126" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool PolarBasis::firstime_coef</definition>
-        <argsstring></argsstring>
-        <name>firstime_coef</name>
-        <qualifiedname>PolarBasis::firstime_coef</qualifiedname>
-        <briefdescription>
-<para>Flag whether or not work space has been initialized for coefficients. </para>
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-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="123" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="123" bodyend="-1"/>
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-        <type>std::vector&lt; unsigned &gt;</type>
-        <definition>std::vector&lt;unsigned&gt; PolarBasis::howmany</definition>
-        <argsstring></argsstring>
-        <name>howmany</name>
-        <qualifiedname>PolarBasis::howmany</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="138" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="138" bodyend="-1"/>
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-        <type>std::vector&lt; std::vector&lt; unsigned &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;unsigned&gt; &gt; PolarBasis::howmany1</definition>
-        <argsstring></argsstring>
-        <name>howmany1</name>
-        <qualifiedname>PolarBasis::howmany1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="137" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="137" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1a06f152b6310fa7f859ca24ee5124cda5" prot="protected" static="no" mutable="no">
-        <type>bool</type>
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-        <name>is_flat</name>
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-        <briefdescription>
-<para>Model is flat. </para>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="120" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="120" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double PolarBasis::lastPlayTime</definition>
-        <argsstring></argsstring>
-        <name>lastPlayTime</name>
-        <qualifiedname>PolarBasis::lastPlayTime</qualifiedname>
-        <briefdescription>
-<para>Last playback coefficient evaluation time. </para>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="477" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="477" bodyend="-1"/>
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-        <type>bool</type>
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-        <argsstring></argsstring>
-        <name>M0_back</name>
-        <qualifiedname>PolarBasis::M0_back</qualifiedname>
-        <briefdescription>
-<para>Flag fixed monopole. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="419" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="419" bodyend="-1"/>
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-        <type>bool</type>
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-        <argsstring></argsstring>
-        <name>M0_only</name>
-        <qualifiedname>PolarBasis::M0_only</qualifiedname>
-        <briefdescription>
-<para>Use axisymmetric terms. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="416" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="416" bodyend="-1"/>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; PolarBasis::massT</definition>
-        <argsstring></argsstring>
-        <name>massT</name>
-        <qualifiedname>PolarBasis::massT</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="179" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="179" bodyend="-1"/>
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-        <type>std::vector&lt; std::vector&lt; double &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;double&gt; &gt; PolarBasis::massT1</definition>
-        <argsstring></argsstring>
-        <name>massT1</name>
-        <qualifiedname>PolarBasis::massT1</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="177" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="177" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double PolarBasis::maxSNR</definition>
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-        <name>maxSNR</name>
-        <qualifiedname>PolarBasis::maxSNR</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="184" column="17" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="184" bodyend="-1"/>
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-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd PolarBasis::meanC</definition>
-        <argsstring></argsstring>
-        <name>meanC</name>
-        <qualifiedname>PolarBasis::meanC</qualifiedname>
-        <briefdescription>
-<para>Expected coefficient values for RMS noise computation. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="422" column="19" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="422" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double PolarBasis::minSNR</definition>
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-        <name>minSNR</name>
-        <qualifiedname>PolarBasis::minSNR</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="184" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="184" bodyend="-1"/>
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-        <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-        <definition>MixtureBasis* PolarBasis::mix</definition>
-        <argsstring></argsstring>
-        <name>mix</name>
-        <qualifiedname>PolarBasis::mix</qualifiedname>
-        <briefdescription>
-<para>For massive satellite simulations. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="461" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="461" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int PolarBasis::mlim</definition>
-        <argsstring></argsstring>
-        <name>mlim</name>
-        <qualifiedname>PolarBasis::mlim</qualifiedname>
-        <briefdescription>
-<para>Maximum harmonic order restriction. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="389" column="7" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="389" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_polar_basis_1ad61c596489b46678f2e70e454921d0d3" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double PolarBasis::muse0</definition>
-        <argsstring></argsstring>
-        <name>muse0</name>
-        <qualifiedname>PolarBasis::muse0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>vector&lt; double &gt;</type>
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-        <name>muse1</name>
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-        <briefdescription>
-<para>Mass accumulation for PCA. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>bool</type>
-        <definition>bool PolarBasis::NO_M0</definition>
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-        <name>NO_M0</name>
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-        <briefdescription>
-<para>Omit monopole. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="404" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="404" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool PolarBasis::NO_M1</definition>
-        <argsstring></argsstring>
-        <name>NO_M1</name>
-        <qualifiedname>PolarBasis::NO_M1</qualifiedname>
-        <briefdescription>
-<para>Flag drop m=1 term. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="410" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="410" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool PolarBasis::NO_MONO</definition>
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-        <name>NO_MONO</name>
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-        <briefdescription>
-<para>Omit off-grid force algorithm. </para>
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-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="407" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="407" bodyend="-1"/>
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-        <type>std::normal_distribution</type>
-        <definition>std::normal_distribution PolarBasis::nrand</definition>
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-        <name>nrand</name>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="431" column="4" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="431" bodyend="-1"/>
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-        <type>std::vector&lt; unsigned &gt;</type>
-        <definition>std::vector&lt;unsigned&gt; PolarBasis::numbT</definition>
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-        <name>numbT</name>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="178" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="178" bodyend="-1"/>
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-        <type>std::vector&lt; std::vector&lt; unsigned &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;unsigned&gt; &gt; PolarBasis::numbT1</definition>
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-        <name>numbT1</name>
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-        </briefdescription>
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-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt; double &gt; PolarBasis::pack</definition>
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-        <name>pack</name>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="449" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="449" bodyend="-1"/>
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-        <type>std::shared_ptr&lt; CoefClasses::CylCoefs &gt;</type>
-        <definition>std::shared_ptr&lt;CoefClasses::CylCoefs&gt; PolarBasis::playback</definition>
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-        <name>playback</name>
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-        <detaileddescription>
-<para>Coefficient playback instance. Using shared_ptr to avoid constructing a simple pointer or null instance </para>
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-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; PolarBasis::potd</definition>
-        <argsstring></argsstring>
-        <name>potd</name>
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-<para>Matrices per thread for obtaining potential field. </para>
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-        <type>double</type>
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-        <name>resetT</name>
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-        <briefdescription>
-<para><ref refid="class_time" kindref="compound">Time</ref> at last multistep reset. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="80" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="80" bodyend="-1"/>
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-        <type>std::mt19937</type>
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-        <argsstring></argsstring>
-        <name>rgen</name>
-        <qualifiedname>PolarBasis::rgen</qualifiedname>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="430" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="430" bodyend="-1"/>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>PolarBasis::rmax</qualifiedname>
-        <briefdescription>
-<para>The maximum radius. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="398" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="398" bodyend="-1"/>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>rmin</name>
-        <qualifiedname>PolarBasis::rmin</qualifiedname>
-        <briefdescription>
-<para>The minimum radius. </para>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
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-        <type>Eigen::MatrixXd</type>
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-        <argsstring></argsstring>
-        <name>rmsC</name>
-        <qualifiedname>PolarBasis::rmsC</qualifiedname>
-        <briefdescription>
-<para>Expected squared coefficient values for RMS noise computation. </para>
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-        <type>unsigned</type>
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-        <qualifiedname>PolarBasis::sampT</qualifiedname>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
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-        <name>scale</name>
-        <qualifiedname>PolarBasis::scale</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_basis" kindref="compound">Basis</ref> linear scale for mapping. </para>
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-        <type>unsigned int</type>
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-        <argsstring></argsstring>
-        <name>seedN</name>
-        <qualifiedname>PolarBasis::seedN</qualifiedname>
-        <briefdescription>
-<para>Pseudorandom generation. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="429" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="429" bodyend="-1"/>
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-        <type>bool</type>
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-<para>Flag self_consitency. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="401" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="401" bodyend="-1"/>
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-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
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-        <name>sinm</name>
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-<para>Work vectors for sines for all values <computeroutput>m</computeroutput> </para>
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-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="86" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="86" bodyend="-1"/>
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-<para>Subsample fraction of particles. </para>
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-<para>Flag to use subset. </para>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
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-        <name>u</name>
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-<para>Work vectors to make recursion evaluations thread safe. </para>
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-        <type>vector&lt; double &gt;</type>
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-        <name>unpack</name>
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-        <inbodydescription>
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-        <name>vc</name>
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-        <inbodydescription>
-        </inbodydescription>
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-        <name>vs</name>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
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-        <name>workC</name>
-        <qualifiedname>PolarBasis::workC</qualifiedname>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="193" column="22" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="193" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>workC1</name>
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-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
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-        <argsstring></argsstring>
-        <name>workS</name>
-        <qualifiedname>PolarBasis::workS</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="193" column="35" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="193" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_polar_basis_1a9ca96eb5c70ca2b17032fe5a2c0f813c" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; PolarBasis::workS1</definition>
-        <argsstring></argsstring>
-        <name>workS1</name>
-        <qualifiedname>PolarBasis::workS1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="193" column="28" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="193" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-static-attrib">
-      <memberdef kind="variable" id="class_polar_basis_1adfedd329d82bf29612dc7effb68d6527" prot="protected" static="yes" mutable="no">
-        <type>pthread_mutex_t</type>
-        <definition>pthread_mutex_t PolarBasis::cos_coef_lock</definition>
-        <argsstring></argsstring>
-        <name>cos_coef_lock</name>
-        <qualifiedname>PolarBasis::cos_coef_lock</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="487" column="36" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="487" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_polar_basis_1a50c1a4d646f89ac3d9d07e9700a9ead1" prot="protected" static="yes" mutable="no">
-        <type>pthread_mutex_t</type>
-        <definition>pthread_mutex_t PolarBasis::sin_coef_lock</definition>
-        <argsstring></argsstring>
-        <name>sin_coef_lock</name>
-        <qualifiedname>PolarBasis::sin_coef_lock</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="487" column="50" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="487" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_polar_basis_1a1e8407fa2d119488c94015b74b977e37" prot="protected" static="yes" mutable="no">
-        <type>pthread_mutex_t</type>
-        <definition>pthread_mutex_t PolarBasis::used_lock</definition>
-        <argsstring></argsstring>
-        <name>used_lock</name>
-        <qualifiedname>PolarBasis::used_lock</qualifiedname>
-        <briefdescription>
-<para>Mutexes for multithreading. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="487" column="26" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="487" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_polar_basis_1a80f934a93cbe526d28c6f8787b31b729" prot="protected" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; PolarBasis::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>PolarBasis::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="483" column="25" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="483" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_polar_basis_1ae3e10d1d2db082490f8a28b32915def5" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool PolarBasis::NewCoefs</definition>
-        <argsstring></argsstring>
-        <name>NewCoefs</name>
-        <qualifiedname>PolarBasis::NewCoefs</qualifiedname>
-        <briefdescription>
-<para>Use YAML header in coefficient file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="493" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="493" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-func">
-      <memberdef kind="function" id="class_polar_basis_1a89ded72802c057e9900f24d493f9dce3" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>std::tuple&lt; double, double, double &gt;</type>
-        <definition>virtual std::tuple&lt; double, double, double &gt; PolarBasis::background</definition>
-        <argsstring>(double r, double z)</argsstring>
-        <name>background</name>
-        <qualifiedname>PolarBasis::background</qualifiedname>
-        <reimplementedby refid="class_c_b_disk_1a82d0b59e367b9d8f65feea21bcc2b921">background</reimplementedby>
-        <reimplementedby refid="class_flat_disk_1a7605820abb7e8222f48e04c25209f20b">background</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>CUDA method for coefficient accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Background evaluation </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="383" column="3" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="383" bodyend="383"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1ac71935d93632a102114d3f7d3cc52656" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::check_range</definition>
-        <argsstring>()</argsstring>
-        <name>check_range</name>
-        <qualifiedname>PolarBasis::check_range</qualifiedname>
-        <briefdescription>
-<para>Provided by derived classes to check consistency. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="95" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1ab837dfe291f4c04c498805ad3d7899a5" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PolarBasis::compute_multistep_coefficients</definition>
-        <argsstring>()</argsstring>
-        <name>compute_multistep_coefficients</name>
-        <qualifiedname>PolarBasis::compute_multistep_coefficients</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Extrapolate and sum coefficents per multistep level to get a complete set of coefficients for force evaluation at an intermediate time step </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="444" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1acaba49129ac6aeeb0d44e1ff25eb4e22" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>virtual void * PolarBasis::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>PolarBasis::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Thread method for accerlation compuation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="386" column="17"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a3433ec168c294734e038b126ef4be6f1" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::determine_coefficients_particles</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients_particles</name>
-        <qualifiedname>PolarBasis::determine_coefficients_particles</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Compute the coefficients from particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="132" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a64b464f89b72cc7755f75e828a9a6a87" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::determine_coefficients_playback</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients_playback</name>
-        <qualifiedname>PolarBasis::determine_coefficients_playback</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Compute the coefficients from an table. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="135" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a45f4b62afcdfcfcefdfefdbcab34e754" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>virtual void * PolarBasis::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
-        <qualifiedname>PolarBasis::determine_coefficients_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49">determine_coefficients_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Thread method for coefficient accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="129" column="17"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a2ab3b12283586fff2210ef28df12f834" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PolarBasis::dump_coefs_all</definition>
-        <argsstring>(ostream &amp;)</argsstring>
-        <name>dump_coefs_all</name>
-        <qualifiedname>PolarBasis::dump_coefs_all</qualifiedname>
-        <param>
-          <type>ostream &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Dump current coefficients (all multistep levels) For debugging . . . </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="455" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a4ccfeea60a5f68a4f7b3a5034f4e3d1d" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PolarBasis::get_dens_coefs</definition>
-        <argsstring>(int m, Eigen::VectorXd &amp;coef, double &amp;p)</argsstring>
-        <name>get_dens_coefs</name>
-        <qualifiedname>PolarBasis::get_dens_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Get density from coefficient vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="117" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1adacb1bb523e1ed452d7075cf6b97135f" prot="protected" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;Vc, Eigen::MatrixXd &amp;Vs, double r, double z)=0</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>PolarBasis::get_pot</qualifiedname>
-        <reimplementedby refid="class_c_b_disk_1a14ea57104484741b6934b807e1505e3d">get_pot</reimplementedby>
-        <reimplementedby refid="class_flat_disk_1a4d17639bc22514aa13b0c20ddc62c315">get_pot</reimplementedby>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>Vc</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>Vs</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="188" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1ae13b2d394784b9344d9ec473c5f2d781" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PolarBasis::get_pot_coefs</definition>
-        <argsstring>(int m, const Eigen::VectorXd &amp;coef, double &amp;p, double &amp;dpr, double &amp;dprz)</argsstring>
-        <name>get_pot_coefs</name>
-        <qualifiedname>PolarBasis::get_pot_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dpr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dprz</declname>
-        </param>
-        <briefdescription>
-<para>Get potential and accel field values from coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="108" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1af5eabfde1ceca1aab0df39bf82bd99c3" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PolarBasis::get_pot_coefs_safe</definition>
-        <argsstring>(int m, const Eigen::VectorXd &amp;coef, double &amp;p, double &amp;dpr, double &amp;dprz, Eigen::MatrixXd &amp;potd1, Eigen::MatrixXd &amp;dpotr1, Eigen::MatrixXd &amp;dpotz1)</argsstring>
-        <name>get_pot_coefs_safe</name>
-        <qualifiedname>PolarBasis::get_pot_coefs_safe</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dpr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dprz</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>potd1</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpotr1</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpotz1</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get potential and field values from coefficients (provide workspace for thread safety) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="112" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1adfeabbff17849499d42172409cde90ee" prot="protected" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double PolarBasis::getRtable</definition>
-        <argsstring>()=0</argsstring>
-        <name>getRtable</name>
-        <qualifiedname>PolarBasis::getRtable</qualifiedname>
-        <reimplementedby refid="class_c_b_disk_1ada5af15d64a58e2ad1125b21b518704e">getRtable</reimplementedby>
-        <reimplementedby refid="class_flat_disk_1a60547addec40a8e202c206ff94497843">getRtable</reimplementedby>
-        <briefdescription>
-<para>Get table scale. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="198" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a8c667278622aeb6f65dde13da207db7f" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PolarBasis::init_pca</definition>
-        <argsstring>()</argsstring>
-        <name>init_pca</name>
-        <qualifiedname>PolarBasis::init_pca</qualifiedname>
-        <briefdescription>
-<para>Initialize for PCA variance computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="102" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a5b49aa8ebe308a9f089b52478ee4db11" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>PolarBasis::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <reimplementedby refid="class_c_b_disk_1a5ad6907893c4b46cf8a74737a70e02fa">initialize</reimplementedby>
-        <reimplementedby refid="class_flat_disk_1a99ce7aa447bc828ce26a69cf18136556">initialize</reimplementedby>
-        <briefdescription>
-<para>Initialize method. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="92" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a346801a54ca434a9f63809bfbbf53f82" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void PolarBasis::setup</definition>
-        <argsstring>()</argsstring>
-        <name>setup</name>
-        <qualifiedname>PolarBasis::setup</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Should be called by derived classes after initialization (does nothing here) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="99" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="99" bodyend="99"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1af82e9d72d652c4babad6846229afbbe4" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PolarBasis::setup_accumulation</definition>
-        <argsstring>(int mlevel)</argsstring>
-        <name>setup_accumulation</name>
-        <qualifiedname>PolarBasis::setup_accumulation</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>mlevel</declname>
-        </param>
-        <briefdescription>
-<para>Clear arrays for accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="105" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_polar_basis_1acb8cf13811dc3e6d8556b70d00a4d8c6" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::determine_acceleration_and_potential</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>PolarBasis::determine_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_basis_1abb4dbfbe9c234f44b1719a4d89dc3951">determine_acceleration_and_potential</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Required member to compute accleration and potential with threading. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>The thread member must be supplied by the derived class </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="518" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a6e26e359a05e6860626196e156475b6b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::determine_coefficients</definition>
-        <argsstring>(Component *c)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>PolarBasis::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724">determine_coefficients</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>Compute coefficients with threading using the provided component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="513" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="513" bodyend="514"/>
-        <references refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" compoundref="_pot_accel_8_h" startline="59">PotAccel::cC</references>
-        <references refid="class_polar_basis_1ad124f3ba09e1b792053c736294f6ddb7">determine_coefficients</references>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1ad124f3ba09e1b792053c736294f6ddb7" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::determine_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>PolarBasis::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Required member to compute coeifficients with threading. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>The thread member must be supplied by the derived class </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="510" column="16"/>
-        <referencedby refid="class_polar_basis_1a6e26e359a05e6860626196e156475b6b" compoundref="_polar_basis_8_h" startline="513" endline="514">determine_coefficients</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a05e6a24b91fd7c8239bffa2df1bb9004" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void PolarBasis::determine_fields_at_point</definition>
-        <argsstring>(double x, double y, double z, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotx, double *tpoty, double *tpotz)</argsstring>
-        <name>determine_fields_at_point</name>
-        <qualifiedname>PolarBasis::determine_fields_at_point</qualifiedname>
-        <reimplements refid="class_basis_1a8d4bece8ddfe81223177e63d76779284">determine_fields_at_point</reimplements>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotx</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpoty</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in Cartesian coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="583" column="9"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1aeef7e49e923b2a7bd510c99f10cdb19e" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void PolarBasis::determine_fields_at_point_cyl</definition>
-        <argsstring>(double r, double z, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpotz, double *tpotp)</argsstring>
-        <name>determine_fields_at_point_cyl</name>
-        <qualifiedname>PolarBasis::determine_fields_at_point_cyl</qualifiedname>
-        <reimplements refid="class_basis_1a3bcc5e3250f82d0ce476b096eabf342a">determine_fields_at_point_cyl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-<para>Returns the potential, its derivatives &amp; density in cylindrical coords. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="597" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a4d396e0af9e54f2f09009f05a5d95672" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void PolarBasis::determine_fields_at_point_sph</definition>
-        <argsstring>(double r, double theta, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpott, double *tpotp)</argsstring>
-        <name>determine_fields_at_point_sph</name>
-        <qualifiedname>PolarBasis::determine_fields_at_point_sph</qualifiedname>
-        <reimplements refid="class_basis_1a34f7d4340bcd0c5452f430cebf5c3665">determine_fields_at_point_sph</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>theta</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpott</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-<para>Returns the potential, its derivatives &amp; density in spherical coords. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="590" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a4326226fbd3814c1b159c9a8d1714dc9" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void PolarBasis::dump_coefs</definition>
-        <argsstring>(ostream &amp;)</argsstring>
-        <name>dump_coefs</name>
-        <qualifiedname>PolarBasis::dump_coefs</qualifiedname>
-        <reimplements refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf">dump_coefs</reimplements>
-        <param>
-          <type>ostream &amp;</type>
-        </param>
-        <briefdescription>
-<para>Dump current coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="606" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1aa99664ea268f363763f3577416ae367c" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void PolarBasis::dump_coefs_h5</definition>
-        <argsstring>(const std::string &amp;file)</argsstring>
-        <name>dump_coefs_h5</name>
-        <qualifiedname>PolarBasis::dump_coefs_h5</qualifiedname>
-        <reimplements refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c">dump_coefs_h5</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-<para>Dump current coefficients into named HDF5 file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="609" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1af3ccc880f0cc299abc8c603c7e9778e9" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::get_acceleration_and_potential</definition>
-        <argsstring>(Component *cC)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>PolarBasis::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>cC</declname>
-        </param>
-        <briefdescription>
-<para>Required member to compute accelration and potential. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>This implemenation should be fine for most cases </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="506" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a7e4f51d9a6cb765a29e4a90c6020b3fe" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::get_dens</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;d, int tid)=0</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>PolarBasis::get_dens</qualifiedname>
-        <reimplementedby refid="class_c_b_disk_1aee6e15ba0b5c67150d23e0dc720fa2b3">get_dens</reimplementedby>
-        <reimplementedby refid="class_flat_disk_1a661d3b56742b8816e6ddb5ef60a1764d">get_dens</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="567" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a35dcc79a47abe1c6de84dbdb9203896d" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::get_dpotl</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dpr, Eigen::MatrixXd &amp;dpz, int tid)=0</argsstring>
-        <name>get_dpotl</name>
-        <qualifiedname>PolarBasis::get_dpotl</qualifiedname>
-        <reimplementedby refid="class_c_b_disk_1a38663aa86ab5a642b78a2ab929584181">get_dpotl</reimplementedby>
-        <reimplementedby refid="class_flat_disk_1a22f0831bd87fafebf499abc0556c0d60">get_dpotl</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpr</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpz</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dpr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dpz</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="544" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a5bd90a17ffb1b1f7e06fdb9a9861b9e9" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::get_potl</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, int tid)=0</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>PolarBasis::get_potl</qualifiedname>
-        <reimplementedby refid="class_c_b_disk_1a8ac1e7c2a2efee6990cc31ca6c53f9a1">get_potl</reimplementedby>
-        <reimplementedby refid="class_flat_disk_1adfae4fe4709805480d401787378b14ef">get_potl</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>z</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation height </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="556" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1ae897c7f6610ad01ab9c69d47e836d3dd" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::get_potl_dens</definition>
-        <argsstring>(double r, double z, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;d, int tid)=0</argsstring>
-        <name>get_potl_dens</name>
-        <qualifiedname>PolarBasis::get_potl_dens</qualifiedname>
-        <reimplementedby refid="class_c_b_disk_1a1dd056d9fc6501b320a84ad51bf58771">get_potl_dens</reimplementedby>
-        <reimplementedby refid="class_flat_disk_1a9fbcdede578288260d155e0033de33d1">get_potl_dens</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get the potential and density <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="579" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a74b322e6f5894af06076c62f7a3e9a87" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double PolarBasis::knl</definition>
-        <argsstring>(int, int)</argsstring>
-        <name>knl</name>
-        <qualifiedname>PolarBasis::knl</qualifiedname>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <briefdescription>
-<para>Kernel value for recursion relation basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="603" column="18" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="603" bodyend="603"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a176f79dfddda7dae31a595259abf797b" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::multistep_reset</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_reset</name>
-        <qualifiedname>PolarBasis::multistep_reset</qualifiedname>
-        <reimplements refid="class_axisymmetric_basis_1a93d8a3c0e104139477fec734a6baf8e6">multistep_reset</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step coefficient table when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="525" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1abd587da712635ad6b559671f10fa5b32" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::multistep_update</definition>
-        <argsstring>(int cur, int next, Component *c, int i, int id)</argsstring>
-        <name>multistep_update</name>
-        <qualifiedname>PolarBasis::multistep_update</qualifiedname>
-        <reimplements refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a">multistep_update</reimplements>
-        <param>
-          <type>int</type>
-          <declname>cur</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>next</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-<para>Implementation of level shifts. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="527" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1ad8614d1a76923db9331a1080fdc7cf2b" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::multistep_update_begin</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_begin</name>
-        <qualifiedname>PolarBasis::multistep_update_begin</qualifiedname>
-        <reimplements refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381">multistep_update_begin</reimplements>
-        <briefdescription>
-<para>Execute to begin level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step force algorithm when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="526" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1aea28de3f69eb403dab0bd5049e71d04e" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PolarBasis::multistep_update_finish</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_finish</name>
-        <qualifiedname>PolarBasis::multistep_update_finish</qualifiedname>
-        <reimplements refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e">multistep_update_finish</reimplements>
-        <briefdescription>
-<para>Execute to finish level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="528" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1a45940af63c3a13154e29504458495c9d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>PolarBasis::PolarBasis</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf, MixtureBasis *m=0)</argsstring>
-        <name>PolarBasis</name>
-        <qualifiedname>PolarBasis::PolarBasis</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <param>
-          <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-          <declname>m</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-<para>Constructor (<computeroutput>line</computeroutput> contains the paramter list) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="496" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1aaa494cc1d1daa18fc49e97afc5921df0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>PolarBasis::PolarBasis</definition>
-        <argsstring>(const PolarBasis &amp;p)</argsstring>
-        <name>PolarBasis</name>
-        <qualifiedname>PolarBasis::PolarBasis</qualifiedname>
-        <param>
-          <type>const <ref refid="class_polar_basis" kindref="compound">PolarBasis</ref> &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Copy constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="499" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_polar_basis_1aea22978a077e0f22f369e48e96ef6af1" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual PolarBasis::~PolarBasis</definition>
-        <argsstring>()</argsstring>
-        <name>~PolarBasis</name>
-        <qualifiedname>PolarBasis::~PolarBasis</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="502" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Defines a cylindrical basis with members specific to polar symmetry</para>
-<para>Configurable parameters:</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>scale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the characterisic scale of the basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum radius of the basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radius of the basis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>self_consistent</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true for updating the the coefficients at time steps </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>NO_M0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true to omit the m=0 harmonic (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>NO_M1</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true to omit the m=1 harmonic (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>NO_MONO</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true to omit the monopole off-grid force algorithm (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>EVEN_M</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true to include only even m harmonics (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>M0_ONLY</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true to include only the m=0 harmonic (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>M0_BACK</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true includes fixed m=0 harmonic (default: false) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ssfrac</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set &gt; 0.0 to compute a fraction of particles only </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>playback</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true to replay from a coefficient file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>coefMaster</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true to have only the root node read and distribute the coefficients</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Other parameters may be defined and passed to any derived classes in addition to these. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>CBDisk</label>
-        <link refid="class_c_b_disk"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>FlatDisk</label>
-        <link refid="class_flat_disk"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>PolarBasis</label>
-        <link refid="class_polar_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="9" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="14">
-        <label>MixtureBasis</label>
-        <link refid="class_mixture_basis"/>
-        <childnode refid="15" relation="usage">
-          <edgelabel>p</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="8" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>PolarBasis</label>
-        <link refid="class_polar_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="10" relation="usage">
-          <edgelabel>covV</edgelabel>
-        </childnode>
-        <childnode refid="12" relation="usage">
-          <edgelabel>covM</edgelabel>
-        </childnode>
-        <childnode refid="14" relation="usage">
-          <edgelabel>mix</edgelabel>
-        </childnode>
-      </node>
-      <node id="12">
-        <label>PolarBasis::CoefMatrix</label>
-        <link refid="struct_polar_basis_1_1_coef_matrix"/>
-        <childnode refid="13" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>PolarBasis::CoefVector</label>
-        <link refid="struct_polar_basis_1_1_coef_vector"/>
-        <childnode refid="11" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="9">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="15">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>exp_in</edgelabel>
-          <edgelabel>exp_out</edgelabel>
-        </childnode>
-        <childnode refid="14" relation="usage">
-          <edgelabel>mix_in</edgelabel>
-          <edgelabel>mix_out</edgelabel>
-        </childnode>
-      </node>
-      <node id="13">
-        <label>std::vector&lt; std::vector&lt; MatrixM &gt; &gt;</label>
-      </node>
-      <node id="11">
-        <label>std::vector&lt; std::vector&lt; VectorM &gt; &gt;</label>
-      </node>
-      <node id="5">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/PolarBasis.H" line="47" column="1" bodyfile="/home/weinberg/Projects/EXP/src/PolarBasis.H" bodystart="48" bodyend="610"/>
-    <listofallmembers>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>PolarBasis</scope><name>atol</name></member>
-      <member refid="class_axisymmetric_basis_1ab965e325410d79d567903f51dd2c6dd0" prot="public" virt="non-virtual"><scope>PolarBasis</scope><name>AxisymmetricBasis</name></member>
-      <member refid="class_axisymmetric_basis_1aa4fc18ccf44bdf56ac60b7caa68b1cfc" prot="private" virt="non-virtual"><scope>PolarBasis</scope><name>b_Hall</name></member>
-      <member refid="class_polar_basis_1a89ded72802c057e9900f24d493f9dce3" prot="protected" virt="virtual"><scope>PolarBasis</scope><name>background</name></member>
-      <member refid="class_basis_1a3deeb360a898d1c144f7f6ad44813b3e" prot="public" virt="non-virtual"><scope>PolarBasis</scope><name>Basis</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>cC</name></member>
-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>PolarBasis</scope><name>cc_lock</name></member>
-      <member refid="class_polar_basis_1ac71935d93632a102114d3f7d3cc52656" prot="protected" virt="virtual"><scope>PolarBasis</scope><name>check_range</name></member>
-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>PolarBasis</scope><name>ClearExternal</name></member>
-      <member refid="class_polar_basis_1a88caee4e6225bee5a620dd123944641a" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>cmagic</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>coef_dump</name></member>
-      <member refid="class_polar_basis_1a41aced55714de2c225f7a2f19fe3b596" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>coefMaster</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>PolarBasis</scope><name>compute</name></member>
-      <member refid="class_polar_basis_1ab837dfe291f4c04c498805ad3d7899a5" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>compute_multistep_coefficients</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>conf</name></member>
-      <member refid="class_polar_basis_1a371112797397668b15ab41e65386f738" prot="public" virt="non-virtual"><scope>PolarBasis</scope><name>ContribArray</name></member>
-      <member refid="class_polar_basis_1adfedd329d82bf29612dc7effb68d6527" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>cos_coef_lock</name></member>
-      <member refid="class_polar_basis_1a476114987ab874ce8846014720e83746" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>cosm</name></member>
-      <member refid="class_axisymmetric_basis_1a7bd4492f833f728f99891d38b7493631" prot="private" virt="non-virtual"><scope>PolarBasis</scope><name>covar</name></member>
-      <member refid="class_polar_basis_1af841dfe17fd179e7cad33616f9584a0c" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>covM</name></member>
-      <member refid="class_polar_basis_1acf405ea76324f560aa152c596de1228c" prot="protected" virt="non-virtual"><scope>PolarBasis</scope><name>covV</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>PolarBasis</scope><name>cube</name></member>
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diff --git a/doxyxml/class_poly.xml b/doxyxml/class_poly.xml
deleted file mode 100644
index 5576ba9..0000000
--- a/doxyxml/class_poly.xml
+++ /dev/null
@@ -1,469 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_poly" kind="class" language="C++" prot="public">
-    <compoundname>Poly</compoundname>
-    <basecompoundref prot="public" virt="non-virtual">Eigen::VectorXd</basecompoundref>
-    <includes refid="poly_8_h" local="no">poly.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_poly_1a20d36d5470f8ee069b547dbe2f98ba4d" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Poly::order</definition>
-        <argsstring></argsstring>
-        <name>order</name>
-        <qualifiedname>Poly::order</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/poly.H" line="15" column="7" bodyfile="/home/weinberg/Projects/EXP/include/poly.H" bodystart="15" bodyend="-1"/>
-        <referencedby refid="class_poly_1ac6d1975152b5060a30b666cbc5572218" compoundref="poly_8_h" startline="36" endline="36">getorder</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_poly_1ac92157cc1d9266b044c50ebcb31cfa16" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Poly::reduce_order</definition>
-        <argsstring>(void)</argsstring>
-        <name>reduce_order</name>
-        <qualifiedname>Poly::reduce_order</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/poly.H" line="16" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_poly_1aec529e2b59d8b37f9737ecea5bf35bc2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Poly::deriv</definition>
-        <argsstring>(double z)</argsstring>
-        <name>deriv</name>
-        <qualifiedname>Poly::deriv</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/poly.H" line="60" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_poly_1a74886f241e211f5af127c087efc99d7f" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Poly::eval</definition>
-        <argsstring>(double z)</argsstring>
-        <name>eval</name>
-        <qualifiedname>Poly::eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/poly.H" line="59" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_poly_1ac6d1975152b5060a30b666cbc5572218" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int Poly::getorder</definition>
-        <argsstring>(void) const</argsstring>
-        <name>getorder</name>
-        <qualifiedname>Poly::getorder</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/poly.H" line="36" column="7" bodyfile="/home/weinberg/Projects/EXP/include/poly.H" bodystart="36" bodyend="36"/>
-        <references refid="class_poly_1a20d36d5470f8ee069b547dbe2f98ba4d" compoundref="poly_8_h" startline="15">order</references>
-      </memberdef>
-      <memberdef kind="function" id="class_poly_1a258f68882745060dc9be6ba7381fc8ac" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type><ref refid="class_poly" kindref="compound">Poly</ref> &amp;</type>
-        <definition>Poly &amp; Poly::operator%=</definition>
-        <argsstring>(Poly &amp;)</argsstring>
-        <name>operator%=</name>
-        <qualifiedname>Poly::operator%=</qualifiedname>
-        <param>
-          <type><ref refid="class_poly" kindref="compound">Poly</ref> &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/poly.H" line="54" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_poly_1a41e2354b071745f8d51038e6bd7a7839" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type><ref refid="class_poly" kindref="compound">Poly</ref> &amp;</type>
-        <definition>Poly &amp; Poly::operator&amp;=</definition>
-        <argsstring>(Poly &amp;)</argsstring>
-        <name>operator&amp;=</name>
-        <qualifiedname>Poly::operator&amp;=</qualifiedname>
-        <param>
-          <type><ref refid="class_poly" kindref="compound">Poly</ref> &amp;</type>
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diff --git a/doxyxml/class_pot_accel.xml b/doxyxml/class_pot_accel.xml
deleted file mode 100644
index 4dba68c..0000000
--- a/doxyxml/class_pot_accel.xml
+++ /dev/null
@@ -1,1588 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <compoundname>PotAccel</compoundname>
-    <derivedcompoundref refid="class_basis" prot="public" virt="non-virtual">Basis</derivedcompoundref>
-    <derivedcompoundref refid="class_cube" prot="public" virt="non-virtual">Cube</derivedcompoundref>
-    <derivedcompoundref refid="class_direct" prot="public" virt="non-virtual">Direct</derivedcompoundref>
-    <derivedcompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</derivedcompoundref>
-    <derivedcompoundref refid="class_no_force" prot="public" virt="non-virtual">NoForce</derivedcompoundref>
-    <derivedcompoundref refid="class_shells" prot="public" virt="non-virtual">Shells</derivedcompoundref>
-    <derivedcompoundref refid="class_slab_s_l" prot="public" virt="non-virtual">SlabSL</derivedcompoundref>
-    <derivedcompoundref refid="class_two_center" prot="public" virt="non-virtual">TwoCenter</derivedcompoundref>
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-        <type>pthread_t *</type>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type><ref refid="structthrd__pass___pot_accel" kindref="compound">thrd_pass_PotAccel</ref> *</type>
-        <definition>thrd_pass_PotAccel* PotAccel::td</definition>
-        <argsstring></argsstring>
-        <name>td</name>
-        <qualifiedname>PotAccel::td</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="40" column="22" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="40" bodyend="-1"/>
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-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* PotAccel::cC</definition>
-        <argsstring></argsstring>
-        <name>cC</name>
-        <qualifiedname>PotAccel::cC</qualifiedname>
-        <briefdescription>
-<para>Current component pointer. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <referencedby refid="class_polar_basis_1a6e26e359a05e6860626196e156475b6b" compoundref="_polar_basis_8_h" startline="513" endline="514">PolarBasis::determine_coefficients</referencedby>
-        <referencedby refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724" compoundref="_pot_accel_8_h" startline="136" endline="137">determine_coefficients</referencedby>
-        <referencedby refid="class_spherical_basis_1a8ff7907cd7af5f79b63f11282c277cb2" compoundref="_spherical_basis_8_h" startline="362" endline="363">SphericalBasis::determine_coefficients</referencedby>
-        <referencedby refid="class_cube_1_1exe_timer_1a6a72d798de758a187cdc1efe342cf444" compoundref="_cube_8_h" startline="124" endline="145">Cube::exeTimer::~exeTimer</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool PotAccel::coef_dump</definition>
-        <argsstring></argsstring>
-        <name>coef_dump</name>
-        <qualifiedname>PotAccel::coef_dump</qualifiedname>
-        <briefdescription>
-<para>Coefficient dump flag (true if a useful dump_coefs member is defined) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="71" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="71" bodyend="-1"/>
-        <referencedby refid="class_pot_accel_1a4a812594dff363f07bf57d69a60e4a13" compoundref="_pot_accel_8_h" startline="178" endline="178">HaveCoefDump</referencedby>
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-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* PotAccel::component</definition>
-        <argsstring></argsstring>
-        <name>component</name>
-        <qualifiedname>PotAccel::component</qualifiedname>
-        <briefdescription>
-<para>&quot;Back&quot; pointer to component that instantiated this force </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="56" column="13" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="56" bodyend="-1"/>
-        <referencedby refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" compoundref="_cylinder_8_h" startline="417" endline="430">Cylinder::multistep_update_begin</referencedby>
-        <referencedby refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb" compoundref="_pot_accel_8_h" startline="154" endline="154">RegisterComponent</referencedby>
-        <referencedby refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" compoundref="_two_center_8_h" startline="126" endline="130">TwoCenter::RegisterComponent</referencedby>
-        <referencedby refid="class_cube_1_1exe_timer_1a6a72d798de758a187cdc1efe342cf444" compoundref="_cube_8_h" startline="124" endline="145">Cube::exeTimer::~exeTimer</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" static="no" mutable="no">
-        <type>const YAML::Node &amp;</type>
-        <definition>const YAML::Node&amp; PotAccel::conf</definition>
-        <argsstring></argsstring>
-        <name>conf</name>
-        <qualifiedname>PotAccel::conf</qualifiedname>
-        <briefdescription>
-<para>Contains parameter database. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="46" column="20" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="46" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool PotAccel::cuda_aware</definition>
-        <argsstring></argsstring>
-        <name>cuda_aware</name>
-        <qualifiedname>PotAccel::cuda_aware</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Cuda implementation is available for this source method. Otherwise, particle structures will be copied between the GPU and CPU at significant expanse </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="91" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="91" bodyend="-1"/>
-        <referencedby refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" compoundref="_pot_accel_8_h" startline="233" endline="233">cudaAware</referencedby>
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-      <memberdef kind="variable" id="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" static="no" mutable="no">
-        <type>std::set&lt; std::string &gt;</type>
-        <definition>std::set&lt;std::string&gt; PotAccel::current_keys</definition>
-        <argsstring></argsstring>
-        <name>current_keys</name>
-        <qualifiedname>PotAccel::current_keys</qualifiedname>
-        <briefdescription>
-<para>Current YAML keys to check configuration. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="94" column="12" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="94" bodyend="-1"/>
-        <referencedby refid="class_pot_accel_1a0355cfe43cdde5237f7be234e94de64b" compoundref="_pot_accel_8_h" startline="236" endline="236">unmatched</referencedby>
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-      <memberdef kind="variable" id="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" prot="protected" static="no" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned PotAccel::mlevel</definition>
-        <argsstring></argsstring>
-        <name>mlevel</name>
-        <qualifiedname>PotAccel::mlevel</qualifiedname>
-        <briefdescription>
-<para>Current level for multistepping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="80" column="12" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="80" bodyend="-1"/>
-        <referencedby refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" compoundref="_pot_accel_8_h" startline="204" endline="204">set_multistep_level</referencedby>
-        <referencedby refid="class_two_center_1afc027c542932d0fb5c23365730c7a225" compoundref="_two_center_8_h" startline="134" endline="139">TwoCenter::set_multistep_level</referencedby>
-        <referencedby refid="class_cube_1_1exe_timer_1a6a72d798de758a187cdc1efe342cf444" compoundref="_cube_8_h" startline="124" endline="145">Cube::exeTimer::~exeTimer</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pot_accel_1a73976f361ed7abf13001835bfcdee639" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int PotAccel::nbodies</definition>
-        <argsstring></argsstring>
-        <name>nbodies</name>
-        <qualifiedname>PotAccel::nbodies</qualifiedname>
-        <briefdescription>
-<para>Number of bodies. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Call to return <computeroutput>value</computeroutput> for requested parameter <computeroutput>name</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="53" column="7" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="53" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool PotAccel::play_back</definition>
-        <argsstring></argsstring>
-        <name>play_back</name>
-        <qualifiedname>PotAccel::play_back</qualifiedname>
-        <briefdescription>
-<para>Coefficient play back flag (true cached coefficients in use) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="74" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="74" bodyend="-1"/>
-        <referencedby refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" compoundref="_cyl_two_d_8_h" startline="159" endline="167">Cylinder::compute_multistep_coefficients</referencedby>
-        <referencedby refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" compoundref="_cylinder_8_h" startline="417" endline="430">Cylinder::multistep_update_begin</referencedby>
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-        <referencedby refid="class_pot_accel_1a4f2099b1b705731b909e63c90ea59f04" compoundref="_pot_accel_8_h" startline="219" endline="219">NoCoefs</referencedby>
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-        <type>bool</type>
-        <definition>bool PotAccel::play_cnew</definition>
-        <argsstring></argsstring>
-        <name>play_cnew</name>
-        <qualifiedname>PotAccel::play_cnew</qualifiedname>
-        <briefdescription>
-<para>Compute new coefficients during play back (false by default) </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="77" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="77" bodyend="-1"/>
-        <referencedby refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" compoundref="_cyl_two_d_8_h" startline="159" endline="167">Cylinder::compute_multistep_coefficients</referencedby>
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-        <type>double</type>
-        <definition>double PotAccel::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>PotAccel::scale</qualifiedname>
-        <briefdescription>
-<para>Length scaling (not used for all methods) </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="86" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="86" bodyend="-1"/>
-        <referencedby refid="class_pot_accel_1a0998c361bca277b3bba95f59acaba203" compoundref="_pot_accel_8_h" startline="216" endline="216">getScale</referencedby>
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-        <type><ref refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" kindref="member">TList</ref></type>
-        <definition>TList PotAccel::timer_list</definition>
-        <argsstring></argsstring>
-        <name>timer_list</name>
-        <qualifiedname>PotAccel::timer_list</qualifiedname>
-        <briefdescription>
-<para>For thread timing. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="83" column="9" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="83" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int PotAccel::use_external</definition>
-        <argsstring></argsstring>
-        <name>use_external</name>
-        <qualifiedname>PotAccel::use_external</qualifiedname>
-        <briefdescription>
-<para>Set flag to add to external potential field. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="68" column="7" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="68" bodyend="-1"/>
-        <referencedby refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" compoundref="_pot_accel_8_h" startline="175" endline="175">ClearExternal</referencedby>
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-        <type>int</type>
-        <definition>int PotAccel::used</definition>
-        <argsstring></argsstring>
-        <name>used</name>
-        <qualifiedname>PotAccel::used</qualifiedname>
-        <briefdescription>
-<para>Number of particles used on last coefficient evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="65" column="7" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="65" bodyend="-1"/>
-        <referencedby refid="class_axisymmetric_basis_1a93d8a3c0e104139477fec734a6baf8e6" compoundref="_axisymmetric_basis_8_h" startline="188" endline="188">AxisymmetricBasis::multistep_reset</referencedby>
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-        <type>bool</type>
-        <definition>bool PotAccel::compute</definition>
-        <argsstring></argsstring>
-        <name>compute</name>
-        <qualifiedname>PotAccel::compute</qualifiedname>
-        <briefdescription>
-<para>Flag to indicate that PCA variance matrix should be recomputed. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="151" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="151" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_pot_accel_1a6a9ec23d29b553c1625bd8e88fe7692d" prot="public" static="no" mutable="no">
-        <type>int</type>
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-        <argsstring></argsstring>
-        <name>dof</name>
-        <qualifiedname>PotAccel::dof</qualifiedname>
-        <briefdescription>
-<para>Dimension of the force vector (degrees of freedom) </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="118" column="7" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="118" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_pot_accel_1adb6ef0bdae7d3520ca1f9fd8a6d648ea" prot="public" static="no" mutable="no">
-        <type><ref refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fd" kindref="member">Geometry</ref></type>
-        <definition>Geometry PotAccel::geometry</definition>
-        <argsstring></argsstring>
-        <name>geometry</name>
-        <qualifiedname>PotAccel::geometry</qualifiedname>
-        <briefdescription>
-<para>sphere, cylinder, cube, slab, other </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="115" column="12" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="115" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_pot_accel_1a1cdb2381070d7772caf533433455284c" prot="public" static="no" mutable="no">
-        <type>string</type>
-        <definition>string PotAccel::id</definition>
-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>PotAccel::id</qualifiedname>
-        <briefdescription>
-<para>Id string. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="106" column="10" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="106" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_pot_accel_1acd32c6464b705469911df718114187b9" prot="public" static="no" mutable="no">
-        <type>std::vector&lt; int &gt;</type>
-        <definition>std::vector&lt;int&gt; PotAccel::use</definition>
-        <argsstring></argsstring>
-        <name>use</name>
-        <qualifiedname>PotAccel::use</qualifiedname>
-        <briefdescription>
-<para>Thread particle counter. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="157" column="15" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="157" bodyend="-1"/>
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-        <type>pthread_mutex_t</type>
-        <definition>pthread_mutex_t PotAccel::cc_lock</definition>
-        <argsstring></argsstring>
-        <name>cc_lock</name>
-        <qualifiedname>PotAccel::cc_lock</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-<para>Mutex used to be used in the threading implementations to lock PCA variance matrix for updating </para>
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-<para>Cuda aware. </para>
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-<para>Dump current coefficients. </para>
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-        <argsstring>(const std::string &amp;file)</argsstring>
-        <name>dump_coefs_h5</name>
-        <qualifiedname>PotAccel::dump_coefs_h5</qualifiedname>
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-        <reimplementedby refid="class_slab_s_l_1aa35f069d1743fa627eea28b53e78f514">dump_coefs_h5</reimplementedby>
-        <reimplementedby refid="class_spherical_basis_1aababccfd0ab296c683963963caead0be">dump_coefs_h5</reimplementedby>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="182" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="182" bodyend="182"/>
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-      <memberdef kind="function" id="class_pot_accel_1abee9651463af53460b622250d311329e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PotAccel::exp_thread_fork</definition>
-        <argsstring>(bool coef)</argsstring>
-        <name>exp_thread_fork</name>
-        <qualifiedname>PotAccel::exp_thread_fork</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>coef</declname>
-        </param>
-        <briefdescription>
-<para>Make some threads. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="160" column="8"/>
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-      <memberdef kind="function" id="class_pot_accel_1ab78f20762031db204f636fc8e74ea986" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void PotAccel::get_acceleration_and_potential</definition>
-        <argsstring>(Component *c)=0</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>PotAccel::get_acceleration_and_potential</qualifiedname>
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-        <reimplementedby refid="class_direct_1a18383ced262f3ce760b51b9e8f08838d">get_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_no_force_1adeb25b620863fd865c249c4f3f4f87ee">get_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_shells_1ac28ac4176d1d367723599c113d19f8f2">get_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_slab_s_l_1a0424b21e20c21a17fd2180fc0b5eeba1">get_acceleration_and_potential</reimplementedby>
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-        <reimplementedby refid="class_scatter_m_f_p_1acdb78f570e82b0efa8740df0a98912b7">get_acceleration_and_potential</reimplementedby>
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-        <reimplementedby refid="class_spherical_basis_1a05f775f3bae56543829492fae9a0b75f">get_acceleration_and_potential</reimplementedby>
-        <reimplementedby refid="class_external_force_1a0d4186a622ace64c9881fd231cf165c6">get_acceleration_and_potential</reimplementedby>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>The main force evaluation routine to be called by clients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="130" column="16"/>
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-        <type>double</type>
-        <definition>virtual double PotAccel::getScale</definition>
-        <argsstring>()</argsstring>
-        <name>getScale</name>
-        <qualifiedname>PotAccel::getScale</qualifiedname>
-        <briefdescription>
-<para>Get current length scale. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="216" column="18" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="216" bodyend="216"/>
-        <references refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" compoundref="_pot_accel_8_h" startline="86">scale</references>
-      </memberdef>
-      <memberdef kind="function" id="class_pot_accel_1a4a812594dff363f07bf57d69a60e4a13" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool PotAccel::HaveCoefDump</definition>
-        <argsstring>()</argsstring>
-        <name>HaveCoefDump</name>
-        <qualifiedname>PotAccel::HaveCoefDump</qualifiedname>
-        <briefdescription>
-<para>Dump coefficients for this force? </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="178" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="178" bodyend="178"/>
-        <references refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" compoundref="_pot_accel_8_h" startline="71">coef_dump</references>
-      </memberdef>
-      <memberdef kind="function" id="class_pot_accel_1a706b04f03c8beb4369dd125406770116" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void PotAccel::kill_mutex</definition>
-        <argsstring>(pthread_mutex_t *m, const char *caller, const char *name)</argsstring>
-        <name>kill_mutex</name>
-        <qualifiedname>PotAccel::kill_mutex</qualifiedname>
-        <param>
-          <type>pthread_mutex_t *</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const char *</type>
-          <declname>caller</declname>
-        </param>
-        <param>
-          <type>const char *</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Kill a mutex. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="166" column="8"/>
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-        <type>void</type>
-        <definition>void PotAccel::make_mutex</definition>
-        <argsstring>(pthread_mutex_t *m, const char *caller, const char *name)</argsstring>
-        <name>make_mutex</name>
-        <qualifiedname>PotAccel::make_mutex</qualifiedname>
-        <param>
-          <type>pthread_mutex_t *</type>
-          <declname>m</declname>
-        </param>
-        <param>
-          <type>const char *</type>
-          <declname>caller</declname>
-        </param>
-        <param>
-          <type>const char *</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Make a mutex. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="163" column="8"/>
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-        <type>void</type>
-        <definition>virtual void PotAccel::multistep_debug</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_debug</name>
-        <qualifiedname>PotAccel::multistep_debug</qualifiedname>
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-        <briefdescription>
-<para>Print debug info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="210" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="210" bodyend="210"/>
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-        <type>void</type>
-        <definition>virtual void PotAccel::multistep_reset</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_reset</name>
-        <qualifiedname>PotAccel::multistep_reset</qualifiedname>
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-        <briefdescription>
-<para>Reset data for multistep. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="207" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="207" bodyend="207"/>
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-        <type>void</type>
-        <definition>virtual void PotAccel::multistep_update</definition>
-        <argsstring>(int cur, int next, Component *c, int i, int id)</argsstring>
-        <name>multistep_update</name>
-        <qualifiedname>PotAccel::multistep_update</qualifiedname>
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-        <reimplementedby refid="class_two_center_1a9840bdb9f5c27ce8f2d7d57013dd0b0a">multistep_update</reimplementedby>
-        <param>
-          <type>int</type>
-          <declname>cur</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>next</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-<para>Implementation of level shifts. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="193" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="193" bodyend="193"/>
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-        <type>void</type>
-        <definition>virtual void PotAccel::multistep_update_begin</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_begin</name>
-        <qualifiedname>PotAccel::multistep_update_begin</qualifiedname>
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-        <briefdescription>
-<para>Execute to begin level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step force algorithm when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>virtual void PotAccel::multistep_update_finish</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_finish</name>
-        <qualifiedname>PotAccel::multistep_update_finish</qualifiedname>
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-        <briefdescription>
-<para>Execute to finish level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="196" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="196" bodyend="196"/>
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-        <type>bool</type>
-        <definition>bool PotAccel::NoCoefs</definition>
-        <argsstring>()</argsstring>
-        <name>NoCoefs</name>
-        <qualifiedname>PotAccel::NoCoefs</qualifiedname>
-        <briefdescription>
-<para>Check whether coeffcients are not available. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="219" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="219" bodyend="219"/>
-        <references refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" compoundref="_pot_accel_8_h" startline="74">play_back</references>
-        <references refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" compoundref="_pot_accel_8_h" startline="77">play_cnew</references>
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-        <type></type>
-        <definition>PotAccel::PotAccel</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf)</argsstring>
-        <name>PotAccel</name>
-        <qualifiedname>PotAccel::PotAccel</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
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-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (a <ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>line</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is parsed and info is made available to derived classes on request </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="124" column="3"/>
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-        <type>void</type>
-        <definition>void PotAccel::print_timings</definition>
-        <argsstring>(const string &amp;, TList &amp;tlist)</argsstring>
-        <name>print_timings</name>
-        <qualifiedname>PotAccel::print_timings</qualifiedname>
-        <param>
-          <type>const string &amp;</type>
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-        <param>
-          <type><ref refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" kindref="member">TList</ref> &amp;</type>
-          <declname>tlist</declname>
-        </param>
-        <briefdescription>
-<para>For timing the fraction spent in threaded force methods. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="223" column="8"/>
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-        <type>void</type>
-        <definition>void PotAccel::print_timings</definition>
-        <argsstring>(const string &amp;label)</argsstring>
-        <name>print_timings</name>
-        <qualifiedname>PotAccel::print_timings</qualifiedname>
-        <param>
-          <type>const string &amp;</type>
-          <declname>label</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>virtual void PotAccel::RegisterComponent</definition>
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-        <name>RegisterComponent</name>
-        <qualifiedname>PotAccel::RegisterComponent</qualifiedname>
-        <reimplementedby refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7">RegisterComponent</reimplementedby>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>For access to parent component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="154" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="154" bodyend="154"/>
-        <references refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" compoundref="_pot_accel_8_h" startline="56">component</references>
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-        <type>void</type>
-        <definition>virtual void PotAccel::set_multistep_level</definition>
-        <argsstring>(unsigned n)</argsstring>
-        <name>set_multistep_level</name>
-        <qualifiedname>PotAccel::set_multistep_level</qualifiedname>
-        <reimplementedby refid="class_two_center_1afc027c542932d0fb5c23365730c7a225">set_multistep_level</reimplementedby>
-        <param>
-          <type>unsigned</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Set the level for evaluating acceleration at level n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="204" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="204" bodyend="204"/>
-        <references refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" compoundref="_pot_accel_8_h" startline="80">mlevel</references>
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-        <type>void</type>
-        <definition>void PotAccel::SetExternal</definition>
-        <argsstring>()</argsstring>
-        <name>SetExternal</name>
-        <qualifiedname>PotAccel::SetExternal</qualifiedname>
-        <briefdescription>
-<para>Set external flag for current force call. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="172" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="172" bodyend="172"/>
-        <references refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" compoundref="_pot_accel_8_h" startline="68">use_external</references>
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-      <memberdef kind="function" id="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void PotAccel::setScale</definition>
-        <argsstring>(double s)</argsstring>
-        <name>setScale</name>
-        <qualifiedname>PotAccel::setScale</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>s</declname>
-        </param>
-        <briefdescription>
-<para>Set new length scale (default: 1.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="213" column="16" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="213" bodyend="213"/>
-        <references refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" compoundref="_pot_accel_8_h" startline="86">scale</references>
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-        <type>void</type>
-        <definition>void PotAccel::thread_timing_beg</definition>
-        <argsstring>(int id)</argsstring>
-        <name>thread_timing_beg</name>
-        <qualifiedname>PotAccel::thread_timing_beg</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="225" column="8"/>
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-        <type>void</type>
-        <definition>void PotAccel::thread_timing_end</definition>
-        <argsstring>(int id)</argsstring>
-        <name>thread_timing_end</name>
-        <qualifiedname>PotAccel::thread_timing_end</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="226" column="8"/>
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-        <type>std::set&lt; std::string &gt;</type>
-        <definition>std::set&lt; std::string &gt; PotAccel::unmatched</definition>
-        <argsstring>()</argsstring>
-        <name>unmatched</name>
-        <qualifiedname>PotAccel::unmatched</qualifiedname>
-        <briefdescription>
-<para>Get unaccounted keys. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="236" column="12" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="236" bodyend="236"/>
-        <references refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" compoundref="_pot_accel_8_h" startline="94">current_keys</references>
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-        <type>int</type>
-        <definition>int PotAccel::Used</definition>
-        <argsstring>()</argsstring>
-        <name>Used</name>
-        <qualifiedname>PotAccel::Used</qualifiedname>
-        <briefdescription>
-<para>Return umber of particles used on last coefficient evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="169" column="7" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="169" bodyend="169"/>
-        <references refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" compoundref="_pot_accel_8_h" startline="65">used</references>
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-        <type></type>
-        <definition>virtual PotAccel::~PotAccel</definition>
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-        <name>~PotAccel</name>
-        <qualifiedname>PotAccel::~PotAccel</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-    </sectiondef>
-    <briefdescription>
-<para>Defines the basic components of the Force class. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>This class provides the threading members. Derived classes must provide the per thread members for evaluating coeffients (if any) and acceleration. </para>
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-    <inheritancegraph>
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-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Basis</label>
-        <link refid="class_basis"/>
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-        </childnode>
-      </node>
-      <node id="8">
-        <label>Bessel</label>
-        <link refid="class_bessel"/>
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-        </childnode>
-      </node>
-      <node id="5">
-        <label>CBDisk</label>
-        <link refid="class_c_b_disk"/>
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-        </childnode>
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-      <node id="11">
-        <label>Cube</label>
-        <link refid="class_cube"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>Cylinder</label>
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-        </childnode>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
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-        <label>Direct</label>
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-      <node id="32">
-        <label>EJcom</label>
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-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
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-        </childnode>
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-      <node id="6">
-        <label>FlatDisk</label>
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-      <node id="4">
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-      <node id="1">
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-      <node id="30">
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-      <node id="17">
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-      <node id="20">
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-      <node id="21">
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-      <member refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986" prot="public" virt="pure-virtual"><scope>PotAccel</scope><name>get_acceleration_and_potential</name></member>
-      <member refid="class_pot_accel_1a0998c361bca277b3bba95f59acaba203" prot="public" virt="virtual"><scope>PotAccel</scope><name>getScale</name></member>
-      <member refid="class_pot_accel_1a4a812594dff363f07bf57d69a60e4a13" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>HaveCoefDump</name></member>
-      <member refid="class_pot_accel_1a1cdb2381070d7772caf533433455284c" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>id</name></member>
-      <member refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d" prot="protected" virt="pure-virtual"><scope>PotAccel</scope><name>initialize</name></member>
-      <member refid="class_pot_accel_1a706b04f03c8beb4369dd125406770116" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>kill_mutex</name></member>
-      <member refid="class_pot_accel_1a65fa890eea987e18d552825ab074939b" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>make_mutex</name></member>
-      <member refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" prot="protected" virt="non-virtual"><scope>PotAccel</scope><name>mlevel</name></member>
-      <member refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121" prot="public" virt="virtual"><scope>PotAccel</scope><name>multistep_debug</name></member>
-      <member refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f" prot="public" virt="virtual"><scope>PotAccel</scope><name>multistep_reset</name></member>
-      <member refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a" prot="public" virt="virtual"><scope>PotAccel</scope><name>multistep_update</name></member>
-      <member refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381" prot="public" virt="virtual"><scope>PotAccel</scope><name>multistep_update_begin</name></member>
-      <member refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e" prot="public" virt="virtual"><scope>PotAccel</scope><name>multistep_update_finish</name></member>
-      <member refid="class_pot_accel_1a73976f361ed7abf13001835bfcdee639" prot="protected" virt="non-virtual"><scope>PotAccel</scope><name>nbodies</name></member>
-      <member refid="class_pot_accel_1a4f2099b1b705731b909e63c90ea59f04" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>NoCoefs</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda7c49f38007dad33fb1e48fdebdd2f8c1" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>other</name></member>
-      <member refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" prot="protected" virt="non-virtual"><scope>PotAccel</scope><name>play_back</name></member>
-      <member refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" prot="protected" virt="non-virtual"><scope>PotAccel</scope><name>play_cnew</name></member>
-      <member refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>PotAccel</name></member>
-      <member refid="class_pot_accel_1a5e257d38dbf5c3d9630906a96abf6915" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a37a3c348c0febbf70ff94949071c3beb" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb" prot="public" virt="virtual"><scope>PotAccel</scope><name>RegisterComponent</name></member>
-      <member refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" prot="protected" virt="non-virtual"><scope>PotAccel</scope><name>scale</name></member>
-      <member refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" prot="public" virt="virtual"><scope>PotAccel</scope><name>set_multistep_level</name></member>
-      <member refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>SetExternal</name></member>
-      <member refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" prot="public" virt="virtual"><scope>PotAccel</scope><name>setScale</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda0a1acd8c0d6e745fb0ae3e33e458a9b8" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>slab</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda996ce4577548b6da6b1330a78b1c6f6a" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>sphere</name></member>
-      <member refid="class_pot_accel_1aff158a74d7328a080ed619c1456836f5" prot="private" virt="non-virtual"><scope>PotAccel</scope><name>t</name></member>
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-      <member refid="class_pot_accel_1a125d7343a34d292a3e4a48a5d984cac4" prot="private" virt="non-virtual"><scope>PotAccel</scope><name>td</name></member>
-      <member refid="class_pot_accel_1a86d0d012a44e2eb7c3e385d852a5fdde" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>thread_timing_beg</name></member>
-      <member refid="class_pot_accel_1a76c805cd8d0d134d37929eeb48115b33" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>thread_timing_end</name></member>
-      <member refid="class_pot_accel_1a4315e73a641c54eefc548b7d14cb06b6" prot="protected" virt="non-virtual"><scope>PotAccel</scope><name>timer_list</name></member>
-      <member refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>TList</name></member>
-      <member refid="class_pot_accel_1a0355cfe43cdde5237f7be234e94de64b" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>unmatched</name></member>
-      <member refid="class_pot_accel_1acd32c6464b705469911df718114187b9" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>use</name></member>
-      <member refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" prot="protected" virt="non-virtual"><scope>PotAccel</scope><name>use_external</name></member>
-      <member refid="class_pot_accel_1ae2e0dbf849707704a3d42a1fa91ce060" prot="public" virt="non-virtual"><scope>PotAccel</scope><name>Used</name></member>
-      <member refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" prot="protected" virt="non-virtual"><scope>PotAccel</scope><name>used</name></member>
-      <member refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" prot="public" virt="virtual"><scope>PotAccel</scope><name>~PotAccel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_pot_r_z.xml b/doxyxml/class_pot_r_z.xml
deleted file mode 100644
index aa29f98..0000000
--- a/doxyxml/class_pot_r_z.xml
+++ /dev/null
@@ -1,327 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_pot_r_z" kind="class" language="C++" prot="public">
-    <compoundname>PotRZ</compoundname>
-    <includes refid="_pot_r_z_8_h" local="no">PotRZ.H</includes>
-    <innerclass refid="class_pot_r_z_1_1_sk" prot="protected">PotRZ::Sk</innerclass>
-    <sectiondef kind="public-type">
-      <memberdef kind="enum" id="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49" prot="public" static="no" strong="yes">
-        <type></type>
-        <name>Field</name>
-        <qualifiedname>PotRZ::Field</qualifiedname>
-        <enumvalue id="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" prot="public">
-          <name>potential</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a0412371a6f379b32238a840927f69a59" prot="public">
-          <name>rforce</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a7d99b11816e890714319466b5641071e" prot="public">
-          <name>zforce</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-<para>Which field. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="69" column="3" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="69" bodyend="69"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_pot_r_z_1ac9418a8a416f340d0e6374ebd21dfde4" prot="protected" static="no" mutable="no">
-        <type>std::function&lt; double(double)&gt;</type>
-        <definition>std::function&lt;double(double)&gt; PotRZ::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>PotRZ::mass</qualifiedname>
-        <briefdescription>
-<para>Sigma(R) functor instance stored by the constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="15" column="17" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="15" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int PotRZ::M</definition>
-        <argsstring></argsstring>
-        <name>M</name>
-        <qualifiedname>PotRZ::M</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="53" column="8" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="53" bodyend="-1"/>
-        <referencedby refid="class_pot_r_z_1aa605b2c0e95c83b100b9a151cf665ae6" compoundref="_pot_r_z_8_h" startline="115" endline="152">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" compoundref="_pot_r_z_8_h" startline="73" endline="111">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" compoundref="_pot_r_z_8_h" startline="60" endline="66">PotRZ</referencedby>
-        <referencedby refid="class_pot_r_z_1_1_sk_1a1a01e40c1096829cbd337c6d89a14267" compoundref="_pot_r_z_8_h" startline="32" endline="35">PotRZ::Sk::Sk</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" prot="private" static="no" mutable="no">
-        <type><ref refid="class_pot_r_z_1_1_sk" kindref="compound">Sk</ref></type>
-        <definition>Sk PotRZ::u</definition>
-        <argsstring></argsstring>
-        <name>u</name>
-        <qualifiedname>PotRZ::u</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="52" column="8" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="52" bodyend="-1"/>
-        <referencedby refid="class_pot_r_z_1a946c0104998195fd35f0a87a19171b59" compoundref="_pot_r_z_8_h" startline="156" endline="159">getKT</referencedby>
-        <referencedby refid="class_pot_r_z_1aa605b2c0e95c83b100b9a151cf665ae6" compoundref="_pot_r_z_8_h" startline="115" endline="152">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" compoundref="_pot_r_z_8_h" startline="73" endline="111">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" compoundref="_pot_r_z_8_h" startline="60" endline="66">PotRZ</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" prot="private" static="no" mutable="no">
-        <type><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref></type>
-        <definition>QDHT PotRZ::v</definition>
-        <argsstring></argsstring>
-        <name>v</name>
-        <qualifiedname>PotRZ::v</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="51" column="8" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="51" bodyend="-1"/>
-        <referencedby refid="class_pot_r_z_1aa605b2c0e95c83b100b9a151cf665ae6" compoundref="_pot_r_z_8_h" startline="115" endline="152">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" compoundref="_pot_r_z_8_h" startline="73" endline="111">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" compoundref="_pot_r_z_8_h" startline="60" endline="66">PotRZ</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" prot="private" static="no" mutable="no">
-        <type><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref></type>
-        <definition>QDHT PotRZ::vm</definition>
-        <argsstring></argsstring>
-        <name>vm</name>
-        <qualifiedname>PotRZ::vm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="51" column="10" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="51" bodyend="-1"/>
-        <referencedby refid="class_pot_r_z_1aa605b2c0e95c83b100b9a151cf665ae6" compoundref="_pot_r_z_8_h" startline="115" endline="152">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" compoundref="_pot_r_z_8_h" startline="73" endline="111">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" compoundref="_pot_r_z_8_h" startline="60" endline="66">PotRZ</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" prot="private" static="no" mutable="no">
-        <type><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref></type>
-        <definition>QDHT PotRZ::vp</definition>
-        <argsstring></argsstring>
-        <name>vp</name>
-        <qualifiedname>PotRZ::vp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="51" column="13" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="51" bodyend="-1"/>
-        <referencedby refid="class_pot_r_z_1aa605b2c0e95c83b100b9a151cf665ae6" compoundref="_pot_r_z_8_h" startline="115" endline="152">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" compoundref="_pot_r_z_8_h" startline="73" endline="111">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" compoundref="_pot_r_z_8_h" startline="60" endline="66">PotRZ</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_pot_r_z_1a946c0104998195fd35f0a87a19171b59" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::tuple&lt; Eigen::VectorXd, Eigen::VectorXd &gt;</type>
-        <definition>std::tuple&lt; Eigen::VectorXd, Eigen::VectorXd &gt; PotRZ::getKT</definition>
-        <argsstring>(std::function&lt; double(double)&gt; func)</argsstring>
-        <name>getKT</name>
-        <qualifiedname>PotRZ::getKT</qualifiedname>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-          <declname>func</declname>
-        </param>
-        <briefdescription>
-<para>Evalute the forward transform: <ref refid="class_pot_r_z_1_1_sk" kindref="compound">Sk</ref>. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="156" column="3" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="156" bodyend="159"/>
-        <references refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" compoundref="_pot_r_z_8_h" startline="52">u</references>
-      </memberdef>
-      <memberdef kind="function" id="class_pot_r_z_1aa605b2c0e95c83b100b9a151cf665ae6" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double PotRZ::operator()</definition>
-        <argsstring>(double r, double z, std::function&lt; double(double)&gt; dens, Field f=Field::potential)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>PotRZ::operator()</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-          <declname>dens</declname>
-        </param>
-        <param>
-          <type><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49" kindref="member">Field</ref></type>
-          <declname>f</declname>
-          <defval><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">Field::potential</ref></defval>
-        </param>
-        <briefdescription>
-<para>Perform the evaluation at a particular r. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="114" column="10" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="115" bodyend="152"/>
-        <references refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" compoundref="_pot_r_z_8_h" startline="53">M</references>
-        <references refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86">potential</references>
-        <references refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a0412371a6f379b32238a840927f69a59">rforce</references>
-        <references refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" compoundref="_pot_r_z_8_h" startline="52">u</references>
-        <references refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" compoundref="_pot_r_z_8_h" startline="51">v</references>
-        <references refid="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" compoundref="_pot_r_z_8_h" startline="51">vm</references>
-        <references refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" compoundref="_pot_r_z_8_h" startline="51">vp</references>
-        <references refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a7d99b11816e890714319466b5641071e">zforce</references>
-      </memberdef>
-      <memberdef kind="function" id="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::tuple&lt; Eigen::VectorXd, Eigen::VectorXd &gt;</type>
-        <definition>std::tuple&lt; Eigen::VectorXd, Eigen::VectorXd &gt; PotRZ::operator()</definition>
-        <argsstring>(double z, std::function&lt; double(double)&gt; dens, Field f=Field::potential)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>PotRZ::operator()</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-          <declname>dens</declname>
-        </param>
-        <param>
-          <type><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49" kindref="member">Field</ref></type>
-          <declname>f</declname>
-          <defval><ref refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86" kindref="member">Field::potential</ref></defval>
-        </param>
-        <briefdescription>
-<para>Perform the evaluation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="72" column="14" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="73" bodyend="111"/>
-        <references refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" compoundref="_q_d_h_t_8_h" startline="75" endline="75">QDHT::getR</references>
-        <references refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" compoundref="_pot_r_z_8_h" startline="53">M</references>
-        <references refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49ad6614b55766ec7598b66c763af368a86">potential</references>
-        <references refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a0412371a6f379b32238a840927f69a59">rforce</references>
-        <references refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" compoundref="_pot_r_z_8_h" startline="52">u</references>
-        <references refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" compoundref="_pot_r_z_8_h" startline="51">v</references>
-        <references refid="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" compoundref="_pot_r_z_8_h" startline="51">vm</references>
-        <references refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" compoundref="_pot_r_z_8_h" startline="51">vp</references>
-        <references refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49a7d99b11816e890714319466b5641071e">zforce</references>
-      </memberdef>
-      <memberdef kind="function" id="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>PotRZ::PotRZ</definition>
-        <argsstring>(double R, int N, int M)</argsstring>
-        <name>PotRZ</name>
-        <qualifiedname>PotRZ::PotRZ</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>The gravitational potential by Hankel transform</para>
-<para>Constructor <linebreak/>
- </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="60" column="3" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="60" bodyend="66"/>
-        <references refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" compoundref="_pot_r_z_8_h" startline="53">M</references>
-        <references refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" compoundref="_pot_r_z_8_h" startline="52">u</references>
-        <references refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" compoundref="_pot_r_z_8_h" startline="51">v</references>
-        <references refid="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" compoundref="_pot_r_z_8_h" startline="51">vm</references>
-        <references refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" compoundref="_pot_r_z_8_h" startline="51">vp</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Compute the inverse Hankel transform using the quasi-discrete Hankel transform to get the potential based on Gauss&apos; Law applied to the cylindrical Laplacian. The user supplies a functor containing the surface density. E.g. B&amp;T equations 2.184-2.185. </para>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="1">
-        <label>PotRZ</label>
-        <link refid="class_pot_r_z"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>v</edgelabel>
-          <edgelabel>vm</edgelabel>
-          <edgelabel>vp</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>u</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotRZ::Sk</label>
-        <link refid="class_pot_r_z_1_1_sk"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>v</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>QDHT</label>
-        <link refid="class_q_d_h_t"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="11" column="1" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="12" bodyend="160"/>
-    <listofallmembers>
-      <member refid="class_pot_r_z_1a4df97f77d977fe37bea7072f3cb14b49" prot="public" virt="non-virtual"><scope>PotRZ</scope><name>Field</name></member>
-      <member refid="class_pot_r_z_1a946c0104998195fd35f0a87a19171b59" prot="public" virt="non-virtual"><scope>PotRZ</scope><name>getKT</name></member>
-      <member refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" prot="private" virt="non-virtual"><scope>PotRZ</scope><name>M</name></member>
-      <member refid="class_pot_r_z_1ac9418a8a416f340d0e6374ebd21dfde4" prot="protected" virt="non-virtual"><scope>PotRZ</scope><name>mass</name></member>
-      <member refid="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" prot="public" virt="non-virtual"><scope>PotRZ</scope><name>operator()</name></member>
-      <member refid="class_pot_r_z_1aa605b2c0e95c83b100b9a151cf665ae6" prot="public" virt="non-virtual"><scope>PotRZ</scope><name>operator()</name></member>
-      <member refid="class_pot_r_z_1a6b7d396bb83407d96f2581b71d6ac8d8" prot="public" virt="non-virtual"><scope>PotRZ</scope><name>PotRZ</name></member>
-      <member refid="class_pot_r_z_1a0173a3ff4d68cb063489211fe95c1d85" prot="private" virt="non-virtual"><scope>PotRZ</scope><name>u</name></member>
-      <member refid="class_pot_r_z_1aff5ef98880da3485610bf74720f00eee" prot="private" virt="non-virtual"><scope>PotRZ</scope><name>v</name></member>
-      <member refid="class_pot_r_z_1aadafff4888fc29771c1a19a960c7efdd" prot="private" virt="non-virtual"><scope>PotRZ</scope><name>vm</name></member>
-      <member refid="class_pot_r_z_1a0ca5eb32496b6da272e1991446fa005f" prot="private" virt="non-virtual"><scope>PotRZ</scope><name>vp</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_pot_r_z_1_1_sk.xml b/doxyxml/class_pot_r_z_1_1_sk.xml
deleted file mode 100644
index 00efc6d..0000000
--- a/doxyxml/class_pot_r_z_1_1_sk.xml
+++ /dev/null
@@ -1,137 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_pot_r_z_1_1_sk" kind="class" language="C++" prot="protected">
-    <compoundname>PotRZ::Sk</compoundname>
-    <includes refid="_pot_r_z_8_h" local="no">PotRZ.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int PotRZ::Sk::N</definition>
-        <argsstring></argsstring>
-        <name>N</name>
-        <qualifiedname>PotRZ::Sk::N</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="22" column="9" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_pot_r_z_1_1_sk_1afde061a179f038a2394ff2135f523d91" compoundref="_pot_r_z_8_h" startline="39" endline="45">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1_1_sk_1a1a01e40c1096829cbd337c6d89a14267" compoundref="_pot_r_z_8_h" startline="32" endline="35">Sk</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" prot="protected" static="no" mutable="no">
-        <type><ref refid="class_q_d_h_t" kindref="compound">QDHT</ref></type>
-        <definition>QDHT PotRZ::Sk::v</definition>
-        <argsstring></argsstring>
-        <name>v</name>
-        <qualifiedname>PotRZ::Sk::v</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="23" column="10" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="23" bodyend="-1"/>
-        <referencedby refid="class_pot_r_z_1_1_sk_1afde061a179f038a2394ff2135f523d91" compoundref="_pot_r_z_8_h" startline="39" endline="45">operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1_1_sk_1a1a01e40c1096829cbd337c6d89a14267" compoundref="_pot_r_z_8_h" startline="32" endline="35">Sk</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_pot_r_z_1_1_sk_1afde061a179f038a2394ff2135f523d91" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::tuple&lt; Eigen::VectorXd, Eigen::VectorXd &gt;</type>
-        <definition>std::tuple&lt; Eigen::VectorXd, Eigen::VectorXd &gt; PotRZ::Sk::operator()</definition>
-        <argsstring>(std::function&lt; double(double)&gt; dens)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>PotRZ::Sk::operator()</qualifiedname>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-          <declname>dens</declname>
-        </param>
-        <briefdescription>
-<para>Perform the transform. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="39" column="5" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="39" bodyend="45"/>
-        <references refid="class_q_d_h_t_1a544bb6c7f92c9b89b14e77893a384a3b" compoundref="_q_d_h_t_8_h" startline="78" endline="78">QDHT::getK</references>
-        <references refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" compoundref="_q_d_h_t_8_h" startline="75" endline="75">QDHT::getR</references>
-        <references refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" compoundref="_pot_r_z_8_h" startline="22">N</references>
-        <references refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" compoundref="_pot_r_z_8_h" startline="23">v</references>
-      </memberdef>
-      <memberdef kind="function" id="class_pot_r_z_1_1_sk_1a9b29e6af601361c3725faa652a6069e0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>PotRZ::Sk::Sk</definition>
-        <argsstring>()</argsstring>
-        <name>Sk</name>
-        <qualifiedname>PotRZ::Sk::Sk</qualifiedname>
-        <briefdescription>
-<para>Null constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="28" column="5" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="28" bodyend="28"/>
-      </memberdef>
-      <memberdef kind="function" id="class_pot_r_z_1_1_sk_1a1a01e40c1096829cbd337c6d89a14267" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>PotRZ::Sk::Sk</definition>
-        <argsstring>(double R, int N, int M)</argsstring>
-        <name>Sk</name>
-        <qualifiedname>PotRZ::Sk::Sk</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor with R=cutoff, N=number of knots, M=harmonic order, and a=parameter vector </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="32" column="5" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="32" bodyend="35"/>
-        <references refid="class_pot_r_z_1a62ad3a85a26b28fb94567f4e04895aee" compoundref="_pot_r_z_8_h" startline="53">PotRZ::M</references>
-        <references refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" compoundref="_pot_r_z_8_h" startline="22">N</references>
-        <references refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" compoundref="_pot_r_z_8_h" startline="23">v</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Compute the Hankel transform of the target density. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="1">
-        <label>PotRZ::Sk</label>
-        <link refid="class_pot_r_z_1_1_sk"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>v</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>QDHT</label>
-        <link refid="class_q_d_h_t"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/PotRZ.H" line="18" column="3" bodyfile="/home/weinberg/Projects/EXP/include/PotRZ.H" bodystart="19" bodyend="46"/>
-    <listofallmembers>
-      <member refid="class_pot_r_z_1_1_sk_1a87eef3d6d03e29318c04d6d3301d6bbb" prot="protected" virt="non-virtual"><scope>PotRZ::Sk</scope><name>N</name></member>
-      <member refid="class_pot_r_z_1_1_sk_1afde061a179f038a2394ff2135f523d91" prot="public" virt="non-virtual"><scope>PotRZ::Sk</scope><name>operator()</name></member>
-      <member refid="class_pot_r_z_1_1_sk_1a9b29e6af601361c3725faa652a6069e0" prot="public" virt="non-virtual"><scope>PotRZ::Sk</scope><name>Sk</name></member>
-      <member refid="class_pot_r_z_1_1_sk_1a1a01e40c1096829cbd337c6d89a14267" prot="public" virt="non-virtual"><scope>PotRZ::Sk</scope><name>Sk</name></member>
-      <member refid="class_pot_r_z_1_1_sk_1ace4a27a09732f4554a56a450b3e77275" prot="protected" virt="non-virtual"><scope>PotRZ::Sk</scope><name>v</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_pseudo_accel.xml b/doxyxml/class_pseudo_accel.xml
deleted file mode 100644
index 90de327..0000000
--- a/doxyxml/class_pseudo_accel.xml
+++ /dev/null
@@ -1,239 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_pseudo_accel" kind="class" language="C++" prot="public">
-    <compoundname>PseudoAccel</compoundname>
-    <includes refid="_pseudo_accel_8_h" local="no">PseudoAccel.H</includes>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_pseudo_accel_1a2c968e5f39fd1cca180f2cf267967e97" prot="private" static="no">
-        <type>std::array&lt; double, 7 &gt;</type>
-        <definition>using PseudoAccel::Elem =  std::array&lt;double, 7&gt;</definition>
-        <argsstring></argsstring>
-        <name>Elem</name>
-        <qualifiedname>PseudoAccel::Elem</qualifiedname>
-        <briefdescription>
-<para>Queue of elements. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="22" column="3" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_pseudo_accel_1afd910cc267ebd1580f41cbe5958720dd" prot="private" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d PseudoAccel::accel</definition>
-        <argsstring></argsstring>
-        <name>accel</name>
-        <qualifiedname>PseudoAccel::accel</qualifiedname>
-        <initializer>= Eigen::Vector3d::Zero()</initializer>
-        <briefdescription>
-<para>Storage. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="26" column="19" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="26" bodyend="-1"/>
-        <referencedby refid="class_pseudo_accel_1ab150a00fb5d1dbd3c046c0358dd1b26d" compoundref="_pseudo_accel_8_h" startline="42" endline="93">operator()</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pseudo_accel_1a558cb73adb4d7506a5aed2d6a6846083" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool PseudoAccel::AXIS</definition>
-        <argsstring></argsstring>
-        <name>AXIS</name>
-        <qualifiedname>PseudoAccel::AXIS</qualifiedname>
-        <initializer>=false</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="19" column="15" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="19" bodyend="-1"/>
-        <referencedby refid="class_pseudo_accel_1ab150a00fb5d1dbd3c046c0358dd1b26d" compoundref="_pseudo_accel_8_h" startline="42" endline="93">operator()</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_pseudo_accel_1a09e5dc197db913699f4e653d371ddaa3" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool PseudoAccel::CENTER</definition>
-        <argsstring></argsstring>
-        <name>CENTER</name>
-        <qualifiedname>PseudoAccel::CENTER</qualifiedname>
-        <initializer>=false</initializer>
-        <briefdescription>
-<para>Type flags. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="19" column="8" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="19" bodyend="-1"/>
-        <referencedby refid="class_pseudo_accel_1ab150a00fb5d1dbd3c046c0358dd1b26d" compoundref="_pseudo_accel_8_h" startline="42" endline="93">operator()</referencedby>
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-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d PseudoAccel::domdt</definition>
-        <argsstring></argsstring>
-        <name>domdt</name>
-        <qualifiedname>PseudoAccel::domdt</qualifiedname>
-        <initializer>= Eigen::Vector3d::Zero()</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="28" column="19" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="28" bodyend="-1"/>
-        <referencedby refid="class_pseudo_accel_1ab150a00fb5d1dbd3c046c0358dd1b26d" compoundref="_pseudo_accel_8_h" startline="42" endline="93">operator()</referencedby>
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-        <type>unsigned int</type>
-        <definition>unsigned int PseudoAccel::Nsize</definition>
-        <argsstring></argsstring>
-        <name>Nsize</name>
-        <qualifiedname>PseudoAccel::Nsize</qualifiedname>
-        <briefdescription>
-<para>Maximum number of time points. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="16" column="16" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="16" bodyend="-1"/>
-        <referencedby refid="class_pseudo_accel_1a483547ebb5c2e93b6e646ab8379a8231" compoundref="_pseudo_accel_8_h" startline="37" endline="40">add</referencedby>
-        <referencedby refid="class_pseudo_accel_1ab150a00fb5d1dbd3c046c0358dd1b26d" compoundref="_pseudo_accel_8_h" startline="42" endline="93">operator()</referencedby>
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-      <memberdef kind="variable" id="class_pseudo_accel_1a4ecc396017d4241e28a61a1c14527144" prot="private" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d PseudoAccel::omega</definition>
-        <argsstring></argsstring>
-        <name>omega</name>
-        <qualifiedname>PseudoAccel::omega</qualifiedname>
-        <initializer>= Eigen::Vector3d::Zero()</initializer>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="27" column="19" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="27" bodyend="-1"/>
-        <referencedby refid="class_pseudo_accel_1ab150a00fb5d1dbd3c046c0358dd1b26d" compoundref="_pseudo_accel_8_h" startline="42" endline="93">operator()</referencedby>
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-        <type>std::deque&lt; <ref refid="class_pseudo_accel_1a2c968e5f39fd1cca180f2cf267967e97" kindref="member">Elem</ref> &gt;</type>
-        <definition>std::deque&lt;Elem&gt; PseudoAccel::queue</definition>
-        <argsstring></argsstring>
-        <name>queue</name>
-        <qualifiedname>PseudoAccel::queue</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="23" column="14" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="23" bodyend="-1"/>
-        <referencedby refid="class_pseudo_accel_1a483547ebb5c2e93b6e646ab8379a8231" compoundref="_pseudo_accel_8_h" startline="37" endline="40">add</referencedby>
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-    <sectiondef kind="public-func">
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-        <type>void</type>
-        <definition>void PseudoAccel::add</definition>
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-        <name>add</name>
-        <qualifiedname>PseudoAccel::add</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>t</declname>
-        </param>
-        <param>
-          <type>const Eigen::Vector3d &amp;</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>const Eigen::Vector3d &amp;</type>
-          <declname>a</declname>
-        </param>
-        <briefdescription>
-<para>Add a center element to the pseudo accelration estimator. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="37" column="8" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="37" bodyend="40"/>
-        <references refid="class_pseudo_accel_1a2bf7ed60fa31de425d1cb0bd8bb258e0" compoundref="_pseudo_accel_8_h" startline="16">Nsize</references>
-        <references refid="class_pseudo_accel_1a005a23323c3af89dfed3a66efe9def80" compoundref="_pseudo_accel_8_h" startline="23">queue</references>
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-        <type>std::tuple&lt; Eigen::Vector3d &amp;, Eigen::Vector3d &amp;, Eigen::Vector3d &amp; &gt;</type>
-        <definition>std::tuple&lt; Eigen::Vector3d &amp;, Eigen::Vector3d &amp;, Eigen::Vector3d &amp; &gt; PseudoAccel::operator()</definition>
-        <argsstring>()</argsstring>
-        <name>operator()</name>
-        <qualifiedname>PseudoAccel::operator()</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="42" column="14" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="42" bodyend="93"/>
-        <references refid="class_pseudo_accel_1afd910cc267ebd1580f41cbe5958720dd" compoundref="_pseudo_accel_8_h" startline="26">accel</references>
-        <references refid="class_pseudo_accel_1a558cb73adb4d7506a5aed2d6a6846083" compoundref="_pseudo_accel_8_h" startline="19">AXIS</references>
-        <references refid="class_pseudo_accel_1a09e5dc197db913699f4e653d371ddaa3" compoundref="_pseudo_accel_8_h" startline="19">CENTER</references>
-        <references refid="class_quad_l_s_1a70d3b25ce9c4cc3105182ef4c8fb303b" compoundref="_quad_l_s_8_h" startline="66" endline="67">QuadLS&lt; T &gt;::coefs</references>
-        <references refid="class_pseudo_accel_1afd07432015f7f62bdf952fd2160a0b0e" compoundref="_pseudo_accel_8_h" startline="28">domdt</references>
-        <references refid="class_pseudo_accel_1a2bf7ed60fa31de425d1cb0bd8bb258e0" compoundref="_pseudo_accel_8_h" startline="16">Nsize</references>
-        <references refid="class_pseudo_accel_1a4ecc396017d4241e28a61a1c14527144" compoundref="_pseudo_accel_8_h" startline="27">omega</references>
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-        <type></type>
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-        <param>
-          <type>unsigned int</type>
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-        <param>
-          <type>bool</type>
-          <declname>center</declname>
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-        <param>
-          <type>bool</type>
-          <declname>axis</declname>
-        </param>
-        <briefdescription>
-<para>Construct a pseudo acceleration estimator. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="33" column="3" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="33" bodyend="34"/>
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-    <location file="/home/weinberg/Projects/EXP/include/PseudoAccel.H" line="11" column="1" bodyfile="/home/weinberg/Projects/EXP/include/PseudoAccel.H" bodystart="12" bodyend="94"/>
-    <listofallmembers>
-      <member refid="class_pseudo_accel_1afd910cc267ebd1580f41cbe5958720dd" prot="private" virt="non-virtual"><scope>PseudoAccel</scope><name>accel</name></member>
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diff --git a/doxyxml/class_py_model.xml b/doxyxml/class_py_model.xml
deleted file mode 100644
index e8b99bb..0000000
--- a/doxyxml/class_py_model.xml
+++ /dev/null
@@ -1,119 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_py_model" kind="class" language="C++" prot="public">
-    <compoundname>PyModel</compoundname>
-    <basecompoundref refid="class_emp_cyl_s_l_1_1_axi_disk" prot="public" virt="non-virtual">EmpCylSL::AxiDisk</basecompoundref>
-    <includes refid="_disk_models_8_h" local="no">DiskModels.H</includes>
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-        <type>std::shared_ptr&lt; DiskDensityFunc &gt;</type>
-        <definition>std::shared_ptr&lt;DiskDensityFunc&gt; PyModel::pyDens</definition>
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-        <name>pyDens</name>
-        <qualifiedname>PyModel::pyDens</qualifiedname>
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-        </briefdescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskModels.H" line="264" column="19" bodyfile="/home/weinberg/Projects/EXP/include/DiskModels.H" bodystart="264" bodyend="-1"/>
-        <referencedby refid="class_py_model_1a565a4d630b7c6bab5f5c2e1de9b46959" compoundref="_disk_models_8_h" startline="273" endline="276">operator()</referencedby>
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-        <type>double</type>
-        <definition>double PyModel::operator()</definition>
-        <argsstring>(double R, double z, double phi=0.)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>PyModel::operator()</qualifiedname>
-        <reimplements refid="class_emp_cyl_s_l_1_1_axi_disk_1a1ed84b13e59c6571fd49aeb90c452675">operator()</reimplements>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
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-        <param>
-          <type>double</type>
-          <declname>z</declname>
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-        <param>
-          <type>double</type>
-          <declname>phi</declname>
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-<para>Density function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskModels.H" line="273" column="10" bodyfile="/home/weinberg/Projects/EXP/include/DiskModels.H" bodystart="273" bodyend="276"/>
-        <references refid="class_py_model_1ae0f3d3b73e012999b128797e3eb9cc97" compoundref="_disk_models_8_h" startline="264">pyDens</references>
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-        <type></type>
-        <definition>PyModel::PyModel</definition>
-        <argsstring>(std::string &amp;pyname)</argsstring>
-        <name>PyModel</name>
-        <qualifiedname>PyModel::PyModel</qualifiedname>
-        <param>
-          <type>std::string &amp;</type>
-          <declname>pyname</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/DiskModels.H" line="268" column="3" bodyfile="/home/weinberg/Projects/EXP/include/DiskModels.H" bodystart="268" bodyend="271"/>
-        <references refid="class_py_model_1ae0f3d3b73e012999b128797e3eb9cc97" compoundref="_disk_models_8_h" startline="264">pyDens</references>
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-    <briefdescription>
-<para>A user-defined Python model. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>EmpCylSL::AxiDisk</label>
-        <link refid="class_emp_cyl_s_l_1_1_axi_disk"/>
-      </node>
-      <node id="1">
-        <label>PyModel</label>
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-        <label>PyModel</label>
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-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/DiskModels.H" line="260" column="1" bodyfile="/home/weinberg/Projects/EXP/include/DiskModels.H" bodystart="261" bodyend="278"/>
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-      <member refid="class_py_model_1ae0f3d3b73e012999b128797e3eb9cc97" prot="private" virt="non-virtual"><scope>PyModel</scope><name>pyDens</name></member>
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diff --git a/doxyxml/class_q_d_h_t.xml b/doxyxml/class_q_d_h_t.xml
deleted file mode 100644
index e5d299a..0000000
--- a/doxyxml/class_q_d_h_t.xml
+++ /dev/null
@@ -1,387 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_q_d_h_t" kind="class" language="C++" prot="public">
-    <compoundname>QDHT</compoundname>
-    <includes refid="_q_d_h_t_8_h" local="no">QDHT.H</includes>
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-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd QDHT::Jp</definition>
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-        <name>Jp</name>
-        <qualifiedname>QDHT::Jp</qualifiedname>
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-<para>Jp vector. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="47" column="19" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="47" bodyend="-1"/>
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-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="44" column="21" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="44" bodyend="-1"/>
-        <referencedby refid="class_q_d_h_t_1a544bb6c7f92c9b89b14e77893a384a3b" compoundref="_q_d_h_t_8_h" startline="78" endline="78">getK</referencedby>
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-        <type>int</type>
-        <definition>int QDHT::N</definition>
-        <argsstring></argsstring>
-        <name>N</name>
-        <qualifiedname>QDHT::N</qualifiedname>
-        <briefdescription>
-<para>N is number of knots. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="29" column="7" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="29" bodyend="-1"/>
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-        <definition>double QDHT::nu</definition>
-        <argsstring></argsstring>
-        <name>nu</name>
-        <qualifiedname>QDHT::nu</qualifiedname>
-        <briefdescription>
-<para>nu is <ref refid="class_bessel" kindref="compound">Bessel</ref> function order </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="26" column="10" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="26" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_q_d_h_t_1ad350bcdbde90afc8c1ad8cbfb30d9e40" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double QDHT::R</definition>
-        <argsstring></argsstring>
-        <name>R</name>
-        <qualifiedname>QDHT::R</qualifiedname>
-        <briefdescription>
-<para>Dimension 1 scale. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="35" column="10" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_q_d_h_t_1a2bb30d6ed32fa4a76dfd913abe6a8426" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd QDHT::r</definition>
-        <argsstring></argsstring>
-        <name>r</name>
-        <qualifiedname>QDHT::r</qualifiedname>
-        <briefdescription>
-<para>R and K vectors. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="44" column="19" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="44" bodyend="-1"/>
-        <referencedby refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" compoundref="_q_d_h_t_8_h" startline="75" endline="75">getR</referencedby>
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-        <type>double</type>
-        <definition>double QDHT::S</definition>
-        <argsstring></argsstring>
-        <name>S</name>
-        <qualifiedname>QDHT::S</qualifiedname>
-        <briefdescription>
-<para>Total bandwidth. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="38" column="10" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="38" bodyend="-1"/>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd QDHT::T</definition>
-        <argsstring></argsstring>
-        <name>T</name>
-        <qualifiedname>QDHT::T</qualifiedname>
-        <briefdescription>
-<para>Transform matrix. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="50" column="19" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="50" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double QDHT::V</definition>
-        <argsstring></argsstring>
-        <name>V</name>
-        <qualifiedname>QDHT::V</qualifiedname>
-        <briefdescription>
-<para>Dimension 2 scale. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="41" column="10" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_q_d_h_t_1abe2b9013a76fc60975234f27a84d85be" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd QDHT::zeros</definition>
-        <argsstring></argsstring>
-        <name>zeros</name>
-        <qualifiedname>QDHT::zeros</qualifiedname>
-        <briefdescription>
-<para>Will contain the zeros of the <ref refid="class_bessel" kindref="compound">Bessel</ref> function of order nu. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="32" column="19" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
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-        <type>bool</type>
-        <definition>bool QDHT::debug</definition>
-        <argsstring></argsstring>
-        <name>debug</name>
-        <qualifiedname>QDHT::debug</qualifiedname>
-        <briefdescription>
-<para>For checking unitarity (default: false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="54" column="15" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="54" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
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-        <type>void</type>
-        <definition>void QDHT::check</definition>
-        <argsstring>()</argsstring>
-        <name>check</name>
-        <qualifiedname>QDHT::check</qualifiedname>
-        <briefdescription>
-<para>Check solution. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="81" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_q_d_h_t_1a544bb6c7f92c9b89b14e77893a384a3b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>const Eigen::VectorXd &amp;</type>
-        <definition>const Eigen::VectorXd &amp; QDHT::getK</definition>
-        <argsstring>()</argsstring>
-        <name>getK</name>
-        <qualifiedname>QDHT::getK</qualifiedname>
-        <briefdescription>
-<para>Compute the transform coordinates (e.g. spatial frequencies) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="78" column="25" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="78" bodyend="78"/>
-        <references refid="class_q_d_h_t_1a4f2f28e649bd561f522665157db2de42" compoundref="_q_d_h_t_8_h" startline="44">k</references>
-        <referencedby refid="class_pot_r_z_1_1_sk_1afde061a179f038a2394ff2135f523d91" compoundref="_pot_r_z_8_h" startline="39" endline="45">PotRZ::Sk::operator()</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>const Eigen::VectorXd &amp;</type>
-        <definition>const Eigen::VectorXd &amp; QDHT::getR</definition>
-        <argsstring>()</argsstring>
-        <name>getR</name>
-        <qualifiedname>QDHT::getR</qualifiedname>
-        <briefdescription>
-<para>Compute the input coordinates (e.g. radii) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="75" column="25" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="75" bodyend="75"/>
-        <references refid="class_q_d_h_t_1a2bb30d6ed32fa4a76dfd913abe6a8426" compoundref="_q_d_h_t_8_h" startline="44">r</references>
-        <referencedby refid="class_pot_r_z_1a7b01917cb94ccc4e139f831f85f1cded" compoundref="_pot_r_z_8_h" startline="73" endline="111">PotRZ::operator()</referencedby>
-        <referencedby refid="class_pot_r_z_1_1_sk_1afde061a179f038a2394ff2135f523d91" compoundref="_pot_r_z_8_h" startline="39" endline="45">PotRZ::Sk::operator()</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_q_d_h_t_1a1d7d6dc619bcf5b232db6a06052786ea" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double QDHT::operator()</definition>
-        <argsstring>(double r, Eigen::VectorXd &amp;v)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>QDHT::operator()</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>v</declname>
-        </param>
-        <briefdescription>
-<para>Inverse Hankel transform at r. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="72" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_q_d_h_t_1a6522df4c3a36e4f3f4368c889aacd7c4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd QDHT::operator()</definition>
-        <argsstring>(Eigen::VectorXd &amp;v, bool forward=true)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>QDHT::operator()</qualifiedname>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>v</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>forward</declname>
-          <defval>true</defval>
-        </param>
-        <briefdescription>
-<para>Compute the forward or backward Hankel transform. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="69" column="19"/>
-      </memberdef>
-      <memberdef kind="function" id="class_q_d_h_t_1a2e7abe4211e480193147f33e1265ad4f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>QDHT::QDHT</definition>
-        <argsstring>()</argsstring>
-        <name>QDHT</name>
-        <qualifiedname>QDHT::QDHT</qualifiedname>
-        <briefdescription>
-<para>Null constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="57" column="3" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="57" bodyend="57"/>
-      </memberdef>
-      <memberdef kind="function" id="class_q_d_h_t_1a1c39b08bbdf5d2cbaac7899178c2054a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>QDHT::QDHT</definition>
-        <argsstring>(int M, int N, double R)</argsstring>
-        <name>QDHT</name>
-        <qualifiedname>QDHT::QDHT</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>M</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>M</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>N</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of knots </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>R</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radius at which the input function is zero </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="63" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_q_d_h_t_1a7932acbac720db1014040776691c58a5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>QDHT::~QDHT</definition>
-        <argsstring>()</argsstring>
-        <name>~QDHT</name>
-        <qualifiedname>QDHT::~QDHT</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="66" column="3" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="66" bodyend="66"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Hankel transform based on the <ref refid="class_q_d_h_t" kindref="compound">QDHT</ref> algorithm</para>
-<para>See: &quot;Computation of quasi-discrete Hankel transforms of the integer
-order for propagating optical wave fields&quot; Manuel Guizar-Sicairos and Julio C. Guitierrez-Vega J. Opt. Soc. Am. A 21 (1) 53-58 (2004) </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/QDHT.H" line="22" column="1" bodyfile="/home/weinberg/Projects/EXP/include/QDHT.H" bodystart="23" bodyend="82"/>
-    <listofallmembers>
-      <member refid="class_q_d_h_t_1a36c39f3231a2b6576a8b22ea93c12bf5" prot="public" virt="non-virtual"><scope>QDHT</scope><name>check</name></member>
-      <member refid="class_q_d_h_t_1a32f95b71d2282c91ad1bd73a298d9415" prot="public" virt="non-virtual"><scope>QDHT</scope><name>debug</name></member>
-      <member refid="class_q_d_h_t_1a544bb6c7f92c9b89b14e77893a384a3b" prot="public" virt="non-virtual"><scope>QDHT</scope><name>getK</name></member>
-      <member refid="class_q_d_h_t_1a3698a331a45c81e36acc1b23e8e51861" prot="public" virt="non-virtual"><scope>QDHT</scope><name>getR</name></member>
-      <member refid="class_q_d_h_t_1a8ee835705733e89ef097c315fdaca455" prot="private" virt="non-virtual"><scope>QDHT</scope><name>Jp</name></member>
-      <member refid="class_q_d_h_t_1a4f2f28e649bd561f522665157db2de42" prot="private" virt="non-virtual"><scope>QDHT</scope><name>k</name></member>
-      <member refid="class_q_d_h_t_1ab07dcd2fae26d4bab6478e059f916a05" prot="private" virt="non-virtual"><scope>QDHT</scope><name>N</name></member>
-      <member refid="class_q_d_h_t_1a6f81dbb61d456d837817e0053f3c2642" prot="private" virt="non-virtual"><scope>QDHT</scope><name>nu</name></member>
-      <member refid="class_q_d_h_t_1a6522df4c3a36e4f3f4368c889aacd7c4" prot="public" virt="non-virtual"><scope>QDHT</scope><name>operator()</name></member>
-      <member refid="class_q_d_h_t_1a1d7d6dc619bcf5b232db6a06052786ea" prot="public" virt="non-virtual"><scope>QDHT</scope><name>operator()</name></member>
-      <member refid="class_q_d_h_t_1a2e7abe4211e480193147f33e1265ad4f" prot="public" virt="non-virtual"><scope>QDHT</scope><name>QDHT</name></member>
-      <member refid="class_q_d_h_t_1a1c39b08bbdf5d2cbaac7899178c2054a" prot="public" virt="non-virtual"><scope>QDHT</scope><name>QDHT</name></member>
-      <member refid="class_q_d_h_t_1a2bb30d6ed32fa4a76dfd913abe6a8426" prot="private" virt="non-virtual"><scope>QDHT</scope><name>r</name></member>
-      <member refid="class_q_d_h_t_1ad350bcdbde90afc8c1ad8cbfb30d9e40" prot="private" virt="non-virtual"><scope>QDHT</scope><name>R</name></member>
-      <member refid="class_q_d_h_t_1a89c0fd5b8e935c6dfd211a552c75491f" prot="private" virt="non-virtual"><scope>QDHT</scope><name>S</name></member>
-      <member refid="class_q_d_h_t_1a82780d3255fae4851e5af3f1431ab33c" prot="private" virt="non-virtual"><scope>QDHT</scope><name>T</name></member>
-      <member refid="class_q_d_h_t_1a4b2903fc891ffffa654cbf47d1a3a1b9" prot="private" virt="non-virtual"><scope>QDHT</scope><name>V</name></member>
-      <member refid="class_q_d_h_t_1abe2b9013a76fc60975234f27a84d85be" prot="private" virt="non-virtual"><scope>QDHT</scope><name>zeros</name></member>
-      <member refid="class_q_d_h_t_1a7932acbac720db1014040776691c58a5" prot="public" virt="non-virtual"><scope>QDHT</scope><name>~QDHT</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_q_p_dist_f.xml b/doxyxml/class_q_p_dist_f.xml
deleted file mode 100644
index 3d4acea..0000000
--- a/doxyxml/class_q_p_dist_f.xml
+++ /dev/null
@@ -1,1866 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_q_p_dist_f" kind="class" language="C++" prot="public">
-    <compoundname>QPDistF</compoundname>
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-        <argsstring></argsstring>
-        <name>elem</name>
-        <qualifiedname>QPDistF::elem</qualifiedname>
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-        <definition>typedef pair&lt;int, int&gt; QPDistF::ip</definition>
-        <argsstring></argsstring>
-        <name>ip</name>
-        <qualifiedname>QPDistF::ip</qualifiedname>
-        <briefdescription>
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-          <declname>x0</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y0</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>sx</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>sy</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-    </sectiondef>
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-        <type>void</type>
-        <definition>void QPDistF::compute_distribution</definition>
-        <argsstring>(void)</argsstring>
-        <name>compute_distribution</name>
-        <qualifiedname>QPDistF::compute_distribution</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double QPDistF::d2fdE2</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>d2fdE2</name>
-        <qualifiedname>QPDistF::d2fdE2</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double QPDistF::d2fdE2_EK</definition>
-        <argsstring>(double E, double K)</argsstring>
-        <name>d2fdE2_EK</name>
-        <qualifiedname>QPDistF::d2fdE2_EK</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>K</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double QPDistF::d2fdEK_EK</definition>
-        <argsstring>(double E, double K)</argsstring>
-        <name>d2fdEK_EK</name>
-        <qualifiedname>QPDistF::d2fdEK_EK</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>K</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QPDistF.H" line="148" column="10"/>
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-        <type>double</type>
-        <definition>double QPDistF::d2fdK2_EK</definition>
-        <argsstring>(double E, double K)</argsstring>
-        <name>d2fdK2_EK</name>
-        <qualifiedname>QPDistF::d2fdK2_EK</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>K</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QPDistF.H" line="147" column="10"/>
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-        <type>double</type>
-        <definition>double QPDistF::dfdE</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfdE</name>
-        <qualifiedname>QPDistF::dfdE</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QPDistF.H" line="139" column="10"/>
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-        <type>double</type>
-        <definition>double QPDistF::dfdE_EK</definition>
-        <argsstring>(double E, double K)</argsstring>
-        <name>dfdE_EK</name>
-        <qualifiedname>QPDistF::dfdE_EK</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>K</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QPDistF.H" line="144" column="10"/>
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-        <type>double</type>
-        <definition>double QPDistF::dfdK_EK</definition>
-        <argsstring>(double E, double K)</argsstring>
-        <name>dfdK_EK</name>
-        <qualifiedname>QPDistF::dfdK_EK</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>K</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QPDistF.H" line="145" column="10"/>
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-      <memberdef kind="function" id="class_q_p_dist_f_1ad58b5c3e556e2d998e77d322ddb740ce" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double QPDistF::dfdL</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfdL</name>
-        <qualifiedname>QPDistF::dfdL</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QPDistF.H" line="140" column="10"/>
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-        <type>double</type>
-        <definition>double QPDistF::distf</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>distf</name>
-        <qualifiedname>QPDistF::distf</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QPDistF.H" line="138" column="10"/>
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-        <type>double</type>
-        <definition>double QPDistF::distf_EK</definition>
-        <argsstring>(double E, double K)</argsstring>
-        <name>distf_EK</name>
-        <qualifiedname>QPDistF::distf_EK</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>K</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>void</type>
-        <definition>void QPDistF::dump_cdf</definition>
-        <argsstring>(const string &amp;file)</argsstring>
-        <name>dump_cdf</name>
-        <qualifiedname>QPDistF::dump_cdf</qualifiedname>
-        <param>
-          <type>const string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>pair&lt; double, double &gt;</type>
-        <definition>pair&lt; double, double &gt; QPDistF::gen_EK</definition>
-        <argsstring>(double r1, double r2)</argsstring>
-        <name>gen_EK</name>
-        <qualifiedname>QPDistF::gen_EK</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r1</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r2</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <type>void</type>
-        <definition>void QPDistF::get_objective</definition>
-        <argsstring>(double *OBJ0, double *OBJ, int *IFLG)</argsstring>
-        <name>get_objective</name>
-        <qualifiedname>QPDistF::get_objective</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>OBJ0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>OBJ</declname>
-        </param>
-        <param>
-          <type>int *</type>
-          <declname>IFLG</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_q_p_dist_f_1ad0519a78caef72228eeff75c971c3887" compoundref="_q_p_dist_f_8_h" startline="43">IFAIL</references>
-        <references refid="class_q_p_dist_f_1a7e9fa5658d839fe84ed9335a236d39bc" compoundref="_q_p_dist_f_8_h" startline="42">obj</references>
-        <references refid="class_q_p_dist_f_1a19c124794a171c2c2431b5a20e8377e4" compoundref="_q_p_dist_f_8_h" startline="40">obj0</references>
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-        <type>void</type>
-        <definition>void QPDistF::make_cdf</definition>
-        <argsstring>(int ENUM, int KNUM, double KTOL=1.0e-3)</argsstring>
-        <name>make_cdf</name>
-        <qualifiedname>QPDistF::make_cdf</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>ENUM</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>KNUM</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>KTOL</declname>
-          <defval>1.0e-3</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type></type>
-        <definition>QPDistF::QPDistF</definition>
-        <argsstring>(AxiSymModPtr T, AxiSymModPtr H, double rmmax, double remax, int egrid, int kgrid, int mgrid, double sigma=2.0, double lambda=0.0, double alpha=-4.0, double beta=1.0, double gama=1.0, double roff=0.01, double eoff=0.5, double koff=0.5, double kmin=0.0, double kmax=1.0, int nint=80, int numt=40)</argsstring>
-        <name>QPDistF</name>
-        <qualifiedname>QPDistF::QPDistF</qualifiedname>
-        <param>
-          <type><ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref></type>
-          <declname>T</declname>
-        </param>
-        <param>
-          <type><ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref></type>
-          <declname>H</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>remax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>egrid</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>kgrid</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>mgrid</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>sigma</declname>
-          <defval>2.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>lambda</declname>
-          <defval>0.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>alpha</declname>
-          <defval>-4.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>beta</declname>
-          <defval>1.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>gama</declname>
-          <defval>1.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>roff</declname>
-          <defval>0.01</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>eoff</declname>
-          <defval>0.5</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>koff</declname>
-          <defval>0.5</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>kmin</declname>
-          <defval>0.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>kmax</declname>
-          <defval>1.0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nint</declname>
-          <defval>80</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numt</declname>
-          <defval>40</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>T</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is a pointer to an axisymmetric model (2 or 3 dim) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>H</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is a pointer to an axisymmetric model (3-d halo) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radius for the radial QP grid </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>remax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>determines the maximum energy Phi(remax) for the energy grid </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>egrid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of energy knots for Gaussian kernels </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>kgrid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of kappa knots for Gaussian kernels </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mgrid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of radial knots for density evaluation </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>sigma</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the fraction over the spacing for the kernel width </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>lambda</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the penalty coefficient in powers of kappa </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>alpha</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the exponent for powers of kappa </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>beta</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the power law exponent for radial-grid spacing in mass fraction </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>gama</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the power law exponent for energy-grid spacing </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>roff</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the offset of the mass zero point </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>eoff</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the offset of the energy grid from Emin </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>koff</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the offset of the energy grid from Kmin </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>kmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum value of kappa </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>kmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum value of kappa </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of knots in the velocity magnitude integral </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numt</parametername>
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diff --git a/doxyxml/class_quad_l_s.xml b/doxyxml/class_quad_l_s.xml
deleted file mode 100644
index 26f4e00..0000000
--- a/doxyxml/class_quad_l_s.xml
+++ /dev/null
@@ -1,141 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_quad_l_s" kind="class" language="C++" prot="public">
-    <compoundname>QuadLS</compoundname>
-    <includes refid="_quad_l_s_8_h" local="no">QuadLS.H</includes>
-    <templateparamlist>
-      <param>
-        <type>typename T</type>
-      </param>
-    </templateparamlist>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_quad_l_s_1ae32cf3f6bb08588f6c9f87aa7cda073c" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void QuadLS&lt; T &gt;::fit</definition>
-        <argsstring>(const T &amp;x, const T &amp;y)</argsstring>
-        <name>fit</name>
-        <qualifiedname>QuadLS::fit</qualifiedname>
-        <param>
-          <type>const T &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const T &amp;</type>
-          <declname>y</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/QuadLS.H" line="15" column="8" bodyfile="/home/weinberg/Projects/EXP/include/QuadLS.H" bodystart="15" bodyend="51"/>
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-        <type>std::tuple&lt; double, double, double &gt;</type>
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-        <name>coefs</name>
-        <qualifiedname>QuadLS::coefs</qualifiedname>
-        <briefdescription>
-<para>Access coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QuadLS.H" line="66" column="14" bodyfile="/home/weinberg/Projects/EXP/include/QuadLS.H" bodystart="66" bodyend="67"/>
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-        <type>double</type>
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-        <qualifiedname>QuadLS::operator()</qualifiedname>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
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-        <briefdescription>
-<para>Evaluate the quadratic function. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QuadLS.H" line="70" column="10" bodyfile="/home/weinberg/Projects/EXP/include/QuadLS.H" bodystart="70" bodyend="71"/>
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-        <type></type>
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-        <argsstring>()</argsstring>
-        <name>QuadLS</name>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QuadLS.H" line="56" column="3" bodyfile="/home/weinberg/Projects/EXP/include/QuadLS.H" bodystart="56" bodyend="56"/>
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-        <type></type>
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-<para>Constructor. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/QuadLS.H" line="59" column="3" bodyfile="/home/weinberg/Projects/EXP/include/QuadLS.H" bodystart="59" bodyend="60"/>
-        <references refid="class_quad_l_s_1ae32cf3f6bb08588f6c9f87aa7cda073c" compoundref="_quad_l_s_8_h" startline="15" endline="51">QuadLS&lt; T &gt;::fit</references>
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-        <type></type>
-        <definition>virtual QuadLS&lt; T &gt;::~QuadLS</definition>
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-        <name>~QuadLS</name>
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-<para>Destructor. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/QuadLS.H" line="63" column="11" bodyfile="/home/weinberg/Projects/EXP/include/QuadLS.H" bodystart="63" bodyend="63"/>
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-      <member refid="class_quad_l_s_1a70d3b25ce9c4cc3105182ef4c8fb303b" prot="public" virt="non-virtual"><scope>QuadLS</scope><name>coefs</name></member>
-      <member refid="class_quad_l_s_1ae32cf3f6bb08588f6c9f87aa7cda073c" prot="private" virt="non-virtual"><scope>QuadLS</scope><name>fit</name></member>
-      <member refid="class_quad_l_s_1a68b18fc2d798d77a00cc1867b6e65e4b" prot="public" virt="non-virtual"><scope>QuadLS</scope><name>operator()</name></member>
-      <member refid="class_quad_l_s_1a49807fc0f13383e2460af429d5ae6091" prot="public" virt="non-virtual"><scope>QuadLS</scope><name>QuadLS</name></member>
-      <member refid="class_quad_l_s_1a159770a829d10a64d363262cef3176b5" prot="public" virt="non-virtual"><scope>QuadLS</scope><name>QuadLS</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_quadrupole___bar.xml b/doxyxml/class_quadrupole___bar.xml
deleted file mode 100644
index 172df9d..0000000
--- a/doxyxml/class_quadrupole___bar.xml
+++ /dev/null
@@ -1,115 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_quadrupole___bar" kind="class" language="C++" prot="public">
-    <compoundname>Quadrupole_Bar</compoundname>
-    <includes refid="models_8_h" local="no">models.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_quadrupole___bar_1a961f80cc93358cba6a2034b2a0a1e662" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Quadrupole_Bar::a2</definition>
-        <argsstring></argsstring>
-        <name>a2</name>
-        <qualifiedname>Quadrupole_Bar::a2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="257" column="13" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="257" bodyend="-1"/>
-        <referencedby refid="class_quadrupole___bar_1aa4e7a384b67d0010bed1623cecdc3d15" compoundref="models_8_h" startline="259" endline="263">set_Quadrupole_Bar</referencedby>
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-        <type>double</type>
-        <definition>double Quadrupole_Bar::GQ</definition>
-        <argsstring></argsstring>
-        <name>GQ</name>
-        <qualifiedname>Quadrupole_Bar::GQ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="257" column="10" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="257" bodyend="-1"/>
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-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d Quadrupole_Bar::force</definition>
-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
-        <name>force</name>
-        <qualifiedname>Quadrupole_Bar::force</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="266" column="19"/>
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-        <type>double</type>
-        <definition>double Quadrupole_Bar::potential</definition>
-        <argsstring>(Eigen::Vector3d &amp;)</argsstring>
-        <name>potential</name>
-        <qualifiedname>Quadrupole_Bar::potential</qualifiedname>
-        <param>
-          <type>Eigen::Vector3d &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="265" column="10"/>
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-      <memberdef kind="function" id="class_quadrupole___bar_1aa4e7a384b67d0010bed1623cecdc3d15" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void Quadrupole_Bar::set_Quadrupole_Bar</definition>
-        <argsstring>(double G, double Q, double length)</argsstring>
-        <name>set_Quadrupole_Bar</name>
-        <qualifiedname>Quadrupole_Bar::set_Quadrupole_Bar</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>G</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Q</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>length</declname>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/models.H" line="259" column="8" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="259" bodyend="263"/>
-        <references refid="class_quadrupole___bar_1a961f80cc93358cba6a2034b2a0a1e662" compoundref="models_8_h" startline="257">a2</references>
-        <references refid="class_quadrupole___bar_1a02182ada8a08b4988e9545213d215222" compoundref="models_8_h" startline="257">GQ</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
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-    <detaileddescription>
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-    <location file="/home/weinberg/Projects/EXP/include/models.H" line="254" column="1" bodyfile="/home/weinberg/Projects/EXP/include/models.H" bodystart="255" bodyend="267"/>
-    <listofallmembers>
-      <member refid="class_quadrupole___bar_1a961f80cc93358cba6a2034b2a0a1e662" prot="protected" virt="non-virtual"><scope>Quadrupole_Bar</scope><name>a2</name></member>
-      <member refid="class_quadrupole___bar_1a9b8db538046a54d13f8d7856057689ae" prot="public" virt="non-virtual"><scope>Quadrupole_Bar</scope><name>force</name></member>
-      <member refid="class_quadrupole___bar_1a02182ada8a08b4988e9545213d215222" prot="protected" virt="non-virtual"><scope>Quadrupole_Bar</scope><name>GQ</name></member>
-      <member refid="class_quadrupole___bar_1acca0ab610490f1d12c0767c61ce758df" prot="public" virt="non-virtual"><scope>Quadrupole_Bar</scope><name>potential</name></member>
-      <member refid="class_quadrupole___bar_1aa4e7a384b67d0010bed1623cecdc3d15" prot="public" virt="non-virtual"><scope>Quadrupole_Bar</scope><name>set_Quadrupole_Bar</name></member>
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diff --git a/doxyxml/class_r_u_n.xml b/doxyxml/class_r_u_n.xml
deleted file mode 100644
index ea10446..0000000
--- a/doxyxml/class_r_u_n.xml
+++ /dev/null
@@ -1,128 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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diff --git a/doxyxml/class_regular_orbit.xml b/doxyxml/class_regular_orbit.xml
deleted file mode 100644
index 17a8027..0000000
--- a/doxyxml/class_regular_orbit.xml
+++ /dev/null
@@ -1,318 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_regular_orbit" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>RegularOrbit</compoundname>
-    <derivedcompoundref refid="class_spherical_orbit" prot="public" virt="non-virtual">SphericalOrbit</derivedcompoundref>
-    <includes refid="orbit_8_h" local="no">orbit.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_regular_orbit_1a36731e792d0e5f2d0ffbb92fcfdc9ea9" prot="public" static="no" mutable="no">
-        <type>Eigen::Vector3d</type>
-        <definition>Eigen::Vector3d RegularOrbit::action</definition>
-        <argsstring></argsstring>
-        <name>action</name>
-        <qualifiedname>RegularOrbit::action</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="25" column="19" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="25" bodyend="-1"/>
-        <referencedby refid="class_spherical_orbit_1a1d4224e324c4b8884ce49799c9c6398a" compoundref="orbit_8_h" startline="131" endline="138">SphericalOrbit::get_action</referencedby>
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-        <qualifiedname>RegularOrbit::angle_defined</qualifiedname>
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-        <qualifiedname>RegularOrbit::biorth_defined</qualifiedname>
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-      <member refid="class_regular_orbit_1a6d582e67d7baeece1ffc2e75a8ccaaf3" prot="public" virt="non-virtual"><scope>RegularOrbit</scope><name>dof</name></member>
-      <member refid="class_regular_orbit_1aa2af630a8524ec47bc107215fc493aa9" prot="public" virt="non-virtual"><scope>RegularOrbit</scope><name>freq</name></member>
-      <member refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" prot="public" virt="non-virtual"><scope>RegularOrbit</scope><name>freq_defined</name></member>
-      <member refid="class_regular_orbit_1a2452e833ddea6e4536356a441d3f96f2" prot="public" virt="pure-virtual"><scope>RegularOrbit</scope><name>get_action</name></member>
-      <member refid="class_regular_orbit_1a54adbdf914ec384fa91076183d57865c" prot="public" virt="pure-virtual"><scope>RegularOrbit</scope><name>get_angle</name></member>
-      <member refid="class_regular_orbit_1a9a65442827224e08daf0d2b06e49cbcb" prot="public" virt="pure-virtual"><scope>RegularOrbit</scope><name>get_freq</name></member>
-      <member refid="class_regular_orbit_1ad09e56aa5ed439ccffd9aeb6e47ab658" prot="public" virt="non-virtual"><scope>RegularOrbit</scope><name>model_defined</name></member>
-      <member refid="class_regular_orbit_1a760c90fee34d09e367986807378ada81" prot="public" virt="non-virtual"><scope>RegularOrbit</scope><name>OrbitID</name></member>
-      <member refid="class_regular_orbit_1a30d745503e523915a2e3375dac289ea2" prot="public" virt="non-virtual"><scope>RegularOrbit</scope><name>warn</name></member>
-      <member refid="class_regular_orbit_1ad8ba95ec71344964d1be3fc3b1fd9e78" prot="public" virt="virtual"><scope>RegularOrbit</scope><name>~RegularOrbit</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_ring_iterator.xml b/doxyxml/class_ring_iterator.xml
deleted file mode 100644
index 39fb6e9..0000000
--- a/doxyxml/class_ring_iterator.xml
+++ /dev/null
@@ -1,469 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_ring_iterator" kind="class" language="C++" prot="public">
-    <compoundname>RingIterator</compoundname>
-    <includes refid="_circular_8_h" local="no">Circular.H</includes>
-    <templateparamlist>
-      <param>
-        <type>typename T</type>
-      </param>
-      <param>
-        <type>typename Container</type>
-        <defval>std::vector&lt;T&gt;</defval>
-      </param>
-      <param>
-        <type>typename <ref refid="struct_iterator" kindref="compound">Iterator</ref></type>
-        <defval>typename Container::iterator</defval>
-      </param>
-    </templateparamlist>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="class_ring_iterator_1aa56768696f64d6226c4c04c8631bca67" prot="public" static="no">
-        <type>std::ptrdiff_t</type>
-        <definition>using RingIterator&lt; T, Container, Iterator &gt;::difference_type =  std::ptrdiff_t</definition>
-        <argsstring></argsstring>
-        <name>difference_type</name>
-        <qualifiedname>RingIterator::difference_type</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="21" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="21" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_ring_iterator_1ac49a5e2521cbc023a3da64469b695381" prot="public" static="no">
-        <type>std::bidirectional_iterator_tag</type>
-        <definition>using RingIterator&lt; T, Container, Iterator &gt;::iterator_category =  std::bidirectional_iterator_tag</definition>
-        <argsstring></argsstring>
-        <name>iterator_category</name>
-        <qualifiedname>RingIterator::iterator_category</qualifiedname>
-        <briefdescription>
-<para>Add typedefs for std::iterator_traits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="19" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="19" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_ring_iterator_1ad378b21b5c3dcf41c9aaefd857d5327c" prot="public" static="no">
-        <type>T *</type>
-        <definition>using RingIterator&lt; T, Container, Iterator &gt;::pointer =  T*</definition>
-        <argsstring></argsstring>
-        <name>pointer</name>
-        <qualifiedname>RingIterator::pointer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="22" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_ring_iterator_1a4c8c168322f82bda3bef534515d2e15b" prot="public" static="no">
-        <type>T &amp;</type>
-        <definition>using RingIterator&lt; T, Container, Iterator &gt;::reference =  T&amp;</definition>
-        <argsstring></argsstring>
-        <name>reference</name>
-        <qualifiedname>RingIterator::reference</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="23" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_ring_iterator_1a93c857cfb2880488146cd6cb9a500813" prot="public" static="no">
-        <type>T</type>
-        <definition>using RingIterator&lt; T, Container, Iterator &gt;::value_type =  T</definition>
-        <argsstring></argsstring>
-        <name>value_type</name>
-        <qualifiedname>RingIterator::value_type</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="20" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_ring_iterator_1a2f5b3b9ab9c063edf48854870358035e" prot="private" static="no" mutable="no">
-        <type><ref refid="struct_iterator" kindref="compound">Iterator</ref></type>
-        <definition>Iterator RingIterator&lt; T, Container, Iterator &gt;::begin</definition>
-        <argsstring></argsstring>
-        <name>begin</name>
-        <qualifiedname>RingIterator::begin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="13" column="14" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="13" bodyend="-1"/>
-        <referencedby refid="class_ring_iterator_1a6f8f6f1863544e91fc6f9e99cbf0e5e1" compoundref="_circular_8_h" startline="69" endline="74">RingIterator&lt; T, Container, Iterator &gt;::operator++</referencedby>
-        <referencedby refid="class_ring_iterator_1ac42ba90c6e63d42524fd0486258ee68e" compoundref="_circular_8_h" startline="85" endline="90">RingIterator&lt; T, Container, Iterator &gt;::operator--</referencedby>
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-        <type><ref refid="struct_iterator" kindref="compound">Iterator</ref></type>
-        <definition>Iterator RingIterator&lt; T, Container, Iterator &gt;::cursor</definition>
-        <argsstring></argsstring>
-        <name>cursor</name>
-        <qualifiedname>RingIterator::cursor</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="12" column="14" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="12" bodyend="-1"/>
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-      </memberdef>
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-        <type>Container &amp;</type>
-        <definition>Container&amp; RingIterator&lt; T, Container, Iterator &gt;::data</definition>
-        <argsstring></argsstring>
-        <name>data</name>
-        <qualifiedname>RingIterator::data</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="10" column="13" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="10" bodyend="-1"/>
-        <referencedby refid="class_ring_iterator_1a86fb027f699663c7fc14759010fecfea" compoundref="_circular_8_h" startline="107" endline="110">RingIterator&lt; T, Container, Iterator &gt;::erase</referencedby>
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-        <type><ref refid="struct_iterator" kindref="compound">Iterator</ref></type>
-        <definition>Iterator RingIterator&lt; T, Container, Iterator &gt;::end</definition>
-        <argsstring></argsstring>
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-        <qualifiedname>RingIterator::end</qualifiedname>
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-        <argsstring>()</argsstring>
-        <name>erase</name>
-        <qualifiedname>RingIterator::erase</qualifiedname>
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-<para>Erase the current element. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="107" column="16" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="107" bodyend="110"/>
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-        <definition>RingIterator RingIterator&lt; T, Container, Iterator &gt;::insert</definition>
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-        <name>insert</name>
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-        <param>
-          <type>const T &amp;</type>
-          <declname>x</declname>
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-<para>Insert a new element at the current position. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/Circular.H" line="101" column="16" bodyfile="/home/weinberg/Projects/EXP/include/Circular.H" bodystart="101" bodyend="104"/>
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-<para>Test for inequality. </para>
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diff --git a/doxyxml/class_running_time.xml b/doxyxml/class_running_time.xml
deleted file mode 100644
index 8328de7..0000000
--- a/doxyxml/class_running_time.xml
+++ /dev/null
@@ -1,352 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_running_time" kind="class" language="C++" prot="public">
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-        <references refid="class_running_time_1a7b0471613579810bf32524816adb905f" compoundref="_running_time_8_h" startline="17">accum</references>
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-        <type>void</type>
-        <definition>void RunningTime::lap</definition>
-        <argsstring>()</argsstring>
-        <name>lap</name>
-        <qualifiedname>RunningTime::lap</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/RunningTime.H" line="42" column="8" bodyfile="/home/weinberg/Projects/EXP/include/RunningTime.H" bodystart="42" bodyend="46"/>
-        <references refid="class_running_time_1a7b0471613579810bf32524816adb905f" compoundref="_running_time_8_h" startline="17">accum</references>
-        <references refid="class_timer_1a490604efc23a4ff9bef8d1f9f418ecb2" compoundref="_timer_8_h" startline="75" endline="84">Timer::getTime</references>
-        <references refid="class_running_time_1a21693cc51fd4ac190f8f017c77fba525" compoundref="_running_time_8_h" startline="17">last</references>
-        <references refid="class_running_time_1a352c38b45a087db968d1c801f54475bb" compoundref="_running_time_8_h" startline="22">timer</references>
-        <referencedby refid="class_running_time_1a732dc3beb8518f5723c18c2f7ee1cc35" compoundref="_running_time_8_h" startline="67" endline="73">Stop</referencedby>
-      </memberdef>
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-        <type>double</type>
-        <definition>double RunningTime::getLast</definition>
-        <argsstring>()</argsstring>
-        <name>getLast</name>
-        <qualifiedname>RunningTime::getLast</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RunningTime.H" line="77" column="10" bodyfile="/home/weinberg/Projects/EXP/include/RunningTime.H" bodystart="77" bodyend="77"/>
-        <references refid="class_running_time_1a21693cc51fd4ac190f8f017c77fba525" compoundref="_running_time_8_h" startline="17">last</references>
-      </memberdef>
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-        <type>double</type>
-        <definition>double RunningTime::getTavg</definition>
-        <argsstring>()</argsstring>
-        <name>getTavg</name>
-        <qualifiedname>RunningTime::getTavg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RunningTime.H" line="75" column="10" bodyfile="/home/weinberg/Projects/EXP/include/RunningTime.H" bodystart="75" bodyend="75"/>
-        <references refid="class_running_time_1adca343f0d332bcd88ffd56b950ed0917" compoundref="_running_time_8_h" startline="17">current</references>
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-        <type>double</type>
-        <definition>double RunningTime::getTime</definition>
-        <argsstring>()</argsstring>
-        <name>getTime</name>
-        <qualifiedname>RunningTime::getTime</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/RunningTime.H" line="76" column="10" bodyfile="/home/weinberg/Projects/EXP/include/RunningTime.H" bodystart="76" bodyend="76"/>
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-        <type></type>
-        <definition>RunningTime::RunningTime</definition>
-        <argsstring>()</argsstring>
-        <name>RunningTime</name>
-        <qualifiedname>RunningTime::RunningTime</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RunningTime.H" line="59" column="3" bodyfile="/home/weinberg/Projects/EXP/include/RunningTime.H" bodystart="59" bodyend="59"/>
-        <references refid="class_running_time_1a8fbbe6f82f71ce2a927bab08dfbc10d5" compoundref="_running_time_8_h" startline="49" endline="55">initialize</references>
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-        <type></type>
-        <definition>RunningTime::RunningTime</definition>
-        <argsstring>(unsigned n)</argsstring>
-        <name>RunningTime</name>
-        <qualifiedname>RunningTime::RunningTime</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RunningTime.H" line="60" column="3" bodyfile="/home/weinberg/Projects/EXP/include/RunningTime.H" bodystart="60" bodyend="60"/>
-        <references refid="class_running_time_1a8fbbe6f82f71ce2a927bab08dfbc10d5" compoundref="_running_time_8_h" startline="49" endline="55">initialize</references>
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-        <type>void</type>
-        <definition>void RunningTime::Start</definition>
-        <argsstring>()</argsstring>
-        <name>Start</name>
-        <qualifiedname>RunningTime::Start</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/RunningTime.H" line="62" column="8" bodyfile="/home/weinberg/Projects/EXP/include/RunningTime.H" bodystart="62" bodyend="65"/>
-        <references refid="class_timer_1a3a8b5272198d029779dc9302a54305a8" compoundref="_timer_8_h" startline="45" endline="50">Timer::start</references>
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-        <type>void</type>
-        <definition>void RunningTime::Stop</definition>
-        <argsstring>(bool final=true)</argsstring>
-        <name>Stop</name>
-        <qualifiedname>RunningTime::Stop</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>final</declname>
-          <defval>true</defval>
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-        <references refid="class_running_time_1aed2021e81dfd9464cb34471edca03ef8" compoundref="_running_time_8_h" startline="42" endline="46">lap</references>
-        <references refid="class_timer_1a9020542d73357a4eef512eefaf57524b" compoundref="_timer_8_h" startline="67" endline="72">Timer::reset</references>
-        <references refid="class_timer_1a988f79aa183d9d5473c13106f5babe48" compoundref="_timer_8_h" startline="54" endline="63">Timer::stop</references>
-        <references refid="class_running_time_1a352c38b45a087db968d1c801f54475bb" compoundref="_running_time_8_h" startline="22">timer</references>
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-    </detaileddescription>
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-        <label>RunningTime</label>
-        <link refid="class_running_time"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>timer</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/RunningTime.H" line="10" column="1" bodyfile="/home/weinberg/Projects/EXP/include/RunningTime.H" bodystart="11" bodyend="78"/>
-    <listofallmembers>
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-      <member refid="class_running_time_1ad926a130c429caa4173c98b3da248bf4" prot="private" virt="non-virtual"><scope>RunningTime</scope><name>append</name></member>
-      <member refid="class_running_time_1ab4002e0e14edcde405bab776fc3907cd" prot="private" virt="non-virtual"><scope>RunningTime</scope><name>boxcar</name></member>
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-      <member refid="class_running_time_1a21693cc51fd4ac190f8f017c77fba525" prot="private" virt="non-virtual"><scope>RunningTime</scope><name>last</name></member>
-      <member refid="class_running_time_1a93ef2110fe6f477d74b02a6c55f63ac2" prot="private" virt="non-virtual"><scope>RunningTime</scope><name>nkeep</name></member>
-      <member refid="class_running_time_1adc98e9bc045319d6203e8a7743bfe84f" prot="public" virt="non-virtual"><scope>RunningTime</scope><name>RunningTime</name></member>
-      <member refid="class_running_time_1ac96297502565dbf57c2c18be51f86f57" prot="public" virt="non-virtual"><scope>RunningTime</scope><name>RunningTime</name></member>
-      <member refid="class_running_time_1a417626fc2c1c07dcc1465e55fcfcef16" prot="public" virt="non-virtual"><scope>RunningTime</scope><name>Start</name></member>
-      <member refid="class_running_time_1a732dc3beb8518f5723c18c2f7ee1cc35" prot="public" virt="non-virtual"><scope>RunningTime</scope><name>Stop</name></member>
-      <member refid="class_running_time_1a352c38b45a087db968d1c801f54475bb" prot="private" virt="non-virtual"><scope>RunningTime</scope><name>timer</name></member>
-      <member refid="class_running_time_1a1c5af29d924a06dc2d2e5903d60a0bb5" prot="private" virt="non-virtual"><scope>RunningTime</scope><name>value</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_s_l_grid_slab.xml b/doxyxml/class_s_l_grid_slab.xml
deleted file mode 100644
index 61fd88c..0000000
--- a/doxyxml/class_s_l_grid_slab.xml
+++ /dev/null
@@ -1,1149 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_s_l_grid_slab" kind="class" language="C++" prot="public">
-    <compoundname>SLGridSlab</compoundname>
-    <includes refid="_s_l_grid_m_p2_8_h" local="no">SLGridMP2.H</includes>
-    <innerclass refid="class_s_l_grid_slab_1_1_coord_map" prot="private">SLGridSlab::CoordMap</innerclass>
-    <innerclass refid="class_s_l_grid_slab_1_1_linear_map" prot="private">SLGridSlab::LinearMap</innerclass>
-    <innerclass refid="class_s_l_grid_slab_1_1_sech_map" prot="private">SLGridSlab::SechMap</innerclass>
-    <innerclass refid="class_s_l_grid_slab_1_1_tanh_map" prot="private">SLGridSlab::TanhMap</innerclass>
-    <sectiondef kind="private-type">
-      <memberdef kind="enum" id="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3" prot="private" static="no" strong="no">
-        <type></type>
-        <name>CoordMapTypes</name>
-        <qualifiedname>SLGridSlab::CoordMapTypes</qualifiedname>
-        <enumvalue id="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3a28b2a86d2fa2bb19260d6522d5cf45c1" prot="private">
-          <name>Tanh</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3a436d25903feb1fffdcd24470cbc321f8" prot="private">
-          <name>Sech</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3a888e6a6ba5a4141f687e45b5d4cebf09" prot="private">
-          <name>Linear</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>This defines a class providing selectable maps from the infinite to finite interval </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="304" column="3" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="304" bodyend="304"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_s_l_grid_slab_1ab2215c5afe2ff65f595055bfba83fdd4" prot="private" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_table_slab" kindref="compound">TableSlab</ref>[]&gt;</type>
-        <definition>using SLGridSlab::table_ptr_1D =  std::shared_ptr&lt;TableSlab[]&gt;</definition>
-        <argsstring></argsstring>
-        <name>table_ptr_1D</name>
-        <qualifiedname>SLGridSlab::table_ptr_1D</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="273" column="3" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="273" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_s_l_grid_slab_1af9fe85c0b6379ecc7e8d29027d9abf44" prot="private" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_s_l_grid_slab_1ab2215c5afe2ff65f595055bfba83fdd4" kindref="member">table_ptr_1D</ref>[]&gt;</type>
-        <definition>using SLGridSlab::table_ptr_2D =  std::shared_ptr&lt;table_ptr_1D[]&gt;</definition>
-        <argsstring></argsstring>
-        <name>table_ptr_2D</name>
-        <qualifiedname>SLGridSlab::table_ptr_2D</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="274" column="3" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="274" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_s_l_grid_slab_1a7051a8f5d3b33a606b0f89545a1515bd" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SLGridSlab::d0</definition>
-        <argsstring></argsstring>
-        <name>d0</name>
-        <qualifiedname>SLGridSlab::d0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="270" column="19" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="270" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_slab_1a721d878a968cdb9098765ebd0c407c50" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SLGridSlab::dxi</definition>
-        <argsstring></argsstring>
-        <name>dxi</name>
-        <qualifiedname>SLGridSlab::dxi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="265" column="20" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="265" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_slab_1a7f120b3cf92257406299e566fee0e917" prot="private" static="no" mutable="no">
-        <type>std::unique_ptr&lt; <ref refid="class_s_l_grid_slab_1_1_coord_map" kindref="compound">CoordMap</ref> &gt;</type>
-        <definition>std::unique_ptr&lt;CoordMap&gt; SLGridSlab::mM</definition>
-        <argsstring></argsstring>
-        <name>mM</name>
-        <qualifiedname>SLGridSlab::mM</qualifiedname>
-        <briefdescription>
-<para>The current map created by the <ref refid="class_s_l_grid_slab" kindref="compound">SLGridSlab</ref> constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="369" column="19" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="369" bodyend="-1"/>
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-        <referencedby refid="class_s_l_grid_slab_1a937f1bda842b754de3e31264b588cbac" compoundref="_s_l_grid_m_p2_8_h" startline="407" endline="407">z_to_xi</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_slab_1a052f43f3e37dfcf1442d63057f09580a" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; char[]&gt;</type>
-        <definition>std::shared_ptr&lt;char[]&gt; SLGridSlab::mpi_buf</definition>
-        <argsstring></argsstring>
-        <name>mpi_buf</name>
-        <qualifiedname>SLGridSlab::mpi_buf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <type>bool</type>
-        <definition>bool SLGridSlab::ReadH5Cache</definition>
-        <argsstring>(void)</argsstring>
-        <name>ReadH5Cache</name>
-        <qualifiedname>SLGridSlab::ReadH5Cache</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="287" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1a482af5c4664d3300b373d1bfdf7017a0" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SLGridSlab::WriteH5Cache</definition>
-        <argsstring>(void)</argsstring>
-        <name>WriteH5Cache</name>
-        <qualifiedname>SLGridSlab::WriteH5Cache</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="288" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_s_l_grid_slab_1ac9ca51c7f210c88ca3d50fe7a815864e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double SLGridSlab::d_xi_to_z</definition>
-        <argsstring>(double x)</argsstring>
-        <name>d_xi_to_z</name>
-        <qualifiedname>SLGridSlab::d_xi_to_z</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Jacobian of coordinate mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="413" column="10" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="413" bodyend="413"/>
-        <references refid="class_s_l_grid_slab_1a7f120b3cf92257406299e566fee0e917" compoundref="_s_l_grid_m_p2_8_h" startline="369">mM</references>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1acd9ce2706e9a2449ffe69197945f12e2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double SLGridSlab::eigenvalue</definition>
-        <argsstring>(int kx, int ky, int n)</argsstring>
-        <name>eigenvalue</name>
-        <qualifiedname>SLGridSlab::eigenvalue</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>kx</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ky</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Members. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Get n^th eigenvalue for given wave number indices </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="404" column="10" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="404" bodyend="404"/>
-        <references refid="class_s_l_grid_slab_1ae6f3704552e774905f09675c3a64dadf" compoundref="_s_l_grid_m_p2_8_h" startline="276">table</references>
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-        <type>double</type>
-        <definition>double SLGridSlab::get_dens</definition>
-        <argsstring>(double x, int kx, int ky, int n, int which=1)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>SLGridSlab::get_dens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>kx</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ky</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-<para>Get density for dimensionless coord with given wave numbers and index. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="419" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1ae543f10e58a1fff08906695200e53b1a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SLGridSlab::get_dens</definition>
-        <argsstring>(Eigen::MatrixXd &amp;tab, double x, int which=1)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>SLGridSlab::get_dens</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>tab</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get density for dimensionless coord with given wave numbers Return Matrix with first dimension containing x and y wavenumbers packed with y index varying most quicly, second index is vertical order. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="446" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1a8dda8abe537999c8bff271e7afb255ae" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SLGridSlab::get_dens</definition>
-        <argsstring>(Eigen::VectorXd &amp;vec, double x, int kx, int ky, int which=1)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>SLGridSlab::get_dens</qualifiedname>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>vec</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>kx</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ky</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get density for dimensionless coord with given wave numbers Return Vector for all indices </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="431" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1aef28a5e5a126e4d39c40063ed75b8f4c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double SLGridSlab::get_force</definition>
-        <argsstring>(double x, int kx, int ky, int n, int which=1)</argsstring>
-        <name>get_force</name>
-        <qualifiedname>SLGridSlab::get_force</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>kx</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ky</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-<para>Get force for dimensionless coord with given wave numbers and index. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="422" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1a05989512bdacd27d6025db172b8a57d6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SLGridSlab::get_force</definition>
-        <argsstring>(Eigen::MatrixXd &amp;tab, double x, int which=1)</argsstring>
-        <name>get_force</name>
-        <qualifiedname>SLGridSlab::get_force</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>tab</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get force for dimensionless coord with given wave numbers Return Matrix with first dimension containing x and y wavenumbers packed with y index varying most quicly, second index is vertical order. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="451" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1ab71e9c5b9a755a0b5f03ce92f0678a81" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SLGridSlab::get_force</definition>
-        <argsstring>(Eigen::VectorXd &amp;vec, double x, int kx, int ky, int which=1)</argsstring>
-        <name>get_force</name>
-        <qualifiedname>SLGridSlab::get_force</qualifiedname>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>vec</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>kx</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ky</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get force for dimensionless coord with given wave numbers Return Vector for all indices </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="435" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1a92d655d4c68ea145815a3aa9a3b13768" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double SLGridSlab::get_pot</definition>
-        <argsstring>(double x, int kx, int ky, int n, int which=1)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SLGridSlab::get_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>kx</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ky</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-<para>Get potential for dimensionless coord with given wave numbers and index. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="416" column="10"/>
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-      <memberdef kind="function" id="class_s_l_grid_slab_1a62e203e934e311f078a30ed31e4cbd02" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SLGridSlab::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;tab, double x, int which=1)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SLGridSlab::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>tab</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get potential for dimensionless coord with given wave numbers Return Matrix with first dimension containing x and y wavenumbers packed with y index varying most quicly, second index is vertical order. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="441" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1a6f44042c8f9373175855d448fa68c902" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SLGridSlab::get_pot</definition>
-        <argsstring>(Eigen::VectorXd &amp;vec, double x, int kx, int ky, int which=1)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SLGridSlab::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>vec</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>kx</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ky</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get potential for member for dimensionless coord with given wave numbers Return Vector for all indices </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="427" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1aae582c113d6266751ada0612e2658a4c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt; Eigen::MatrixXd &gt; SLGridSlab::orthoCheck</definition>
-        <argsstring>(int knots=40)</argsstring>
-        <name>orthoCheck</name>
-        <qualifiedname>SLGridSlab::orthoCheck</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>knots</declname>
-          <defval>40</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Compute the orthogonality of the basis by returning inner produce matrices </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="455" column="15"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1a99c51a8549a6a1b203d5b8f179cf221c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>SLGridSlab::SLGridSlab</definition>
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-        <name>SLGridSlab</name>
-        <qualifiedname>SLGridSlab::SLGridSlab</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>kmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numz</declname>
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-        <param>
-          <type>double</type>
-          <declname>zmax</declname>
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-        <param>
-          <type>const std::string</type>
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-          <defval>&quot;isothermal&quot;</defval>
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-        <param>
-          <type>bool</type>
-          <declname>Verbose</declname>
-          <defval>false</defval>
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-        <briefdescription>
-<para>Constructor. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="393" column="3"/>
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-        <type>double</type>
-        <definition>double SLGridSlab::xi_to_z</definition>
-        <argsstring>(double x)</argsstring>
-        <name>xi_to_z</name>
-        <qualifiedname>SLGridSlab::xi_to_z</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Map from dimensionless coordinate to vertical coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double SLGridSlab::z_to_xi</definition>
-        <argsstring>(double z)</argsstring>
-        <name>z_to_xi</name>
-        <qualifiedname>SLGridSlab::z_to_xi</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Map from vertical coordinate to dimensionless coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_s_l_grid_slab_1a7f120b3cf92257406299e566fee0e917" compoundref="_s_l_grid_m_p2_8_h" startline="369">mM</references>
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-        <definition>SLGridSlab::~SLGridSlab</definition>
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-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-    <briefdescription>
-<para>Slab (one-dimensional) SL grid class. </para>
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-    <detaileddescription>
-    </detaileddescription>
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-    <listofallmembers>
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diff --git a/doxyxml/class_s_l_grid_slab_1_1_coord_map.xml b/doxyxml/class_s_l_grid_slab_1_1_coord_map.xml
deleted file mode 100644
index 56ba715..0000000
--- a/doxyxml/class_s_l_grid_slab_1_1_coord_map.xml
+++ /dev/null
@@ -1,192 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_s_l_grid_slab_1_1_coord_map" kind="class" language="C++" prot="private" abstract="yes">
-    <compoundname>SLGridSlab::CoordMap</compoundname>
-    <derivedcompoundref refid="class_s_l_grid_slab_1_1_linear_map" prot="public" virt="non-virtual">SLGridSlab::LinearMap</derivedcompoundref>
-    <derivedcompoundref refid="class_s_l_grid_slab_1_1_sech_map" prot="public" virt="non-virtual">SLGridSlab::SechMap</derivedcompoundref>
-    <derivedcompoundref refid="class_s_l_grid_slab_1_1_tanh_map" prot="public" virt="non-virtual">SLGridSlab::TanhMap</derivedcompoundref>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SLGridSlab::CoordMap::H</definition>
-        <argsstring></argsstring>
-        <name>H</name>
-        <qualifiedname>SLGridSlab::CoordMap::H</qualifiedname>
-        <briefdescription>
-<para>Scale parameter. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <definition>SLGridSlab::CoordMap::CoordMap</definition>
-        <argsstring>(double H)</argsstring>
-        <name>CoordMap</name>
-        <qualifiedname>SLGridSlab::CoordMap::CoordMap</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>H</declname>
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-<para>Constructor. </para>
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-        <type>double</type>
-        <definition>virtual double SLGridSlab::CoordMap::d_xi_to_z</definition>
-        <argsstring>(double z)=0</argsstring>
-        <name>d_xi_to_z</name>
-        <qualifiedname>SLGridSlab::CoordMap::d_xi_to_z</qualifiedname>
-        <reimplementedby refid="class_s_l_grid_slab_1_1_tanh_map_1aacf536df13b2443871e40c9d2a89a304">d_xi_to_z</reimplementedby>
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-        <param>
-          <type>double</type>
-          <declname>z</declname>
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-        <briefdescription>
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-        <definition>static std::unique_ptr&lt; CoordMap &gt; SLGridSlab::CoordMap::factory</definition>
-        <argsstring>(CoordMapTypes type, double H)</argsstring>
-        <name>factory</name>
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-        <param>
-          <type><ref refid="class_s_l_grid_slab_1a9d273e2a64cf2a07a0b930a95088f3a3" kindref="member">CoordMapTypes</ref></type>
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-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="330" column="28"/>
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-<para>The base class for all coordinate maps. </para>
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-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a4b74c95d6748b73f6f18f76f28f58c5f" prot="public" virt="non-virtual"><scope>SLGridSlab::CoordMap</scope><name>factory</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" prot="protected" virt="non-virtual"><scope>SLGridSlab::CoordMap</scope><name>H</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1aad4b4aa9d11c2007616a12138797805c" prot="public" virt="pure-virtual"><scope>SLGridSlab::CoordMap</scope><name>xi_to_z</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a1e32fa3531c060d8b1940e57a00c3fda" prot="public" virt="pure-virtual"><scope>SLGridSlab::CoordMap</scope><name>z_to_xi</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a1721fdceac0350451110fe6083a01d20" prot="public" virt="virtual"><scope>SLGridSlab::CoordMap</scope><name>~CoordMap</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_s_l_grid_slab_1_1_linear_map.xml b/doxyxml/class_s_l_grid_slab_1_1_linear_map.xml
deleted file mode 100644
index 325b0f2..0000000
--- a/doxyxml/class_s_l_grid_slab_1_1_linear_map.xml
+++ /dev/null
@@ -1,127 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_s_l_grid_slab_1_1_linear_map" kind="class" language="C++" prot="private">
-    <compoundname>SLGridSlab::LinearMap</compoundname>
-    <basecompoundref refid="class_s_l_grid_slab_1_1_coord_map" prot="public" virt="non-virtual">SLGridSlab::CoordMap</basecompoundref>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_linear_map_1aca3585409228dd04e0568d6f1658dc8d" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::LinearMap::d_xi_to_z</definition>
-        <argsstring>(double z)</argsstring>
-        <name>d_xi_to_z</name>
-        <qualifiedname>SLGridSlab::LinearMap::d_xi_to_z</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1a455b7aef1988fe5d769ce5e17b2874e8">d_xi_to_z</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Jacobian of the transformation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="362" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_linear_map_1a8b481e555d5ee584bf4641b234e2ae50" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>SLGridSlab::LinearMap::LinearMap</definition>
-        <argsstring>(double H)</argsstring>
-        <name>LinearMap</name>
-        <qualifiedname>SLGridSlab::LinearMap::LinearMap</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>H</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="359" column="5" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="359" bodyend="359"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_linear_map_1a56cabd4b1f622fe1771fc4764af005e3" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::LinearMap::xi_to_z</definition>
-        <argsstring>(double z)</argsstring>
-        <name>xi_to_z</name>
-        <qualifiedname>SLGridSlab::LinearMap::xi_to_z</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1aad4b4aa9d11c2007616a12138797805c">xi_to_z</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Convert from mapped coordinate back to vertical. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="361" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_linear_map_1a6984158bb10b3ee56eb60797b73ae7d6" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::LinearMap::z_to_xi</definition>
-        <argsstring>(double z)</argsstring>
-        <name>z_to_xi</name>
-        <qualifiedname>SLGridSlab::LinearMap::z_to_xi</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1a1e32fa3531c060d8b1940e57a00c3fda">z_to_xi</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Convert from vertical to mapped coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="360" column="20"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>x = z </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>SLGridSlab::CoordMap</label>
-        <link refid="class_s_l_grid_slab_1_1_coord_map"/>
-      </node>
-      <node id="1">
-        <label>SLGridSlab::LinearMap</label>
-        <link refid="class_s_l_grid_slab_1_1_linear_map"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>SLGridSlab::CoordMap</label>
-        <link refid="class_s_l_grid_slab_1_1_coord_map"/>
-      </node>
-      <node id="1">
-        <label>SLGridSlab::LinearMap</label>
-        <link refid="class_s_l_grid_slab_1_1_linear_map"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="356" column="3" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="357" bodyend="363"/>
-    <listofallmembers>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1aa5bf84ec8451a510fe23993ef4f4d3cc" prot="public" virt="non-virtual"><scope>SLGridSlab::LinearMap</scope><name>CoordMap</name></member>
-      <member refid="class_s_l_grid_slab_1_1_linear_map_1aca3585409228dd04e0568d6f1658dc8d" prot="public" virt="virtual"><scope>SLGridSlab::LinearMap</scope><name>d_xi_to_z</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a4b74c95d6748b73f6f18f76f28f58c5f" prot="public" virt="non-virtual"><scope>SLGridSlab::LinearMap</scope><name>factory</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" prot="protected" virt="non-virtual"><scope>SLGridSlab::LinearMap</scope><name>H</name></member>
-      <member refid="class_s_l_grid_slab_1_1_linear_map_1a8b481e555d5ee584bf4641b234e2ae50" prot="public" virt="non-virtual"><scope>SLGridSlab::LinearMap</scope><name>LinearMap</name></member>
-      <member refid="class_s_l_grid_slab_1_1_linear_map_1a56cabd4b1f622fe1771fc4764af005e3" prot="public" virt="virtual"><scope>SLGridSlab::LinearMap</scope><name>xi_to_z</name></member>
-      <member refid="class_s_l_grid_slab_1_1_linear_map_1a6984158bb10b3ee56eb60797b73ae7d6" prot="public" virt="virtual"><scope>SLGridSlab::LinearMap</scope><name>z_to_xi</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a1721fdceac0350451110fe6083a01d20" prot="public" virt="virtual"><scope>SLGridSlab::LinearMap</scope><name>~CoordMap</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_s_l_grid_slab_1_1_sech_map.xml b/doxyxml/class_s_l_grid_slab_1_1_sech_map.xml
deleted file mode 100644
index c45d844..0000000
--- a/doxyxml/class_s_l_grid_slab_1_1_sech_map.xml
+++ /dev/null
@@ -1,127 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_s_l_grid_slab_1_1_sech_map" kind="class" language="C++" prot="private">
-    <compoundname>SLGridSlab::SechMap</compoundname>
-    <basecompoundref refid="class_s_l_grid_slab_1_1_coord_map" prot="public" virt="non-virtual">SLGridSlab::CoordMap</basecompoundref>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_sech_map_1aef4157e125111c391081d8d474362867" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::SechMap::d_xi_to_z</definition>
-        <argsstring>(double z)</argsstring>
-        <name>d_xi_to_z</name>
-        <qualifiedname>SLGridSlab::SechMap::d_xi_to_z</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1a455b7aef1988fe5d769ce5e17b2874e8">d_xi_to_z</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Jacobian of the transformation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="352" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_sech_map_1ac53782f030f14535e3b00a8c1b680df8" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>SLGridSlab::SechMap::SechMap</definition>
-        <argsstring>(double H)</argsstring>
-        <name>SechMap</name>
-        <qualifiedname>SLGridSlab::SechMap::SechMap</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>H</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="349" column="5" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="349" bodyend="349"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_sech_map_1a77cc9f55ade022a7c3796dde30ae6641" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::SechMap::xi_to_z</definition>
-        <argsstring>(double z)</argsstring>
-        <name>xi_to_z</name>
-        <qualifiedname>SLGridSlab::SechMap::xi_to_z</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1aad4b4aa9d11c2007616a12138797805c">xi_to_z</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Convert from mapped coordinate back to vertical. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="351" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_sech_map_1a2db5175dfdf7207d5b2efe61eaff22cf" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::SechMap::z_to_xi</definition>
-        <argsstring>(double z)</argsstring>
-        <name>z_to_xi</name>
-        <qualifiedname>SLGridSlab::SechMap::z_to_xi</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1a1e32fa3531c060d8b1940e57a00c3fda">z_to_xi</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Convert from vertical to mapped coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="350" column="20"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>x = z/sqrt(z^2 + H^2) </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>SLGridSlab::CoordMap</label>
-        <link refid="class_s_l_grid_slab_1_1_coord_map"/>
-      </node>
-      <node id="1">
-        <label>SLGridSlab::SechMap</label>
-        <link refid="class_s_l_grid_slab_1_1_sech_map"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>SLGridSlab::CoordMap</label>
-        <link refid="class_s_l_grid_slab_1_1_coord_map"/>
-      </node>
-      <node id="1">
-        <label>SLGridSlab::SechMap</label>
-        <link refid="class_s_l_grid_slab_1_1_sech_map"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="346" column="3" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="347" bodyend="353"/>
-    <listofallmembers>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1aa5bf84ec8451a510fe23993ef4f4d3cc" prot="public" virt="non-virtual"><scope>SLGridSlab::SechMap</scope><name>CoordMap</name></member>
-      <member refid="class_s_l_grid_slab_1_1_sech_map_1aef4157e125111c391081d8d474362867" prot="public" virt="virtual"><scope>SLGridSlab::SechMap</scope><name>d_xi_to_z</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a4b74c95d6748b73f6f18f76f28f58c5f" prot="public" virt="non-virtual"><scope>SLGridSlab::SechMap</scope><name>factory</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" prot="protected" virt="non-virtual"><scope>SLGridSlab::SechMap</scope><name>H</name></member>
-      <member refid="class_s_l_grid_slab_1_1_sech_map_1ac53782f030f14535e3b00a8c1b680df8" prot="public" virt="non-virtual"><scope>SLGridSlab::SechMap</scope><name>SechMap</name></member>
-      <member refid="class_s_l_grid_slab_1_1_sech_map_1a77cc9f55ade022a7c3796dde30ae6641" prot="public" virt="virtual"><scope>SLGridSlab::SechMap</scope><name>xi_to_z</name></member>
-      <member refid="class_s_l_grid_slab_1_1_sech_map_1a2db5175dfdf7207d5b2efe61eaff22cf" prot="public" virt="virtual"><scope>SLGridSlab::SechMap</scope><name>z_to_xi</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a1721fdceac0350451110fe6083a01d20" prot="public" virt="virtual"><scope>SLGridSlab::SechMap</scope><name>~CoordMap</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_s_l_grid_slab_1_1_tanh_map.xml b/doxyxml/class_s_l_grid_slab_1_1_tanh_map.xml
deleted file mode 100644
index 739967b..0000000
--- a/doxyxml/class_s_l_grid_slab_1_1_tanh_map.xml
+++ /dev/null
@@ -1,127 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_s_l_grid_slab_1_1_tanh_map" kind="class" language="C++" prot="private">
-    <compoundname>SLGridSlab::TanhMap</compoundname>
-    <basecompoundref refid="class_s_l_grid_slab_1_1_coord_map" prot="public" virt="non-virtual">SLGridSlab::CoordMap</basecompoundref>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_tanh_map_1aacf536df13b2443871e40c9d2a89a304" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::TanhMap::d_xi_to_z</definition>
-        <argsstring>(double z)</argsstring>
-        <name>d_xi_to_z</name>
-        <qualifiedname>SLGridSlab::TanhMap::d_xi_to_z</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1a455b7aef1988fe5d769ce5e17b2874e8">d_xi_to_z</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Jacobian of the transformation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="342" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_tanh_map_1a709119ecbc78a4a550838dd2610e86ff" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>SLGridSlab::TanhMap::TanhMap</definition>
-        <argsstring>(double H)</argsstring>
-        <name>TanhMap</name>
-        <qualifiedname>SLGridSlab::TanhMap::TanhMap</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>H</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="339" column="5" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="339" bodyend="339"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_tanh_map_1a8537819ce0983fa7e9fcb84084d082de" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::TanhMap::xi_to_z</definition>
-        <argsstring>(double z)</argsstring>
-        <name>xi_to_z</name>
-        <qualifiedname>SLGridSlab::TanhMap::xi_to_z</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1aad4b4aa9d11c2007616a12138797805c">xi_to_z</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Convert from mapped coordinate back to vertical. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="341" column="20"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_l_grid_slab_1_1_tanh_map_1ae4a5220ba00756f5278a077f80833df2" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SLGridSlab::TanhMap::z_to_xi</definition>
-        <argsstring>(double z)</argsstring>
-        <name>z_to_xi</name>
-        <qualifiedname>SLGridSlab::TanhMap::z_to_xi</qualifiedname>
-        <reimplements refid="class_s_l_grid_slab_1_1_coord_map_1a1e32fa3531c060d8b1940e57a00c3fda">z_to_xi</reimplements>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Convert from vertical to mapped coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="340" column="20"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>x = tanh(z/H) </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>SLGridSlab::CoordMap</label>
-        <link refid="class_s_l_grid_slab_1_1_coord_map"/>
-      </node>
-      <node id="1">
-        <label>SLGridSlab::TanhMap</label>
-        <link refid="class_s_l_grid_slab_1_1_tanh_map"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>SLGridSlab::CoordMap</label>
-        <link refid="class_s_l_grid_slab_1_1_coord_map"/>
-      </node>
-      <node id="1">
-        <label>SLGridSlab::TanhMap</label>
-        <link refid="class_s_l_grid_slab_1_1_tanh_map"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="336" column="3" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="337" bodyend="343"/>
-    <listofallmembers>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1aa5bf84ec8451a510fe23993ef4f4d3cc" prot="public" virt="non-virtual"><scope>SLGridSlab::TanhMap</scope><name>CoordMap</name></member>
-      <member refid="class_s_l_grid_slab_1_1_tanh_map_1aacf536df13b2443871e40c9d2a89a304" prot="public" virt="virtual"><scope>SLGridSlab::TanhMap</scope><name>d_xi_to_z</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a4b74c95d6748b73f6f18f76f28f58c5f" prot="public" virt="non-virtual"><scope>SLGridSlab::TanhMap</scope><name>factory</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a2bbbacd83cdc01d8dbc46faa51721ee4" prot="protected" virt="non-virtual"><scope>SLGridSlab::TanhMap</scope><name>H</name></member>
-      <member refid="class_s_l_grid_slab_1_1_tanh_map_1a709119ecbc78a4a550838dd2610e86ff" prot="public" virt="non-virtual"><scope>SLGridSlab::TanhMap</scope><name>TanhMap</name></member>
-      <member refid="class_s_l_grid_slab_1_1_tanh_map_1a8537819ce0983fa7e9fcb84084d082de" prot="public" virt="virtual"><scope>SLGridSlab::TanhMap</scope><name>xi_to_z</name></member>
-      <member refid="class_s_l_grid_slab_1_1_tanh_map_1ae4a5220ba00756f5278a077f80833df2" prot="public" virt="virtual"><scope>SLGridSlab::TanhMap</scope><name>z_to_xi</name></member>
-      <member refid="class_s_l_grid_slab_1_1_coord_map_1a1721fdceac0350451110fe6083a01d20" prot="public" virt="virtual"><scope>SLGridSlab::TanhMap</scope><name>~CoordMap</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_s_l_grid_sph.xml b/doxyxml/class_s_l_grid_sph.xml
deleted file mode 100644
index af4f908..0000000
--- a/doxyxml/class_s_l_grid_sph.xml
+++ /dev/null
@@ -1,1383 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_s_l_grid_sph" kind="class" language="C++" prot="public">
-    <compoundname>SLGridSph</compoundname>
-    <includes refid="_s_l_grid_m_p2_8_h" local="no">SLGridMP2.H</includes>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_s_l_grid_sph_1a2cd7f22c9725b46cc111468c8cc0e54b" prot="private" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_table_sph" kindref="compound">TableSph</ref>[]&gt;</type>
-        <definition>using SLGridSph::table_ptr_1D =  std::shared_ptr&lt;TableSph[]&gt;</definition>
-        <argsstring></argsstring>
-        <name>table_ptr_1D</name>
-        <qualifiedname>SLGridSph::table_ptr_1D</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="47" column="3" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="47" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_s_l_grid_sph_1ad8ae914daf3e01a12f79a8c0e65d71df" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SLGridSph::cache</definition>
-        <argsstring></argsstring>
-        <name>cache</name>
-        <qualifiedname>SLGridSph::cache</qualifiedname>
-        <briefdescription>
-<para>Use basis cache. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="71" column="8" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="71" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a3648c40afe4fa6c3771327496f7e7378" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SLGridSph::cmap</definition>
-        <argsstring></argsstring>
-        <name>cmap</name>
-        <qualifiedname>SLGridSph::cmap</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="36" column="7" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a6b1dfc6e83f3f9181275a91013b6d2c2" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SLGridSph::d0</definition>
-        <argsstring></argsstring>
-        <name>d0</name>
-        <qualifiedname>SLGridSph::d0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="44" column="19" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1ae699f8de2cd4982887712cc8797b2f56" prot="private" static="no" mutable="no">
-        <type>const std::string</type>
-        <definition>const std::string SLGridSph::default_cache</definition>
-        <argsstring></argsstring>
-        <name>default_cache</name>
-        <qualifiedname>SLGridSph::default_cache</qualifiedname>
-        <initializer>= &quot;.slgrid_sph_cache&quot;</initializer>
-        <briefdescription>
-<para>Default cache file name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="80" column="21" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="80" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a54572f3f82e4145cadb176a4da4dc1cd" prot="private" static="no" mutable="no">
-        <type>const std::string</type>
-        <definition>const std::string SLGridSph::default_model</definition>
-        <argsstring></argsstring>
-        <name>default_model</name>
-        <qualifiedname>SLGridSph::default_model</qualifiedname>
-        <initializer>= &quot;SLGridSph.model&quot;</initializer>
-        <briefdescription>
-<para>Default model file name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="77" column="21" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="77" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a187de697240f6e2ebf0c5fe89eda6deb" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SLGridSph::dfac</definition>
-        <argsstring></argsstring>
-        <name>dfac</name>
-        <qualifiedname>SLGridSph::dfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="37" column="15" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1acd74b97ab84a983a9a32b9fc87aea8e7" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SLGridSph::diverge</definition>
-        <argsstring></argsstring>
-        <name>diverge</name>
-        <qualifiedname>SLGridSph::diverge</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="36" column="12" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a9d95ca862e68606aa3ae5dbc11a15511" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SLGridSph::dxi</definition>
-        <argsstring></argsstring>
-        <name>dxi</name>
-        <qualifiedname>SLGridSph::dxi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="39" column="20" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a98f33cee4a3a93be7209e4b26f16b0d3" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SLGridSph::lmax</definition>
-        <argsstring></argsstring>
-        <name>lmax</name>
-        <qualifiedname>SLGridSph::lmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="33" column="7" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="33" bodyend="-1"/>
-        <referencedby refid="class_s_l_grid_sph_1a76d7cc921a09b190519bf76cad5b1798" compoundref="_s_l_grid_m_p2_8_h" startline="225" endline="225">getLmax</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a7936821e8dd19b7806d574a74ce3fdcc" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string SLGridSph::model_file_name</definition>
-        <argsstring></argsstring>
-        <name>model_file_name</name>
-        <qualifiedname>SLGridSph::model_file_name</qualifiedname>
-        <briefdescription>
-<para>Model file name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="83" column="15" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="83" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a02f9febe228b8ab460b308aa8c5f3b33" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; char[]&gt;</type>
-        <definition>std::shared_ptr&lt;char []&gt; SLGridSph::mpi_buf</definition>
-        <argsstring></argsstring>
-        <name>mpi_buf</name>
-        <qualifiedname>SLGridSph::mpi_buf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="66" column="19" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="66" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a1d02e85ec936ec5bfb3a53aee3fbbf8e" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SLGridSph::mpi_bufsz</definition>
-        <argsstring></argsstring>
-        <name>mpi_bufsz</name>
-        <qualifiedname>SLGridSph::mpi_bufsz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="65" column="7" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="65" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a91105146d8a0da9dd88ca1ef3cbfbba4" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SLGridSph::mpi_myid</definition>
-        <argsstring></argsstring>
-        <name>mpi_myid</name>
-        <qualifiedname>SLGridSph::mpi_myid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="64" column="7" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="64" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a2ce45d787ce5d7d38b45b758ff1d2ac8" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SLGridSph::mpi_numprocs</definition>
-        <argsstring></argsstring>
-        <name>mpi_numprocs</name>
-        <qualifiedname>SLGridSph::mpi_numprocs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="64" column="16" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="64" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a821c02701e9a8e31b47af2d3eccf27b8" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SLGridSph::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>SLGridSph::nmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="33" column="12" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="33" bodyend="-1"/>
-        <referencedby refid="class_s_l_grid_sph_1a510786e220835eb653d7c2c6a531feb5" compoundref="_s_l_grid_m_p2_8_h" startline="226" endline="226">getNmax</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a360e31f364063db2236bb554a7b49939" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SLGridSph::numr</definition>
-        <argsstring></argsstring>
-        <name>numr</name>
-        <qualifiedname>SLGridSph::numr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="33" column="17" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a2ac57c8cff2acf0552982fd814489b96" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SLGridSph::p0</definition>
-        <argsstring></argsstring>
-        <name>p0</name>
-        <qualifiedname>SLGridSph::p0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="43" column="19" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="43" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1ae84ca6d8e6621023939681b7dad5e769" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SLGridSph::r</definition>
-        <argsstring></argsstring>
-        <name>r</name>
-        <qualifiedname>SLGridSph::r</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="41" column="19" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a139f50426e685e271c7fac4dc2e6165a" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SLGridSph::rmap</definition>
-        <argsstring></argsstring>
-        <name>rmap</name>
-        <qualifiedname>SLGridSph::rmap</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="37" column="10" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a04985be5f03154610e1936eb535a0ec4" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SLGridSph::rmax</definition>
-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>SLGridSph::rmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="34" column="15" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="34" bodyend="-1"/>
-        <referencedby refid="class_s_l_grid_sph_1afe90870e2518f304449f805815c86432" compoundref="_s_l_grid_m_p2_8_h" startline="220" endline="220">getRmax</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1aae736cf4583b1f351dccf33cfb2760c8" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SLGridSph::rmin</definition>
-        <argsstring></argsstring>
-        <name>rmin</name>
-        <qualifiedname>SLGridSph::rmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="34" column="10" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="34" bodyend="-1"/>
-        <referencedby refid="class_s_l_grid_sph_1a8e6d4ecf525a519593b74105fb6e6e09" compoundref="_s_l_grid_m_p2_8_h" startline="219" endline="219">getRmin</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_s_l_grid_sph_1a9989c0fc0f39b8834319582435aacb5a" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string SLGridSph::sph_cache_name</definition>
-        <argsstring></argsstring>
-        <name>sph_cache_name</name>
-        <qualifiedname>SLGridSph::sph_cache_name</qualifiedname>
-        <briefdescription>
-<para>Cache file name. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="86" column="15" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="86" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_s_l_grid_sph_1af9ef477ea505753f1186beb8985c92fc" prot="private" static="no" mutable="no">
-        <type><ref refid="class_s_l_grid_sph_1a2cd7f22c9725b46cc111468c8cc0e54b" kindref="member">table_ptr_1D</ref></type>
-        <definition>table_ptr_1D SLGridSph::table</definition>
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-        <name>table</name>
-        <qualifiedname>SLGridSph::table</qualifiedname>
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-        <definition>bool SLGridSph::tbdbg</definition>
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-        <name>tbdbg</name>
-        <qualifiedname>SLGridSph::tbdbg</qualifiedname>
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-<para>For deep debugging. </para>
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-        </inbodydescription>
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-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SLGridSph::xi</definition>
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-        <name>xi</name>
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-        <definition>double SLGridSph::xmax</definition>
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-        </inbodydescription>
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-        <definition>double SLGridSph::xmin</definition>
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-        <name>xmin</name>
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-        <definition>const std::string SLGridSph::Version</definition>
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-<para>Cache versioning. </para>
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-          <type>int</type>
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-        <name>initialize</name>
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-<para>Read HDF5 cache. </para>
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-<para>Jacobian of nondimensional coordinate mapping. </para>
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-<para>Eigenvalue for index and harmonic order l. </para>
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-<para>Get density for dimensionless coord with harmonic order l and radial orer n <linebreak/>
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-<para>Get density for dimensionless coord with harmonic order l and radial order n Return Matrix with first dim harmonic order and second dim radial order </para>
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-<para>Get force for dimensionless coord with harmonic order l and radial orer n. </para>
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-<para>Get force for dimensionless coord with harmonic order l and radial order n Return Matrix with first dim harmonic order and second dim radial order </para>
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-        <type>void</type>
-        <definition>void SLGridSph::get_force</definition>
-        <argsstring>(Eigen::VectorXd &amp;vec, double x, int l, int which=1)</argsstring>
-        <name>get_force</name>
-        <qualifiedname>SLGridSph::get_force</qualifiedname>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>vec</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
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-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get force for dimensionless coord with harmonic order l and radial orer n Return all radial order values in Vector </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="200" column="8"/>
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-        <type>double</type>
-        <definition>double SLGridSph::get_pot</definition>
-        <argsstring>(double x, int l, int n, int which=1)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SLGridSph::get_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
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-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-<para>Get potential for dimensionless coord with harmonic order l and radial orer n. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="145" column="10"/>
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-        <type>void</type>
-        <definition>void SLGridSph::get_pot</definition>
-        <argsstring>(Eigen::MatrixXd &amp;tab, double x, int which=1)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SLGridSph::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>tab</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get potential for dimensionless coord with harmonic order l and radial order n Return Matrix with first dim harmonic order and second dim radial order </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="205" column="8"/>
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-      <memberdef kind="function" id="class_s_l_grid_sph_1a3c349d263e7fc0a82e11fcdebd5bf727" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SLGridSph::get_pot</definition>
-        <argsstring>(Eigen::VectorXd &amp;vec, double x, int l, int which=1)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SLGridSph::get_pot</qualifiedname>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>vec</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>which</declname>
-          <defval>1</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get potential for dimensionless coord with harmonic order l and radial orer n Return all radial order values in Vector </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="156" column="8"/>
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-        <type>int</type>
-        <definition>int SLGridSph::getLmax</definition>
-        <argsstring>()</argsstring>
-        <name>getLmax</name>
-        <qualifiedname>SLGridSph::getLmax</qualifiedname>
-        <briefdescription>
-<para>Get expansion limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="225" column="7" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="225" bodyend="225"/>
-        <references refid="class_s_l_grid_sph_1a98f33cee4a3a93be7209e4b26f16b0d3" compoundref="_s_l_grid_m_p2_8_h" startline="33">lmax</references>
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-        <type>int</type>
-        <definition>int SLGridSph::getNmax</definition>
-        <argsstring>()</argsstring>
-        <name>getNmax</name>
-        <qualifiedname>SLGridSph::getNmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="226" column="7" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="226" bodyend="226"/>
-        <references refid="class_s_l_grid_sph_1a821c02701e9a8e31b47af2d3eccf27b8" compoundref="_s_l_grid_m_p2_8_h" startline="33">nmax</references>
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-        <type>double</type>
-        <definition>double SLGridSph::getRmax</definition>
-        <argsstring>()</argsstring>
-        <name>getRmax</name>
-        <qualifiedname>SLGridSph::getRmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="220" column="10" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="220" bodyend="220"/>
-        <references refid="class_s_l_grid_sph_1a04985be5f03154610e1936eb535a0ec4" compoundref="_s_l_grid_m_p2_8_h" startline="34">rmax</references>
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-        <type>double</type>
-        <definition>double SLGridSph::getRmin</definition>
-        <argsstring>()</argsstring>
-        <name>getRmin</name>
-        <qualifiedname>SLGridSph::getRmin</qualifiedname>
-        <briefdescription>
-<para>Get the current minimum and maximum radii for the expansion. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="219" column="10" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="219" bodyend="219"/>
-        <references refid="class_s_l_grid_sph_1aae736cf4583b1f351dccf33cfb2760c8" compoundref="_s_l_grid_m_p2_8_h" startline="34">rmin</references>
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-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt; Eigen::MatrixXd &gt; SLGridSph::orthoCheck</definition>
-        <argsstring>(int knots=40)</argsstring>
-        <name>orthoCheck</name>
-        <qualifiedname>SLGridSph::orthoCheck</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>knots</declname>
-          <defval>40</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Compute the orthogonality of the basis by returning inner produce matrices </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="168" column="15"/>
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-      <memberdef kind="function" id="class_s_l_grid_sph_1abd551a1660dd7f05b08729c2f177c9a5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double SLGridSph::r_to_xi</definition>
-        <argsstring>(double r)</argsstring>
-        <name>r_to_xi</name>
-        <qualifiedname>SLGridSph::r_to_xi</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Map radial coordinate to nondimensional coordinate. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="135" column="10"/>
-        <referencedby refid="class_sphere_s_l_1a490f65d960649770981d83d66d958435" compoundref="sphere_s_l_8_h" startline="62" endline="62">SphereSL::rb_max</referencedby>
-        <referencedby refid="class_sphere_s_l_1a6f8a05e49cc970cbf590cd237ca3cd25" compoundref="sphere_s_l_8_h" startline="61" endline="61">SphereSL::rb_min</referencedby>
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-        <type></type>
-        <definition>SLGridSph::SLGridSph</definition>
-        <argsstring>(std::shared_ptr&lt; SphericalModelTable &gt; mod, int lmax, int nmax, int numr, double rmin, double rmax, bool cache, int Cmap, double RMAP, std::string cachename=&quot;.slgrid_sph_cache&quot;, bool Verbose=false)</argsstring>
-        <name>SLGridSph</name>
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-          <type>std::shared_ptr&lt; <ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref> &gt;</type>
-          <declname>mod</declname>
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-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>numr</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>cache</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>Cmap</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>RMAP</declname>
-        </param>
-        <param>
-          <type>std::string</type>
-          <declname>cachename</declname>
-          <defval>&quot;.slgrid_sph_cache&quot;</defval>
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-        <param>
-          <type>bool</type>
-          <declname>Verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Constructor with model table. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="105" column="3"/>
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-        <type></type>
-        <definition>SLGridSph::SLGridSph</definition>
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-        <name>SLGridSph</name>
-        <qualifiedname>SLGridSph::SLGridSph</qualifiedname>
-        <param>
-          <type>std::string</type>
-          <declname>cachename</declname>
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-        <briefdescription>
-<para>Constructor (from cache file) </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="120" column="3"/>
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-        <name>SLGridSph</name>
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-        <param>
-          <type>std::string</type>
-          <declname>modelname</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
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-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
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-        <param>
-          <type>int</type>
-          <declname>numr</declname>
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-        <param>
-          <type>double</type>
-          <declname>rmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>rmax</declname>
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-        <param>
-          <type>bool</type>
-          <declname>cache</declname>
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-        <param>
-          <type>int</type>
-          <declname>Cmap</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>RMAP</declname>
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-        <param>
-          <type>int</type>
-          <declname>DIVERGE</declname>
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-        <param>
-          <type>double</type>
-          <declname>DFAC</declname>
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-        <param>
-          <type>std::string</type>
-          <declname>cachename</declname>
-          <defval>&quot;.slgrid_sph_cache&quot;</defval>
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-        <param>
-          <type>bool</type>
-          <declname>Verbose</declname>
-          <defval>false</defval>
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-        <briefdescription>
-<para>Constructor (uses file <emphasis>model_file_name</emphasis> for file) </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="112" column="3"/>
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-        <type>double</type>
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-        <name>xi_to_r</name>
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-        <param>
-          <type>double</type>
-          <declname>x</declname>
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-        <briefdescription>
-<para>Map nondimensional coordinate to radial coordinate. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="138" column="10"/>
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-        <type></type>
-        <definition>virtual SLGridSph::~SLGridSph</definition>
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-        <name>~SLGridSph</name>
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-<para>Destructor. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::map&lt; std::string, std::string &gt;</type>
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-        <argsstring>(const std::string &amp;cachefile, bool verbose=true)</argsstring>
-        <name>cacheInfo</name>
-        <qualifiedname>SLGridSph::cacheInfo</qualifiedname>
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-          <defval>true</defval>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get density for dimensionless coord with harmonic order l and radial orer n Return all radial order values in Vector Read and print the cache and return the header parameters as a map/dictionary </para>
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-        <type>YAML::Node</type>
-        <definition>static YAML::Node SLGridSph::getHeader</definition>
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-        <name>getHeader</name>
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-        <param>
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-<para>Read the cache and report parameters. </para>
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-    <briefdescription>
-<para>! Spherical SL grid class </para>
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-    <detaileddescription>
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diff --git a/doxyxml/class_s_particle.xml b/doxyxml/class_s_particle.xml
deleted file mode 100644
index 343ab37..0000000
--- a/doxyxml/class_s_particle.xml
+++ /dev/null
@@ -1,774 +0,0 @@
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-        <qualifiedname>SParticle::setSize</qualifiedname>
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-        <name>setSize</name>
-        <qualifiedname>SParticle::setSize</qualifiedname>
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-        <name>SParticle</name>
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-<para>Null constructor. </para>
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-        <name>SParticle</name>
-        <qualifiedname>SParticle::SParticle</qualifiedname>
-        <param>
-          <type>const <ref refid="class_particle" kindref="compound">Particle</ref> &amp;</type>
-          <declname>p</declname>
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-<para>Construct instance from a <ref refid="class_particle" kindref="compound">Particle</ref>. </para>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" line="38" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" bodystart="38" bodyend="38"/>
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-        <name>vel</name>
-        <qualifiedname>SParticle::vel</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
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-        <type>double</type>
-        <definition>double SParticle::vel</definition>
-        <argsstring>(int i)</argsstring>
-        <name>vel</name>
-        <qualifiedname>SParticle::vel</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
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-        <briefdescription>
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-        <type>void</type>
-        <definition>void SParticle::write</definition>
-        <argsstring>(std::ostream &amp;out, bool real4, size_t isiz)</argsstring>
-        <name>write</name>
-        <qualifiedname>SParticle::write</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
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-        <param>
-          <type>size_t</type>
-          <declname>isiz</declname>
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-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/PSP2.H" line="221" column="8"/>
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-        <type>void</type>
-        <definition>void SParticle::write</definition>
-        <argsstring>(std::ostream &amp;out, bool real4, size_t isiz)</argsstring>
-        <name>write</name>
-        <qualifiedname>SParticle::write</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>real4</declname>
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-        <param>
-          <type>size_t</type>
-          <declname>isiz</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>An abbreviated particle class for transferring phase space between processors and writing initial conditions. Changes in or additions to the <ref refid="class_particle" kindref="compound">Particle</ref> class should not affect this class. </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" line="12" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" bodystart="13" bodyend="43"/>
-    <listofallmembers>
-      <member refid="class_s_particle_1ae35d1a9ebc6560653ba922177f1743c5" prot="private" virt="non-virtual"><scope>SParticle</scope><name>cpy</name></member>
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-      <member refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" prot="public" virt="non-virtual"><scope>SParticle</scope><name>iatr</name></member>
-      <member refid="class_s_particle_1ada7b18112aabcc34e13adece0f12fe80" prot="public" virt="non-virtual"><scope>SParticle</scope><name>iatr</name></member>
-      <member refid="class_s_particle_1a41095f11582d1dcc761c7fcab69c56b6" prot="public" virt="non-virtual"><scope>SParticle</scope><name>indx</name></member>
-      <member refid="class_s_particle_1a41095f11582d1dcc761c7fcab69c56b6" prot="public" virt="non-virtual"><scope>SParticle</scope><name>indx</name></member>
-      <member refid="class_s_particle_1ab85d29c67c4d4fc65db641b17e5b6301" prot="public" virt="non-virtual"><scope>SParticle</scope><name>mass</name></member>
-      <member refid="class_s_particle_1a8157fb0d9cf66912cb6701a2ff9633c9" prot="public" virt="non-virtual"><scope>SParticle</scope><name>mass</name></member>
-      <member refid="class_s_particle_1a8157fb0d9cf66912cb6701a2ff9633c9" prot="public" virt="non-virtual"><scope>SParticle</scope><name>mass</name></member>
-      <member refid="class_s_particle_1af2951ccfc489933053cdf4a2c7c1d240" prot="public" virt="non-virtual"><scope>SParticle</scope><name>ndatr</name></member>
-      <member refid="class_s_particle_1af2951ccfc489933053cdf4a2c7c1d240" prot="public" virt="non-virtual"><scope>SParticle</scope><name>ndatr</name></member>
-      <member refid="class_s_particle_1a6a5f63d8da26a14c969db6e041b37bc0" prot="public" virt="non-virtual"><scope>SParticle</scope><name>niatr</name></member>
-      <member refid="class_s_particle_1a6a5f63d8da26a14c969db6e041b37bc0" prot="public" virt="non-virtual"><scope>SParticle</scope><name>niatr</name></member>
-      <member refid="class_s_particle_1ab15e237794b208252f87baef581317d4" prot="public" virt="non-virtual"><scope>SParticle</scope><name>operator[]</name></member>
-      <member refid="class_s_particle_1a850c9d55a0ac2e88ccb548731d6935c3" prot="public" virt="non-virtual"><scope>SParticle</scope><name>phi</name></member>
-      <member refid="class_s_particle_1a850c9d55a0ac2e88ccb548731d6935c3" prot="public" virt="non-virtual"><scope>SParticle</scope><name>phi</name></member>
-      <member refid="class_s_particle_1ab24b8bca532a0d11db807cc44ea3e707" prot="public" virt="non-virtual"><scope>SParticle</scope><name>pos</name></member>
-      <member refid="class_s_particle_1a78846a0b0c51b3cbaf042ae88d7177da" prot="public" virt="non-virtual"><scope>SParticle</scope><name>pos</name></member>
-      <member refid="class_s_particle_1a78846a0b0c51b3cbaf042ae88d7177da" prot="public" virt="non-virtual"><scope>SParticle</scope><name>pos</name></member>
-      <member refid="class_s_particle_1a568a112d821c6291b1dc44371179a6e5" prot="public" virt="non-virtual"><scope>SParticle</scope><name>read</name></member>
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-      <member refid="class_s_particle_1a1e0841e9281e5ff1dd7d57265d4831ee" prot="private" virt="non-virtual"><scope>SParticle</scope><name>s</name></member>
-      <member refid="class_s_particle_1a2ec8fb3cbd496e7c4352cb887e7efe04" prot="public" virt="non-virtual"><scope>SParticle</scope><name>setSize</name></member>
-      <member refid="class_s_particle_1a2ec8fb3cbd496e7c4352cb887e7efe04" prot="public" virt="non-virtual"><scope>SParticle</scope><name>setSize</name></member>
-      <member refid="class_s_particle_1aca1ed0bda038aef357c0e2cc5b13e2f9" prot="public" virt="non-virtual"><scope>SParticle</scope><name>SParticle</name></member>
-      <member refid="class_s_particle_1a0d28bad71d32a66facf9168e8a68ff0f" prot="public" virt="non-virtual"><scope>SParticle</scope><name>SParticle</name></member>
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diff --git a/doxyxml/class_s_ptype.xml b/doxyxml/class_s_ptype.xml
deleted file mode 100644
index 577d9b8..0000000
--- a/doxyxml/class_s_ptype.xml
+++ /dev/null
@@ -1,81 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_s_ptype" kind="class" language="C++" prot="public">
-    <compoundname>SPtype</compoundname>
-    <includes refid="_s_particle_8_h" local="no">SParticle.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_s_ptype_1a2a56999de715223792df1a74f51e3106" prot="private" static="no" mutable="no">
-        <type>MPI_Datatype</type>
-        <definition>MPI_Datatype SPtype::Particletype</definition>
-        <argsstring></argsstring>
-        <name>Particletype</name>
-        <qualifiedname>SPtype::Particletype</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" line="53" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" bodystart="53" bodyend="-1"/>
-        <referencedby refid="class_s_ptype_1a3076c21cada33efc791cb217566cd76b" compoundref="_s_particle_8_h" startline="59" endline="59">operator()</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_s_ptype_1a3076c21cada33efc791cb217566cd76b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>MPI_Datatype</type>
-        <definition>MPI_Datatype SPtype::operator()</definition>
-        <argsstring>()</argsstring>
-        <name>operator()</name>
-        <qualifiedname>SPtype::operator()</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" line="59" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" bodystart="59" bodyend="59"/>
-        <references refid="class_s_ptype_1a2a56999de715223792df1a74f51e3106" compoundref="_s_particle_8_h" startline="53">Particletype</references>
-      </memberdef>
-      <memberdef kind="function" id="class_s_ptype_1a8d88980e8ecab033f89318d5b1ca7a87" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>SPtype::SPtype</definition>
-        <argsstring>()</argsstring>
-        <name>SPtype</name>
-        <qualifiedname>SPtype::SPtype</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" line="56" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_s_ptype_1a3b4572be2a61cdad2e0b08a04924eb38" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>SPtype::~SPtype</definition>
-        <argsstring>()</argsstring>
-        <name>~SPtype</name>
-        <qualifiedname>SPtype::~SPtype</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" line="57" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Create an MPI particle type <ref refid="class_s_particle" kindref="compound">SParticle</ref>. The class creates and registers the particle type. It is freed when the instance goes out of scope and/or is destroyed. </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" line="50" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SParticle.H" bodystart="51" bodyend="60"/>
-    <listofallmembers>
-      <member refid="class_s_ptype_1a3076c21cada33efc791cb217566cd76b" prot="public" virt="non-virtual"><scope>SPtype</scope><name>operator()</name></member>
-      <member refid="class_s_ptype_1a2a56999de715223792df1a74f51e3106" prot="private" virt="non-virtual"><scope>SPtype</scope><name>Particletype</name></member>
-      <member refid="class_s_ptype_1a8d88980e8ecab033f89318d5b1ca7a87" prot="public" virt="non-virtual"><scope>SPtype</scope><name>SPtype</name></member>
-      <member refid="class_s_ptype_1a3b4572be2a61cdad2e0b08a04924eb38" prot="public" virt="non-virtual"><scope>SPtype</scope><name>~SPtype</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_scatter_m_f_p.xml b/doxyxml/class_scatter_m_f_p.xml
deleted file mode 100644
index c5947d0..0000000
--- a/doxyxml/class_scatter_m_f_p.xml
+++ /dev/null
@@ -1,528 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_scatter_m_f_p" kind="class" language="C++" prot="public">
-    <compoundname>ScatterMFP</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_scatter_m_f_p_8_h" local="no">ScatterMFP.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_scatter_m_f_p_1aa6005f8035bcca611fe96f4d547ceac1" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* ScatterMFP::c</definition>
-        <argsstring></argsstring>
-        <name>c</name>
-        <qualifiedname>ScatterMFP::c</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="37" column="13" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="37" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a16ad16ba628e117025528ac5e9a9e3ae" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ScatterMFP::cntacc</definition>
-        <argsstring></argsstring>
-        <name>cntacc</name>
-        <qualifiedname>ScatterMFP::cntacc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="34" column="7" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a4ed6d7668b49ee4ee8325abc344f08aa" prot="private" static="no" mutable="no">
-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; ScatterMFP::cntr</definition>
-        <argsstring></argsstring>
-        <name>cntr</name>
-        <qualifiedname>ScatterMFP::cntr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="24" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="24" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a369d45433d9547c25ef12aa272b3ef1e" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string ScatterMFP::comp_id</definition>
-        <argsstring></argsstring>
-        <name>comp_id</name>
-        <qualifiedname>ScatterMFP::comp_id</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="38" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a5241c197733f89b8e196c3d8b2bbff8a" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double ScatterMFP::dr</definition>
-        <argsstring></argsstring>
-        <name>dr</name>
-        <qualifiedname>ScatterMFP::dr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="23" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a411ba0475adcbe7aa0aeb88365aa7c05" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double* ScatterMFP::dtau</definition>
-        <argsstring></argsstring>
-        <name>dtau</name>
-        <qualifiedname>ScatterMFP::dtau</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a692b94400828d737e665380d5159e44f" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double * ScatterMFP::dtau1</definition>
-        <argsstring></argsstring>
-        <name>dtau1</name>
-        <qualifiedname>ScatterMFP::dtau1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="22" column="15" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1abd94341a0c14cd031882f2b1f20d4b9c" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ScatterMFP::mfp_index</definition>
-        <argsstring></argsstring>
-        <name>mfp_index</name>
-        <qualifiedname>ScatterMFP::mfp_index</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="39" column="7" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a85e0c642d66af1c527a15b6a098dd903" prot="private" static="no" mutable="no">
-        <type>std::normal_distribution</type>
-        <definition>std::normal_distribution ScatterMFP::norm</definition>
-        <argsstring></argsstring>
-        <name>norm</name>
-        <qualifiedname>ScatterMFP::norm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="31" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1ab495cca48d674260bdb2d2bcbe83b343" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ScatterMFP::nscat</definition>
-        <argsstring></argsstring>
-        <name>nscat</name>
-        <qualifiedname>ScatterMFP::nscat</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="21" column="14" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="21" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a73d169aaee5e69fb1f4b454d392dd731" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double ScatterMFP::rmax</definition>
-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>ScatterMFP::rmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="20" column="22" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1ad23096b8721de31192dffeba144b8ffa" prot="private" static="no" mutable="no">
-        <type>vector&lt; <ref refid="_scatter_m_f_p_8_h_1ac13832c7133d31977830c35cd49f0f2a" kindref="member">rpair</ref> &gt;</type>
-        <definition>vector&lt;rpair&gt; ScatterMFP::rr2</definition>
-        <argsstring></argsstring>
-        <name>rr2</name>
-        <qualifiedname>ScatterMFP::rr2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="26" column="11" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="26" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double ScatterMFP::tau</definition>
-        <argsstring></argsstring>
-        <name>tau</name>
-        <qualifiedname>ScatterMFP::tau</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="20" column="10" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1adb6bf7494fe8f2e97f43152fddd2af5f" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double ScatterMFP::tauscat</definition>
-        <argsstring></argsstring>
-        <name>tauscat</name>
-        <qualifiedname>ScatterMFP::tauscat</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="20" column="14" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_scatter_m_f_p_1a9407a7b991a5aa8117a0a4c79c672265" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ScatterMFP::tautab</definition>
-        <argsstring></argsstring>
-        <name>tautab</name>
-        <qualifiedname>ScatterMFP::tautab</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="21" column="7" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="21" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_scatter_m_f_p_1a8109e209a4086ad31b2f363669ff7567" prot="private" static="no" mutable="no">
-        <type>std::uniform_real_distribution</type>
-        <definition>std::uniform_real_distribution ScatterMFP::unif</definition>
-        <argsstring></argsstring>
-        <name>unif</name>
-        <qualifiedname>ScatterMFP::unif</qualifiedname>
-        <briefdescription>
-<para>Pseudorandom generation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="30" column="4" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="30" bodyend="-1"/>
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-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; ScatterMFP::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>ScatterMFP::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/ScatterMFP.H" line="47" column="25" bodyfile="/home/weinberg/Projects/EXP/src/ScatterMFP.H" bodystart="47" bodyend="-1"/>
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-        <type>void *</type>
-        <definition>void * ScatterMFP::determine_acceleration_and_potential_thread</definition>
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-        <reimplements refid="class_external_force_1ae23fdc9cb99c6c1f8884b518659bfc5a">determine_acceleration_and_potential_thread</reimplements>
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-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
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-        <type>void</type>
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-        <qualifiedname>ScatterMFP::get_acceleration_and_potential</qualifiedname>
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-<para>Will be called by clients to evaluate force. </para>
-        </briefdescription>
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-        <type>void</type>
-        <definition>void ScatterMFP::initialize</definition>
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-        <definition>ScatterMFP::ScatterMFP</definition>
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-        <name>ScatterMFP</name>
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-<para>Constructor. </para>
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diff --git a/doxyxml/class_sech2.xml b/doxyxml/class_sech2.xml
deleted file mode 100644
index 989afe9..0000000
--- a/doxyxml/class_sech2.xml
+++ /dev/null
@@ -1,591 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_sech2" kind="class" language="C++" prot="public">
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-    <basecompoundref refid="class_one_d_model" prot="public" virt="non-virtual">OneDModel</basecompoundref>
-    <includes refid="massmodel1d_8_h" local="no">massmodel1d.H</includes>
-    <sectiondef kind="private-attrib">
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-        <type>double</type>
-        <definition>double Sech2::dispx</definition>
-        <argsstring></argsstring>
-        <name>dispx</name>
-        <qualifiedname>Sech2::dispx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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diff --git a/doxyxml/class_sech2_halo.xml b/doxyxml/class_sech2_halo.xml
deleted file mode 100644
index 2bec295..0000000
--- a/doxyxml/class_sech2_halo.xml
+++ /dev/null
@@ -1,784 +0,0 @@
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-      <member refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>dof</name></member>
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-      <member refid="class_sech2_halo_1a5a3779ee0a6c041d226a016029bba335" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>get_dpot</name></member>
-      <member refid="class_sech2_halo_1a071987eef52f3833829579039487bc58" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>get_dpot2</name></member>
-      <member refid="class_one_d_model_table_1add70877c6dedaaafcc44854e41647761" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>get_mass</name></member>
-      <member refid="class_one_d_model_1a7d460c77bbe4df3c606646fc1f85b3cc" prot="public" virt="virtual" ambiguityscope="OneDModel::"><scope>Sech2Halo</scope><name>get_mass</name></member>
-      <member refid="class_sech2_halo_1a38a8bcbc87313c16a9e42a1245e6ee58" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>get_max_radius</name></member>
-      <member refid="class_sech2_halo_1ab2e0e44472cd552e609dd83c649c1337" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>get_min_radius</name></member>
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-      <member refid="class_one_d_model_table_1a7387b5e9a4566c79c3ef947e998347d7" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>get_param</name></member>
-      <member refid="class_sech2_halo_1abdbec9d1f9d9d715bbe14fd8ea29f44f" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>get_pot</name></member>
-      <member refid="class_one_d_model_1adb23181ed139049e72215399fd35903d" prot="public" virt="virtual" ambiguityscope="OneDModel::"><scope>Sech2Halo</scope><name>get_pot</name></member>
-      <member refid="class_sech2_halo_1ac0d7b6ac339e81210d37f546a68f4e8a" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>get_pot_dpot</name></member>
-      <member refid="class_sech2_halo_1adaa205b0bed4acba29d67be2de1dea31" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>get_rho0</name></member>
-      <member refid="class_sech2_halo_1a92b733cae43e8f63f6245d8979010215" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>get_rho0_halo</name></member>
-      <member refid="class_sech2_halo_1aebc66367268c82524b43f0dd7ec6cc2e" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>get_scale_height</name></member>
-      <member refid="class_sech2_halo_1aaa8aa8f37718675efa394a72605b022c" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>get_scale_height_halo</name></member>
-      <member refid="class_one_d_model_table_1aa2adead86bdb5ab0c186c9528d0c6984" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>grid_size</name></member>
-      <member refid="class_sech2_halo_1abc7c22a389f20719d2e677a2813b5e0b" prot="private" virt="non-virtual"><scope>Sech2Halo</scope><name>h</name></member>
-      <member refid="class_one_d_model_table_1a63ffc21df240a99ac5ddddc3e78cfca5" prot="protected" virt="non-virtual"><scope>Sech2Halo</scope><name>half_height</name></member>
-      <member refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" prot="private" virt="non-virtual"><scope>Sech2Halo</scope><name>hh</name></member>
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-      <member refid="class_sech2_halo_1a83386c95dfc8a1454ef0c852f3744dfe" prot="private" virt="non-virtual"><scope>Sech2Halo</scope><name>hmax</name></member>
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-      <member refid="class_one_d_model_table_1a96eb98b80968b9be90bde6edce829481" prot="protected" virt="non-virtual"><scope>Sech2Halo</scope><name>mass</name></member>
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-      <member refid="class_mass_model_1acf360c000464aca6299bc47894672d70" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>ModelID</name></member>
-      <member refid="class_sech2_halo_1a0647984aa8a4b8181c2895c4e626b2bf" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>MU</name></member>
-      <member refid="class_sech2_halo_1a3d3b1850b2cdb3fd2f9213ed974ec5f8" prot="private" virt="non-virtual"><scope>Sech2Halo</scope><name>norm</name></member>
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-      <member refid="class_one_d_model_table_1a307377282a0fa0c0d8a06c979bda5cbc" prot="protected" virt="non-virtual"><scope>Sech2Halo</scope><name>numdf</name></member>
-      <member refid="class_sech2_halo_1afa67df7d56755290505d873198363c76" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>OFFSET</name></member>
-      <member refid="class_one_d_model_table_1a92597f0ed86bcf669a7b834551293e90" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>OneDModelTable</name></member>
-      <member refid="class_one_d_model_table_1a5e281d5772863d714fa51c4d3cf5006b" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>OneDModelTable</name></member>
-      <member refid="class_one_d_model_table_1a75247475b6c835339ea5f019f491168d" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>OneDModelTable</name></member>
-      <member refid="class_one_d_model_table_1a222b7209329a36dabb3461c99d79ec00" prot="protected" virt="non-virtual"><scope>Sech2Halo</scope><name>params</name></member>
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-      <member refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" prot="private" virt="non-virtual"><scope>Sech2Halo</scope><name>reset</name></member>
-      <member refid="class_sech2_halo_1a1a67b0ae932eefe52764cf1750aebf8c" prot="private" virt="non-virtual"><scope>Sech2Halo</scope><name>rho0</name></member>
-      <member refid="class_sech2_halo_1a0ba0ebf7bd0dfc1bc068c70c2e038672" prot="private" virt="non-virtual"><scope>Sech2Halo</scope><name>rho0h</name></member>
-      <member refid="class_sech2_halo_1a8fa1bcf5d0600b81454bff6fbdfe18d1" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>Sech2Halo</name></member>
-      <member refid="class_sech2_halo_1ad8d24d4f7a993052762a68283e9700cc" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>Sech2Halo</name></member>
-      <member refid="class_sech2_halo_1a8ef7a2eb773ae48e9bae1421e7513afb" prot="public" virt="non-virtual"><scope>Sech2Halo</scope><name>set_hmax</name></member>
-      <member refid="class_mass_model_1a95c0338ca07d1b2ea284c3c2605dc9b8" prot="public" virt="virtual"><scope>Sech2Halo</scope><name>~MassModel</name></member>
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-</doxygen>
diff --git a/doxyxml/class_sech2mu.xml b/doxyxml/class_sech2mu.xml
deleted file mode 100644
index 7786611..0000000
--- a/doxyxml/class_sech2mu.xml
+++ /dev/null
@@ -1,708 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_sech2mu" kind="class" language="C++" prot="public">
-    <compoundname>Sech2mu</compoundname>
-    <basecompoundref refid="class_one_d_model" prot="public" virt="non-virtual">OneDModel</basecompoundref>
-    <includes refid="massmodel1d_8_h" local="no">massmodel1d.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Sech2mu::dispx</definition>
-        <argsstring></argsstring>
-        <name>dispx</name>
-        <qualifiedname>Sech2mu::dispx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="239" column="16" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" bodystart="239" bodyend="-1"/>
-        <referencedby refid="class_sech2mu_1a52fa1422592a401f44099f9e14a2eff4" compoundref="massmodel1d_8_h" startline="344" endline="346">dfde</referencedby>
-        <referencedby refid="class_sech2mu_1a2f286c63e1fc3a89aba461737c68da45" compoundref="massmodel1d_8_h" startline="348" endline="350">dfdv</referencedby>
-        <referencedby refid="class_sech2mu_1abdf3f40cd28488793293c00422cff081" compoundref="massmodel1d_8_h" startline="340" endline="342">distf</referencedby>
-        <referencedby refid="class_sech2mu_1a235547f97216c8f93b4707319bbd7f1b" compoundref="massmodel1d_8_h" startline="261" endline="274">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1a4586a05af366e649ec20626de2b5bc4a" compoundref="massmodel1d_8_h" startline="246" endline="259">Sech2mu</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Sech2mu::dispz</definition>
-        <argsstring></argsstring>
-        <name>dispz</name>
-        <qualifiedname>Sech2mu::dispz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="239" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" bodystart="239" bodyend="-1"/>
-        <referencedby refid="class_sech2mu_1a52fa1422592a401f44099f9e14a2eff4" compoundref="massmodel1d_8_h" startline="344" endline="346">dfde</referencedby>
-        <referencedby refid="class_sech2mu_1a2f286c63e1fc3a89aba461737c68da45" compoundref="massmodel1d_8_h" startline="348" endline="350">dfdv</referencedby>
-        <referencedby refid="class_sech2mu_1abdf3f40cd28488793293c00422cff081" compoundref="massmodel1d_8_h" startline="340" endline="342">distf</referencedby>
-        <referencedby refid="class_sech2mu_1a21624b0bc54448c5a7150108d6250eb7" compoundref="massmodel1d_8_h" startline="303" endline="307">get_dpot</referencedby>
-        <referencedby refid="class_sech2mu_1ae738a3a533ac38ce522e4418c4cffc8d" compoundref="massmodel1d_8_h" startline="309" endline="313">get_dpot2</referencedby>
-        <referencedby refid="class_sech2mu_1a3357b99372f2ad6709547eacbe23564a" compoundref="massmodel1d_8_h" startline="298" endline="301">get_pot</referencedby>
-        <referencedby refid="class_sech2mu_1ac971fb0a153f65704a7d1d258f2534f8" compoundref="massmodel1d_8_h" startline="315" endline="320">get_pot_dpot</referencedby>
-        <referencedby refid="class_sech2mu_1a235547f97216c8f93b4707319bbd7f1b" compoundref="massmodel1d_8_h" startline="261" endline="274">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1a4586a05af366e649ec20626de2b5bc4a" compoundref="massmodel1d_8_h" startline="246" endline="259">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1acc90f957b33d93bd9c899f849f87dc81" compoundref="massmodel1d_8_h" startline="276" endline="286">setMu</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_sech2mu_1ad18329a6b217fc21dab556d595770987" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Sech2mu::dnorm</definition>
-        <argsstring></argsstring>
-        <name>dnorm</name>
-        <qualifiedname>Sech2mu::dnorm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="240" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" bodystart="240" bodyend="-1"/>
-        <referencedby refid="class_sech2mu_1aefb389703162c82bdbd378ffb4ac5b6e" compoundref="massmodel1d_8_h" startline="292" endline="296">get_density</referencedby>
-        <referencedby refid="class_sech2mu_1a235547f97216c8f93b4707319bbd7f1b" compoundref="massmodel1d_8_h" startline="261" endline="274">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1a4586a05af366e649ec20626de2b5bc4a" compoundref="massmodel1d_8_h" startline="246" endline="259">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1acc90f957b33d93bd9c899f849f87dc81" compoundref="massmodel1d_8_h" startline="276" endline="286">setMu</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_sech2mu_1a200e81749ff0cdc2d6823f4f3b9a412d" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Sech2mu::fnorm</definition>
-        <argsstring></argsstring>
-        <name>fnorm</name>
-        <qualifiedname>Sech2mu::fnorm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="240" column="22" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" bodystart="240" bodyend="-1"/>
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-        <referencedby refid="class_sech2mu_1a2f286c63e1fc3a89aba461737c68da45" compoundref="massmodel1d_8_h" startline="348" endline="350">dfdv</referencedby>
-        <referencedby refid="class_sech2mu_1abdf3f40cd28488793293c00422cff081" compoundref="massmodel1d_8_h" startline="340" endline="342">distf</referencedby>
-        <referencedby refid="class_sech2mu_1a235547f97216c8f93b4707319bbd7f1b" compoundref="massmodel1d_8_h" startline="261" endline="274">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1a4586a05af366e649ec20626de2b5bc4a" compoundref="massmodel1d_8_h" startline="246" endline="259">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1acc90f957b33d93bd9c899f849f87dc81" compoundref="massmodel1d_8_h" startline="276" endline="286">setMu</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Sech2mu::h</definition>
-        <argsstring></argsstring>
-        <name>h</name>
-        <qualifiedname>Sech2mu::h</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" line="238" column="13" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H" bodystart="238" bodyend="-1"/>
-        <referencedby refid="class_sech2mu_1aefb389703162c82bdbd378ffb4ac5b6e" compoundref="massmodel1d_8_h" startline="292" endline="296">get_density</referencedby>
-        <referencedby refid="class_sech2mu_1a21624b0bc54448c5a7150108d6250eb7" compoundref="massmodel1d_8_h" startline="303" endline="307">get_dpot</referencedby>
-        <referencedby refid="class_sech2mu_1ae738a3a533ac38ce522e4418c4cffc8d" compoundref="massmodel1d_8_h" startline="309" endline="313">get_dpot2</referencedby>
-        <referencedby refid="class_sech2mu_1a280b38413667e2bbc578ff0d1880cb96" compoundref="massmodel1d_8_h" startline="288" endline="290">get_mass</referencedby>
-        <referencedby refid="class_sech2mu_1a2322562fbeaabc23888a8d3bd9c58775" compoundref="massmodel1d_8_h" startline="335" endline="335">get_max_radius</referencedby>
-        <referencedby refid="class_sech2mu_1a3357b99372f2ad6709547eacbe23564a" compoundref="massmodel1d_8_h" startline="298" endline="301">get_pot</referencedby>
-        <referencedby refid="class_sech2mu_1ac971fb0a153f65704a7d1d258f2534f8" compoundref="massmodel1d_8_h" startline="315" endline="320">get_pot_dpot</referencedby>
-        <referencedby refid="class_sech2mu_1a3c6153bc8cd4ca73ac9e22a16aa33c9b" compoundref="massmodel1d_8_h" startline="336" endline="336">get_scale_height</referencedby>
-        <referencedby refid="class_sech2mu_1a235547f97216c8f93b4707319bbd7f1b" compoundref="massmodel1d_8_h" startline="261" endline="274">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1a4586a05af366e649ec20626de2b5bc4a" compoundref="massmodel1d_8_h" startline="246" endline="259">Sech2mu</referencedby>
-        <referencedby refid="class_sech2mu_1acc90f957b33d93bd9c899f849f87dc81" compoundref="massmodel1d_8_h" startline="276" endline="286">setMu</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Sech2mu::knorm</definition>
-        <argsstring></argsstring>
-        <name>knorm</name>
-        <qualifiedname>Sech2mu::knorm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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diff --git a/doxyxml/class_shells.xml b/doxyxml/class_shells.xml
deleted file mode 100644
index 9b1b7ad..0000000
--- a/doxyxml/class_shells.xml
+++ /dev/null
@@ -1,866 +0,0 @@
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-<parameteritem>
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-<parametername>nselect</parametername>
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-<parameterdescription>
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diff --git a/doxyxml/class_sim_ann.xml b/doxyxml/class_sim_ann.xml
deleted file mode 100644
index bfc4c01..0000000
--- a/doxyxml/class_sim_ann.xml
+++ /dev/null
@@ -1,859 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_sim_ann" kind="class" language="C++" prot="public">
-    <compoundname>SimAnn</compoundname>
-    <includes refid="_sim_ann_8_h" local="no">SimAnn.H</includes>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_sim_ann_1a0ec2e143852051e083e5dd88c8930b51" prot="private" static="no">
-        <type>std::function&lt; double(std::vector&lt; double &gt; &amp;)&gt;</type>
-        <definition>typedef std::function&lt;double(std::vector&lt;double&gt;&amp;)&gt; SimAnn::Func1d</definition>
-        <argsstring></argsstring>
-        <name>Func1d</name>
-        <qualifiedname>SimAnn::Func1d</qualifiedname>
-        <briefdescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/SimAnn.H" line="16" column="25" bodyfile="/home/weinberg/Projects/EXP/include/SimAnn.H" bodystart="16" bodyend="-1"/>
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-        <type>std::function&lt; std::vector&lt; double &gt;(std::vector&lt; double &gt; &amp;)&gt;</type>
-        <definition>typedef std::function&lt;std::vector&lt;double&gt;(std::vector&lt;double&gt;&amp;)&gt; SimAnn::FuncMap</definition>
-        <argsstring></argsstring>
-        <name>FuncMap</name>
-        <qualifiedname>SimAnn::FuncMap</qualifiedname>
-        <briefdescription>
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-        <type>double</type>
-        <definition>double SimAnn::c_jump</definition>
-        <argsstring></argsstring>
-        <name>c_jump</name>
-        <qualifiedname>SimAnn::c_jump</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/SimAnn.H" line="32" column="10" bodyfile="/home/weinberg/Projects/EXP/include/SimAnn.H" bodystart="32" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sim_ann_1af98bd436f34dad13b09ba2465364684a" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SimAnn::ddwell</definition>
-        <argsstring></argsstring>
-        <name>ddwell</name>
-        <qualifiedname>SimAnn::ddwell</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SimAnn.H" line="24" column="7" bodyfile="/home/weinberg/Projects/EXP/include/SimAnn.H" bodystart="24" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double SimAnn::dt</definition>
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-        <name>dt</name>
-        <qualifiedname>SimAnn::dt</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/SimAnn.H" line="29" column="10" bodyfile="/home/weinberg/Projects/EXP/include/SimAnn.H" bodystart="29" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double SimAnn::dy</definition>
-        <argsstring></argsstring>
-        <name>dy</name>
-        <qualifiedname>SimAnn::dy</qualifiedname>
-        <briefdescription>
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-        <type>int</type>
-        <definition>int SimAnn::err</definition>
-        <argsstring></argsstring>
-        <name>err</name>
-        <qualifiedname>SimAnn::err</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/SimAnn.H" line="38" column="7" bodyfile="/home/weinberg/Projects/EXP/include/SimAnn.H" bodystart="38" bodyend="-1"/>
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-        <type>std::string</type>
-        <definition>std::string SimAnn::fname</definition>
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-        <name>fname</name>
-        <qualifiedname>SimAnn::fname</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/SimAnn.H" line="43" column="15" bodyfile="/home/weinberg/Projects/EXP/include/SimAnn.H" bodystart="43" bodyend="-1"/>
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-        <type>std::mt19937</type>
-        <definition>std::mt19937 SimAnn::gen</definition>
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-        <name>gen</name>
-        <qualifiedname>SimAnn::gen</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/SimAnn.H" line="35" column="16" bodyfile="/home/weinberg/Projects/EXP/include/SimAnn.H" bodystart="35" bodyend="-1"/>
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diff --git a/doxyxml/class_sing_isothermal_sphere.xml b/doxyxml/class_sing_isothermal_sphere.xml
deleted file mode 100644
index c8709e8..0000000
--- a/doxyxml/class_sing_isothermal_sphere.xml
+++ /dev/null
@@ -1,549 +0,0 @@
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-        <references refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" compoundref="isothermal_8_h" startline="14">F</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-        <type>double</type>
-        <definition>double SingIsothermalSphere::dfde</definition>
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-        <name>dfde</name>
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-          <type>double</type>
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-        <param>
-          <type>double</type>
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-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="79" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="79" bodyend="81"/>
-        <references refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" compoundref="isothermal_8_h" startline="14">F</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-        <type>double</type>
-        <definition>double SingIsothermalSphere::dfdl</definition>
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-        <reimplements refid="class_axi_sym_model_1a120cec5af54e43d727f83df8678cc93b">dfdl</reimplements>
-        <param>
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-        <param>
-          <type>double</type>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="83" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="83" bodyend="85"/>
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-        <type>double</type>
-        <definition>double SingIsothermalSphere::distf</definition>
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-        <name>distf</name>
-        <qualifiedname>SingIsothermalSphere::distf</qualifiedname>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="75" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="75" bodyend="77"/>
-        <references refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" compoundref="isothermal_8_h" startline="14">F</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-      <memberdef kind="function" id="class_sing_isothermal_sphere_1aac752fdaa2a4b6cb237e978abb78f6fa" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SingIsothermalSphere::get_density</definition>
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-        <reimplements refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</reimplements>
-        <param>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="39" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="39" bodyend="43"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-        <type>double</type>
-        <definition>double SingIsothermalSphere::get_dpot</definition>
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-        <reimplements refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845">get_dpot</reimplements>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="51" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="51" bodyend="55"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-        <type>double</type>
-        <definition>double SingIsothermalSphere::get_dpot2</definition>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="57" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="57" bodyend="61"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-        <type>double</type>
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-        <briefdescription>
-<para>Required member functions. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="33" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="33" bodyend="37"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-      <memberdef kind="function" id="class_sing_isothermal_sphere_1ab3da3798edc39fb2786810bff3c2666f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="73" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="73" bodyend="73"/>
-        <references refid="class_sing_isothermal_sphere_1abc0a760218b4d83fb09b73c7434bf239" compoundref="isothermal_8_h" startline="13">rmax</references>
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-        <type>double</type>
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-<para>Addiional member functions. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="72" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="72" bodyend="72"/>
-        <references refid="class_sing_isothermal_sphere_1a3f25357ec6077d41c7b64df219be72d4" compoundref="isothermal_8_h" startline="12">rmin</references>
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-      <memberdef kind="function" id="class_sing_isothermal_sphere_1ab47f2182f44a6283f80c5e5edda7bf79" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SingIsothermalSphere::get_pot</definition>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="45" column="10" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="45" bodyend="49"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-        <type>void</type>
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-        <param>
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-        <param>
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-        <location file="/home/weinberg/Projects/EXP/include/isothermal.H" line="63" column="8" bodyfile="/home/weinberg/Projects/EXP/include/isothermal.H" bodystart="63" bodyend="66"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-        <param>
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-        <param>
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-<para>Constructor. </para>
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-        <references refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" compoundref="massmodel_8_h" startline="79">MassModel::dim</references>
-        <references refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" compoundref="massmodel_8_h" startline="165">AxiSymModel::dist_defined</references>
-        <references refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" compoundref="isothermal_8_h" startline="14">F</references>
-        <references refid="class_mass_model_1acf360c000464aca6299bc47894672d70" compoundref="massmodel_8_h" startline="81">MassModel::ModelID</references>
-        <references refid="class_sing_isothermal_sphere_1abc0a760218b4d83fb09b73c7434bf239" compoundref="isothermal_8_h" startline="13">rmax</references>
-        <references refid="class_sing_isothermal_sphere_1a3f25357ec6077d41c7b64df219be72d4" compoundref="isothermal_8_h" startline="12">rmin</references>
-        <references refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" compoundref="isothermal_8_h" startline="11">rot</references>
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-      <member refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>dim</name></member>
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-      <member refid="class_sing_isothermal_sphere_1afd94754da7dbf1db3441fd7961d89193" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>distf</name></member>
-      <member refid="class_axi_sym_model_1a526eabe43c3685815c0fab271accbe32" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>dKgrid</name></member>
-      <member refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>dof</name></member>
-      <member refid="class_axi_sym_model_1a86935282f15c2976cd9d5faef793d63e" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>Egrid</name></member>
-      <member refid="class_axi_sym_model_1aedf45b15e0286153ef407f957a1eebf7" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>EgridMass</name></member>
-      <member refid="class_axi_sym_model_1a8ee767a8941390c7816d9c1c27bb4334" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>Emax_grid</name></member>
-      <member refid="class_axi_sym_model_1acf573aca18c8e1687d639133d5710ea7" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>Emin_grid</name></member>
-      <member refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" prot="private" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>F</name></member>
-      <member refid="class_axi_sym_model_1aeda764e1f1145cf03bc79e89cb5f28ee" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>Gauss</name></member>
-      <member refid="class_axi_sym_model_1af60c7d2a97b4e2242ece29ba77f990a8" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_E</name></member>
-      <member refid="class_axi_sym_model_1a85758608cec039affbc42c2ad3390056" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_ecut</name></member>
-      <member refid="class_axi_sym_model_1a89d1c8c1a334e17d164229404284b1aa" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_EJ</name></member>
-      <member refid="class_axi_sym_model_1ad3e1a1fcfe55dfa0f9332673faaad460" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_firstime</name></member>
-      <member refid="class_axi_sym_model_1a0256603484bb0820fe8ec15cc0f88a84" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_firstime_E</name></member>
-      <member refid="class_axi_sym_model_1a16b08425c760dcb7fe24635c05a4d9b1" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_firstime_jeans</name></member>
-      <member refid="class_axi_sym_model_1a5b9f30c0297a19e48806f53aa6b9d68e" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_fmax</name></member>
-      <member refid="class_axi_sym_model_1aaf38968f265e18cf20e403041279435c" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_fomax</name></member>
-      <member refid="class_axi_sym_model_1a2b491db27d15b7b20b6f9ab473373d90" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_itmax</name></member>
-      <member refid="class_axi_sym_model_1a739b1e9027c37122906c3f38d88b3a17" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_K</name></member>
-      <member refid="class_axi_sym_model_1a1df0ddafb9d52556b7306aac0b4d1390" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_kmin</name></member>
-      <member refid="class_axi_sym_model_1a2ddd661afb64be0edc0c903cc1d0d6a3" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_logr</name></member>
-      <member refid="class_axi_sym_model_1a21d0612b687d8f4e2fa57f45ebea5ad9" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_mass</name></member>
-      <member refid="class_axi_sym_model_1ac697c676c4cdf1a2f6fd9aaa0afc3cf1" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_N</name></member>
-      <member refid="class_axi_sym_model_1a274294584539a1bf61ddcb08d28385e4" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_orb</name></member>
-      <member refid="class_axi_sym_model_1a29297280d1fb4603b2138a7a2ede86f4" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>gen_point</name></member>
-      <member refid="class_axi_sym_model_1a8ec2585dc6f33e2ebae4f8dd3d22fc5a" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>gen_point</name></member>
-      <member refid="class_axi_sym_model_1a5e4cb31e8463807b1b14b3858c5c03b2" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>gen_point</name></member>
-      <member refid="class_axi_sym_model_1a65a0d8629fdcf8dcb1e3bcf17eee2fd0" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_point_2d</name></member>
-      <member refid="class_axi_sym_model_1a18ecb1fa667cf977306b34d3dab34ed1" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_point_2d</name></member>
-      <member refid="class_axi_sym_model_1a98fb5e4481e2ee8ecc7a47db1ae33f44" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_point_3d</name></member>
-      <member refid="class_axi_sym_model_1a20602aa25410c1f5d2bc3bf017899049" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_point_3d</name></member>
-      <member refid="class_axi_sym_model_1adcafd558768aeb72e0cc483f231a1be5" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>gen_point_jeans</name></member>
-      <member refid="class_axi_sym_model_1a13d7af1df29796004e2d14194d8d8c7a" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_point_jeans_3d</name></member>
-      <member refid="class_axi_sym_model_1a35aead49704365788684b280e04c21f2" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_rloc</name></member>
-      <member refid="class_axi_sym_model_1a0dd4a002aead3430280c95b84a33848c" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_rmin</name></member>
-      <member refid="class_axi_sym_model_1a8fd26f16e980f9ca09582c43d37d556b" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_tolE</name></member>
-      <member refid="class_axi_sym_model_1a34258a7b205c15211b94d68869ff481a" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>gen_tolK</name></member>
-      <member refid="class_axi_sym_model_1a524ea3beb7a799ffa2c5f90afbcf0bd7" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>gen_velocity</name></member>
-      <member refid="class_sing_isothermal_sphere_1aac752fdaa2a4b6cb237e978abb78f6fa" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>get_density</name></member>
-      <member refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc" prot="public" virt="virtual" ambiguityscope="AxiSymModel::"><scope>SingIsothermalSphere</scope><name>get_density</name></member>
-      <member refid="class_sing_isothermal_sphere_1a1b9b82602ad234333438ea63c5444df1" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>get_dpot</name></member>
-      <member refid="class_sing_isothermal_sphere_1a210a5ddff4461cf1d3243a02a6478ed3" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>get_dpot2</name></member>
-      <member refid="class_sing_isothermal_sphere_1ab63b9164597005000c18be9c66c9e20f" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>get_mass</name></member>
-      <member refid="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787" prot="public" virt="virtual" ambiguityscope="AxiSymModel::"><scope>SingIsothermalSphere</scope><name>get_mass</name></member>
-      <member refid="class_sing_isothermal_sphere_1ab3da3798edc39fb2786810bff3c2666f" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>get_max_radius</name></member>
-      <member refid="class_sing_isothermal_sphere_1a5ed96a9928fd68210572d8f9c1158077" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>get_min_radius</name></member>
-      <member refid="class_sing_isothermal_sphere_1ab47f2182f44a6283f80c5e5edda7bf79" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>get_pot</name></member>
-      <member refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc" prot="public" virt="virtual" ambiguityscope="AxiSymModel::"><scope>SingIsothermalSphere</scope><name>get_pot</name></member>
-      <member refid="class_sing_isothermal_sphere_1ad03dc3e35204f79725d280b625b1f1ad" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>get_pot_dpot</name></member>
-      <member refid="class_axi_sym_model_1a9e96775fb63f7ad15e20ed12ada30e66" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>Jmax</name></member>
-      <member refid="class_axi_sym_model_1a95335dec87e9759cfb620c1cafb10a83" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>Kgrid</name></member>
-      <member refid="class_mass_model_1acf360c000464aca6299bc47894672d70" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>ModelID</name></member>
-      <member refid="class_axi_sym_model_1a793a2dff2246be92c1e4b2ff900087a1" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>numj</name></member>
-      <member refid="class_axi_sym_model_1a0c33462222d9cb53229f9572b07cf792" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>numr</name></member>
-      <member refid="class_axi_sym_model_1a1f18cc5ef08cdb02dcf6d794410c04f6" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>Rgrid</name></member>
-      <member refid="class_sing_isothermal_sphere_1abc0a760218b4d83fb09b73c7434bf239" prot="private" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>rmax</name></member>
-      <member refid="class_sing_isothermal_sphere_1a3f25357ec6077d41c7b64df219be72d4" prot="private" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>rmin</name></member>
-      <member refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" prot="private" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>rot</name></member>
-      <member refid="class_axi_sym_model_1acb659b6dc20ae1410997e69144677423" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>set_Ecut</name></member>
-      <member refid="class_axi_sym_model_1a17660c094f1c143f779c7ce7e667de86" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>set_itmax</name></member>
-      <member refid="class_sing_isothermal_sphere_1a4cbfc656503d58dfc1ac24682b7fc8bb" prot="public" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>SingIsothermalSphere</name></member>
-      <member refid="class_axi_sym_model_1a4d9c94aa4ebf8308dbb660e9f53093e1" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>Unit</name></member>
-      <member refid="class_axi_sym_model_1a624c90f1d36963b7b023b9818a41b43b" prot="protected" virt="non-virtual"><scope>SingIsothermalSphere</scope><name>wrvector</name></member>
-      <member refid="class_axi_sym_model_1ac9a6c290463cfe45d95656d37c0c45f8" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>~AxiSymModel</name></member>
-      <member refid="class_mass_model_1a95c0338ca07d1b2ea284c3c2605dc9b8" prot="public" virt="virtual"><scope>SingIsothermalSphere</scope><name>~MassModel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_slab_model.xml b/doxyxml/class_slab_model.xml
deleted file mode 100644
index 3890bbd..0000000
--- a/doxyxml/class_slab_model.xml
+++ /dev/null
@@ -1,135 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_slab_model" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>SlabModel</compoundname>
-    <includes refid="_s_l_grid_m_p2_8_h" local="no">SLGridMP2.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_slab_model_1af46aec018ca87986e34255969501b979" prot="protected" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string SlabModel::id</definition>
-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>SlabModel::id</qualifiedname>
-        <briefdescription>
-<para>For cache identification. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="236" column="15" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="236" bodyend="-1"/>
-        <referencedby refid="class_slab_model_1a5da645e2820ccc913eb6c0de81a6ad13" compoundref="_s_l_grid_m_p2_8_h" startline="253" endline="253">ID</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-func">
-      <memberdef kind="function" id="class_slab_model_1a67a16e8d5d31282974d0c3a9071c0054" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::shared_ptr&lt; <ref refid="class_slab_model" kindref="compound">SlabModel</ref> &gt;</type>
-        <definition>static std::shared_ptr&lt; SlabModel &gt; SlabModel::createModel</definition>
-        <argsstring>(const std::string type)</argsstring>
-        <name>createModel</name>
-        <qualifiedname>SlabModel::createModel</qualifiedname>
-        <param>
-          <type>const std::string</type>
-          <declname>type</declname>
-        </param>
-        <briefdescription>
-<para>Factory constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="241" column="26"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_slab_model_1acf84752a8838c0b2f1c02e2b395e45c3" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double SlabModel::dens</definition>
-        <argsstring>(double z)=0</argsstring>
-        <name>dens</name>
-        <qualifiedname>SlabModel::dens</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Return the surface density. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="250" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_slab_model_1a25670aa6c64fdaf1e5b1d818398837e6" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double SlabModel::dpot</definition>
-        <argsstring>(double z)=0</argsstring>
-        <name>dpot</name>
-        <qualifiedname>SlabModel::dpot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Return the derivative of the potential. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="247" column="18"/>
-      </memberdef>
-      <memberdef kind="function" id="class_slab_model_1a5da645e2820ccc913eb6c0de81a6ad13" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::string</type>
-        <definition>std::string SlabModel::ID</definition>
-        <argsstring>() const</argsstring>
-        <name>ID</name>
-        <qualifiedname>SlabModel::ID</qualifiedname>
-        <briefdescription>
-<para>Get model ID. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="253" column="15" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="253" bodyend="253"/>
-        <references refid="class_slab_model_1af46aec018ca87986e34255969501b979" compoundref="_s_l_grid_m_p2_8_h" startline="236">id</references>
-      </memberdef>
-      <memberdef kind="function" id="class_slab_model_1a674b8108920991da09a93432c15c6fbf" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double SlabModel::pot</definition>
-        <argsstring>(double z)=0</argsstring>
-        <name>pot</name>
-        <qualifiedname>SlabModel::pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <briefdescription>
-<para>Return the potential. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="244" column="18"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Target density models for slabs. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/SLGridMP2.H" line="232" column="1" bodyfile="/home/weinberg/Projects/EXP/include/SLGridMP2.H" bodystart="233" bodyend="254"/>
-    <listofallmembers>
-      <member refid="class_slab_model_1a67a16e8d5d31282974d0c3a9071c0054" prot="public" virt="non-virtual"><scope>SlabModel</scope><name>createModel</name></member>
-      <member refid="class_slab_model_1acf84752a8838c0b2f1c02e2b395e45c3" prot="public" virt="pure-virtual"><scope>SlabModel</scope><name>dens</name></member>
-      <member refid="class_slab_model_1a25670aa6c64fdaf1e5b1d818398837e6" prot="public" virt="pure-virtual"><scope>SlabModel</scope><name>dpot</name></member>
-      <member refid="class_slab_model_1af46aec018ca87986e34255969501b979" prot="protected" virt="non-virtual"><scope>SlabModel</scope><name>id</name></member>
-      <member refid="class_slab_model_1a5da645e2820ccc913eb6c0de81a6ad13" prot="public" virt="non-virtual"><scope>SlabModel</scope><name>ID</name></member>
-      <member refid="class_slab_model_1a674b8108920991da09a93432c15c6fbf" prot="public" virt="pure-virtual"><scope>SlabModel</scope><name>pot</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_slab_s_l.xml b/doxyxml/class_slab_s_l.xml
deleted file mode 100644
index ea42831..0000000
--- a/doxyxml/class_slab_s_l.xml
+++ /dev/null
@@ -1,946 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_slab_s_l" kind="class" language="C++" prot="public">
-    <compoundname>SlabSL</compoundname>
-    <basecompoundref refid="class_pot_accel" prot="public" virt="non-virtual">PotAccel</basecompoundref>
-    <includes refid="_slab_s_l_8_h" local="no">SlabSL.H</includes>
-    <innerclass refid="struct_slab_s_l_1_1_slab_s_l_coef_header" prot="private">SlabSL::SlabSLCoefHeader</innerclass>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_slab_s_l_1a522d719367477fc609ef5da4851c77c2" prot="private" static="no">
-        <type>Eigen::Tensor&lt; std::complex&lt; double &gt;, 3 &gt;</type>
-        <definition>using SlabSL::coefType =  Eigen::Tensor&lt;std::complex&lt;double&gt;, 3&gt;</definition>
-        <argsstring></argsstring>
-        <name>coefType</name>
-        <qualifiedname>SlabSL::coefType</qualifiedname>
-        <briefdescription>
-<para>Coefficients are a 3-tensor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="42" column="3" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="42" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_slab_s_l_1a0cf74b3103814010731c05f9cba94498" prot="private" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_slab_s_l_1a522d719367477fc609ef5da4851c77c2" kindref="member">coefType</ref> &gt;</type>
-        <definition>using SlabSL::coefTypePtr =  std::shared_ptr&lt;coefType&gt;</definition>
-        <argsstring></argsstring>
-        <name>coefTypePtr</name>
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-        <definition>SlabSLCoefHeader SlabSL::coefheader</definition>
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-        <name>coefheader</name>
-        <qualifiedname>SlabSL::coefheader</qualifiedname>
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-<para>For updating levels. </para>
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-        <name>expccof</name>
-        <qualifiedname>SlabSL::expccof</qualifiedname>
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-<para>Current coefficient tensor. </para>
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-        <definition>std::vector&lt;coefTypePtr&gt; SlabSL::expccofL</definition>
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-        <definition>std::shared_ptr&lt;SLGridSlab&gt; SlabSL::grid</definition>
-        <argsstring></argsstring>
-        <name>grid</name>
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-        <argsstring></argsstring>
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-        </inbodydescription>
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-        <name>imy</name>
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-        <briefdescription>
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-        <name>imz</name>
-        <qualifiedname>SlabSL::imz</qualifiedname>
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-        <name>jmax</name>
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-        <definition>std::complex&lt;double&gt; SlabSL::kfac</definition>
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-        <name>ngrid</name>
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-        <name>nmaxx</name>
-        <qualifiedname>SlabSL::nmaxx</qualifiedname>
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-        <name>ID</name>
-        <qualifiedname>SlabSL::ID</qualifiedname>
-        <initializer>=1</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="186" column="20" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="186" bodyend="-1"/>
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-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; SlabSL::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>SlabSL::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="194" column="25" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="194" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>SlabSL::id</qualifiedname>
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-<para>Id string. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="199" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="199" bodyend="-1"/>
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-        <type>void</type>
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-        <name>compute_multistep_coefficients</name>
-        <qualifiedname>SlabSL::compute_multistep_coefficients</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-<para>Extrapolate and sum coefficents per multistep level to get a complete set of coefficients for force evaluation at an intermediate time step </para>
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-        <inbodydescription>
-        </inbodydescription>
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-        <definition>void * SlabSL::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>SlabSL::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
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-        <briefdescription>
-<para>Multithreading implementation of the force computation. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="150" column="9"/>
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-        <type>void</type>
-        <definition>void SlabSL::determine_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>SlabSL::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Usual evaluation interface. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="128" column="8"/>
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-      <memberdef kind="function" id="class_slab_s_l_1a86e9fff4171b9d29f9550ce73727f1c0" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * SlabSL::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
-        <qualifiedname>SlabSL::determine_coefficients_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49">determine_coefficients_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
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-        <briefdescription>
-<para>Threading. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="149" column="9"/>
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-      <memberdef kind="function" id="class_slab_s_l_1a0424b21e20c21a17fd2180fc0b5eeba1" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void SlabSL::get_acceleration_and_potential</definition>
-        <argsstring>(Component *)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>SlabSL::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>The main force evaluation routine to be called by clients. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="129" column="8"/>
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-        <type>void</type>
-        <definition>virtual void SlabSL::multistep_update</definition>
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-        <name>multistep_update</name>
-        <qualifiedname>SlabSL::multistep_update</qualifiedname>
-        <reimplements refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a">multistep_update</reimplements>
-        <param>
-          <type>int</type>
-          <declname>cur</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>next</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-<para>Implementation of level shifts. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="178" column="16"/>
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-      <memberdef kind="function" id="class_slab_s_l_1a200cb31ebcaa0d7573aece5765d5a0bb" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SlabSL::multistep_update_begin</definition>
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-        <name>multistep_update_begin</name>
-        <qualifiedname>SlabSL::multistep_update_begin</qualifiedname>
-        <reimplements refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381">multistep_update_begin</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step coefficient table when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="177" column="16"/>
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-      <memberdef kind="function" id="class_slab_s_l_1a7cffd18e053e3cdf8cfc459430019238" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
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-        <name>multistep_update_finish</name>
-        <qualifiedname>SlabSL::multistep_update_finish</qualifiedname>
-        <reimplements refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e">multistep_update_finish</reimplements>
-        <briefdescription>
-<para>Execute to finish level shifts for particles. </para>
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-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="179" column="16"/>
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-        <type>void</type>
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-        <name>swap_coefs</name>
-        <qualifiedname>SlabSL::swap_coefs</qualifiedname>
-        <param>
-          <type>std::vector&lt; <ref refid="class_slab_s_l_1a522d719367477fc609ef5da4851c77c2" kindref="member">coefType</ref> &gt; &amp;</type>
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-        <param>
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-          <declname>to</declname>
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-        <briefdescription>
-<para><ref refid="class_swap" kindref="compound">Swap</ref> coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="133" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="133" bodyend="145"/>
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-        <type>void</type>
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-        <name>initialize</name>
-        <qualifiedname>SlabSL::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
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-<para>Parse parameters and initialize on first call. </para>
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-        </inbodydescription>
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-        <type>void</type>
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-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
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-        <briefdescription>
-<para>Coefficient output. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type></type>
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-        <name>SlabSL</name>
-        <qualifiedname>SlabSL::SlabSL</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
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-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
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-<para>Constructor. </para>
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-<para>Destructor. </para>
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-<para>This routine computes the potential, acceleration and density using expansion periodic in X &amp; Y and outgoing vacuum boundary condtions in Z </para>
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-      <member refid="class_slab_s_l_1aeb08b2c1dd672a3f6171fe67db1daa20" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>nmaxy</name></member>
-      <member refid="class_slab_s_l_1aa98601cf636258c046366cf1cd3f2f94" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>nmaxz</name></member>
-      <member refid="class_slab_s_l_1a5230854427d717fc77cfdff6aedd5d2c" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>nminx</name></member>
-      <member refid="class_slab_s_l_1af072d42e03227a25d0a5034a85d6e77e" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>nminy</name></member>
-      <member refid="class_slab_s_l_1a7429986d460d82594e47a4ffda7a91c2" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>nnmax</name></member>
-      <member refid="class_pot_accel_1a4f2099b1b705731b909e63c90ea59f04" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>NoCoefs</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda7c49f38007dad33fb1e48fdebdd2f8c1" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>other</name></member>
-      <member refid="class_slab_s_l_1a218f2b58cceddc3f6e806abf2f398986" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>pack</name></member>
-      <member refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" prot="protected" virt="non-virtual"><scope>SlabSL</scope><name>play_back</name></member>
-      <member refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" prot="protected" virt="non-virtual"><scope>SlabSL</scope><name>play_cnew</name></member>
-      <member refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>PotAccel</name></member>
-      <member refid="class_pot_accel_1a5e257d38dbf5c3d9630906a96abf6915" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a37a3c348c0febbf70ff94949071c3beb" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb" prot="public" virt="virtual"><scope>SlabSL</scope><name>RegisterComponent</name></member>
-      <member refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" prot="protected" virt="non-virtual"><scope>SlabSL</scope><name>scale</name></member>
-      <member refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" prot="public" virt="virtual"><scope>SlabSL</scope><name>set_multistep_level</name></member>
-      <member refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>SetExternal</name></member>
-      <member refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" prot="public" virt="virtual"><scope>SlabSL</scope><name>setScale</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda0a1acd8c0d6e745fb0ae3e33e458a9b8" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>slab</name></member>
-      <member refid="class_slab_s_l_1abcc90c9b4986352c5ba1fc19bd07f47d" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>slabCoefs</name></member>
-      <member refid="class_slab_s_l_1a794cfa67733dd42c028a7f966c743218" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>SlabSL</name></member>
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-      <member refid="class_slab_s_l_1a90f47058bbda05bc7ad8771fa567b354" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>type</name></member>
-      <member refid="class_pot_accel_1a0355cfe43cdde5237f7be234e94de64b" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>unmatched</name></member>
-      <member refid="class_slab_s_l_1a240fe5a1f485bf015eacb51ac09c10d9" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>unpack</name></member>
-      <member refid="class_pot_accel_1acd32c6464b705469911df718114187b9" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>use</name></member>
-      <member refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" prot="protected" virt="non-virtual"><scope>SlabSL</scope><name>use_external</name></member>
-      <member refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" prot="protected" virt="non-virtual"><scope>SlabSL</scope><name>used</name></member>
-      <member refid="class_pot_accel_1ae2e0dbf849707704a3d42a1fa91ce060" prot="public" virt="non-virtual"><scope>SlabSL</scope><name>Used</name></member>
-      <member refid="class_slab_s_l_1a0657ce43ccefeb7b32ce5ef83d31f747" prot="protected" virt="non-virtual"><scope>SlabSL</scope><name>valid_keys</name></member>
-      <member refid="class_slab_s_l_1ae1bc4f4db8f0a8db04f594aa5c0ecff7" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>zfrc</name></member>
-      <member refid="class_slab_s_l_1aa755c07fffc17ecb46106348e26f135e" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>zmax</name></member>
-      <member refid="class_slab_s_l_1a2e3a20f13e1612d7dea594a118ef5d2e" prot="private" virt="non-virtual"><scope>SlabSL</scope><name>zpot</name></member>
-      <member refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" prot="public" virt="virtual"><scope>SlabSL</scope><name>~PotAccel</name></member>
-      <member refid="class_slab_s_l_1a7635145cb28d52b58c2863045ec0d410" prot="public" virt="virtual"><scope>SlabSL</scope><name>~SlabSL</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_soft_kernel.xml b/doxyxml/class_soft_kernel.xml
deleted file mode 100644
index e011b56..0000000
--- a/doxyxml/class_soft_kernel.xml
+++ /dev/null
@@ -1,99 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_soft_kernel" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>SoftKernel</compoundname>
-    <derivedcompoundref refid="class_plummer_soft" prot="public" virt="non-virtual">PlummerSoft</derivedcompoundref>
-    <derivedcompoundref refid="class_spline_soft" prot="public" virt="non-virtual">SplineSoft</derivedcompoundref>
-    <includes refid="_grav_kernel_8_h" local="no">GravKernel.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_soft_kernel_1af804c372222bc2622cc472c88ac59b61" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double SoftKernel::tol</definition>
-        <argsstring></argsstring>
-        <name>tol</name>
-        <qualifiedname>SoftKernel::tol</qualifiedname>
-        <initializer>= 1.0e-8</initializer>
-        <briefdescription>
-<para>Separations smaller than this value are considered to be the same particle. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/GravKernel.H" line="11" column="16" bodyfile="/home/weinberg/Projects/EXP/src/GravKernel.H" bodystart="11" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_soft_kernel_1afc1f982ae91e01ee09aff7d2d8e5a5c1" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>std::pair&lt; double, double &gt;</type>
-        <definition>virtual std::pair&lt; double, double &gt; SoftKernel::operator()</definition>
-        <argsstring>(double r, double eps)=0</argsstring>
-        <name>operator()</name>
-        <qualifiedname>SoftKernel::operator()</qualifiedname>
-        <reimplementedby refid="class_plummer_soft_1a32d77200041892a69f1224c98b242be7">operator()</reimplementedby>
-        <reimplementedby refid="class_spline_soft_1a9689cbc5a2af8fecb3e847673bc3040a">operator()</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>eps</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>This operator returns the fractional mass and gravitational potential inside of radius<parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>for softening</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>eps</parametername>
-</parameternamelist>
-<parameterdescription>
-<para></para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/GravKernel.H" line="15" column="21"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Abstract class for smoothing kernel. Derive all new kernels from this class. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>PlummerSoft</label>
-        <link refid="class_plummer_soft"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>SoftKernel</label>
-        <link refid="class_soft_kernel"/>
-      </node>
-      <node id="3">
-        <label>SplineSoft</label>
-        <link refid="class_spline_soft"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <location file="/home/weinberg/Projects/EXP/src/GravKernel.H" line="7" column="1" bodyfile="/home/weinberg/Projects/EXP/src/GravKernel.H" bodystart="8" bodyend="17"/>
-    <listofallmembers>
-      <member refid="class_soft_kernel_1afc1f982ae91e01ee09aff7d2d8e5a5c1" prot="public" virt="pure-virtual"><scope>SoftKernel</scope><name>operator()</name></member>
-      <member refid="class_soft_kernel_1af804c372222bc2622cc472c88ac59b61" prot="public" virt="non-virtual"><scope>SoftKernel</scope><name>tol</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_sph_s_l.xml b/doxyxml/class_sph_s_l.xml
deleted file mode 100644
index 357304d..0000000
--- a/doxyxml/class_sph_s_l.xml
+++ /dev/null
@@ -1,1437 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_sph_s_l" kind="class" language="C++" prot="public">
-    <compoundname>SphSL</compoundname>
-    <includes refid="_sph_s_l_8_h" local="no">SphSL.H</includes>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_sph_s_l_1a8bab3f49b8435b6dc775e56f0af89054" prot="private" static="no">
-        <type>Eigen::Matrix&lt; double, Eigen::Dynamic, Eigen::Dynamic, Eigen::ColMajor &gt;</type>
-        <definition>typedef Eigen::Matrix&lt;double, Eigen::Dynamic, Eigen::Dynamic, Eigen::ColMajor&gt; SphSL::EigenColMajor</definition>
-        <argsstring></argsstring>
-        <name>EigenColMajor</name>
-        <qualifiedname>SphSL::EigenColMajor</qualifiedname>
-        <briefdescription>
-<para>For coefficient writing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="58" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="58" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_sph_s_l_1a4c0055b5874cdaef33d778ace1805ea5" prot="private" static="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>using SphSL::matT =  std::vector&lt;Eigen::MatrixXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>matT</name>
-        <qualifiedname>SphSL::matT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="34" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
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-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>using SphSL::vecT =  std::vector&lt;Eigen::VectorXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>vecT</name>
-        <qualifiedname>SphSL::vecT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>const unsigned int</type>
-        <definition>const unsigned int SphSL::cmagic</definition>
-        <argsstring></argsstring>
-        <name>cmagic</name>
-        <qualifiedname>SphSL::cmagic</qualifiedname>
-        <initializer>= 0xc0a57a2</initializer>
-        <briefdescription>
-<para>Coefficient magic number. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_sph_s_l_1a78463bb857162b66ebc22d7476c6ba2b" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SphSL::coefs_defined</definition>
-        <argsstring></argsstring>
-        <name>coefs_defined</name>
-        <qualifiedname>SphSL::coefs_defined</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_sph_s_l_1a30744f045b72d41197971f26588cf73a" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SphSL::compute_covar</definition>
-        <argsstring></argsstring>
-        <name>compute_covar</name>
-        <qualifiedname>SphSL::compute_covar</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type><ref refid="class_sph_s_l_1a4c0055b5874cdaef33d778ace1805ea5" kindref="member">matT</ref></type>
-        <definition>matT SphSL::covar</definition>
-        <argsstring></argsstring>
-        <name>covar</name>
-        <qualifiedname>SphSL::covar</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <referencedby refid="class_sph_s_l_1a057b1e689049e1e87203bcefb8962a70" compoundref="_sph_s_l_8_h" startline="123" endline="123">retrieve_covar</referencedby>
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-      <memberdef kind="variable" id="class_sph_s_l_1ab6a104467e2eee94aed94037fd6d9256" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SphSL::curbin</definition>
-        <argsstring></argsstring>
-        <name>curbin</name>
-        <qualifiedname>SphSL::curbin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_sph_s_l_1a87bfdfe5179e2274b3eefc0023bf362a" prot="private" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::d2legs</definition>
-        <argsstring></argsstring>
-        <name>d2legs</name>
-        <qualifiedname>SphSL::d2legs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::dend</definition>
-        <argsstring></argsstring>
-        <name>dend</name>
-        <qualifiedname>SphSL::dend</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="23" column="34" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="23" bodyend="-1"/>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::dlegs</definition>
-        <argsstring></argsstring>
-        <name>dlegs</name>
-        <qualifiedname>SphSL::dlegs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::dpot</definition>
-        <argsstring></argsstring>
-        <name>dpot</name>
-        <qualifiedname>SphSL::dpot</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::dpt2</definition>
-        <argsstring></argsstring>
-        <name>dpt2</name>
-        <qualifiedname>SphSL::dpt2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::expcoef</definition>
-        <argsstring></argsstring>
-        <name>expcoef</name>
-        <qualifiedname>SphSL::expcoef</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="28" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="28" bodyend="-1"/>
-        <referencedby refid="class_sph_s_l_1a0aa7582a73c17d16ba25f8e860748dc9" compoundref="_sph_s_l_8_h" startline="105" endline="105">retrieve_coefs</referencedby>
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-      <memberdef kind="variable" id="class_sph_s_l_1a4ec7b43106f56c54f8fa19a47e5fb67f" prot="private" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::factorial</definition>
-        <argsstring></argsstring>
-        <name>factorial</name>
-        <qualifiedname>SphSL::factorial</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="27" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="27" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sph_s_l_1a8abf3dfbafd87bfc9c0f08b9a305bf5b" prot="private" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::legs</definition>
-        <argsstring></argsstring>
-        <name>legs</name>
-        <qualifiedname>SphSL::legs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="24" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="24" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sph_s_l_1abc22876a683448046156a54269e8bc73" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SphSL::lmax</definition>
-        <argsstring></argsstring>
-        <name>lmax</name>
-        <qualifiedname>SphSL::lmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="20" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="20" bodyend="-1"/>
-        <referencedby refid="class_sph_s_l_1a1af10e4a0d69d827f25fef84a36787f2" compoundref="_sph_s_l_8_h" startline="153" endline="153">getLmax</referencedby>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; SphSL::massB</definition>
-        <argsstring></argsstring>
-        <name>massB</name>
-        <qualifiedname>SphSL::massB</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="44" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="44" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sph_s_l_1a18b3cdc7761fe54afdbb9fafbc8432c2" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphSL::maxSNR</definition>
-        <argsstring></argsstring>
-        <name>maxSNR</name>
-        <qualifiedname>SphSL::maxSNR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type><ref refid="class_sph_s_l_1ab061fb52a395bc192430ddae492f6c5e" kindref="member">vecT</ref></type>
-        <definition>vecT SphSL::mean</definition>
-        <argsstring></argsstring>
-        <name>mean</name>
-        <qualifiedname>SphSL::mean</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <definition>std::vector&lt;vecT&gt; SphSL::meanB</definition>
-        <argsstring></argsstring>
-        <name>meanB</name>
-        <qualifiedname>SphSL::meanB</qualifiedname>
-        <briefdescription>
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-        <definition>double SphSL::minSNR</definition>
-        <argsstring></argsstring>
-        <name>minSNR</name>
-        <qualifiedname>SphSL::minSNR</qualifiedname>
-        <briefdescription>
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-        <name>nmax</name>
-        <qualifiedname>SphSL::nmax</qualifiedname>
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-        <name>npart</name>
-        <qualifiedname>SphSL::npart</qualifiedname>
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-        <definition>Eigen::MatrixXd SphSL::potd</definition>
-        <argsstring></argsstring>
-        <name>potd</name>
-        <qualifiedname>SphSL::potd</qualifiedname>
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-        <name>rmax</name>
-        <qualifiedname>SphSL::rmax</qualifiedname>
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-        <name>rmin</name>
-        <qualifiedname>SphSL::rmin</qualifiedname>
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-        <name>sl</name>
-        <qualifiedname>SphSL::sl</qualifiedname>
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-        <type><ref refid="class_sph_s_l_1ab061fb52a395bc192430ddae492f6c5e" kindref="member">vecT</ref></type>
-        <definition>vecT SphSL::svar</definition>
-        <argsstring></argsstring>
-        <name>svar</name>
-        <qualifiedname>SphSL::svar</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="variable" id="class_sph_s_l_1a0e213fdbc73023e17600f40f5337a04d" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphSL::totalMass</definition>
-        <argsstring></argsstring>
-        <name>totalMass</name>
-        <qualifiedname>SphSL::totalMass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="41" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="41" bodyend="-1"/>
-        <referencedby refid="class_sph_s_l_1a17812bffe550498ed83972cad844a308" compoundref="_sph_s_l_8_h" startline="114" endline="114">getMass</referencedby>
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-      <memberdef kind="variable" id="class_sph_s_l_1a6b9d4c1067f35ba9473f68495a620b1a" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SphSL::used</definition>
-        <argsstring></argsstring>
-        <name>used</name>
-        <qualifiedname>SphSL::used</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type><ref refid="class_sph_s_l_1a4c0055b5874cdaef33d778ace1805ea5" kindref="member">matT</ref></type>
-        <definition>matT SphSL::uvec</definition>
-        <argsstring></argsstring>
-        <name>uvec</name>
-        <qualifiedname>SphSL::uvec</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="40" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="40" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sph_s_l_1ad2a1e490eea1a7ace6a4164d92c8b934" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SphSL::work</definition>
-        <argsstring></argsstring>
-        <name>work</name>
-        <qualifiedname>SphSL::work</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="49" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="49" bodyend="-1"/>
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-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_sph_s_l_1a122af0e8ffe78ea0fdb1a0892fa14d21" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double SphSL::HEXP</definition>
-        <argsstring></argsstring>
-        <name>HEXP</name>
-        <qualifiedname>SphSL::HEXP</qualifiedname>
-        <briefdescription>
-<para>Hall exponent (default: 1) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="72" column="17" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="72" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sph_s_l_1a67986223672bb1114d69afe782c5da95" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool SphSL::mpi</definition>
-        <argsstring></argsstring>
-        <name>mpi</name>
-        <qualifiedname>SphSL::mpi</qualifiedname>
-        <briefdescription>
-<para>Use MPI? (default: false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="69" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="69" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sph_s_l_1a5341da43cd684f8d4bc2ac8dbd79b946" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int SphSL::NEV</definition>
-        <argsstring></argsstring>
-        <name>NEV</name>
-        <qualifiedname>SphSL::NEV</qualifiedname>
-        <briefdescription>
-<para>Number of eigenfunctions for each subspace for PNG figure. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="63" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="63" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sph_s_l_1a0befac0479ce8dfb2c082f03165dbd56" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int SphSL::NUMR</definition>
-        <argsstring></argsstring>
-        <name>NUMR</name>
-        <qualifiedname>SphSL::NUMR</qualifiedname>
-        <briefdescription>
-<para>Number of radial points in table (default: 800) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="66" column="14" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="66" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void SphSL::bomb</definition>
-        <argsstring>(char *s)</argsstring>
-        <name>bomb</name>
-        <qualifiedname>SphSL::bomb</qualifiedname>
-        <param>
-          <type>char *</type>
-          <declname>s</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="51" column="8"/>
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-        <type>void</type>
-        <definition>void SphSL::accumulate</definition>
-        <argsstring>(double x, double y, double z, double mass)</argsstring>
-        <name>accumulate</name>
-        <qualifiedname>SphSL::accumulate</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <briefdescription>
-<para>Accumulate new coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="133" column="8"/>
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-        <type>void</type>
-        <definition>void SphSL::all_eval</definition>
-        <argsstring>(double r, double costh, double phi, double &amp;den0, double &amp;den1, double &amp;pot0, double &amp;pot1, double &amp;potr, double &amp;pott, double &amp;potp, int L1=0, int L2=10000, int N1=0, int N2=10000)</argsstring>
-        <name>all_eval</name>
-        <qualifiedname>SphSL::all_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>costh</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>den0</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>den1</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>pot0</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>pot1</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>potr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>pott</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>potp</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>L1</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>L2</declname>
-          <defval>10000</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N1</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N2</declname>
-          <defval>10000</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="146" column="8"/>
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-      <memberdef kind="function" id="class_sph_s_l_1a87c1d60465a1d18ffa2665b05fedae3d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::shared_ptr&lt; <ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref> &gt;</type>
-        <definition>std::shared_ptr&lt; SLGridSph &gt; SphSL::basis</definition>
-        <argsstring>(void)</argsstring>
-        <name>basis</name>
-        <qualifiedname>SphSL::basis</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Access to basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="166" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="166" bodyend="166"/>
-        <references refid="class_sph_s_l_1a646da787ac7598df4c4faeea9c882e72" compoundref="_sph_s_l_8_h" startline="19">sl</references>
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-        <type>void</type>
-        <definition>void SphSL::dens_pot_eval</definition>
-        <argsstring>(double r, double costh, double phi, double &amp;dens0, double &amp;dens, double &amp;potl0, double &amp;potl, int L1=0, int L2=10000, int N1=0, int N2=10000)</argsstring>
-        <name>dens_pot_eval</name>
-        <qualifiedname>SphSL::dens_pot_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>costh</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dens0</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dens</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>potl0</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>potl</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>L1</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>L2</declname>
-          <defval>10000</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N1</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N2</declname>
-          <defval>10000</defval>
-        </param>
-        <briefdescription>
-<para>Evaluate potential and density. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="136" column="8"/>
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-        <type>void</type>
-        <definition>void SphSL::dump_coefs</definition>
-        <argsstring>(double time, std::ostream &amp;out)</argsstring>
-        <name>dump_coefs</name>
-        <qualifiedname>SphSL::dump_coefs</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>time</declname>
-        </param>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <briefdescription>
-<para>Dump coefficients using the standard header. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="169" column="8"/>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::get_pot</definition>
-        <argsstring>(double x)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SphSL::get_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Retrieve potential. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="126" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="126" bodyend="126"/>
-        <references refid="class_sph_s_l_1a8a72b80960d628509aea5ead8d5bb5eb" compoundref="_sph_s_l_8_h" startline="23">potd</references>
-        <references refid="class_sph_s_l_1a646da787ac7598df4c4faeea9c882e72" compoundref="_sph_s_l_8_h" startline="19">sl</references>
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-        <type>double</type>
-        <definition>double SphSL::get_power</definition>
-        <argsstring>(double snr, double mass)</argsstring>
-        <name>get_power</name>
-        <qualifiedname>SphSL::get_power</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>snr</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <briefdescription>
-<para>Get fractional power in trimmed coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="120" column="10"/>
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-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::get_trimmed</definition>
-        <argsstring>(double snr, double mass, bool Hall=false)</argsstring>
-        <name>get_trimmed</name>
-        <qualifiedname>SphSL::get_trimmed</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>snr</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>mass</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>Hall</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Retrieve coefficients with SNR trim. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>int</type>
-        <definition>int SphSL::getLmax</definition>
-        <argsstring>()</argsstring>
-        <name>getLmax</name>
-        <qualifiedname>SphSL::getLmax</qualifiedname>
-        <briefdescription>
-<para>Return current maximum harmonic order in expansion. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_sph_s_l_1abc22876a683448046156a54269e8bc73" compoundref="_sph_s_l_8_h" startline="20">lmax</references>
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-        <type>double</type>
-        <definition>double SphSL::getMass</definition>
-        <argsstring>(void)</argsstring>
-        <name>getMass</name>
-        <qualifiedname>SphSL::getMass</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Get mass on grid. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_sph_s_l_1a0e213fdbc73023e17600f40f5337a04d" compoundref="_sph_s_l_8_h" startline="41">totalMass</references>
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-      <memberdef kind="function" id="class_sph_s_l_1a140d9cf383f197b5e79ef6a3335303ee" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphSL::getMaxSNR</definition>
-        <argsstring>(void)</argsstring>
-        <name>getMaxSNR</name>
-        <qualifiedname>SphSL::getMaxSNR</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Maximum SNR coefficient value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="class_sph_s_l_1a18b3cdc7761fe54afdbb9fafbc8432c2" compoundref="_sph_s_l_8_h" startline="47">maxSNR</references>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a3a07394c4dd0445d597db2dd6d46b88a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphSL::getMinSNR</definition>
-        <argsstring>(void)</argsstring>
-        <name>getMinSNR</name>
-        <qualifiedname>SphSL::getMinSNR</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Minimum SNR coefficient value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="108" column="10" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="108" bodyend="108"/>
-        <references refid="class_sph_s_l_1a48df205c40b2338b96208f0ec93e8a03" compoundref="_sph_s_l_8_h" startline="47">minSNR</references>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a2421f46e29dc076412c8294c2f96ae5a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int SphSL::getNmax</definition>
-        <argsstring>()</argsstring>
-        <name>getNmax</name>
-        <qualifiedname>SphSL::getNmax</qualifiedname>
-        <briefdescription>
-<para>Return current maximum order in radial expansion. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="156" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="156" bodyend="156"/>
-        <references refid="class_sph_s_l_1a05d4ce6810932347899461c845e985c9" compoundref="_sph_s_l_8_h" startline="20">nmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a68903756b0a162ba408129701b3823b8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::install_coefs</definition>
-        <argsstring>(Eigen::MatrixXd &amp;newcoef)</argsstring>
-        <name>install_coefs</name>
-        <qualifiedname>SphSL::install_coefs</qualifiedname>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>newcoef</declname>
-        </param>
-        <briefdescription>
-<para>Install coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="102" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a3705afbc885f51e099f865fc0dd4e859" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::legendre_R</definition>
-        <argsstring>(int lmax, double x, Eigen::MatrixXd &amp;p)</argsstring>
-        <name>legendre_R</name>
-        <qualifiedname>SphSL::legendre_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="159" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a5fb28740b25c0cba8e6244bd51da0ba3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::legendre_R</definition>
-        <argsstring>(int lmax, double x, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dp)</argsstring>
-        <name>legendre_R</name>
-        <qualifiedname>SphSL::legendre_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="160" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1abc4dea9519450ac243bbcf0dce9b11cb" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::legendre_R</definition>
-        <argsstring>(int lmax, double x, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dp, Eigen::MatrixXd &amp;d2p)</argsstring>
-        <name>legendre_R</name>
-        <qualifiedname>SphSL::legendre_R</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d2p</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="161" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a6454c41a1d59f53ba6b6c77f4e08930a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::make_coefs</definition>
-        <argsstring>(void)</argsstring>
-        <name>make_coefs</name>
-        <qualifiedname>SphSL::make_coefs</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Make coefficients after accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="96" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a0be9194b63b9e0a0864306231973bcab" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::make_covar</definition>
-        <argsstring>(bool verbose=false)</argsstring>
-        <name>make_covar</name>
-        <qualifiedname>SphSL::make_covar</qualifiedname>
-        <param>
-          <type>bool</type>
-          <declname>verbose</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Covariance analysis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="99" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a071751f784e4cbb08cbe63885e7c4564" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::pot_force_eval</definition>
-        <argsstring>(double r, double costh, double phi, double &amp;potl, double &amp;potr, double &amp;pott, double &amp;potp, int L1=0, int L2=10000, int N1=0, int N2=10000)</argsstring>
-        <name>pot_force_eval</name>
-        <qualifiedname>SphSL::pot_force_eval</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>costh</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>potl</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>potr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>pott</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>potp</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>L1</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>L2</declname>
-          <defval>10000</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N1</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>N2</declname>
-          <defval>10000</defval>
-        </param>
-        <briefdescription>
-<para>Evaluate potential and force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="142" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a78fa63af82f500d5beb58b700cc5f477" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::reset_coefs</definition>
-        <argsstring>(void)</argsstring>
-        <name>reset_coefs</name>
-        <qualifiedname>SphSL::reset_coefs</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Zero out coefficients to prepare for a new expansion. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="93" column="8"/>
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-      <memberdef kind="function" id="class_sph_s_l_1a0aa7582a73c17d16ba25f8e860748dc9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphSL::retrieve_coefs</definition>
-        <argsstring>(void)</argsstring>
-        <name>retrieve_coefs</name>
-        <qualifiedname>SphSL::retrieve_coefs</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Retrieve coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="105" column="19" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="105" bodyend="105"/>
-        <references refid="class_sph_s_l_1a04d70545f5f2c8e1865fba292a4c3bdf" compoundref="_sph_s_l_8_h" startline="28">expcoef</references>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1a057b1e689049e1e87203bcefb8962a70" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt; Eigen::MatrixXd &gt; SphSL::retrieve_covar</definition>
-        <argsstring>(void)</argsstring>
-        <name>retrieve_covar</name>
-        <qualifiedname>SphSL::retrieve_covar</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Retrieve coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="123" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="123" bodyend="123"/>
-        <references refid="class_sph_s_l_1add31a346d78f04aa42f8193359a71d3d" compoundref="_sph_s_l_8_h" startline="37">covar</references>
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-      <memberdef kind="function" id="class_sph_s_l_1ad14bfbb766ace476d4211ad8caab176e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphSL::set_scale</definition>
-        <argsstring>(const double scl)</argsstring>
-        <name>set_scale</name>
-        <qualifiedname>SphSL::set_scale</qualifiedname>
-        <param>
-          <type>const double</type>
-          <declname>scl</declname>
-        </param>
-        <briefdescription>
-<para>Prescaling factor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="90" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="90" bodyend="90"/>
-        <references refid="class_sph_s_l_1ad36aa73535e8c1d427d1129d2f96b006" compoundref="_sph_s_l_8_h" startline="29">rscl</references>
-      </memberdef>
-      <memberdef kind="function" id="class_sph_s_l_1ac660e765c2fb2132756ff99d28b8764a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>SphSL::SphSL</definition>
-        <argsstring>(std::shared_ptr&lt; SphericalModelTable &gt; mod, int LMAX, int NMAX, int CMAP=0, double SCALE=0.067, bool COVAR=false, int NPART=0)</argsstring>
-        <name>SphSL</name>
-        <qualifiedname>SphSL::SphSL</qualifiedname>
-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref> &gt;</type>
-          <declname>mod</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>LMAX</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>NMAX</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>CMAP</declname>
-          <defval>0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>SCALE</declname>
-          <defval>0.067</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>COVAR</declname>
-          <defval>false</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>NPART</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>mod</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>instance of <ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref> to condition eigenfunctions </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>LMAX</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>NMAX</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>CMAP</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the <ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref> coordindate mapping type </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>SCALE</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the <ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref> coordindate scale length </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>COVAR</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>true will evaluate the covariance matrix for coeffficients </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>NPART</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>&gt;0 will evaluate the covariance matrix using a jackknife partition with number given </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="83" column="3"/>
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-        <type></type>
-        <definition>SphSL::~SphSL</definition>
-        <argsstring>(void)</argsstring>
-        <name>~SphSL</name>
-        <qualifiedname>SphSL::~SphSL</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Uses <ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref> basis to evaluate expansion coeffients and provide potential and density basis fields </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" line="14" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/SphSL.H" bodystart="15" bodyend="171"/>
-    <listofallmembers>
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-      <member refid="class_sph_s_l_1aa274dd1580e64807ea77d08661b4f272" prot="private" virt="non-virtual"><scope>SphSL</scope><name>bomb</name></member>
-      <member refid="class_sph_s_l_1a930da1da9375b59ba66d77f6744e22c7" prot="private" virt="non-virtual"><scope>SphSL</scope><name>cmagic</name></member>
-      <member refid="class_sph_s_l_1a78463bb857162b66ebc22d7476c6ba2b" prot="private" virt="non-virtual"><scope>SphSL</scope><name>coefs_defined</name></member>
-      <member refid="class_sph_s_l_1a30744f045b72d41197971f26588cf73a" prot="private" virt="non-virtual"><scope>SphSL</scope><name>compute_covar</name></member>
-      <member refid="class_sph_s_l_1add31a346d78f04aa42f8193359a71d3d" prot="private" virt="non-virtual"><scope>SphSL</scope><name>covar</name></member>
-      <member refid="class_sph_s_l_1ab6a104467e2eee94aed94037fd6d9256" prot="private" virt="non-virtual"><scope>SphSL</scope><name>curbin</name></member>
-      <member refid="class_sph_s_l_1a87bfdfe5179e2274b3eefc0023bf362a" prot="private" virt="non-virtual"><scope>SphSL</scope><name>d2legs</name></member>
-      <member refid="class_sph_s_l_1a7c888d9035d66d0952f5f916e529aa94" prot="private" virt="non-virtual"><scope>SphSL</scope><name>dend</name></member>
-      <member refid="class_sph_s_l_1a382d88ecd625ea72257d1a822ce405cb" prot="public" virt="non-virtual"><scope>SphSL</scope><name>dens_pot_eval</name></member>
-      <member refid="class_sph_s_l_1a501c85f6c8e807f525ddd048fbf2f846" prot="private" virt="non-virtual"><scope>SphSL</scope><name>dlegs</name></member>
-      <member refid="class_sph_s_l_1aaa36e6af43205045b09a4f0aaba2e9d3" prot="private" virt="non-virtual"><scope>SphSL</scope><name>dpot</name></member>
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diff --git a/doxyxml/class_sphere.xml b/doxyxml/class_sphere.xml
deleted file mode 100644
index b847d2d..0000000
--- a/doxyxml/class_sphere.xml
+++ /dev/null
@@ -1,1376 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_sphere" kind="class" language="C++" prot="public">
-    <compoundname>Sphere</compoundname>
-    <basecompoundref refid="class_spherical_basis" prot="public" virt="non-virtual">SphericalBasis</basecompoundref>
-    <includes refid="_sphere_8_h" local="no">Sphere.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_sphere_1a4be924f21c7dc76a1ebc008da7ab3035" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string Sphere::cache_file</definition>
-        <argsstring></argsstring>
-        <name>cache_file</name>
-        <qualifiedname>Sphere::cache_file</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="100" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="100" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1a624cdbd8af6d8239e0d51c551cdaa2c3" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Sphere::cmap</definition>
-        <argsstring></argsstring>
-        <name>cmap</name>
-        <qualifiedname>Sphere::cmap</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="96" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="96" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1a368d1dbf2eb3b9cc269cfb2a6aa12fa4" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Sphere::dfac</definition>
-        <argsstring></argsstring>
-        <name>dfac</name>
-        <qualifiedname>Sphere::dfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="98" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="98" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1aff508dfdf616fedad98c3c1afceb7a5f" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Sphere::diverge</definition>
-        <argsstring></argsstring>
-        <name>diverge</name>
-        <qualifiedname>Sphere::diverge</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="97" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="97" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1abb1ec3fb8249f1baad4ac0a371140865" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double Sphere::dtime</definition>
-        <argsstring></argsstring>
-        <name>dtime</name>
-        <qualifiedname>Sphere::dtime</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="92" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="92" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1ac3492a52339889ef2ce0357bdbc5ecc9" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Sphere::logr</definition>
-        <argsstring></argsstring>
-        <name>logr</name>
-        <qualifiedname>Sphere::logr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="103" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="103" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1a5fe02164759ca90df854c1fced09444d" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string Sphere::model_file</definition>
-        <argsstring></argsstring>
-        <name>model_file</name>
-        <qualifiedname>Sphere::model_file</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="99" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="99" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1a2a4d4939bbd407cf72138097de9f15df" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Sphere::noff</definition>
-        <argsstring></argsstring>
-        <name>noff</name>
-        <qualifiedname>Sphere::noff</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="95" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="95" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1adb0b2bc43a2ee2dc14c2da9ee8fd5aa2" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int Sphere::numr</definition>
-        <argsstring></argsstring>
-        <name>numr</name>
-        <qualifiedname>Sphere::numr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="93" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="93" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sphere_1a04f2b8606239e7b2a49a22efc4978a1a" prot="private" static="no" mutable="no">
-        <type>int</type>
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-        <argsstring></argsstring>
-        <name>nums</name>
-        <qualifiedname>Sphere::nums</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="94" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="94" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" prot="private" static="no" mutable="no">
-        <type><ref refid="_sphere_8_h_1ae7aad8a2e9c295a94ae01ec5ec2f35b8" kindref="member">SLGridSphPtr</ref></type>
-        <definition>SLGridSphPtr Sphere::ortho</definition>
-        <argsstring></argsstring>
-        <name>ortho</name>
-        <qualifiedname>Sphere::ortho</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="52" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="52" bodyend="-1"/>
-        <referencedby refid="class_sphere_1a5f0f6e819b476dfa29d1dad5b267a14a" compoundref="_sphere_8_h" startline="112" endline="112">d_r_to_xi</referencedby>
-        <referencedby refid="class_sphere_1a2c3b6d03a4ba8aa60b2eff871ead655b" compoundref="_sphere_8_h" startline="113" endline="113">d_xi_to_r</referencedby>
-        <referencedby refid="class_sphere_1a60b2648f82fede09d60f0bc36bc4cd96" compoundref="_sphere_8_h" startline="110" endline="110">r_to_xi</referencedby>
-        <referencedby refid="class_sphere_1a6699301c6969c5499ddf669f7f4fbffc" compoundref="_sphere_8_h" startline="111" endline="111">xi_to_r</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_1a89f73c9ad44a2eb0522626631034e052" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool Sphere::plummer</definition>
-        <argsstring></argsstring>
-        <name>plummer</name>
-        <qualifiedname>Sphere::plummer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="102" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="102" bodyend="-1"/>
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-        <qualifiedname>Sphere::recompute</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="101" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="101" bodyend="-1"/>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>rmap</name>
-        <qualifiedname>Sphere::rmap</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="91" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="91" bodyend="-1"/>
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-        <argsstring></argsstring>
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-        <qualifiedname>Sphere::rsphSL</qualifiedname>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="90" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="90" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>tnext</name>
-        <qualifiedname>Sphere::tnext</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="92" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="92" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sphere_1a69e5f2cb1fe98554c8ed7b1b9ed28f79" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; Sphere::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>Sphere::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="106" column="25" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="106" bodyend="-1"/>
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-      <memberdef kind="function" id="class_sphere_1a5f0f6e819b476dfa29d1dad5b267a14a" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Sphere::d_r_to_xi</definition>
-        <argsstring>(double r)</argsstring>
-        <name>d_r_to_xi</name>
-        <qualifiedname>Sphere::d_r_to_xi</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a8371f1f235cbd49dbf0bd89541d8fdaf">d_r_to_xi</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="112" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="112" bodyend="112"/>
-        <references refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" compoundref="_sphere_8_h" startline="52">ortho</references>
-        <references refid="class_sphere_1a60b2648f82fede09d60f0bc36bc4cd96" compoundref="_sphere_8_h" startline="110" endline="110">r_to_xi</references>
-      </memberdef>
-      <memberdef kind="function" id="class_sphere_1a2c3b6d03a4ba8aa60b2eff871ead655b" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double Sphere::d_xi_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>d_xi_to_r</name>
-        <qualifiedname>Sphere::d_xi_to_r</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="113" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="113" bodyend="113"/>
-        <references refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" compoundref="_sphere_8_h" startline="52">ortho</references>
-      </memberdef>
-      <memberdef kind="function" id="class_sphere_1ac5738f6eed896da5c7c53d463decdf00" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Sphere::get_dens</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>Sphere::get_dens</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a0e2377c1cdc1335562343e01e4dee7cd">get_dens</reimplements>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="84" column="8"/>
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-      <memberdef kind="function" id="class_sphere_1a8c6a7bce9e2621c37ae76e1f863fa80c" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Sphere::get_dpotl</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dp, int tid)</argsstring>
-        <name>get_dpotl</name>
-        <qualifiedname>Sphere::get_dpotl</qualifiedname>
-        <reimplements refid="class_spherical_basis_1ac3eafe5175c669b7b7b86932c764af32">get_dpotl</reimplements>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="56" column="8"/>
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-      <memberdef kind="function" id="class_sphere_1a652173e111f6605982c6adbc65f32293" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void Sphere::get_potl</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, int tid)</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>Sphere::get_potl</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a63cdde991a10a6309a97e3af6b5833b3">get_potl</reimplements>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="58" column="8"/>
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-        <type>void</type>
-        <definition>void Sphere::get_potl_dens</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;d, int tid)</argsstring>
-        <name>get_potl_dens</name>
-        <qualifiedname>Sphere::get_potl_dens</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a2823c30f130d1a33768cce788b05c34e">get_potl_dens</reimplements>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="86" column="8"/>
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-        <type>void</type>
-        <definition>void Sphere::initialize</definition>
-        <argsstring>(void)</argsstring>
-        <name>initialize</name>
-        <qualifiedname>Sphere::initialize</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a33f78daf1c5dcf5ac4d327662963b1a5">initialize</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Initialize method. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="54" column="8"/>
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-        <type>void</type>
-        <definition>void Sphere::make_model</definition>
-        <argsstring>()</argsstring>
-        <name>make_model</name>
-        <qualifiedname>Sphere::make_model</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="63" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="63" bodyend="66"/>
-        <references refid="class_sphere_1a21810f9c6a9dd31ec9b119e6bccfc453">make_model_bin</references>
-        <references refid="class_sphere_1ab444f846661c7e7113ca1cf21f0cc4ce">make_model_plummer</references>
-        <references refid="class_sphere_1a89f73c9ad44a2eb0522626631034e052" compoundref="_sphere_8_h" startline="102">plummer</references>
-        <referencedby refid="class_sphere_1a6d9c19cd5b655fb7e47fdbb680fe3e25" compoundref="_sphere_8_h" startline="139" endline="143">determine_coefficients</referencedby>
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-        <type>void</type>
-        <definition>void Sphere::make_model_bin</definition>
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-        <name>make_model_bin</name>
-        <qualifiedname>Sphere::make_model_bin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="68" column="8"/>
-        <referencedby refid="class_sphere_1a08f150878ea2e0a03f1417eb07e90c8d" compoundref="_sphere_8_h" startline="63" endline="66">make_model</referencedby>
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-        <type>void</type>
-        <definition>void Sphere::make_model_plummer</definition>
-        <argsstring>()</argsstring>
-        <name>make_model_plummer</name>
-        <qualifiedname>Sphere::make_model_plummer</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="69" column="8"/>
-        <referencedby refid="class_sphere_1a08f150878ea2e0a03f1417eb07e90c8d" compoundref="_sphere_8_h" startline="63" endline="66">make_model</referencedby>
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-        <type>double</type>
-        <definition>double Sphere::mapDeriv</definition>
-        <argsstring>(const std::map&lt; double, double &gt; &amp;data, double x)</argsstring>
-        <name>mapDeriv</name>
-        <qualifiedname>Sphere::mapDeriv</qualifiedname>
-        <param>
-          <type>const std::map&lt; double, double &gt; &amp;</type>
-          <declname>data</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="61" column="10"/>
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-        <type>double</type>
-        <definition>double Sphere::mapIntrp</definition>
-        <argsstring>(const std::map&lt; double, double &gt; &amp;data, double x)</argsstring>
-        <name>mapIntrp</name>
-        <qualifiedname>Sphere::mapIntrp</qualifiedname>
-        <param>
-          <type>const std::map&lt; double, double &gt; &amp;</type>
-          <declname>data</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="60" column="10"/>
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-      <memberdef kind="function" id="class_sphere_1a60b2648f82fede09d60f0bc36bc4cd96" prot="private" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Sphere::r_to_xi</definition>
-        <argsstring>(double r)</argsstring>
-        <name>r_to_xi</name>
-        <qualifiedname>Sphere::r_to_xi</qualifiedname>
-        <reimplements refid="class_spherical_basis_1ad1b2e558ad5f084a43d5368e86910763">r_to_xi</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Coordinate mapping. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="110" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="110" bodyend="110"/>
-        <references refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" compoundref="_sphere_8_h" startline="52">ortho</references>
-        <referencedby refid="class_sphere_1a5f0f6e819b476dfa29d1dad5b267a14a" compoundref="_sphere_8_h" startline="112" endline="112">d_r_to_xi</referencedby>
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-        <type>double</type>
-        <definition>double Sphere::xi_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>xi_to_r</name>
-        <qualifiedname>Sphere::xi_to_r</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a84edfe45c66d8221046d65aa63d19f8a">xi_to_r</reimplements>
-        <param>
-          <type>double</type>
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-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="111" column="10" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="111" bodyend="111"/>
-        <references refid="class_sphere_1a5ed1ee6094cdc1a966ee425b9df9db81" compoundref="_sphere_8_h" startline="52">ortho</references>
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-    <sectiondef kind="public-func">
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-        <type>void</type>
-        <definition>virtual void Sphere::determine_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>Sphere::determine_coefficients</qualifiedname>
-        <reimplements refid="class_spherical_basis_1a91e8b02d7a7482ba2dd12cbae311533c">determine_coefficients</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Override to redetermine basis, as desired. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="139" column="16" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="139" bodyend="143"/>
-        <references refid="class_spherical_basis_1a91e8b02d7a7482ba2dd12cbae311533c">SphericalBasis::determine_coefficients</references>
-        <references refid="class_sphere_1a08f150878ea2e0a03f1417eb07e90c8d" compoundref="_sphere_8_h" startline="63" endline="66">make_model</references>
-        <references refid="class_sphere_1a28294bdd15c2bc06642281e4d2113983" compoundref="_sphere_8_h" startline="101">recompute</references>
-        <references refid="class_sphere_1a598ccc4dc3fe0818aedba36666be68d8" compoundref="_sphere_8_h" startline="92">tnext</references>
-        <references refid="global_8_h_1aee2e12c455ac1712da2b8c5a7eadb147">tnow</references>
-      </memberdef>
-      <memberdef kind="function" id="class_sphere_1aa23162c4c21959d46257a150931e2f56" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Sphere::Sphere</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf, MixtureBasis *m=0)</argsstring>
-        <name>Sphere</name>
-        <qualifiedname>Sphere::Sphere</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <param>
-          <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-          <declname>m</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (<ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>conf</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>passes any parameters to basis instance (rsphSL, rmin and numr </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>m</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>allows the spherical basis to be used for multiple center expansions</para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-Input line parameters include: <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>rmapping</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the radius for coordinate scaling </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of radial grid points </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmap</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true for scaling coordinates from the semi-infinite to finite segment </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>diverge</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to true means assume a cuspy profile </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dfac</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the power of the &quot;divergent&quot; cusp </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>modelname</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the file containing the input background model profile </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cachename</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name for the SL grid cache file </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dtime</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the interval between basis recomputations (&lt;=0 for never) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="133" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sphere_1acde2697064cbc2c64ea34aed1b3efac7" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual Sphere::~Sphere</definition>
-        <argsstring>()</argsstring>
-        <name>~Sphere</name>
-        <qualifiedname>Sphere::~Sphere</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="136" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Computes the potential, acceleration and density using the Sturm Liouville direct solution</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>rmin</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the minimum value in the table for the radial basis functions (default is 0.001)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rmapping</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the halo scale length (default is 0.067*rmax). This is used to for the coordinate mapping (see below).</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cmap</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>should be 1 for algebraic coordinate scaling, 2 for log coordinate scaling, 0 for no scaling as follows:  <formula id="95">\[ 
-x = {r/r_s-1 \over r/r_s+1} 
-\]</formula> when <computeroutput>cmap=1</computeroutput> and  <formula id="96">\[
-x =  \log(r)
-\]</formula> when <computeroutput>cmap=2</computeroutput>. Algebraic coordinate scaling is a good general choice. For spherical models with a very large dynamic range (e.g. deep, cuspy halos), logarithmic scaling will be a better choice. <ref refid="class_logarithmic" kindref="compound">Logarithmic</ref> scaling will insist that the <computeroutput>rmin&gt;0</computeroutput>.</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>numr</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number radial coordinate knots in the table (default is 1000)</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>diverge</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>sets the power law extrapolation of a cusp profile</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dfac</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the inverse slope of the power law </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="3">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="1">
-        <label>Sphere</label>
-        <link refid="class_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>SphericalBasis</label>
-        <link refid="class_spherical_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="3">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="10" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="9">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="11">
-        <label>MixtureBasis</label>
-        <link refid="class_mixture_basis"/>
-        <childnode refid="12" relation="usage">
-          <edgelabel>p</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="9" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>Sphere</label>
-        <link refid="class_sphere"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>SphericalBasis</label>
-        <link refid="class_spherical_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-        <childnode refid="11" relation="usage">
-          <edgelabel>mix</edgelabel>
-        </childnode>
-      </node>
-      <node id="10">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="12">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="5" relation="public-inheritance">
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>exp_in</edgelabel>
-          <edgelabel>exp_out</edgelabel>
-        </childnode>
-        <childnode refid="11" relation="usage">
-          <edgelabel>mix_in</edgelabel>
-          <edgelabel>mix_out</edgelabel>
-        </childnode>
-      </node>
-      <node id="6">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/Sphere.H" line="47" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Sphere.H" bodystart="48" bodyend="145"/>
-    <listofallmembers>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>Sphere</scope><name>atol</name></member>
-      <member refid="class_axisymmetric_basis_1ab965e325410d79d567903f51dd2c6dd0" prot="public" virt="non-virtual"><scope>Sphere</scope><name>AxisymmetricBasis</name></member>
-      <member refid="class_axisymmetric_basis_1aa4fc18ccf44bdf56ac60b7caa68b1cfc" prot="private" virt="non-virtual"><scope>Sphere</scope><name>b_Hall</name></member>
-      <member refid="class_basis_1a3deeb360a898d1c144f7f6ad44813b3e" prot="public" virt="non-virtual"><scope>Sphere</scope><name>Basis</name></member>
-      <member refid="class_spherical_basis_1a1066050b6ba526768710115eced4144f" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>biorthogonality_check</name></member>
-      <member refid="class_sphere_1a4be924f21c7dc76a1ebc008da7ab3035" prot="private" virt="non-virtual"><scope>Sphere</scope><name>cache_file</name></member>
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-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>Sphere</scope><name>cc_lock</name></member>
-      <member refid="class_spherical_basis_1a1fb812ef3e4559b795aa1407ceaa6079" prot="protected" virt="virtual"><scope>Sphere</scope><name>check_range</name></member>
-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>Sphere</scope><name>ClearExternal</name></member>
-      <member refid="class_spherical_basis_1aac8c95f365acb42630d38d2b8a2c79f4" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>cmagic</name></member>
-      <member refid="class_sphere_1a624cdbd8af6d8239e0d51c551cdaa2c3" prot="private" virt="non-virtual"><scope>Sphere</scope><name>cmap</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>coef_dump</name></member>
-      <member refid="class_spherical_basis_1a27cb5e14065b26a1eaf8fecde6210db9" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>coefMaster</name></member>
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-      <member refid="class_spherical_basis_1ac6b350512a9ae518f4c8cbecb4a46593" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>compute_multistep_coefficients</name></member>
-      <member refid="class_spherical_basis_1ac6d657e39329e543766a4503f25d3a37" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>compute_rms_coefs</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>conf</name></member>
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-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>cuda_aware</name></member>
-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>Sphere</scope><name>cudaAware</name></member>
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-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>current_keys</name></member>
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-      <member refid="class_sphere_1a69e5f2cb1fe98554c8ed7b1b9ed28f79" prot="private" virt="non-virtual"><scope>Sphere</scope><name>valid_keys</name></member>
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-      <member refid="class_axisymmetric_basis_1ab0d1d51da0dc7f33cf3091bab41866d1" prot="protected" virt="non-virtual"><scope>Sphere</scope><name>vtkfreq</name></member>
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-</doxygen>
diff --git a/doxyxml/class_sphere_s_l.xml b/doxyxml/class_sphere_s_l.xml
deleted file mode 100644
index 89e4c97..0000000
--- a/doxyxml/class_sphere_s_l.xml
+++ /dev/null
@@ -1,685 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_sphere_s_l" kind="class" language="C++" prot="public">
-    <compoundname>SphereSL</compoundname>
-    <basecompoundref refid="class_axi_sym_biorth" prot="public" virt="non-virtual">AxiSymBiorth</basecompoundref>
-    <includes refid="sphere_s_l_8_h" local="no">sphereSL.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_sphere_s_l_1acd24934f776b69bf741d077c3c8d1c2f" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SphereSL::lmax</definition>
-        <argsstring></argsstring>
-        <name>lmax</name>
-        <qualifiedname>SphereSL::lmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="20" column="7" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_s_l_1a4285acc83fe9f7d06ebe22368b58139a" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SphereSL::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>SphereSL::nmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="20" column="12" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_s_l_1a376f9832332b03a278a159c12789b61b" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SphereSL::numr</definition>
-        <argsstring></argsstring>
-        <name>numr</name>
-        <qualifiedname>SphereSL::numr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="20" column="17" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_s_l_1a37bf261b5b6f306caab7354f7d8d1a30" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphereSL::rmax</definition>
-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>SphereSL::rmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="21" column="15" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="21" bodyend="-1"/>
-        <referencedby refid="class_sphere_s_l_1a490f65d960649770981d83d66d958435" compoundref="sphere_s_l_8_h" startline="62" endline="62">rb_max</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_s_l_1afeef63edbcff5c1468b6b0331f99f188" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphereSL::rmin</definition>
-        <argsstring></argsstring>
-        <name>rmin</name>
-        <qualifiedname>SphereSL::rmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="21" column="10" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="21" bodyend="-1"/>
-        <referencedby refid="class_sphere_s_l_1a6f8a05e49cc970cbf590cd237ca3cd25" compoundref="sphere_s_l_8_h" startline="61" endline="61">rb_min</referencedby>
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-        <type>double</type>
-        <definition>double SphereSL::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>SphereSL::scale</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="21" column="20" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="21" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_sphere_s_l_1a164273b12029f8caf7f754ca03132871" prot="private" static="no" mutable="no">
-        <type><ref refid="class_s_l_grid_sph" kindref="compound">SLGridSph</ref> *</type>
-        <definition>SLGridSph* SphereSL::slgrid</definition>
-        <argsstring></argsstring>
-        <name>slgrid</name>
-        <qualifiedname>SphereSL::slgrid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="23" column="13" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="23" bodyend="-1"/>
-        <referencedby refid="class_sphere_s_l_1a490f65d960649770981d83d66d958435" compoundref="sphere_s_l_8_h" startline="62" endline="62">rb_max</referencedby>
-        <referencedby refid="class_sphere_s_l_1a6f8a05e49cc970cbf590cd237ca3cd25" compoundref="sphere_s_l_8_h" startline="61" endline="61">rb_min</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_sphere_s_l_1a41cf4a3966f649b1c019494488a7c765" prot="public" static="yes" mutable="no">
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-        <argsstring></argsstring>
-        <name>cache</name>
-        <qualifiedname>SphereSL::cache</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="32" column="15" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="32" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_sphere_s_l_1a19a78d9aef587d1a5a05398c9c3f15a0" prot="public" static="yes" mutable="no">
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-        <definition>int SphereSL::mpi</definition>
-        <argsstring></argsstring>
-        <name>mpi</name>
-        <qualifiedname>SphereSL::mpi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="29" column="14" bodyfile="/home/weinberg/Projects/EXP/include/sphereSL.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_sphere_s_l_1ad6ef39426a4f8d8aaa3f8f0840fbf511" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double SphereSL::d_r_to_rb</definition>
-        <argsstring>(double const x)</argsstring>
-        <name>d_r_to_rb</name>
-        <qualifiedname>SphereSL::d_r_to_rb</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1aaaf67379cdeb608b5f9c07509bb22631">d_r_to_rb</reimplements>
-        <param>
-          <type>double const</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="60" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_sphere_s_l_1a77c5b912e0ac87d08104324a62365d4a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphereSL::d_rb_to_r</definition>
-        <argsstring>(const double x)</argsstring>
-        <name>d_rb_to_r</name>
-        <qualifiedname>SphereSL::d_rb_to_r</qualifiedname>
-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sphereSL.H" line="70" column="10"/>
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-        <type>double</type>
-        <definition>double SphereSL::dens</definition>
-        <argsstring>(const int n, const int l, const double x)</argsstring>
-        <name>dens</name>
-        <qualifiedname>SphereSL::dens</qualifiedname>
-        <reimplements refid="class_axi_sym_biorth_1a6cb90b729dbfb31340bf8930049df4cd">dens</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>n</declname>
-        </param>
-        <param>
-          <type>const int</type>
-          <declname>l</declname>
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-        <param>
-          <type>const double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <member refid="class_sphere_s_l_1a9e92c59228468a65cc08a86043cd8fcb" prot="public" virt="non-virtual"><scope>SphereSL</scope><name>get_dens</name></member>
-      <member refid="class_axi_sym_biorth_1a9e4634e741f090bd7a2c088750d894e4" prot="public" virt="non-virtual"><scope>SphereSL</scope><name>get_dof</name></member>
-      <member refid="class_sphere_s_l_1a2f27b9e586510ec276aa35facb98765c" prot="public" virt="non-virtual"><scope>SphereSL</scope><name>get_potl</name></member>
-      <member refid="class_biorth_1a732367609f458cf4128bb37f2641c30b" prot="public" virt="non-virtual"><scope>SphereSL</scope><name>id</name></member>
-      <member refid="class_sphere_s_l_1a36185e4e83af995799949cfb24d3e90b" prot="public" virt="virtual"><scope>SphereSL</scope><name>krnl</name></member>
-      <member refid="class_sphere_s_l_1acd24934f776b69bf741d077c3c8d1c2f" prot="private" virt="non-virtual"><scope>SphereSL</scope><name>lmax</name></member>
-      <member refid="class_sphere_s_l_1a19a78d9aef587d1a5a05398c9c3f15a0" prot="public" virt="non-virtual"><scope>SphereSL</scope><name>mpi</name></member>
-      <member refid="class_sphere_s_l_1a4285acc83fe9f7d06ebe22368b58139a" prot="private" virt="non-virtual"><scope>SphereSL</scope><name>nmax</name></member>
-      <member refid="class_sphere_s_l_1a1e4ac2372c6d10c177d8639451d8eb3c" prot="public" virt="virtual"><scope>SphereSL</scope><name>norm</name></member>
-      <member refid="class_sphere_s_l_1a376f9832332b03a278a159c12789b61b" prot="private" virt="non-virtual"><scope>SphereSL</scope><name>numr</name></member>
-      <member refid="class_sphere_s_l_1a0618be0d4ee7e18fce3656cff6701794" prot="public" virt="virtual"><scope>SphereSL</scope><name>potl</name></member>
-      <member refid="class_sphere_s_l_1ad123d7ae428a8efc093510dc676e1d30" prot="public" virt="virtual"><scope>SphereSL</scope><name>potl</name></member>
-      <member refid="class_sphere_s_l_1ae73b7d81422a55ab7f4b7120e9aed111" prot="public" virt="virtual"><scope>SphereSL</scope><name>potlR</name></member>
-      <member refid="class_sphere_s_l_1a4879573d3c8657afe4efafc03565b862" prot="public" virt="virtual"><scope>SphereSL</scope><name>potlRZ</name></member>
-      <member refid="class_sphere_s_l_1ab9f7e8bfe2355df79dc7e745d2af063e" prot="public" virt="virtual"><scope>SphereSL</scope><name>r_to_rb</name></member>
-      <member refid="class_sphere_s_l_1a490f65d960649770981d83d66d958435" prot="public" virt="virtual"><scope>SphereSL</scope><name>rb_max</name></member>
-      <member refid="class_sphere_s_l_1a6f8a05e49cc970cbf590cd237ca3cd25" prot="public" virt="virtual"><scope>SphereSL</scope><name>rb_min</name></member>
-      <member refid="class_sphere_s_l_1a670017621747229de479ba578cef996a" prot="public" virt="virtual"><scope>SphereSL</scope><name>rb_to_r</name></member>
-      <member refid="class_sphere_s_l_1a37bf261b5b6f306caab7354f7d8d1a30" prot="private" virt="non-virtual"><scope>SphereSL</scope><name>rmax</name></member>
-      <member refid="class_sphere_s_l_1afeef63edbcff5c1468b6b0331f99f188" prot="private" virt="non-virtual"><scope>SphereSL</scope><name>rmin</name></member>
-      <member refid="class_sphere_s_l_1a01327079cfc40d347281388328d1e2db" prot="private" virt="non-virtual"><scope>SphereSL</scope><name>scale</name></member>
-      <member refid="class_sphere_s_l_1a164273b12029f8caf7f754ca03132871" prot="private" virt="non-virtual"><scope>SphereSL</scope><name>slgrid</name></member>
-      <member refid="class_sphere_s_l_1a7800b8f7b5fd65418eafdea9b9ce4268" prot="public" virt="non-virtual"><scope>SphereSL</scope><name>SphereSL</name></member>
-      <member refid="class_axi_sym_biorth_1adcf402d63d58581bfb671cc97b213222" prot="public" virt="virtual"><scope>SphereSL</scope><name>~AxiSymBiorth</name></member>
-      <member refid="class_biorth_1a83c4824d7003048794102f54152cfdbc" prot="public" virt="virtual"><scope>SphereSL</scope><name>~Biorth</name></member>
-      <member refid="class_sphere_s_l_1ae64941af3d9cba7632b9e9ea54556dc8" prot="public" virt="non-virtual"><scope>SphereSL</scope><name>~SphereSL</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_spherical_basis.xml b/doxyxml/class_spherical_basis.xml
deleted file mode 100644
index 31fd540..0000000
--- a/doxyxml/class_spherical_basis.xml
+++ /dev/null
@@ -1,2336 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_spherical_basis" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>SphericalBasis</compoundname>
-    <basecompoundref refid="class_axisymmetric_basis" prot="public" virt="non-virtual">AxisymmetricBasis</basecompoundref>
-    <derivedcompoundref refid="class_bessel" prot="public" virt="non-virtual">Bessel</derivedcompoundref>
-    <derivedcompoundref refid="class_sphere" prot="public" virt="non-virtual">Sphere</derivedcompoundref>
-    <includes refid="_spherical_basis_8_h" local="no">SphericalBasis.H</includes>
-    <sectiondef kind="protected-type">
-      <memberdef kind="typedef" id="class_spherical_basis_1a4927dfcbaf0910033fcc37a4892f8bde" prot="protected" static="no">
-        <type>std::shared_ptr&lt; Eigen::VectorXd &gt;</type>
-        <definition>typedef std::shared_ptr&lt;Eigen::VectorXd&gt; SphericalBasis::VectorXdP</definition>
-        <argsstring></argsstring>
-        <name>VectorXdP</name>
-        <qualifiedname>SphericalBasis::VectorXdP</qualifiedname>
-        <briefdescription>
-<para>Matrices per thread for obtaining expansion coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="58" column="27" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="58" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_spherical_basis_1aac8c95f365acb42630d38d2b8a2c79f4" prot="protected" static="no" mutable="no">
-        <type>const unsigned int</type>
-        <definition>const unsigned int SphericalBasis::cmagic</definition>
-        <argsstring></argsstring>
-        <name>cmagic</name>
-        <qualifiedname>SphericalBasis::cmagic</qualifiedname>
-        <initializer>= 0xc0a57a2</initializer>
-        <briefdescription>
-<para>Coefficient magic number. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="296" column="22" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="296" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a27cb5e14065b26a1eaf8fecde6210db9" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SphericalBasis::coefMaster</definition>
-        <argsstring></argsstring>
-        <name>coefMaster</name>
-        <qualifiedname>SphericalBasis::coefMaster</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Master node ships coefficients to hosts. True (default) implies that only the master node caches the coefficients for playback to save core memory. This is set in the config input using the &apos;coefMaster: bool&apos; parameter. Once I am sure that there are no algorithmic issues, I will remove this as an option. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="312" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="312" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a843a19b3a3dc282c24cd1a6e19aab3ca" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; SphericalBasis::cosm</definition>
-        <argsstring></argsstring>
-        <name>cosm</name>
-        <qualifiedname>SphericalBasis::cosm</qualifiedname>
-        <briefdescription>
-<para>Work vectors for cosines for all values <computeroutput>m</computeroutput> </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="72" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="72" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a3cfea1dc5ab6ba11187c8ce618f4bd22" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphericalBasis::dend</definition>
-        <argsstring></argsstring>
-        <name>dend</name>
-        <qualifiedname>SphericalBasis::dend</qualifiedname>
-        <briefdescription>
-<para>Work matrix. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="78" column="19" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="78" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1acf7e4a3d55ca7d250a2b814bd95321ba" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt; std::vector&lt;Eigen::MatrixXd&gt; &gt; SphericalBasis::differ1</definition>
-        <argsstring></argsstring>
-        <name>differ1</name>
-        <qualifiedname>SphericalBasis::differ1</qualifiedname>
-        <briefdescription>
-<para>For updating levels. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="286" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="286" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1aff89452a2ddcef22eb9333b5c04df0ef" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; SphericalBasis::dlegs</definition>
-        <argsstring></argsstring>
-        <name>dlegs</name>
-        <qualifiedname>SphericalBasis::dlegs</qualifiedname>
-        <briefdescription>
-<para>Matrices per thread for obtaining derivatives legendre coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="53" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="53" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1aa1ad955dd550cd637a32cc11cccc3100" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; SphericalBasis::dpot</definition>
-        <argsstring></argsstring>
-        <name>dpot</name>
-        <qualifiedname>SphericalBasis::dpot</qualifiedname>
-        <briefdescription>
-<para>Matrices per thread for obtaining derivative of potential field. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="47" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="47" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a91d743a30554403f62492950613bea5b" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; SphericalBasis::du</definition>
-        <argsstring></argsstring>
-        <name>du</name>
-        <qualifiedname>SphericalBasis::du</qualifiedname>
-        <briefdescription>
-<para>Work vectors to make recursion evaluations thread safe. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="41" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a68de61b1e9ba7549723513791436e087" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SphericalBasis::EVEN_L</definition>
-        <argsstring></argsstring>
-        <name>EVEN_L</name>
-        <qualifiedname>SphericalBasis::EVEN_L</qualifiedname>
-        <briefdescription>
-<para>Flag use of even l harmonics only. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="242" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="242" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1acb6cedabe692304779492aaea2efb698" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SphericalBasis::EVEN_M</definition>
-        <argsstring></argsstring>
-        <name>EVEN_M</name>
-        <qualifiedname>SphericalBasis::EVEN_M</qualifiedname>
-        <briefdescription>
-<para>Flag use of even m harmonics only. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="245" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="245" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a678f0fd3cf6338763c2acd325a3e3b18" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; <ref refid="class_spherical_basis_1a4927dfcbaf0910033fcc37a4892f8bde" kindref="member">VectorXdP</ref> &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;VectorXdP&gt; &gt; SphericalBasis::expcoef0</definition>
-        <argsstring></argsstring>
-        <name>expcoef0</name>
-        <qualifiedname>SphericalBasis::expcoef0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="59" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="59" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a39e31915305ef9daa6b39d3c5cbd9dad" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphericalBasis::factorial</definition>
-        <argsstring></argsstring>
-        <name>factorial</name>
-        <qualifiedname>SphericalBasis::factorial</qualifiedname>
-        <briefdescription>
-<para>Cache factorial values. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="81" column="19" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="81" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a31522511eefb3602a9201dd0d3fd3bb8" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SphericalBasis::firstime_accel</definition>
-        <argsstring></argsstring>
-        <name>firstime_accel</name>
-        <qualifiedname>SphericalBasis::firstime_accel</qualifiedname>
-        <briefdescription>
-<para>Flag whether or not work space has been initialized for acceleration. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="108" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="108" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1aef3567656d31d9a8d694f015e0ff87fe" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SphericalBasis::firstime_coef</definition>
-        <argsstring></argsstring>
-        <name>firstime_coef</name>
-        <qualifiedname>SphericalBasis::firstime_coef</qualifiedname>
-        <briefdescription>
-<para>Flag whether or not work space has been initialized for coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="105" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="105" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a79dc94b3d9151be5c82758e785f27102" prot="protected" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd SphericalBasis::krnl</definition>
-        <argsstring></argsstring>
-        <name>krnl</name>
-        <qualifiedname>SphericalBasis::krnl</qualifiedname>
-        <briefdescription>
-<para>Will cache values of the kernel required for recursion relations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="35" column="19" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1aa594052066fda40758b8e4757fbab0aa" prot="protected" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphericalBasis::lastPlayTime</definition>
-        <argsstring></argsstring>
-        <name>lastPlayTime</name>
-        <qualifiedname>SphericalBasis::lastPlayTime</qualifiedname>
-        <briefdescription>
-<para>Last playback coefficient evaluation time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="315" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="315" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a172c954d497270d8bb6561367b990b5d" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; SphericalBasis::legs</definition>
-        <argsstring></argsstring>
-        <name>legs</name>
-        <qualifiedname>SphericalBasis::legs</qualifiedname>
-        <briefdescription>
-<para>Matrices per thread for obtaining legendre coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="50" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="50" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1a463dfd0a4b7a6f16a7a814e887dce037" prot="protected" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool SphericalBasis::M0_only</definition>
-        <argsstring></argsstring>
-        <name>M0_only</name>
-        <qualifiedname>SphericalBasis::M0_only</qualifiedname>
-        <briefdescription>
-<para>Use axisymmetric term s. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="248" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="248" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_basis_1ae90709b119fc3f5df1c76abb8145bee8" prot="protected" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SphericalBasis::meanC</definition>
-        <argsstring></argsstring>
-        <name>meanC</name>
-        <qualifiedname>SphericalBasis::meanC</qualifiedname>
-        <briefdescription>
-<para>Expected coefficient values for RMS noise computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="260" column="19" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="260" bodyend="-1"/>
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-        <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-        <definition>MixtureBasis* SphericalBasis::mix</definition>
-        <argsstring></argsstring>
-        <name>mix</name>
-        <qualifiedname>SphericalBasis::mix</qualifiedname>
-        <briefdescription>
-<para>For massive satellite simulations. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double SphericalBasis::muse0</definition>
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-        <name>muse0</name>
-        <qualifiedname>SphericalBasis::muse0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="65" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="65" bodyend="-1"/>
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; SphericalBasis::muse1</definition>
-        <argsstring></argsstring>
-        <name>muse1</name>
-        <qualifiedname>SphericalBasis::muse1</qualifiedname>
-        <briefdescription>
-<para>Mass accumulation for PCA. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="64" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="64" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool SphericalBasis::NO_L0</definition>
-        <argsstring></argsstring>
-        <name>NO_L0</name>
-        <qualifiedname>SphericalBasis::NO_L0</qualifiedname>
-        <briefdescription>
-<para>Flag fixed monopole. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="236" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="236" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool SphericalBasis::NO_L1</definition>
-        <argsstring></argsstring>
-        <name>NO_L1</name>
-        <qualifiedname>SphericalBasis::NO_L1</qualifiedname>
-        <briefdescription>
-<para>Flag drop l=1 term. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="239" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="239" bodyend="-1"/>
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-        <type>bool</type>
-        <definition>bool SphericalBasis::NOISE</definition>
-        <argsstring></argsstring>
-        <name>NOISE</name>
-        <qualifiedname>SphericalBasis::NOISE</qualifiedname>
-        <briefdescription>
-<para>Flag adding noise to coefficients (for testing diffusion) </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="251" column="8" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="251" bodyend="-1"/>
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-        <type>string</type>
-        <definition>string SphericalBasis::noise_model_file</definition>
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-        <name>noise_model_file</name>
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-        <briefdescription>
-<para>Model for RMS noise computation. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="257" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="257" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double SphericalBasis::noiseN</definition>
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-        <name>noiseN</name>
-        <qualifiedname>SphericalBasis::noiseN</qualifiedname>
-        <briefdescription>
-<para>Number of &quot;effective&quot; points for RMS noise computation. </para>
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-        <type>std::normal_distribution</type>
-        <definition>std::normal_distribution SphericalBasis::nrand</definition>
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-        <name>nrand</name>
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-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="269" column="4" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="269" bodyend="-1"/>
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-        <type>std::vector&lt; std::vector&lt; unsigned &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;unsigned&gt; &gt; SphericalBasis::occt</definition>
-        <argsstring></argsstring>
-        <name>occt</name>
-        <qualifiedname>SphericalBasis::occt</qualifiedname>
-        <briefdescription>
-<para>CUDA method for coefficient accumulation. </para>
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-        <detaileddescription>
-<para>Test change level counts for deep debugging enabled by setting SPH_UPDATE_TABLE at the top of this header file </para>
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-        </inbodydescription>
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-        <referencedby refid="class_spherical_basis_1af0aaa7a1ef27c5ccb866190e5cefd90a" compoundref="_spherical_basis_8_h" startline="379" endline="385">multistep_add_debug</referencedby>
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-        <type>bool</type>
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-        <name>ortho_check</name>
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-        <briefdescription>
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-        <detaileddescription>
-<para>Compute the biorthogonality inner product and write to a file for internal self-consistency check. Enabled by including the YAML boolean &apos;orthocheck&apos;. </para>
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-        </inbodydescription>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt; double &gt; SphericalBasis::pack</definition>
-        <argsstring></argsstring>
-        <name>pack</name>
-        <qualifiedname>SphericalBasis::pack</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>std::shared_ptr&lt; CoefClasses::SphCoefs &gt;</type>
-        <definition>std::shared_ptr&lt;CoefClasses::SphCoefs&gt; SphericalBasis::playback</definition>
-        <argsstring></argsstring>
-        <name>playback</name>
-        <qualifiedname>SphericalBasis::playback</qualifiedname>
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-        <detaileddescription>
-<para>Coefficient playback instance. Using shared_ptr to avoid constructing a simple pointer or null instance </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="304" column="19" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="304" bodyend="-1"/>
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-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; SphericalBasis::potd</definition>
-        <argsstring></argsstring>
-        <name>potd</name>
-        <qualifiedname>SphericalBasis::potd</qualifiedname>
-        <briefdescription>
-<para>Matrices per thread for obtaining potential field. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="44" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="44" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double SphericalBasis::resetT</definition>
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-        <name>resetT</name>
-        <qualifiedname>SphericalBasis::resetT</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_time" kindref="compound">Time</ref> at last multistep reset. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="69" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="69" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_spherical_basis_1a99942ed4bb5830034724f7f32c284cea" prot="protected" static="no" mutable="no">
-        <type>std::mt19937</type>
-        <definition>std::mt19937 SphericalBasis::rgen</definition>
-        <argsstring></argsstring>
-        <name>rgen</name>
-        <qualifiedname>SphericalBasis::rgen</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="268" column="16" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="268" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double SphericalBasis::rmax</definition>
-        <argsstring></argsstring>
-        <name>rmax</name>
-        <qualifiedname>SphericalBasis::rmax</qualifiedname>
-        <briefdescription>
-<para>The maximum radius. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="230" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="230" bodyend="-1"/>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>rmin</name>
-        <qualifiedname>SphericalBasis::rmin</qualifiedname>
-        <briefdescription>
-<para>The minimum radius. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>Eigen::MatrixXd</type>
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-        <argsstring></argsstring>
-        <name>rmsC</name>
-        <qualifiedname>SphericalBasis::rmsC</qualifiedname>
-        <briefdescription>
-<para>Expected squared coefficient values for RMS noise computation. </para>
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-        <type>unsigned int</type>
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-        <name>seedN</name>
-        <qualifiedname>SphericalBasis::seedN</qualifiedname>
-        <briefdescription>
-<para>Pseudorandom generation. </para>
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-<para>Flag self_consitency. </para>
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-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; SphericalBasis::sinm</definition>
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-        <name>sinm</name>
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-<para>Work vectors for sines for all values <computeroutput>m</computeroutput> </para>
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-        <type>CoefClasses::SphCoefs</type>
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-<para>Coefficient container instance for writing HDF5. </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="321" column="25" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="321" bodyend="-1"/>
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-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_spherical_basis_1a3a81bde48ab3654d1dbe004efcd06782" prot="public" static="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool SphericalBasis::NewCoefs</definition>
-        <argsstring></argsstring>
-        <name>NewCoefs</name>
-        <qualifiedname>SphericalBasis::NewCoefs</qualifiedname>
-        <briefdescription>
-<para>Use YAML header in coefficient file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="342" column="15" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="342" bodyend="-1"/>
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-    <sectiondef kind="protected-func">
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-        <type>void</type>
-        <definition>void SphericalBasis::biorthogonality_check</definition>
-        <argsstring>()</argsstring>
-        <name>biorthogonality_check</name>
-        <qualifiedname>SphericalBasis::biorthogonality_check</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="336" column="8"/>
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-      <memberdef kind="function" id="class_spherical_basis_1a1fb812ef3e4559b795aa1407ceaa6079" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::check_range</definition>
-        <argsstring>()</argsstring>
-        <name>check_range</name>
-        <qualifiedname>SphericalBasis::check_range</qualifiedname>
-        <briefdescription>
-<para>Provided by derived classes to check consistency. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="87" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ac6b350512a9ae518f4c8cbecb4a46593" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::compute_multistep_coefficients</definition>
-        <argsstring>()</argsstring>
-        <name>compute_multistep_coefficients</name>
-        <qualifiedname>SphericalBasis::compute_multistep_coefficients</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Extrapolate and sum coefficents per multistep level to get a complete set of coefficients for force evaluation at an intermediate time step </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="282" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ac6d657e39329e543766a4503f25d3a37" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::compute_rms_coefs</definition>
-        <argsstring>(void)</argsstring>
-        <name>compute_rms_coefs</name>
-        <qualifiedname>SphericalBasis::compute_rms_coefs</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Compute rms coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="220" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a8371f1f235cbd49dbf0bd89541d8fdaf" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalBasis::d_r_to_xi</definition>
-        <argsstring>(double r)</argsstring>
-        <name>d_r_to_xi</name>
-        <qualifiedname>SphericalBasis::d_r_to_xi</qualifiedname>
-        <reimplementedby refid="class_sphere_1a5f0f6e819b476dfa29d1dad5b267a14a">d_r_to_xi</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="327" column="18" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="327" bodyend="327"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a45f237bae8eb688588b95f8a0522b10d" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>virtual void * SphericalBasis::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>SphericalBasis::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a45b09387fd7083e15a11522454f4c4b3">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Thread method for accerlation compuation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="217" column="17"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1af9309f6e0f2eb72d4e3c046a15634a70" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::determine_coefficients_particles</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients_particles</name>
-        <qualifiedname>SphericalBasis::determine_coefficients_particles</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Compute the coefficients from particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="114" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a100361ca78665ea58fb37f141f98bf07" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::determine_coefficients_playback</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients_playback</name>
-        <qualifiedname>SphericalBasis::determine_coefficients_playback</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Compute the coefficients from an table. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="117" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a7ad9fad36d8b7074c7b47d0126ca26ef" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>virtual void * SphericalBasis::determine_coefficients_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_coefficients_thread</name>
-        <qualifiedname>SphericalBasis::determine_coefficients_thread</qualifiedname>
-        <reimplements refid="class_pot_accel_1a28536cd936e5c94562d5bccff2470d49">determine_coefficients_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-<para>Thread method for coefficient accumulation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="111" column="17"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a34866d25c28ce00edf20be346f43361f" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::dump_coefs_all</definition>
-        <argsstring>(ostream &amp;)</argsstring>
-        <name>dump_coefs_all</name>
-        <qualifiedname>SphericalBasis::dump_coefs_all</qualifiedname>
-        <param>
-          <type>ostream &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Dump current coefficients (all multistep levels) For debugging . . . </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="293" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ababeb377d9cc8f3150b3dac614fed0bb" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::get_dens_coefs</definition>
-        <argsstring>(int l, Eigen::VectorXd &amp;coef, double &amp;p)</argsstring>
-        <name>get_dens_coefs</name>
-        <qualifiedname>SphericalBasis::get_dens_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Get density from coefficient vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="102" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ab38a879d817874f75e324347afe33cb6" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::get_pot_coefs</definition>
-        <argsstring>(int l, const Eigen::VectorXd &amp;coef, double &amp;p, double &amp;dp)</argsstring>
-        <name>get_pot_coefs</name>
-        <qualifiedname>SphericalBasis::get_pot_coefs</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <briefdescription>
-<para>Get potential and accel field values from coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="93" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a590da9389de7deca03880fc5b1c6e3a4" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::get_pot_coefs_safe</definition>
-        <argsstring>(int l, const Eigen::VectorXd &amp;coef, double &amp;p, double &amp;dp, Eigen::MatrixXd &amp;potd1, Eigen::MatrixXd &amp;dpot1)</argsstring>
-        <name>get_pot_coefs_safe</name>
-        <qualifiedname>SphericalBasis::get_pot_coefs_safe</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>potd1</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dpot1</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get potential and field values from coefficients (provide workspace for thread safety) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="97" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a33f78daf1c5dcf5ac4d327662963b1a5" prot="protected" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>SphericalBasis::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <reimplementedby refid="class_bessel_1abab1334fcaeedd6ad07b0afda79741d6">initialize</reimplementedby>
-        <reimplementedby refid="class_sphere_1aba7d59251bc70b4b2f45271025f285ff">initialize</reimplementedby>
-        <briefdescription>
-<para>Initialize method. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="84" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a7db3a78056025d8c840dd22bae0b2692" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::occt_output</definition>
-        <argsstring>()</argsstring>
-        <name>occt_output</name>
-        <qualifiedname>SphericalBasis::occt_output</qualifiedname>
-        <briefdescription>
-<para>Print deep debugging data. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="214" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ad1b2e558ad5f084a43d5368e86910763" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalBasis::r_to_xi</definition>
-        <argsstring>(double r)</argsstring>
-        <name>r_to_xi</name>
-        <qualifiedname>SphericalBasis::r_to_xi</qualifiedname>
-        <reimplementedby refid="class_sphere_1a60b2648f82fede09d60f0bc36bc4cd96">r_to_xi</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Radial coordinate mapping (r-&gt;x, and x-&gt;r) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="325" column="18" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="325" bodyend="325"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1aa6cc607bac98ab8abef4c46a6a06fee2" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::setup</definition>
-        <argsstring>()</argsstring>
-        <name>setup</name>
-        <qualifiedname>SphericalBasis::setup</qualifiedname>
-        <briefdescription>
-<para>Should be called by derived classes after initialization. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="90" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1aeee5549cb30e7c608c8255783ab10a52" prot="protected" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::update_noise</definition>
-        <argsstring>(void)</argsstring>
-        <name>update_noise</name>
-        <qualifiedname>SphericalBasis::update_noise</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Add noise. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="223" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a84edfe45c66d8221046d65aa63d19f8a" prot="protected" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalBasis::xi_to_r</definition>
-        <argsstring>(double x)</argsstring>
-        <name>xi_to_r</name>
-        <qualifiedname>SphericalBasis::xi_to_r</qualifiedname>
-        <reimplementedby refid="class_sphere_1a6699301c6969c5499ddf669f7f4fbffc">xi_to_r</reimplementedby>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="326" column="18" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="326" bodyend="326"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
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-        <type>void</type>
-        <definition>virtual void SphericalBasis::determine_acceleration_and_potential</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>SphericalBasis::determine_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_basis_1abb4dbfbe9c234f44b1719a4d89dc3951">determine_acceleration_and_potential</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Required member to compute accleration and potential with threading. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>The thread member must be supplied by the derived class </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="367" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a8ff7907cd7af5f79b63f11282c277cb2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::determine_coefficients</definition>
-        <argsstring>(Component *c)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>SphericalBasis::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724">determine_coefficients</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>Compute coefficients with threading using the provided component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="362" column="16" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="362" bodyend="363"/>
-        <references refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" compoundref="_pot_accel_8_h" startline="59">PotAccel::cC</references>
-        <references refid="class_spherical_basis_1a91e8b02d7a7482ba2dd12cbae311533c">determine_coefficients</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a91e8b02d7a7482ba2dd12cbae311533c" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::determine_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>SphericalBasis::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <reimplementedby refid="class_sphere_1a6d9c19cd5b655fb7e47fdbb680fe3e25">determine_coefficients</reimplementedby>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Required member to compute coeifficients with threading. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>The thread member must be supplied by the derived class </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="359" column="16"/>
-        <referencedby refid="class_spherical_basis_1a8ff7907cd7af5f79b63f11282c277cb2" compoundref="_spherical_basis_8_h" startline="362" endline="363">determine_coefficients</referencedby>
-        <referencedby refid="class_sphere_1a6d9c19cd5b655fb7e47fdbb680fe3e25" compoundref="_sphere_8_h" startline="139" endline="143">Sphere::determine_coefficients</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a84fc725d4e62f743a3846b8b5908a42e" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::determine_fields_at_point</definition>
-        <argsstring>(double x, double y, double z, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotx, double *tpoty, double *tpotz)</argsstring>
-        <name>determine_fields_at_point</name>
-        <qualifiedname>SphericalBasis::determine_fields_at_point</qualifiedname>
-        <reimplements refid="class_basis_1a8d4bece8ddfe81223177e63d76779284">determine_fields_at_point</reimplements>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotx</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpoty</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <briefdescription>
-<para>Return the value for the fields in Cartesian coordinates. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="445" column="9"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ab11fe59ba8d3a8e251ea96e72d93b654" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::determine_fields_at_point_cyl</definition>
-        <argsstring>(double r, double z, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpotz, double *tpotp)</argsstring>
-        <name>determine_fields_at_point_cyl</name>
-        <qualifiedname>SphericalBasis::determine_fields_at_point_cyl</qualifiedname>
-        <reimplements refid="class_basis_1a3bcc5e3250f82d0ce476b096eabf342a">determine_fields_at_point_cyl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotz</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-<para>Returns the potential, its derivatives &amp; density in cylindrical coords. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="459" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ab139a46a2cc6813b375b041dbe3b6498" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::determine_fields_at_point_sph</definition>
-        <argsstring>(double r, double theta, double phi, double *tdens0, double *tpotl0, double *tdens, double *tpotl, double *tpotr, double *tpott, double *tpotp)</argsstring>
-        <name>determine_fields_at_point_sph</name>
-        <qualifiedname>SphericalBasis::determine_fields_at_point_sph</qualifiedname>
-        <reimplements refid="class_basis_1a34f7d4340bcd0c5452f430cebf5c3665">determine_fields_at_point_sph</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>theta</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>phi</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl0</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tdens</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotl</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotr</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpott</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>tpotp</declname>
-        </param>
-        <briefdescription>
-<para>Returns the potential, its derivatives &amp; density in spherical coords. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="452" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a518203f6db28e171c7dccd04611994b5" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::dump_coefs</definition>
-        <argsstring>(ostream &amp;)</argsstring>
-        <name>dump_coefs</name>
-        <qualifiedname>SphericalBasis::dump_coefs</qualifiedname>
-        <reimplements refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf">dump_coefs</reimplements>
-        <param>
-          <type>ostream &amp;</type>
-        </param>
-        <briefdescription>
-<para>Dump current coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="472" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1aababccfd0ab296c683963963caead0be" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void SphericalBasis::dump_coefs_h5</definition>
-        <argsstring>(const std::string &amp;file)</argsstring>
-        <name>dump_coefs_h5</name>
-        <qualifiedname>SphericalBasis::dump_coefs_h5</qualifiedname>
-        <reimplements refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c">dump_coefs_h5</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>file</declname>
-        </param>
-        <briefdescription>
-<para>Dump current coefficients into named HDF5 file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="475" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a05f775f3bae56543829492fae9a0b75f" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::get_acceleration_and_potential</definition>
-        <argsstring>(Component *cC)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>SphericalBasis::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>cC</declname>
-        </param>
-        <briefdescription>
-<para>Required member to compute accelration and potential. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>This implemenation should be fine for most cases </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="355" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a0e2377c1cdc1335562343e01e4dee7cd" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::get_dens</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;d, int tid)=0</argsstring>
-        <name>get_dens</name>
-        <qualifiedname>SphericalBasis::get_dens</qualifiedname>
-        <reimplementedby refid="class_bessel_1a2880028fe7092ce5a0dbcc2faeee3fc9">get_dens</reimplementedby>
-        <reimplementedby refid="class_sphere_1ac5738f6eed896da5c7c53d463decdf00">get_dens</reimplementedby>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="426" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ac3eafe5175c669b7b7b86932c764af32" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::get_dpotl</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;dp, int tid)=0</argsstring>
-        <name>get_dpotl</name>
-        <qualifiedname>SphericalBasis::get_dpotl</qualifiedname>
-        <reimplementedby refid="class_bessel_1ac29bd18788d05f1c59fe5d631b439f24">get_dpotl</reimplementedby>
-        <reimplementedby refid="class_sphere_1a8c6a7bce9e2621c37ae76e1f863fa80c">get_dpotl</reimplementedby>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>dp</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the derivative of the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="400" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a63cdde991a10a6309a97e3af6b5833b3" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::get_potl</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, int tid)=0</argsstring>
-        <name>get_potl</name>
-        <qualifiedname>SphericalBasis::get_potl</qualifiedname>
-        <reimplementedby refid="class_bessel_1a50c293c90a3bca22c6146e0239edb15b">get_potl</reimplementedby>
-        <reimplementedby refid="class_sphere_1a652173e111f6605982c6adbc65f32293">get_potl</reimplementedby>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="413" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a2823c30f130d1a33768cce788b05c34e" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::get_potl_dens</definition>
-        <argsstring>(int lmax, int nmax, double r, Eigen::MatrixXd &amp;p, Eigen::MatrixXd &amp;d, int tid)=0</argsstring>
-        <name>get_potl_dens</name>
-        <qualifiedname>SphericalBasis::get_potl_dens</qualifiedname>
-        <reimplementedby refid="class_bessel_1a478e81687b976d233bc5d81b572bafb5">get_potl_dens</reimplementedby>
-        <reimplementedby refid="class_sphere_1a2c795a70918899c354bb33176957103f">get_potl_dens</reimplementedby>
-        <param>
-          <type>int</type>
-          <declname>lmax</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>nmax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
-          <declname>d</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>tid</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get derivative of potential <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>lmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum harmonic order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>nmax</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the maximum radial order </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>r</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the evaluation radius </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>p</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the potential </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>d</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>will be returned array in harmonics l and radial order n for the density </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>tid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the thread enumerator that allows the function to provide some thread safety </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="441" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a601c0bfd766bc3de1f4983430b110663" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalBasis::knl</definition>
-        <argsstring>(int, int)</argsstring>
-        <name>knl</name>
-        <qualifiedname>SphericalBasis::knl</qualifiedname>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <briefdescription>
-<para>Kernel value for recursion relation basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="469" column="18" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="469" bodyend="469"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1af0aaa7a1ef27c5ccb866190e5cefd90a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::multistep_add_debug</definition>
-        <argsstring>(const std::vector&lt; std::vector&lt; std::pair&lt; unsigned, unsigned &gt; &gt; &gt; &amp;data)</argsstring>
-        <name>multistep_add_debug</name>
-        <qualifiedname>SphericalBasis::multistep_add_debug</qualifiedname>
-        <param>
-          <type>const std::vector&lt; std::vector&lt; std::pair&lt; unsigned, unsigned &gt; &gt; &gt; &amp;</type>
-          <declname>data</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="378" column="16" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="379" bodyend="385"/>
-        <references refid="class_spherical_basis_1a2c45c3e7a097ab190a77f882dac5c2c2" compoundref="_spherical_basis_8_h" startline="211">occt</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1aef978544ce5d90a116759fd3a87a8634" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::multistep_reset</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_reset</name>
-        <qualifiedname>SphericalBasis::multistep_reset</qualifiedname>
-        <reimplements refid="class_axisymmetric_basis_1a93d8a3c0e104139477fec734a6baf8e6">multistep_reset</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step coefficient table when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="374" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a92c55df02156ac2f3633bfa950eb795b" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::multistep_update</definition>
-        <argsstring>(int cur, int next, Component *c, int i, int id)</argsstring>
-        <name>multistep_update</name>
-        <qualifiedname>SphericalBasis::multistep_update</qualifiedname>
-        <reimplements refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a">multistep_update</reimplements>
-        <param>
-          <type>int</type>
-          <declname>cur</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>next</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-<para>Implementation of level shifts. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="376" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1af2393d23ec465c58280cc952a92c6fa8" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::multistep_update_begin</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_begin</name>
-        <qualifiedname>SphericalBasis::multistep_update_begin</qualifiedname>
-        <reimplements refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381">multistep_update_begin</reimplements>
-        <briefdescription>
-<para>Execute to begin level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step force algorithm when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="375" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a50f766814b5eb9fd2d3922da477c16e5" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalBasis::multistep_update_finish</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_finish</name>
-        <qualifiedname>SphericalBasis::multistep_update_finish</qualifiedname>
-        <reimplements refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e">multistep_update_finish</reimplements>
-        <briefdescription>
-<para>Execute to finish level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="377" column="16"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1ad436a9e7fe4b8dca580322b59dd1b9fe" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalBasis::norm</definition>
-        <argsstring>(int, int)</argsstring>
-        <name>norm</name>
-        <qualifiedname>SphericalBasis::norm</qualifiedname>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <briefdescription>
-<para>Normalization for recursion relation basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="466" column="18" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="466" bodyend="466"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a597c70fc53eab8ec04f7ab86c04fec42" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>SphericalBasis::SphericalBasis</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf, MixtureBasis *m=0)</argsstring>
-        <name>SphericalBasis</name>
-        <qualifiedname>SphericalBasis::SphericalBasis</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <param>
-          <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-          <declname>m</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-<para>Constructor (<computeroutput>line</computeroutput> contains the paramter list) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="345" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1a37942ed713092a019dbc750b2c44c2d7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>SphericalBasis::SphericalBasis</definition>
-        <argsstring>(const SphericalBasis &amp;p)</argsstring>
-        <name>SphericalBasis</name>
-        <qualifiedname>SphericalBasis::SphericalBasis</qualifiedname>
-        <param>
-          <type>const <ref refid="class_spherical_basis" kindref="compound">SphericalBasis</ref> &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Copy constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="348" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_basis_1aa752534f77e17674a6a99da2549af843" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type></type>
-        <definition>virtual SphericalBasis::~SphericalBasis</definition>
-        <argsstring>()</argsstring>
-        <name>~SphericalBasis</name>
-        <qualifiedname>SphericalBasis::~SphericalBasis</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="351" column="11"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Defines a spherical basis with members specific to spherical symmetry. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Bessel</label>
-        <link refid="class_bessel"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="6">
-        <label>Sphere</label>
-        <link refid="class_sphere"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>SphericalBasis</label>
-        <link refid="class_spherical_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>AxisymmetricBasis</label>
-        <link refid="class_axisymmetric_basis"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="6" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="7" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="9" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="10">
-        <label>MixtureBasis</label>
-        <link refid="class_mixture_basis"/>
-        <childnode refid="11" relation="usage">
-          <edgelabel>p</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="8" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="4">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>SphericalBasis</label>
-        <link refid="class_spherical_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="10" relation="usage">
-          <edgelabel>mix</edgelabel>
-        </childnode>
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-      <node id="9">
-        <label>Timer</label>
-        <link refid="class_timer"/>
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-      <node id="11">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="4" relation="public-inheritance">
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>exp_in</edgelabel>
-          <edgelabel>exp_out</edgelabel>
-        </childnode>
-        <childnode refid="10" relation="usage">
-          <edgelabel>mix_in</edgelabel>
-          <edgelabel>mix_out</edgelabel>
-        </childnode>
-      </node>
-      <node id="5">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
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-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/SphericalBasis.H" line="29" column="1" bodyfile="/home/weinberg/Projects/EXP/src/SphericalBasis.H" bodystart="30" bodyend="476"/>
-    <listofallmembers>
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-      <member refid="class_basis_1a3deeb360a898d1c144f7f6ad44813b3e" prot="public" virt="non-virtual"><scope>SphericalBasis</scope><name>Basis</name></member>
-      <member refid="class_spherical_basis_1a1066050b6ba526768710115eced4144f" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>biorthogonality_check</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>cC</name></member>
-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>SphericalBasis</scope><name>cc_lock</name></member>
-      <member refid="class_spherical_basis_1a1fb812ef3e4559b795aa1407ceaa6079" prot="protected" virt="virtual"><scope>SphericalBasis</scope><name>check_range</name></member>
-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>SphericalBasis</scope><name>ClearExternal</name></member>
-      <member refid="class_spherical_basis_1aac8c95f365acb42630d38d2b8a2c79f4" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>cmagic</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>coef_dump</name></member>
-      <member refid="class_spherical_basis_1a27cb5e14065b26a1eaf8fecde6210db9" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>coefMaster</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>SphericalBasis</scope><name>compute</name></member>
-      <member refid="class_spherical_basis_1ac6b350512a9ae518f4c8cbecb4a46593" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>compute_multistep_coefficients</name></member>
-      <member refid="class_spherical_basis_1ac6d657e39329e543766a4503f25d3a37" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>compute_rms_coefs</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>conf</name></member>
-      <member refid="class_spherical_basis_1a843a19b3a3dc282c24cd1a6e19aab3ca" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>cosm</name></member>
-      <member refid="class_axisymmetric_basis_1a7bd4492f833f728f99891d38b7493631" prot="private" virt="non-virtual"><scope>SphericalBasis</scope><name>covar</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>SphericalBasis</scope><name>cube</name></member>
-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>cuda_aware</name></member>
-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>SphericalBasis</scope><name>cudaAware</name></member>
-      <member refid="class_axisymmetric_basis_1a739cec07895fdd02850006d6a52639a8" prot="private" virt="non-virtual"><scope>SphericalBasis</scope><name>cuml</name></member>
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-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>current_keys</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>SphericalBasis</scope><name>cylinder</name></member>
-      <member refid="class_spherical_basis_1a8371f1f235cbd49dbf0bd89541d8fdaf" prot="protected" virt="virtual"><scope>SphericalBasis</scope><name>d_r_to_xi</name></member>
-      <member refid="class_axisymmetric_basis_1ad3b6c5272fa2aae68be0177ebb3f2edd" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>defSampT</name></member>
-      <member refid="class_spherical_basis_1a3cfea1dc5ab6ba11187c8ce618f4bd22" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>dend</name></member>
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-      <member refid="class_spherical_basis_1a8ff7907cd7af5f79b63f11282c277cb2" prot="public" virt="virtual"><scope>SphericalBasis</scope><name>determine_coefficients</name></member>
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-      <member refid="class_spherical_basis_1a7ad9fad36d8b7074c7b47d0126ca26ef" prot="protected" virt="virtual"><scope>SphericalBasis</scope><name>determine_coefficients_thread</name></member>
-      <member refid="class_spherical_basis_1a84fc725d4e62f743a3846b8b5908a42e" prot="public" virt="virtual"><scope>SphericalBasis</scope><name>determine_fields_at_point</name></member>
-      <member refid="class_spherical_basis_1ab11fe59ba8d3a8e251ea96e72d93b654" prot="public" virt="virtual"><scope>SphericalBasis</scope><name>determine_fields_at_point_cyl</name></member>
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-      <member refid="class_spherical_basis_1acf7e4a3d55ca7d250a2b814bd95321ba" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>differ1</name></member>
-      <member refid="class_basis_1ad9a9f2f2d18335ae482b1d4e12490d0b" prot="public" virt="non-virtual"><scope>SphericalBasis</scope><name>dlegendre_R</name></member>
-      <member refid="class_spherical_basis_1aff89452a2ddcef22eb9333b5c04df0ef" prot="protected" virt="non-virtual"><scope>SphericalBasis</scope><name>dlegs</name></member>
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diff --git a/doxyxml/class_spherical_model_multi.xml b/doxyxml/class_spherical_model_multi.xml
deleted file mode 100644
index 80cb412..0000000
--- a/doxyxml/class_spherical_model_multi.xml
+++ /dev/null
@@ -1,793 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_spherical_model_multi" kind="class" language="C++" prot="public">
-    <compoundname>SphericalModelMulti</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_spherical_model_multi_1a5ba07cf46117a3f0146b3632587115aa" prot="protected" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;AxiSymModel&gt; SphericalModelMulti::fake</definition>
-        <argsstring></argsstring>
-        <name>fake</name>
-        <qualifiedname>SphericalModelMulti::fake</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="445" column="24" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="445" bodyend="-1"/>
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-        <type><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref></type>
-        <definition>SphericalOrbit SphericalModelMulti::gen_orb</definition>
-        <argsstring></argsstring>
-        <name>gen_orb</name>
-        <qualifiedname>SphericalModelMulti::gen_orb</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="447" column="22" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="447" bodyend="-1"/>
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-        <definition>bool SphericalModelMulti::noneg</definition>
-        <argsstring></argsstring>
-        <name>noneg</name>
-        <qualifiedname>SphericalModelMulti::noneg</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="450" column="8" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="450" bodyend="-1"/>
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-        <definition>SphericalOrbit SphericalModelMulti::orb</definition>
-        <argsstring></argsstring>
-        <name>orb</name>
-        <qualifiedname>SphericalModelMulti::orb</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="447" column="18" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="447" bodyend="-1"/>
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-        <name>real</name>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="445" column="19" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="445" bodyend="-1"/>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="449" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="449" bodyend="-1"/>
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-        <qualifiedname>SphericalModelMulti::allowNegativeMass</qualifiedname>
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-<para>Turn off negative mass suppression by NOT requeueing particle selection if the DF ratio is negative </para>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="518" column="8" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="518" bodyend="518"/>
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-        <reimplements refid="class_axi_sym_model_1a2978a19f299f41fdea7e3cefc1164e3a">dfde</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="497" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="497" bodyend="497"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1abadc19b8b3e98840277f26aa1855daf4" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelMulti::dfdl</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfdl</name>
-        <qualifiedname>SphericalModelMulti::dfdl</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a120cec5af54e43d727f83df8678cc93b">dfdl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="498" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="498" bodyend="498"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1ac81c1cc85381bef76d21ad391363fcd7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelMulti::distf</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>distf</name>
-        <qualifiedname>SphericalModelMulti::distf</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a5530c3612f1c09c6c77401a9e21550b8">distf</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate distribution function and its partial derivatives. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="496" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="496" bodyend="496"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1a9f3e6273a43842ea067baedf7732264c" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SphericalModelMulti::gen_point</definition>
-        <argsstring>(double Emin, double Emax, double Kmin, double Kmax, int &amp;ierr)</argsstring>
-        <name>gen_point</name>
-        <qualifiedname>SphericalModelMulti::gen_point</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a5e4cb31e8463807b1b14b3858c5c03b2">gen_point</reimplements>
-        <param>
-          <type>double</type>
-          <declname>Emin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Emax</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Kmin</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Kmax</declname>
-        </param>
-        <param>
-          <type>int &amp;</type>
-          <declname>ierr</declname>
-        </param>
-        <briefdescription>
-<para>Generate a phase-space point at a particular energy and angular momentum. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="506" column="19"/>
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-      <memberdef kind="function" id="class_spherical_model_multi_1a4e551c031311012093e09b099ecf84c0" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SphericalModelMulti::gen_point</definition>
-        <argsstring>(double r, int &amp;ierr)</argsstring>
-        <name>gen_point</name>
-        <qualifiedname>SphericalModelMulti::gen_point</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a8ec2585dc6f33e2ebae4f8dd3d22fc5a">gen_point</reimplements>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>int &amp;</type>
-          <declname>ierr</declname>
-        </param>
-        <briefdescription>
-<para>Generate a phase-space point at a particular radius. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="505" column="19"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1a07ef73cc9896c942f12558184ef946d3" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SphericalModelMulti::gen_point</definition>
-        <argsstring>(int &amp;ierr)</argsstring>
-        <name>gen_point</name>
-        <qualifiedname>SphericalModelMulti::gen_point</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a29297280d1fb4603b2138a7a2ede86f4">gen_point</reimplements>
-        <param>
-          <type>int &amp;</type>
-          <declname>ierr</declname>
-        </param>
-        <briefdescription>
-<para>Overloaded to provide mass distribution from Real and Number distribution from Fake. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="504" column="19"/>
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-      <memberdef kind="function" id="class_spherical_model_multi_1a9a468fdf81143ee84f88305d2cd509c1" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalModelMulti::get_density</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_density</name>
-        <qualifiedname>SphericalModelMulti::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="463" column="18" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="463" bodyend="464"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-        <referencedby refid="class_spherical_model_multi_1a7b6112e6579a55f85ac0fa259e31a74f" compoundref="massmodel_8_h" startline="481" endline="482">get_density</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1a7b6112e6579a55f85ac0fa259e31a74f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelMulti::get_density</definition>
-        <argsstring>(const double x1, const double x2, const double x3)</argsstring>
-        <name>get_density</name>
-        <qualifiedname>SphericalModelMulti::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc">get_density</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The density at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="481" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="481" bodyend="482"/>
-        <references refid="class_spherical_model_multi_1a9a468fdf81143ee84f88305d2cd509c1" compoundref="massmodel_8_h" startline="463" endline="464">get_density</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1aa4e9bded3e82e3b4627f675b6b9b5964" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalModelMulti::get_dpot</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_dpot</name>
-        <qualifiedname>SphericalModelMulti::get_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845">get_dpot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="469" column="18" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="469" bodyend="470"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1a8566c412db568e823ce4ef3cafaa3125" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalModelMulti::get_dpot2</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_dpot2</name>
-        <qualifiedname>SphericalModelMulti::get_dpot2</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a77b9bb693457557d379167ca0ca2caae">get_dpot2</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="472" column="18" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="472" bodyend="473"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1a65ebc1eb5f35627454a0b6c4984f03b8" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalModelMulti::get_mass</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>SphericalModelMulti::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465">get_mass</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the profile at a radial point. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="460" column="18" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="460" bodyend="461"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-        <referencedby refid="class_spherical_model_multi_1a551f086df0f5490988e4c24dfee68814" compoundref="massmodel_8_h" startline="478" endline="479">get_mass</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1a551f086df0f5490988e4c24dfee68814" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelMulti::get_mass</definition>
-        <argsstring>(const double x1, const double x2, const double x3)</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>SphericalModelMulti::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787">get_mass</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Get the mass inside of position (x, y, z) (this is ambiguous in general and will depend on the model) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="478" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="478" bodyend="479"/>
-        <references refid="class_spherical_model_multi_1a65ebc1eb5f35627454a0b6c4984f03b8" compoundref="massmodel_8_h" startline="460" endline="461">get_mass</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1aeca64ad986d43f323c40f28d22d3f819" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelMulti::get_max_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_max_radius</name>
-        <qualifiedname>SphericalModelMulti::get_max_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a87510a095e6b9533812eba57c7ca862c">get_max_radius</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="491" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="491" bodyend="491"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1aec9c6dae332ab2114dee54b0fe7c58fc" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelMulti::get_min_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_min_radius</name>
-        <qualifiedname>SphericalModelMulti::get_min_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab304897a450a2d79f4e27841526b70e9">get_min_radius</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Additional member functions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="490" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="490" bodyend="490"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1aa65434e5ba8b9e7891271304c2d473f2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalModelMulti::get_pot</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SphericalModelMulti::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="466" column="18" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="466" bodyend="467"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-        <referencedby refid="class_spherical_model_multi_1a6461fc2527edb5dff8274536be27b94d" compoundref="massmodel_8_h" startline="484" endline="485">get_pot</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1a6461fc2527edb5dff8274536be27b94d" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelMulti::get_pot</definition>
-        <argsstring>(const double x1, const double x2, const double x3)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SphericalModelMulti::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The potential at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="484" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="484" bodyend="485"/>
-        <references refid="class_spherical_model_multi_1aa65434e5ba8b9e7891271304c2d473f2" compoundref="massmodel_8_h" startline="466" endline="467">get_pot</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1ad230198fa39bc386d2511d4710554b02" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void SphericalModelMulti::get_pot_dpot</definition>
-        <argsstring>(const double r, double &amp;p, double &amp;dp)</argsstring>
-        <name>get_pot_dpot</name>
-        <qualifiedname>SphericalModelMulti::get_pot_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a4fc766458a1f45b3ece0410b2c85b632">get_pot_dpot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>p</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>dp</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="475" column="16" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="475" bodyend="476"/>
-        <references refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" compoundref="massmodel_8_h" startline="445">real</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_multi_1aecea27b51fc62f4b286369cd19d8f663" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalModelMulti::set_max_radius</definition>
-        <argsstring>(const double &amp;r)</argsstring>
-        <name>set_max_radius</name>
-        <qualifiedname>SphericalModelMulti::set_max_radius</qualifiedname>
-        <param>
-          <type>const double &amp;</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="513" column="8" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="513" bodyend="513"/>
-        <references refid="class_spherical_model_multi_1a528e9d4bfd048a6660c2e6a337c9c53c" compoundref="massmodel_8_h" startline="449">rmax_gen</references>
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-        <qualifiedname>SphericalModelMulti::set_min_radius</qualifiedname>
-        <param>
-          <type>const double &amp;</type>
-          <declname>r</declname>
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-<para>Set new minimum and maximum for realization. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-<para>Constructor. </para>
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-        <detaileddescription>
-        </detaileddescription>
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-<para>This uses two SphericalModelTables to define a mass profile and a number profile for generating a distribution with variable mass per particle. </para>
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-          <edgelabel>gen_orb</edgelabel>
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-        <label>GaussQuad</label>
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-        <label>MassModel</label>
-        <link refid="class_mass_model"/>
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-        <label>RegularOrbit</label>
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-          <edgelabel>gen_orb</edgelabel>
-          <edgelabel>orb</edgelabel>
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-        <link refid="class_spherical_orbit"/>
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-          <edgelabel>angle_grid</edgelabel>
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-          <edgelabel>Gkn</edgelabel>
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-        <label>std::enable_shared_from_this&lt; AxiSymModel &gt;</label>
-      </node>
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-      <member refid="class_axi_sym_model_1ad3e1a1fcfe55dfa0f9332673faaad460" prot="protected" virt="non-virtual"><scope>SphericalModelMulti</scope><name>gen_firstime</name></member>
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-      <member refid="class_axi_sym_model_1a20602aa25410c1f5d2bc3bf017899049" prot="protected" virt="non-virtual"><scope>SphericalModelMulti</scope><name>gen_point_3d</name></member>
-      <member refid="class_axi_sym_model_1adcafd558768aeb72e0cc483f231a1be5" prot="public" virt="virtual"><scope>SphericalModelMulti</scope><name>gen_point_jeans</name></member>
-      <member refid="class_axi_sym_model_1a13d7af1df29796004e2d14194d8d8c7a" prot="protected" virt="non-virtual"><scope>SphericalModelMulti</scope><name>gen_point_jeans_3d</name></member>
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-      <member refid="class_axi_sym_model_1a0dd4a002aead3430280c95b84a33848c" prot="public" virt="non-virtual"><scope>SphericalModelMulti</scope><name>gen_rmin</name></member>
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-      <member refid="class_axi_sym_model_1ac9a6c290463cfe45d95656d37c0c45f8" prot="public" virt="virtual"><scope>SphericalModelMulti</scope><name>~AxiSymModel</name></member>
-      <member refid="class_mass_model_1a95c0338ca07d1b2ea284c3c2605dc9b8" prot="public" virt="virtual"><scope>SphericalModelMulti</scope><name>~MassModel</name></member>
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-</doxygen>
diff --git a/doxyxml/class_spherical_model_table.xml b/doxyxml/class_spherical_model_table.xml
deleted file mode 100644
index 30415f0..0000000
--- a/doxyxml/class_spherical_model_table.xml
+++ /dev/null
@@ -1,1148 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_spherical_model_table" kind="class" language="C++" prot="public">
-    <compoundname>SphericalModelTable</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
-    <derivedcompoundref refid="class_king_sphere" prot="public" virt="non-virtual">KingSphere</derivedcompoundref>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_spherical_model_table_1a1f297a9351eaa409ee5b6be2be98c531" prot="private" static="no" mutable="no">
-        <type><ref refid="class_r_u_n" kindref="compound">RUN</ref></type>
-        <definition>RUN SphericalModelTable::density</definition>
-        <argsstring></argsstring>
-        <name>density</name>
-        <qualifiedname>SphericalModelTable::density</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="342" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="342" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_model_table_1a55ab5d0206ae4acb7dd7a311536c817f" prot="private" static="no" mutable="no">
-        <type><ref refid="class_f_d_i_s_t" kindref="compound">FDIST</ref></type>
-        <definition>FDIST SphericalModelTable::df</definition>
-        <argsstring></argsstring>
-        <name>df</name>
-        <qualifiedname>SphericalModelTable::df</qualifiedname>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="344" column="9" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="344" bodyend="-1"/>
-        <referencedby refid="class_spherical_model_table_1a11344205c811bc5cf508d30ee227a9aa" compoundref="massmodel_8_h" startline="424" endline="424">get_ra2</referencedby>
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-        <type><ref refid="class_f_d_i_s_t_c" kindref="compound">FDISTC</ref></type>
-        <definition>FDISTC SphericalModelTable::dfc</definition>
-        <argsstring></argsstring>
-        <name>dfc</name>
-        <qualifiedname>SphericalModelTable::dfc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="345" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="345" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int SphericalModelTable::diverge</definition>
-        <argsstring></argsstring>
-        <name>diverge</name>
-        <qualifiedname>SphericalModelTable::diverge</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="352" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="352" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_spherical_model_table_1a3121d2c8a918e71300b4d66e9b6bd0e8" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphericalModelTable::diverge_rfac</definition>
-        <argsstring></argsstring>
-        <name>diverge_rfac</name>
-        <qualifiedname>SphericalModelTable::diverge_rfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="350" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="350" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int SphericalModelTable::external</definition>
-        <argsstring></argsstring>
-        <name>external</name>
-        <qualifiedname>SphericalModelTable::external</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="353" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="353" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double SphericalModelTable::foffset</definition>
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-        <name>foffset</name>
-        <qualifiedname>SphericalModelTable::foffset</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="351" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="351" bodyend="-1"/>
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-        <type><ref refid="class_r_u_n" kindref="compound">RUN</ref></type>
-        <definition>RUN SphericalModelTable::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>SphericalModelTable::mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="341" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="341" bodyend="-1"/>
-        <referencedby refid="class_spherical_model_table_1aec09ce7a1f0e60f3ff5f7d98788043d4" compoundref="massmodel_8_h" startline="414" endline="414">get_max_radius</referencedby>
-        <referencedby refid="class_spherical_model_table_1a933d3a41d014192bd4743fb9baacded8" compoundref="massmodel_8_h" startline="413" endline="413">get_min_radius</referencedby>
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-        <type>int</type>
-        <definition>int SphericalModelTable::num</definition>
-        <argsstring></argsstring>
-        <name>num</name>
-        <qualifiedname>SphericalModelTable::num</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="346" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="346" bodyend="-1"/>
-        <referencedby refid="class_spherical_model_table_1ad33d2c931984a66dfd21f0d3545b93c5" compoundref="massmodel_8_h" startline="415" endline="415">grid_size</referencedby>
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-        <type>int</type>
-        <definition>int SphericalModelTable::num_params</definition>
-        <argsstring></argsstring>
-        <name>num_params</name>
-        <qualifiedname>SphericalModelTable::num_params</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="348" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="348" bodyend="-1"/>
-        <referencedby refid="class_spherical_model_table_1a1b4626374991cd7f54ef456ce332bdf0" compoundref="massmodel_8_h" startline="410" endline="410">get_num_param</referencedby>
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-        <type>int</type>
-        <definition>int SphericalModelTable::numdf</definition>
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-        <name>numdf</name>
-        <qualifiedname>SphericalModelTable::numdf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="347" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="347" bodyend="-1"/>
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; SphericalModelTable::params</definition>
-        <argsstring></argsstring>
-        <name>params</name>
-        <qualifiedname>SphericalModelTable::params</qualifiedname>
-        <briefdescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="349" column="15" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="349" bodyend="-1"/>
-        <referencedby refid="class_spherical_model_table_1ac4c388ba456e4c438acbefef584d7812" compoundref="massmodel_8_h" startline="411" endline="411">get_param</referencedby>
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-        <definition>RUN SphericalModelTable::pot</definition>
-        <argsstring></argsstring>
-        <name>pot</name>
-        <qualifiedname>SphericalModelTable::pot</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="343" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="343" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int SphericalModelTable::chebyN</definition>
-        <argsstring></argsstring>
-        <name>chebyN</name>
-        <qualifiedname>SphericalModelTable::chebyN</qualifiedname>
-        <briefdescription>
-<para>Chebyshev order (default: 0, no Chebyshev) </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="366" column="14" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="366" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int SphericalModelTable::count</definition>
-        <argsstring></argsstring>
-        <name>count</name>
-        <qualifiedname>SphericalModelTable::count</qualifiedname>
-        <briefdescription>
-<para>Count the number of instantiations (for debugging) </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="360" column="14" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="360" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int SphericalModelTable::even</definition>
-        <argsstring></argsstring>
-        <name>even</name>
-        <qualifiedname>SphericalModelTable::even</qualifiedname>
-        <briefdescription>
-<para>Assume even spacing in the mass model table (default: yes) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="363" column="14" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="363" bodyend="-1"/>
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-        <definition>int SphericalModelTable::linear</definition>
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-        <name>linear</name>
-        <qualifiedname>SphericalModelTable::linear</qualifiedname>
-        <briefdescription>
-<para>Linear interpolation in model (default: no) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="369" column="14" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="369" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void SphericalModelTable::debug_fdist</definition>
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-        <name>debug_fdist</name>
-        <qualifiedname>SphericalModelTable::debug_fdist</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="355" column="8"/>
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-        <type>double</type>
-        <definition>double SphericalModelTable::d2fde2</definition>
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-        <name>d2fde2</name>
-        <qualifiedname>SphericalModelTable::d2fde2</qualifiedname>
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-        <param>
-          <type>double</type>
-          <declname>L</declname>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="432" column="10"/>
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-        <type>double</type>
-        <definition>double SphericalModelTable::dfde</definition>
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-        <name>dfde</name>
-        <qualifiedname>SphericalModelTable::dfde</qualifiedname>
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-        <param>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="430" column="10"/>
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-        <type>double</type>
-        <definition>double SphericalModelTable::dfdl</definition>
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-        <name>dfdl</name>
-        <qualifiedname>SphericalModelTable::dfdl</qualifiedname>
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-        <param>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="431" column="10"/>
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-        <type>double</type>
-        <definition>double SphericalModelTable::distf</definition>
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-        <name>distf</name>
-        <qualifiedname>SphericalModelTable::distf</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a5530c3612f1c09c6c77401a9e21550b8">distf</reimplements>
-        <param>
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-        <param>
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-<para>Evaluate the distribution function. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="429" column="10"/>
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-        <type>double</type>
-        <definition>double SphericalModelTable::get_density</definition>
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-        <name>get_density</name>
-        <qualifiedname>SphericalModelTable::get_density</qualifiedname>
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-        <param>
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-        <param>
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-<para>The density at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="401" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="401" bodyend="402"/>
-        <references refid="class_spherical_model_table_1a33ef4146cea85ef88bb6ff81b1410384">get_density</references>
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-        <type>double</type>
-        <definition>virtual double SphericalModelTable::get_density</definition>
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-        <name>get_density</name>
-        <qualifiedname>SphericalModelTable::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</reimplements>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="392" column="18"/>
-        <referencedby refid="class_spherical_model_table_1a2e8fbb9f875f6f5a02349ef4af6589db" compoundref="massmodel_8_h" startline="401" endline="402">get_density</referencedby>
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-        <type>double</type>
-        <definition>virtual double SphericalModelTable::get_dpot</definition>
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-        <name>get_dpot</name>
-        <qualifiedname>SphericalModelTable::get_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845">get_dpot</reimplements>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="394" column="18"/>
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-        <type>double</type>
-        <definition>virtual double SphericalModelTable::get_dpot2</definition>
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-        <name>get_dpot2</name>
-        <qualifiedname>SphericalModelTable::get_dpot2</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="395" column="18"/>
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-        <type>double</type>
-        <definition>double SphericalModelTable::get_mass</definition>
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-        <name>get_mass</name>
-        <qualifiedname>SphericalModelTable::get_mass</qualifiedname>
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-        <param>
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-        <param>
-          <type>const double</type>
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-        <param>
-          <type>const double</type>
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-        <briefdescription>
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-        <detaileddescription>
-<para>Get the mass inside of position (x, y, z) (this is ambiguous in general and will depend on the model) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="398" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="398" bodyend="399"/>
-        <references refid="class_spherical_model_table_1ab1ab4823de33209caba74cf2aa12c0d9">get_mass</references>
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-        <type>double</type>
-        <definition>virtual double SphericalModelTable::get_mass</definition>
-        <argsstring>(const double)</argsstring>
-        <name>get_mass</name>
-        <qualifiedname>SphericalModelTable::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465">get_mass</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>Evaluate the profile at a particular radius. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="391" column="18"/>
-        <referencedby refid="class_spherical_model_table_1a61db5a62762d085aaba14e2c6e49eac7" compoundref="massmodel_8_h" startline="398" endline="399">get_mass</referencedby>
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-      <memberdef kind="function" id="class_spherical_model_table_1aec09ce7a1f0e60f3ff5f7d98788043d4" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelTable::get_max_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_max_radius</name>
-        <qualifiedname>SphericalModelTable::get_max_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a87510a095e6b9533812eba57c7ca862c">get_max_radius</reimplements>
-        <param>
-          <type>void</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="414" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="414" bodyend="414"/>
-        <references refid="class_spherical_model_table_1aa7d54607df40c72e98060edf9e8bd592" compoundref="massmodel_8_h" startline="341">mass</references>
-        <references refid="class_r_u_n_1ab7530cfee3955f1a9f1deb497a83b1da" compoundref="massmodel_8_h" startline="22">RUN::num</references>
-        <references refid="class_r_u_n_1a76f53056d68ccd55c6e525cc4da63851" compoundref="massmodel_8_h" startline="19">RUN::x</references>
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-        <type>double</type>
-        <definition>double SphericalModelTable::get_min_radius</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_min_radius</name>
-        <qualifiedname>SphericalModelTable::get_min_radius</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1ab304897a450a2d79f4e27841526b70e9">get_min_radius</reimplements>
-        <param>
-          <type>void</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="413" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="413" bodyend="413"/>
-        <references refid="class_spherical_model_table_1aa7d54607df40c72e98060edf9e8bd592" compoundref="massmodel_8_h" startline="341">mass</references>
-        <references refid="class_r_u_n_1a76f53056d68ccd55c6e525cc4da63851" compoundref="massmodel_8_h" startline="19">RUN::x</references>
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-      <memberdef kind="function" id="class_spherical_model_table_1a1b4626374991cd7f54ef456ce332bdf0" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int SphericalModelTable::get_num_param</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_num_param</name>
-        <qualifiedname>SphericalModelTable::get_num_param</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Get info about the model. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="410" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="410" bodyend="410"/>
-        <references refid="class_spherical_model_table_1af6b77bb08fabe2b78c5c74f8ce0d2cdb" compoundref="massmodel_8_h" startline="348">num_params</references>
-        <referencedby refid="class_king_sphere_1a0b59261568d6888256e1cc8a18be578b" compoundref="king_8_h" startline="18" endline="23">KingSphere::setup_df</referencedby>
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-        <type>double</type>
-        <definition>double SphericalModelTable::get_param</definition>
-        <argsstring>(int i)</argsstring>
-        <name>get_param</name>
-        <qualifiedname>SphericalModelTable::get_param</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="411" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="411" bodyend="411"/>
-        <references refid="class_spherical_model_table_1a25714d81a0fbca9e2a873931d960453e" compoundref="massmodel_8_h" startline="349">params</references>
-        <referencedby refid="class_king_sphere_1a0b59261568d6888256e1cc8a18be578b" compoundref="king_8_h" startline="18" endline="23">KingSphere::setup_df</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_model_table_1a8070023a8858287d4cb5e50a66d64043" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalModelTable::get_pot</definition>
-        <argsstring>(const double x1, const double x2, const double x3)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SphericalModelTable::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-<para>The potential at (x, y, z) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="404" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="404" bodyend="405"/>
-        <references refid="class_spherical_model_table_1a0f56dc4e85e41f26fd1e5451043efb98">get_pot</references>
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-      <memberdef kind="function" id="class_spherical_model_table_1a0f56dc4e85e41f26fd1e5451043efb98" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>virtual double SphericalModelTable::get_pot</definition>
-        <argsstring>(const double)</argsstring>
-        <name>get_pot</name>
-        <qualifiedname>SphericalModelTable::get_pot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="393" column="18"/>
-        <referencedby refid="class_spherical_model_table_1a8070023a8858287d4cb5e50a66d64043" compoundref="massmodel_8_h" startline="404" endline="405">get_pot</referencedby>
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-        <type>void</type>
-        <definition>virtual void SphericalModelTable::get_pot_dpot</definition>
-        <argsstring>(const double, double &amp;, double &amp;)</argsstring>
-        <name>get_pot_dpot</name>
-        <qualifiedname>SphericalModelTable::get_pot_dpot</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a4fc766458a1f45b3ece0410b2c85b632">get_pot_dpot</reimplements>
-        <param>
-          <type>const double</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="396" column="18"/>
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-      <memberdef kind="function" id="class_spherical_model_table_1a11344205c811bc5cf508d30ee227a9aa" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphericalModelTable::get_ra2</definition>
-        <argsstring>(void)</argsstring>
-        <name>get_ra2</name>
-        <qualifiedname>SphericalModelTable::get_ra2</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="424" column="10" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="424" bodyend="424"/>
-        <references refid="class_spherical_model_table_1a55ab5d0206ae4acb7dd7a311536c817f" compoundref="massmodel_8_h" startline="344">df</references>
-        <references refid="class_f_d_i_s_t_1a0f18cde66e0010eb9be0b232a5fbbce2" compoundref="massmodel_8_h" startline="45">FDIST::ra2</references>
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-        <type>int</type>
-        <definition>int SphericalModelTable::grid_size</definition>
-        <argsstring>(void)</argsstring>
-        <name>grid_size</name>
-        <qualifiedname>SphericalModelTable::grid_size</qualifiedname>
-        <param>
-          <type>void</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="415" column="7" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="415" bodyend="415"/>
-        <references refid="class_spherical_model_table_1a0f5240d6b744d914a4883b27a18d94b3" compoundref="massmodel_8_h" startline="346">num</references>
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-        <type>void</type>
-        <definition>void SphericalModelTable::print_df</definition>
-        <argsstring>(const std::string &amp;name)</argsstring>
-        <name>print_df</name>
-        <qualifiedname>SphericalModelTable::print_df</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="423" column="8"/>
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-        <type>void</type>
-        <definition>void SphericalModelTable::print_model</definition>
-        <argsstring>(const std::string &amp;name)</argsstring>
-        <name>print_model</name>
-        <qualifiedname>SphericalModelTable::print_model</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="416" column="8"/>
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-        <type>void</type>
-        <definition>void SphericalModelTable::print_model_eval</definition>
-        <argsstring>(const std::string &amp;name, int number)</argsstring>
-        <name>print_model_eval</name>
-        <qualifiedname>SphericalModelTable::print_model_eval</qualifiedname>
-        <param>
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-          <declname>name</declname>
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-        <param>
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-          <declname>number</declname>
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-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="417" column="8"/>
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-        <type>void</type>
-        <definition>void SphericalModelTable::setup_df</definition>
-        <argsstring>(int NUM, double RA=1.0e20)</argsstring>
-        <name>setup_df</name>
-        <qualifiedname>SphericalModelTable::setup_df</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>NUM</declname>
-        </param>
-        <param>
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-          <declname>RA</declname>
-          <defval>1.0e20</defval>
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-        <briefdescription>
-<para>Set up and get info about the phase-space distribution. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="422" column="8"/>
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-        <type></type>
-        <definition>SphericalModelTable::SphericalModelTable</definition>
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-        <name>SphericalModelTable</name>
-        <qualifiedname>SphericalModelTable::SphericalModelTable</qualifiedname>
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-        <param>
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-        <param>
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-        <param>
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-        <param>
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-        <param>
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-          <defval>0</defval>
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-        <param>
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-          <defval>0</defval>
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-          <defval>0</defval>
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-        <param>
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-          <defval>&quot;&quot;</defval>
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-<para>Constructor (from array pointers) </para>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="376" column="3"/>
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-        <type></type>
-        <definition>SphericalModelTable::SphericalModelTable</definition>
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-        <name>SphericalModelTable</name>
-        <qualifiedname>SphericalModelTable::SphericalModelTable</qualifiedname>
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-        <param>
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-        <param>
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-          <declname>p</declname>
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-        <param>
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-          <defval>0</defval>
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-        <param>
-          <type>double</type>
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-          <defval>0</defval>
-        </param>
-        <param>
-          <type>int</type>
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-          <defval>0</defval>
-        </param>
-        <param>
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-<para>Constructor (from vectors) </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="381" column="3"/>
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-        <type></type>
-        <definition>SphericalModelTable::SphericalModelTable</definition>
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-        <name>SphericalModelTable</name>
-        <qualifiedname>SphericalModelTable::SphericalModelTable</qualifiedname>
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-          <type>string</type>
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-        <param>
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-<para>Constructor (from a table) </para>
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-        <type></type>
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-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
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-    <briefdescription>
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-    <detaileddescription>
-<para>Describe a spherical model from a four-column table of radius, density, enclosed mass, and gravitational potential</para>
-<para>The file may have any number of leading comment lines, any line that starts with a &quot;!&quot; or a &quot;#&quot;. The first non-comment record is assumed to be an integer containing the number of lines. The subseuqnet lines are assumed to be records beginning the radius and followed by the triple of (density, enclosed mass, gravitational potential). <linebreak/>
- </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
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-      <member refid="class_axi_sym_model_1ac9a6c290463cfe45d95656d37c0c45f8" prot="public" virt="virtual"><scope>SphericalModelTable</scope><name>~AxiSymModel</name></member>
-      <member refid="class_mass_model_1a95c0338ca07d1b2ea284c3c2605dc9b8" prot="public" virt="virtual"><scope>SphericalModelTable</scope><name>~MassModel</name></member>
-      <member refid="class_spherical_model_table_1a1aef10b60c3dc458d41aa32c94dc5cd2" prot="public" virt="virtual"><scope>SphericalModelTable</scope><name>~SphericalModelTable</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_spherical_orbit.xml b/doxyxml/class_spherical_orbit.xml
deleted file mode 100644
index 7f76de7..0000000
--- a/doxyxml/class_spherical_orbit.xml
+++ /dev/null
@@ -1,1334 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_spherical_orbit" kind="class" language="C++" prot="public">
-    <compoundname>SphericalOrbit</compoundname>
-    <basecompoundref refid="class_regular_orbit" prot="public" virt="non-virtual">RegularOrbit</basecompoundref>
-    <includes refid="orbit_8_h" local="no">orbit.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_spherical_orbit_1a9c8d85b92b505ce05abb9f3138247cc7" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphericalOrbit::am</definition>
-        <argsstring></argsstring>
-        <name>am</name>
-        <qualifiedname>SphericalOrbit::am</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="63" column="13" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="63" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_orbit_1a24d27c2c0fd8f7c505967405e2024bc3" prot="private" static="no" mutable="no">
-        <type>struct <ref refid="struct_a_n_g_l_e___g_r_i_d" kindref="compound">ANGLE_GRID</ref></type>
-        <definition>struct ANGLE_GRID SphericalOrbit::angle_grid</definition>
-        <argsstring></argsstring>
-        <name>angle_grid</name>
-        <qualifiedname>SphericalOrbit::angle_grid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="77" column="19" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="77" bodyend="-1"/>
-        <referencedby refid="class_spherical_orbit_1a6bcdf37f55f92a208b16b22a39c6140b" compoundref="orbit_8_h" startline="191" endline="196">get_angle_grid</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_orbit_1af39c49b836eeb1ce0614f7ea6e8b211a" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphericalOrbit::ap</definition>
-        <argsstring></argsstring>
-        <name>ap</name>
-        <qualifiedname>SphericalOrbit::ap</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="63" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="63" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_orbit_1aa913defb5be85150e1336f2477b153f4" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphericalOrbit::beta</definition>
-        <argsstring></argsstring>
-        <name>beta</name>
-        <qualifiedname>SphericalOrbit::beta</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="57" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="57" bodyend="-1"/>
-        <referencedby refid="class_spherical_orbit_1a974b256df68772b882efba91c4e82e1d" compoundref="orbit_8_h" startline="222" endline="222">Beta</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_orbit_1aac77ad858f708436e2e55c6f0f3afc72" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;AxiSymBiorth&gt; SphericalOrbit::biorth</definition>
-        <argsstring></argsstring>
-        <name>biorth</name>
-        <qualifiedname>SphericalOrbit::biorth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="66" column="19" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="66" bodyend="-1"/>
-        <referencedby refid="class_spherical_orbit_1abdd93142e78fd3e54c2bb3a15b330083" compoundref="orbit_8_h" startline="249" endline="249">orth</referencedby>
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-      <memberdef kind="variable" id="class_spherical_orbit_1a888c8723e845c0fd350e5139ba85c5dc" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd SphericalOrbit::cosvec</definition>
-        <argsstring></argsstring>
-        <name>cosvec</name>
-        <qualifiedname>SphericalOrbit::cosvec</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="84" column="19" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="84" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_spherical_orbit_1a048facb564d4478c59807275c78adc07" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphericalOrbit::energy</definition>
-        <argsstring></argsstring>
-        <name>energy</name>
-        <qualifiedname>SphericalOrbit::energy</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="55" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="55" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>Gkn</name>
-        <qualifiedname>SphericalOrbit::Gkn</qualifiedname>
-        <briefdescription>
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-        <definition>double SphericalOrbit::jmax</definition>
-        <argsstring></argsstring>
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-        <qualifiedname>SphericalOrbit::jmax</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="59" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="59" bodyend="-1"/>
-        <referencedby refid="class_spherical_orbit_1a448149f2cf5ef12ff9771c3021022cfe" compoundref="orbit_8_h" startline="205" endline="209">AngMom</referencedby>
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-      </memberdef>
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-        <type>double</type>
-        <definition>double SphericalOrbit::kappa</definition>
-        <argsstring></argsstring>
-        <name>kappa</name>
-        <qualifiedname>SphericalOrbit::kappa</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="56" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="56" bodyend="-1"/>
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-      </memberdef>
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-        <definition>int SphericalOrbit::l</definition>
-        <argsstring></argsstring>
-        <name>l</name>
-        <qualifiedname>SphericalOrbit::l</qualifiedname>
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-        <definition>int SphericalOrbit::l1s</definition>
-        <argsstring></argsstring>
-        <name>l1s</name>
-        <qualifiedname>SphericalOrbit::l1s</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="83" column="7" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="83" bodyend="-1"/>
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-        <definition>int SphericalOrbit::l2s</definition>
-        <argsstring></argsstring>
-        <name>l2s</name>
-        <qualifiedname>SphericalOrbit::l2s</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="83" column="11" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="83" bodyend="-1"/>
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-        <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;AxiSymModel&gt; SphericalOrbit::model</definition>
-        <argsstring></argsstring>
-        <name>model</name>
-        <qualifiedname>SphericalOrbit::model</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="65" column="20" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="65" bodyend="-1"/>
-        <referencedby refid="class_spherical_orbit_1a9596a836db3b865814d644b5fa8f2cc2" compoundref="orbit_8_h" startline="246" endline="246">modl</referencedby>
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-        <qualifiedname>SphericalOrbit::nbsct</qualifiedname>
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-        <qualifiedname>SphericalOrbit::Nseg</qualifiedname>
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-        <type>double</type>
-        <definition>double SphericalOrbit::RMAXF</definition>
-        <argsstring></argsstring>
-        <name>RMAXF</name>
-        <qualifiedname>SphericalOrbit::RMAXF</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type>double</type>
-        <definition>double SphericalOrbit::tol</definition>
-        <argsstring></argsstring>
-        <name>tol</name>
-        <qualifiedname>SphericalOrbit::tol</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type>double</type>
-        <definition>double SphericalOrbit::tolnr</definition>
-        <argsstring></argsstring>
-        <name>tolnr</name>
-        <qualifiedname>SphericalOrbit::tolnr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        </inbodydescription>
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-        <type>double</type>
-        <definition>double SphericalOrbit::ZFRAC</definition>
-        <argsstring></argsstring>
-        <name>ZFRAC</name>
-        <qualifiedname>SphericalOrbit::ZFRAC</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="100" column="17" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="100" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void SphericalOrbit::compute_action</definition>
-        <argsstring>(void)</argsstring>
-        <name>compute_action</name>
-        <qualifiedname>SphericalOrbit::compute_action</qualifiedname>
-        <param>
-          <type>void</type>
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-        <references refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839">compute_freq</references>
-        <referencedby refid="class_spherical_orbit_1a1d4224e324c4b8884ce49799c9c6398a" compoundref="orbit_8_h" startline="131" endline="138">get_action</referencedby>
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-        <type>void</type>
-        <definition>void SphericalOrbit::compute_angles</definition>
-        <argsstring>(void)</argsstring>
-        <name>compute_angles</name>
-        <qualifiedname>SphericalOrbit::compute_angles</qualifiedname>
-        <param>
-          <type>void</type>
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-        <referencedby refid="class_spherical_orbit_1a6bcdf37f55f92a208b16b22a39c6140b" compoundref="orbit_8_h" startline="191" endline="196">get_angle_grid</referencedby>
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-        <type>void</type>
-        <definition>void SphericalOrbit::compute_angles_epi</definition>
-        <argsstring>(void)</argsstring>
-        <name>compute_angles_epi</name>
-        <qualifiedname>SphericalOrbit::compute_angles_epi</qualifiedname>
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-        <type>void</type>
-        <definition>void SphericalOrbit::compute_angles_old</definition>
-        <argsstring>(void)</argsstring>
-        <name>compute_angles_old</name>
-        <qualifiedname>SphericalOrbit::compute_angles_old</qualifiedname>
-        <param>
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-        <type>void</type>
-        <definition>void SphericalOrbit::compute_biorth</definition>
-        <argsstring>(void)</argsstring>
-        <name>compute_biorth</name>
-        <qualifiedname>SphericalOrbit::compute_biorth</qualifiedname>
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-        <type>void</type>
-        <definition>void SphericalOrbit::compute_freq</definition>
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-        <referencedby refid="class_spherical_orbit_1a448149f2cf5ef12ff9771c3021022cfe" compoundref="orbit_8_h" startline="205" endline="209">AngMom</referencedby>
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-        <referencedby refid="class_spherical_orbit_1a7045fa0c5a89883c41487ecb6730fa88" compoundref="orbit_8_h" startline="148" endline="155">get_freq</referencedby>
-        <referencedby refid="class_spherical_orbit_1a56729c1aaf0a9f12f559a7f5058fa238" compoundref="orbit_8_h" startline="212" endline="216">Jmax</referencedby>
-        <referencedby refid="class_spherical_orbit_1a7df6bd5832dd7945fc5e1973de218dfe" compoundref="orbit_8_h" startline="225" endline="229">peri</referencedby>
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-        <type>void</type>
-        <definition>void SphericalOrbit::compute_freq_epi</definition>
-        <argsstring>(void)</argsstring>
-        <name>compute_freq_epi</name>
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-        <type>std::tuple&lt; double, double, bool &gt;</type>
-        <definition>std::tuple&lt; double, double, bool &gt; SphericalOrbit::search</definition>
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-        <name>search</name>
-        <qualifiedname>SphericalOrbit::search</qualifiedname>
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-        <param>
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-        <type>double</type>
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-        <name>AngMom</name>
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-<para>The value of the orbital angular momentum. </para>
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-<para>Radius of the apocenter of this orbit. </para>
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-<para>The specified altitude of the orbital plane. </para>
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-<para>Radius of the circular orbit with energy E. </para>
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-<para>The value of the orbital energy </para>
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-<para>Get angle dependent quantities for the orbit where the index signifies:</para>
-<para>i val <hruler/>
- 1 w1 2 w2 3 t 4 dw1dt 5 f 6 r 7 phi </para>
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-<para>Access to underlying grid for pot_trans. </para>
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-        <references refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" compoundref="orbit_8_h" startline="21">RegularOrbit::freq_defined</references>
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-      <memberdef kind="function" id="class_spherical_orbit_1a7045fa0c5a89883c41487ecb6730fa88" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double SphericalOrbit::get_freq</definition>
-        <argsstring>(const int i)</argsstring>
-        <name>get_freq</name>
-        <qualifiedname>SphericalOrbit::get_freq</qualifiedname>
-        <reimplements refid="class_regular_orbit_1a9a65442827224e08daf0d2b06e49cbcb">get_freq</reimplements>
-        <param>
-          <type>const int</type>
-          <declname>i</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Return the orbital frequency where: index 0 is radial frequency, I_r index 1 is angular frequency, J index 2 is frequency of line of nodes (zero for a spherical system) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="148" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="148" bodyend="155"/>
-        <references refid="class_regular_orbit_1aa563a76703ed65bacc1d91b3bb8d453f">RegularOrbit::bomb</references>
-        <references refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839">compute_freq</references>
-        <references refid="class_regular_orbit_1a6d582e67d7baeece1ffc2e75a8ccaaf3" compoundref="orbit_8_h" startline="16">RegularOrbit::dof</references>
-        <references refid="class_regular_orbit_1aa2af630a8524ec47bc107215fc493aa9" compoundref="orbit_8_h" startline="25">RegularOrbit::freq</references>
-        <references refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" compoundref="orbit_8_h" startline="21">RegularOrbit::freq_defined</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1a71a90f4040edee317a91cc5fde9b6520" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphericalOrbit::get_w1</definition>
-        <argsstring>(double r, double vr)</argsstring>
-        <name>get_w1</name>
-        <qualifiedname>SphericalOrbit::get_w1</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>vr</declname>
-        </param>
-        <briefdescription>
-<para>Get radial angle for a given radius. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="141" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1a56729c1aaf0a9f12f559a7f5058fa238" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphericalOrbit::Jmax</definition>
-        <argsstring>(void)</argsstring>
-        <name>Jmax</name>
-        <qualifiedname>SphericalOrbit::Jmax</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>The value of the current J_{max}(E) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="212" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="212" bodyend="216"/>
-        <references refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839">compute_freq</references>
-        <references refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" compoundref="orbit_8_h" startline="21">RegularOrbit::freq_defined</references>
-        <references refid="class_spherical_orbit_1a9829f848d1f29edcb804198552ef9b32" compoundref="orbit_8_h" startline="59">jmax</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1a1429e6d175fe830d9be837c305f6bf83" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphericalOrbit::Kappa</definition>
-        <argsstring>(void)</argsstring>
-        <name>Kappa</name>
-        <qualifiedname>SphericalOrbit::Kappa</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>The value of the current J/J_{max}(E) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="219" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="219" bodyend="219"/>
-        <references refid="class_spherical_orbit_1a2042d55bdd18f72ec73e731c6308fde2" compoundref="orbit_8_h" startline="56">kappa</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1a9596a836db3b865814d644b5fa8f2cc2" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &amp;</type>
-        <definition>AxiSymModel &amp; SphericalOrbit::modl</definition>
-        <argsstring>(void)</argsstring>
-        <name>modl</name>
-        <qualifiedname>SphericalOrbit::modl</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Get the underlying axisymmetric model object. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="246" column="15" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="246" bodyend="246"/>
-        <references refid="class_spherical_orbit_1a26c403b5b97d88adfbac1a4ebca2d454" compoundref="orbit_8_h" startline="65">model</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1a4b0a36c39baf45a551c57e485303a0d9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalOrbit::new_orbit</definition>
-        <argsstring>(double Energy, double kappa, double beta=0.0)</argsstring>
-        <name>new_orbit</name>
-        <qualifiedname>SphericalOrbit::new_orbit</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>Energy</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>kappa</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>beta</declname>
-          <defval>0.0</defval>
-        </param>
-        <briefdescription>
-<para>Set the energy and kappa for the orbit. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="174" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1ae2322f082b81c2456011c2dcfe04258b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref> &amp;</type>
-        <definition>SphericalOrbit &amp; SphericalOrbit::operator=</definition>
-        <argsstring>(const SphericalOrbit &amp;)</argsstring>
-        <name>operator=</name>
-        <qualifiedname>SphericalOrbit::operator=</qualifiedname>
-        <param>
-          <type>const <ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref> &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="121" column="18"/>
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-      <memberdef kind="function" id="class_spherical_orbit_1abdd93142e78fd3e54c2bb3a15b330083" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref> &amp;</type>
-        <definition>AxiSymBiorth &amp; SphericalOrbit::orth</definition>
-        <argsstring>(void)</argsstring>
-        <name>orth</name>
-        <qualifiedname>SphericalOrbit::orth</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Get the underlying biorthogonal function object. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="249" column="16" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="249" bodyend="249"/>
-        <references refid="class_spherical_orbit_1aac77ad858f708436e2e55c6f0f3afc72" compoundref="orbit_8_h" startline="66">biorth</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1a7df6bd5832dd7945fc5e1973de218dfe" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphericalOrbit::peri</definition>
-        <argsstring>(void)</argsstring>
-        <name>peri</name>
-        <qualifiedname>SphericalOrbit::peri</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Radius of the pericenter of this orbit. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="225" column="10" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="225" bodyend="229"/>
-        <references refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839">compute_freq</references>
-        <references refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" compoundref="orbit_8_h" startline="21">RegularOrbit::freq_defined</references>
-        <references refid="class_spherical_orbit_1a7a08299d1a534f4e1f9328e4724d5c5d" compoundref="orbit_8_h" startline="60">r_peri</references>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1a738751098aa6d2245d58cdb1bd5a93ca" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalOrbit::pot_trans</definition>
-        <argsstring>(int l1, int l2, Eigen::VectorXd &amp;t)</argsstring>
-        <name>pot_trans</name>
-        <qualifiedname>SphericalOrbit::pot_trans</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l1</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l2</declname>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-          <declname>t</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="188" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spherical_orbit_1a295374e8f807a373d2cc8cc285036518" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphericalOrbit::pot_trans</definition>
-        <argsstring>(int l1, int l2, int n)</argsstring>
-        <name>pot_trans</name>
-        <qualifiedname>SphericalOrbit::pot_trans</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l1</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l2</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="187" column="10"/>
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-      <memberdef kind="function" id="class_spherical_orbit_1aaa0c762462f069f9452ce0889d919767" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double SphericalOrbit::pot_trans</definition>
-        <argsstring>(int l1, int l2, std::function&lt; double(double)&gt; func)</argsstring>
-        <name>pot_trans</name>
-        <qualifiedname>SphericalOrbit::pot_trans</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>l1</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l2</declname>
-        </param>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-          <declname>func</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="186" column="10"/>
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-      <memberdef kind="function" id="class_spherical_orbit_1a7b66fc5ad316212f4b869fbd8ab5837b" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void SphericalOrbit::set_biorth</definition>
-        <argsstring>(std::shared_ptr&lt; AxiSymBiorth &gt; type, int ll, int max, int recur=0)</argsstring>
-        <name>set_biorth</name>
-        <qualifiedname>SphericalOrbit::set_biorth</qualifiedname>
-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref> &gt;</type>
-          <declname>type</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ll</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>max</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>recur</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-<para>Set the biorthogonal ffunction type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="177" column="8" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="177" bodyend="180"/>
-        <references refid="class_spherical_orbit_1aac77ad858f708436e2e55c6f0f3afc72" compoundref="orbit_8_h" startline="66">biorth</references>
-        <references refid="class_regular_orbit_1ac082d931f0738f9376037c63b462c7a9" compoundref="orbit_8_h" startline="23">RegularOrbit::biorth_defined</references>
-        <references refid="class_spherical_orbit_1a0d8e941e8488e6926c2f9c979dba823b" compoundref="orbit_8_h" startline="82">l</references>
-        <references refid="class_spherical_orbit_1a9fd120d1821294d7d0295c613ff56f20" compoundref="orbit_8_h" startline="79">nmax</references>
-        <references refid="class_spherical_orbit_1a3cd45894a025e1a8a7c957e711943049" compoundref="orbit_8_h" startline="67">RECUR</references>
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-        <type>void</type>
-        <definition>void SphericalOrbit::set_numerical_params</definition>
-        <argsstring>(int RECS=64, int NMAX=40, int NBSCT=3)</argsstring>
-        <name>set_numerical_params</name>
-        <qualifiedname>SphericalOrbit::set_numerical_params</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>RECS</declname>
-          <defval>64</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>NMAX</declname>
-          <defval>40</defval>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>NBSCT</declname>
-          <defval>3</defval>
-        </param>
-        <briefdescription>
-<para>Set the numerical parameters for angle transform computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="183" column="8" bodyfile="/home/weinberg/Projects/EXP/include/orbit.H" bodystart="183" bodyend="184"/>
-        <references refid="class_spherical_orbit_1aa38fbb17ffcbda5f74811be5f4683240" compoundref="orbit_8_h" startline="80">nbsct</references>
-        <references refid="class_spherical_orbit_1a9fd120d1821294d7d0295c613ff56f20" compoundref="orbit_8_h" startline="79">nmax</references>
-        <references refid="class_spherical_orbit_1af48acd1046a742a5b866dce6a97cb591" compoundref="orbit_8_h" startline="78">recs</references>
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-        <type></type>
-        <definition>SphericalOrbit::SphericalOrbit</definition>
-        <argsstring>(const SphericalOrbit &amp;)</argsstring>
-        <name>SphericalOrbit</name>
-        <qualifiedname>SphericalOrbit::SphericalOrbit</qualifiedname>
-        <param>
-          <type>const <ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref> &amp;</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="120" column="3"/>
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-      <memberdef kind="function" id="class_spherical_orbit_1a45da5ecee2f38fabe8722ecc3f23fe31" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>SphericalOrbit::SphericalOrbit</definition>
-        <argsstring>(std::shared_ptr&lt; AxiSymModel &gt; model)</argsstring>
-        <name>SphericalOrbit</name>
-        <qualifiedname>SphericalOrbit::SphericalOrbit</qualifiedname>
-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="114" column="3"/>
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-        <type></type>
-        <definition>SphericalOrbit::SphericalOrbit</definition>
-        <argsstring>(std::shared_ptr&lt; AxiSymModel &gt; model, double Energy, double kappa, double beta=0.0)</argsstring>
-        <name>SphericalOrbit</name>
-        <qualifiedname>SphericalOrbit::SphericalOrbit</qualifiedname>
-        <param>
-          <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-          <declname>model</declname>
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-        <param>
-          <type>double</type>
-          <declname>Energy</declname>
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-        <param>
-          <type>double</type>
-          <declname>kappa</declname>
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-        <param>
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-          <defval>0.0</defval>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/orbit.H" line="115" column="3"/>
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-        <definition>SphericalOrbit::SphericalOrbit</definition>
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-        <name>SphericalOrbit</name>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <definition>virtual SphericalOrbit::~SphericalOrbit</definition>
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-        </inbodydescription>
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-      <member refid="class_spherical_orbit_1a71a90f4040edee317a91cc5fde9b6520" prot="public" virt="non-virtual"><scope>SphericalOrbit</scope><name>get_w1</name></member>
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-      <member refid="class_spherical_orbit_1aa9f4e01668d17d3bd2074e6f5a63bd78" prot="private" virt="non-virtual"><scope>SphericalOrbit</scope><name>l1s</name></member>
-      <member refid="class_spherical_orbit_1ab7a7e6caeb9cc6067b5e970d06ee274e" prot="private" virt="non-virtual"><scope>SphericalOrbit</scope><name>l2s</name></member>
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diff --git a/doxyxml/class_spherical_s_l.xml b/doxyxml/class_spherical_s_l.xml
deleted file mode 100644
index b4f7b0c..0000000
--- a/doxyxml/class_spherical_s_l.xml
+++ /dev/null
@@ -1,1145 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_spherical_s_l" kind="class" language="C++" prot="public">
-    <compoundname>SphericalSL</compoundname>
-    <includes refid="_spherical_s_l_8_h" local="no">SphericalSL.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_spherical_s_l_1ab9c7c5c049db19e357d6631dc70b2b4e" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; SphericalSL::cc</definition>
-        <argsstring></argsstring>
-        <name>cc</name>
-        <qualifiedname>SphericalSL::cc</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="21" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="21" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spherical_s_l_1ab9002cf1895d5f730a6568f63a2b6cd0" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; std::vector&lt; Eigen::MatrixXd &gt; &gt;</type>
-        <definition>std::vector&lt;std::vector&lt;Eigen::MatrixXd&gt; &gt; SphericalSL::cc1</definition>
-        <argsstring></argsstring>
-        <name>cc1</name>
-        <qualifiedname>SphericalSL::cc1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="23" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="23" bodyend="-1"/>
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-        <definition>bool SphericalSL::coefs_made</definition>
-        <argsstring></argsstring>
-        <name>coefs_made</name>
-        <qualifiedname>SphericalSL::coefs_made</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="30" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="30" bodyend="-1"/>
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-        <definition>int SphericalSL::compute</definition>
-        <argsstring></argsstring>
-        <name>compute</name>
-        <qualifiedname>SphericalSL::compute</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="36" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="36" bodyend="-1"/>
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-        <referencedby refid="class_spherical_s_l_1a7b2907961ff0bb8be26f174b8b7e7b02" compoundref="_spherical_s_l_8_h" startline="115" endline="115">unset_compute</referencedby>
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-        <type>std::vector&lt; Eigen::VectorXd &gt;</type>
-        <definition>std::vector&lt;Eigen::VectorXd&gt; SphericalSL::cosm</definition>
-        <argsstring></argsstring>
-        <name>cosm</name>
-        <qualifiedname>SphericalSL::cosm</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="28" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="28" bodyend="-1"/>
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-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; SphericalSL::dend</definition>
-        <argsstring></argsstring>
-        <name>dend</name>
-        <qualifiedname>SphericalSL::dend</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="27" column="36" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="27" bodyend="-1"/>
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-        <type>std::vector&lt; Eigen::MatrixXd &gt;</type>
-        <definition>std::vector&lt;Eigen::MatrixXd&gt; SphericalSL::dlegs</definition>
-        <argsstring></argsstring>
-        <name>dlegs</name>
-        <qualifiedname>SphericalSL::dlegs</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="27" column="30" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="27" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void SphericalSL::compute_coefficients_thread</definition>
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-        <name>compute_coefficients_thread</name>
-        <qualifiedname>SphericalSL::compute_coefficients_thread</qualifiedname>
-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; &amp;</type>
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-        <type>void</type>
-        <definition>void SphericalSL::compute_coefficients_thread_call</definition>
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-        <name>compute_coefficients_thread_call</name>
-        <qualifiedname>SphericalSL::compute_coefficients_thread_call</qualifiedname>
-        <param>
-          <type>int</type>
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-        <param>
-          <type>vector&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt; *</type>
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-        <type>void</type>
-        <definition>void SphericalSL::initialize</definition>
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-        <name>initialize</name>
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-          <type>void</type>
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-        <type>void</type>
-        <definition>void SphericalSL::parallel_distribute_coefficients</definition>
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-        <name>parallel_distribute_coefficients</name>
-        <qualifiedname>SphericalSL::parallel_distribute_coefficients</qualifiedname>
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-          <type>Eigen::MatrixXd &amp;</type>
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-        <name>parallel_gather_coefficients</name>
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-          <type>Eigen::MatrixXd &amp;</type>
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-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
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-        <param>
-          <type>std::vector&lt; Eigen::MatrixXd &gt; &amp;</type>
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-        <param>
-          <type>std::vector&lt; Eigen::MatrixXd &gt; &amp;</type>
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-          <type>int</type>
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-        <name>pca_hall</name>
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-          <type>int</type>
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-        <param>
-          <type>Eigen::MatrixXd &amp;</type>
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-        <type>void</type>
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-        <name>accumulate</name>
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-        <type>void</type>
-        <definition>void SphericalSL::determine_fields_at_point</definition>
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-        <param>
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-        <type>void</type>
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-        <name>dump_basis</name>
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-        <name>get_dens_coefs</name>
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-        <type>void</type>
-        <definition>void SphericalSL::unset_compute</definition>
-        <argsstring>()</argsstring>
-        <name>unset_compute</name>
-        <qualifiedname>SphericalSL::unset_compute</qualifiedname>
-        <briefdescription>
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-        </inbodydescription>
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-        <references refid="class_spherical_s_l_1a9671bd2fff23dd5eaeffb2a27447ef3a" compoundref="_spherical_s_l_8_h" startline="36">compute</references>
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-      <memberdef kind="function" id="class_spherical_s_l_1a8063a00b42944672b514b17dd5778dd8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>SphericalSL::~SphericalSL</definition>
-        <argsstring>(void)</argsstring>
-        <name>~SphericalSL</name>
-        <qualifiedname>SphericalSL::~SphericalSL</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="80" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" line="10" column="1" bodyfile="/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H" bodystart="11" bodyend="117"/>
-    <listofallmembers>
-      <member refid="class_spherical_s_l_1af15a1754fb2db03a205275cbef0c6e60" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>accumulate</name></member>
-      <member refid="class_spherical_s_l_1ab0b915995728fb506db35b8072f984d7" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>bomb</name></member>
-      <member refid="class_spherical_s_l_1ab9c7c5c049db19e357d6631dc70b2b4e" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>cc</name></member>
-      <member refid="class_spherical_s_l_1ab9002cf1895d5f730a6568f63a2b6cd0" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>cc1</name></member>
-      <member refid="class_spherical_s_l_1af1dec127f0a434f1337d7322a41d84da" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>coefs_made</name></member>
-      <member refid="class_spherical_s_l_1a9671bd2fff23dd5eaeffb2a27447ef3a" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>compute</name></member>
-      <member refid="class_spherical_s_l_1ad32f5b4b0c55d25aa1b87661e119fd54" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>compute_coefficients_single</name></member>
-      <member refid="class_spherical_s_l_1a22b23f361964348db82f0c8347b5b556" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>compute_coefficients_thread</name></member>
-      <member refid="class_spherical_s_l_1a6aa4080f08160947a30d4f4f562552e9" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>compute_coefficients_thread_call</name></member>
-      <member refid="class_spherical_s_l_1a05cbae75f825817d73162db85d092edd" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>cosm</name></member>
-      <member refid="class_spherical_s_l_1ad5b5e8c93a10b152df15a5f786826b77" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>dend</name></member>
-      <member refid="class_spherical_s_l_1a3ea2887e8eaedf357d1b5b0a3f208cd9" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>determine_fields_at_point</name></member>
-      <member refid="class_spherical_s_l_1ac37848646e23f36da4e63257bcb3e8f1" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>dlegs</name></member>
-      <member refid="class_spherical_s_l_1a56547945a90cae1f265fb9de079613c8" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>dpot</name></member>
-      <member refid="class_spherical_s_l_1a3c053acbc4e12dc6e4547111c20b299e" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>dump_basis</name></member>
-      <member refid="class_spherical_s_l_1a494ce992296743b635fdd918c6fa9919" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>dump_coefs</name></member>
-      <member refid="class_spherical_s_l_1a3fcbe20f703a0654cb7056ab40e9c68e" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>expcoef</name></member>
-      <member refid="class_spherical_s_l_1a8f9561d9c836c819a7aa0cabc224e30a" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>expcoef1</name></member>
-      <member refid="class_spherical_s_l_1a27fc15e71cb01c476f0670cb7d641ceb" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>factorial</name></member>
-      <member refid="class_spherical_s_l_1ae0fda047b7f9c1ea92e43f82c08e5ab9" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>get_dens_coefs</name></member>
-      <member refid="class_spherical_s_l_1afffc5a86b46b8a0aecd725d8507bd03e" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>get_maxNL</name></member>
-      <member refid="class_spherical_s_l_1a87dd97404e5e86848d52e98987a0602a" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>get_maxNR</name></member>
-      <member refid="class_spherical_s_l_1a5bac68d4ae7eb863535afed992de6487" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>get_pot_coefs</name></member>
-      <member refid="class_spherical_s_l_1a62e523cfc50426876e2e25c7365204e0" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>get_potl_dens</name></member>
-      <member refid="class_spherical_s_l_1af88fdc6e4c4e5120bba8b241cd6b4871" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>initialize</name></member>
-      <member refid="class_spherical_s_l_1a5a442bf7b842ca82d1b592ad2e27868b" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>initialized</name></member>
-      <member refid="class_spherical_s_l_1ac5d2727ecb38bd38e121521ceda3950b" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>krnl</name></member>
-      <member refid="class_spherical_s_l_1af8f9386d6d9563028c44c70aa1771c92" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>legs</name></member>
-      <member refid="class_spherical_s_l_1a813ecd95654c1fec10522b17108c547c" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>LMAX</name></member>
-      <member refid="class_spherical_s_l_1a8b8f5efd9e0bf448cf4843855c118339" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>MPIin</name></member>
-      <member refid="class_spherical_s_l_1a8fbdfaeb7fee4d5aac47c6429047fc1d" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>MPIout</name></member>
-      <member refid="class_spherical_s_l_1a013e230e435ec9959468f79d9b5c77d5" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>MPIset</name></member>
-      <member refid="class_spherical_s_l_1a337ba05ab773bbe52e8095004782d740" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>n</name></member>
-      <member refid="class_spherical_s_l_1a7deb9d187d3443d8369f7d3bd8bb75f5" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>NMAX</name></member>
-      <member refid="class_spherical_s_l_1aaf5f7d55c29f067bb5361169bcc85740" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>normM</name></member>
-      <member refid="class_spherical_s_l_1ad292826d37805ea410dd2e17e1b70892" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>nthrds</name></member>
-      <member refid="class_spherical_s_l_1a8b6f0e8798b2229d571a7673876e894f" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>NUMR</name></member>
-      <member refid="class_spherical_s_l_1a3a0f08d5dcbebd41912b30fd05978615" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>ortho</name></member>
-      <member refid="class_spherical_s_l_1a5fe46499b13bfcb98aff146e6ef4cb55" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>parallel_distribute_coefficients</name></member>
-      <member refid="class_spherical_s_l_1ad7d6391dd324af479b0207cf65aacae2" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>parallel_gather_coefficients</name></member>
-      <member refid="class_spherical_s_l_1af834ba9249aeda0d643843a117c9a3f4" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>pca_hall</name></member>
-      <member refid="class_spherical_s_l_1af33d70542f4d19abd21353a9eebe859e" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>potd</name></member>
-      <member refid="class_spherical_s_l_1a7fe882934aca4c0492ea73e2cb15ba00" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>reset</name></member>
-      <member refid="class_spherical_s_l_1a9b19e4bd0217e1205c5c803f482d17a4" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>RMAX</name></member>
-      <member refid="class_spherical_s_l_1a7c59e8cf62796026dabe7f94a4f8f6e9" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>RMIN</name></member>
-      <member refid="class_spherical_s_l_1afe1ac0cbd9c6d774f1b615544261ba9a" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>selector</name></member>
-      <member refid="class_spherical_s_l_1af8b936dba3c38e0fd00fde226f60b995" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>set_compute</name></member>
-      <member refid="class_spherical_s_l_1a8e1a0c690edbe2ed7ddc73da6c3b46a7" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>sinm</name></member>
-      <member refid="class_spherical_s_l_1ad11a116a7a9158618baec8394f26955d" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>SL</name></member>
-      <member refid="class_spherical_s_l_1ad02a12b988ea23d7d0ee2b145b0f6c16" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>SphericalSL</name></member>
-      <member refid="class_spherical_s_l_1a6b21bc7ab86f614c405ff272e7499fd5" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>SphericalSL</name></member>
-      <member refid="class_spherical_s_l_1a6d56f6cb68eb63243e1d965cbcfc9a4f" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>tk_type</name></member>
-      <member refid="class_spherical_s_l_1acc7c4f80202d99a49f3a92bc4df9dd23" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>tkcum</name></member>
-      <member refid="class_spherical_s_l_1a6eac202a1c2f07a57ba9ef424c9000e5" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>tksmooth</name></member>
-      <member refid="class_spherical_s_l_1a7b2907961ff0bb8be26f174b8b7e7b02" prot="public" virt="non-virtual"><scope>SphericalSL</scope><name>unset_compute</name></member>
-      <member refid="class_spherical_s_l_1a50e26f96820e4e50de3a58fc64b1c121" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>use</name></member>
-      <member refid="class_spherical_s_l_1a1d7bd83bd68c5ce84eb0a892246aa47a" prot="private" virt="non-virtual"><scope>SphericalSL</scope><name>used</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_spline1d.xml b/doxyxml/class_spline1d.xml
deleted file mode 100644
index 0206c2e..0000000
--- a/doxyxml/class_spline1d.xml
+++ /dev/null
@@ -1,317 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_spline1d" kind="class" language="C++" prot="public">
-    <compoundname>Spline1d</compoundname>
-    <basecompoundref refid="class_interp1d" prot="public" virt="non-virtual">Interp1d</basecompoundref>
-    <includes refid="interp_8_h" local="no">interp.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_spline1d_1a9893d02b2d855294177889021d619a88" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Spline1d::x</definition>
-        <argsstring></argsstring>
-        <name>x</name>
-        <qualifiedname>Spline1d::x</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="63" column="19" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="63" bodyend="-1"/>
-        <referencedby refid="class_spline1d_1ae85bd74849b3023151a8b22ff9c61a72" compoundref="interp_8_h" startline="97" endline="97">xhi</referencedby>
-        <referencedby refid="class_spline1d_1a604862983923c498185d9177d2b40d99" compoundref="interp_8_h" startline="96" endline="96">xlo</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_spline1d_1a1d6edf52c9bd5c91e6f900184c3aa909" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Spline1d::y</definition>
-        <argsstring></argsstring>
-        <name>y</name>
-        <qualifiedname>Spline1d::y</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="64" column="19" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="64" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spline1d_1a32a0f86bc7488946aba1db1c330d46ac" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Spline1d::y2</definition>
-        <argsstring></argsstring>
-        <name>y2</name>
-        <qualifiedname>Spline1d::y2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="64" column="21" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="64" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_spline1d_1a27aa98f94472783eef5a68a005a79b16" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double Spline1d::deriv</definition>
-        <argsstring>(const double &amp;x)</argsstring>
-        <name>deriv</name>
-        <qualifiedname>Spline1d::deriv</qualifiedname>
-        <reimplements refid="class_interp1d_1a47936fb17ab09ba1a5adae98615703f7">deriv</reimplements>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate first derivative. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="92" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1acae16b27f9faccaa82f6b17701980e24" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double Spline1d::eval</definition>
-        <argsstring>(const double &amp;x)</argsstring>
-        <name>eval</name>
-        <qualifiedname>Spline1d::eval</qualifiedname>
-        <reimplements refid="class_interp1d_1acb91fcf561ac596869ce571c30cf5583">eval</reimplements>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the interpolant. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="86" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1a0c75f5c5600c7acb11ccfed1bc23a584" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Spline1d::eval</definition>
-        <argsstring>(const double &amp;x, double &amp;val, double &amp;deriv)</argsstring>
-        <name>eval</name>
-        <qualifiedname>Spline1d::eval</qualifiedname>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>val</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>deriv</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the interpolant and its first derivative. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="89" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1aa87545d1a3cc7a3b7b22f9239ca3f778" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type><ref refid="class_spline1d" kindref="compound">Spline1d</ref> &amp;</type>
-        <definition>Spline1d &amp; Spline1d::operator=</definition>
-        <argsstring>(const Spline1d &amp;)</argsstring>
-        <name>operator=</name>
-        <qualifiedname>Spline1d::operator=</qualifiedname>
-        <param>
-          <type>const <ref refid="class_spline1d" kindref="compound">Spline1d</ref> &amp;</type>
-        </param>
-        <briefdescription>
-<para>Copy constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="80" column="12"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1a5bf05ae73e84bf848b8e3e65dfd9dcec" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Spline1d::Spline1d</definition>
-        <argsstring>()</argsstring>
-        <name>Spline1d</name>
-        <qualifiedname>Spline1d::Spline1d</qualifiedname>
-        <briefdescription>
-<para>Null constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="69" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1aff78d6b8bfb8e3b1abf2c0de48a652a6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Spline1d::Spline1d</definition>
-        <argsstring>(const Eigen::VectorXd &amp;x, const Eigen::VectorXd &amp;y, double d1=-1.0e30, double d2=-1.0e30)</argsstring>
-        <name>Spline1d</name>
-        <qualifiedname>Spline1d::Spline1d</qualifiedname>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>d1</declname>
-          <defval>-1.0e30</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>d2</declname>
-          <defval>-1.0e30</defval>
-        </param>
-        <briefdescription>
-<para>Consruct with Eigen input. d1 and d2 are 2nd derivative BCs. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="72" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1af59e1503b1dd03e2695664557e23e252" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Spline1d::Spline1d</definition>
-        <argsstring>(const std::vector&lt; double &gt; &amp;x, const std::vector&lt; double &gt; &amp;y, double d1=-1.0e30, double d2=-1.0e30)</argsstring>
-        <name>Spline1d</name>
-        <qualifiedname>Spline1d::Spline1d</qualifiedname>
-        <param>
-          <type>const std::vector&lt; double &gt; &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const std::vector&lt; double &gt; &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>d1</declname>
-          <defval>-1.0e30</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>d2</declname>
-          <defval>-1.0e30</defval>
-        </param>
-        <briefdescription>
-<para>Consruct with std::vector input. d1 and d2 are 2nd derivative BCs. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="76" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1ae85bd74849b3023151a8b22ff9c61a72" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Spline1d::xhi</definition>
-        <argsstring>()</argsstring>
-        <name>xhi</name>
-        <qualifiedname>Spline1d::xhi</qualifiedname>
-        <reimplements refid="class_interp1d_1a7acc2957f6163115ad925d21d9ab2783">xhi</reimplements>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="97" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="97" bodyend="97"/>
-        <references refid="class_spline1d_1a9893d02b2d855294177889021d619a88" compoundref="interp_8_h" startline="63">x</references>
-        <referencedby refid="class_one_d_model_table_1a13f27de596abd616ee395c5a27323346" compoundref="massmodel1d_8_h" startline="85" endline="85">OneDModelTable::get_max_radius</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1a604862983923c498185d9177d2b40d99" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double Spline1d::xlo</definition>
-        <argsstring>()</argsstring>
-        <name>xlo</name>
-        <qualifiedname>Spline1d::xlo</qualifiedname>
-        <reimplements refid="class_interp1d_1ad7d8aaee41f1df6e533bfbb3089e8b67">xlo</reimplements>
-        <briefdescription>
-<para>Data limits. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="96" column="10" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="96" bodyend="96"/>
-        <references refid="class_spline1d_1a9893d02b2d855294177889021d619a88" compoundref="interp_8_h" startline="63">x</references>
-        <referencedby refid="class_one_d_model_table_1a4860f3919c37e90be0328cd512544c70" compoundref="massmodel1d_8_h" startline="84" endline="84">OneDModelTable::get_min_radius</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_spline1d_1a4af2948c59689f542ccfe1536efaf6a9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Spline1d::~Spline1d</definition>
-        <argsstring>()</argsstring>
-        <name>~Spline1d</name>
-        <qualifiedname>Spline1d::~Spline1d</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="83" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>Interp1d</label>
-        <link refid="class_interp1d"/>
-      </node>
-      <node id="1">
-        <label>Spline1d</label>
-        <link refid="class_spline1d"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>Interp1d</label>
-        <link refid="class_interp1d"/>
-      </node>
-      <node id="1">
-        <label>Spline1d</label>
-        <link refid="class_spline1d"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/interp.H" line="59" column="1" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="60" bodyend="99"/>
-    <listofallmembers>
-      <member refid="class_spline1d_1a27aa98f94472783eef5a68a005a79b16" prot="public" virt="virtual"><scope>Spline1d</scope><name>deriv</name></member>
-      <member refid="class_spline1d_1acae16b27f9faccaa82f6b17701980e24" prot="public" virt="virtual"><scope>Spline1d</scope><name>eval</name></member>
-      <member refid="class_spline1d_1a0c75f5c5600c7acb11ccfed1bc23a584" prot="public" virt="non-virtual"><scope>Spline1d</scope><name>eval</name></member>
-      <member refid="class_spline1d_1aa87545d1a3cc7a3b7b22f9239ca3f778" prot="public" virt="non-virtual"><scope>Spline1d</scope><name>operator=</name></member>
-      <member refid="class_spline1d_1a5bf05ae73e84bf848b8e3e65dfd9dcec" prot="public" virt="non-virtual"><scope>Spline1d</scope><name>Spline1d</name></member>
-      <member refid="class_spline1d_1aff78d6b8bfb8e3b1abf2c0de48a652a6" prot="public" virt="non-virtual"><scope>Spline1d</scope><name>Spline1d</name></member>
-      <member refid="class_spline1d_1af59e1503b1dd03e2695664557e23e252" prot="public" virt="non-virtual"><scope>Spline1d</scope><name>Spline1d</name></member>
-      <member refid="class_spline1d_1a9893d02b2d855294177889021d619a88" prot="private" virt="non-virtual"><scope>Spline1d</scope><name>x</name></member>
-      <member refid="class_spline1d_1ae85bd74849b3023151a8b22ff9c61a72" prot="public" virt="virtual"><scope>Spline1d</scope><name>xhi</name></member>
-      <member refid="class_spline1d_1a604862983923c498185d9177d2b40d99" prot="public" virt="virtual"><scope>Spline1d</scope><name>xlo</name></member>
-      <member refid="class_spline1d_1a1d6edf52c9bd5c91e6f900184c3aa909" prot="private" virt="non-virtual"><scope>Spline1d</scope><name>y</name></member>
-      <member refid="class_spline1d_1a32a0f86bc7488946aba1db1c330d46ac" prot="private" virt="non-virtual"><scope>Spline1d</scope><name>y2</name></member>
-      <member refid="class_interp1d_1a21ea97560f42d16715c1d9c6efb2d092" prot="public" virt="pure-virtual"><scope>Spline1d</scope><name>~Interp1d</name></member>
-      <member refid="class_spline1d_1a4af2948c59689f542ccfe1536efaf6a9" prot="public" virt="non-virtual"><scope>Spline1d</scope><name>~Spline1d</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_spline2d.xml b/doxyxml/class_spline2d.xml
deleted file mode 100644
index bd416c6..0000000
--- a/doxyxml/class_spline2d.xml
+++ /dev/null
@@ -1,216 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_spline2d" kind="class" language="C++" prot="public">
-    <compoundname>Spline2d</compoundname>
-    <includes refid="interp_8_h" local="no">interp.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_spline2d_1a48b7922ccc4d083973623e9b2e61f52a" prot="private" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Spline2d::mat</definition>
-        <argsstring></argsstring>
-        <name>mat</name>
-        <qualifiedname>Spline2d::mat</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="238" column="19" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="238" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spline2d_1a4e1b8149d5e60971f0b768e181ba895e" prot="private" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd Spline2d::mat2d</definition>
-        <argsstring></argsstring>
-        <name>mat2d</name>
-        <qualifiedname>Spline2d::mat2d</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="238" column="23" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="238" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spline2d_1ae5df0a5125042539f8cc8fc47c3b16b1" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Spline2d::x</definition>
-        <argsstring></argsstring>
-        <name>x</name>
-        <qualifiedname>Spline2d::x</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="236" column="19" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="236" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spline2d_1a9c4fda88d69dde6ffa08cdf90ede1559" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Spline2d::xval</definition>
-        <argsstring></argsstring>
-        <name>xval</name>
-        <qualifiedname>Spline2d::xval</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="237" column="19" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="237" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spline2d_1a730b3dbc228062600ce8e93620469b12" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Spline2d::xval2</definition>
-        <argsstring></argsstring>
-        <name>xval2</name>
-        <qualifiedname>Spline2d::xval2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="237" column="24" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="237" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_spline2d_1ab8835dc9776d6b70f81c01586d0977e3" prot="private" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd Spline2d::y</definition>
-        <argsstring></argsstring>
-        <name>y</name>
-        <qualifiedname>Spline2d::y</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="236" column="21" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="236" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-static-attrib">
-      <memberdef kind="variable" id="class_spline2d_1af3fdd6acc906f15c5c4fa97a8ef2151c" prot="public" static="yes" mutable="no">
-        <type>double</type>
-        <definition>double Spline2d::DERIV</definition>
-        <argsstring></argsstring>
-        <name>DERIV</name>
-        <qualifiedname>Spline2d::DERIV</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="241" column="17" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="241" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_spline2d_1aec060180e210ed4693bfea1ef60ca1fc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Spline2d::eval</definition>
-        <argsstring>(const double &amp;x, const double &amp;y)</argsstring>
-        <name>eval</name>
-        <qualifiedname>Spline2d::eval</qualifiedname>
-        <param>
-          <type>const double &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const double &amp;</type>
-          <declname>y</declname>
-        </param>
-        <briefdescription>
-<para>Evaluate the interpolant. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="253" column="10"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline2d_1af17579c6e93108587c38e4052c391826" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type><ref refid="class_spline2d" kindref="compound">Spline2d</ref> &amp;</type>
-        <definition>Spline2d &amp; Spline2d::operator=</definition>
-        <argsstring>(const Spline2d &amp;)</argsstring>
-        <name>operator=</name>
-        <qualifiedname>Spline2d::operator=</qualifiedname>
-        <param>
-          <type>const <ref refid="class_spline2d" kindref="compound">Spline2d</ref> &amp;</type>
-        </param>
-        <briefdescription>
-<para>Copy constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="250" column="12"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline2d_1ad71fc44e362470889d2bf06907637b0e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Spline2d::Spline2d</definition>
-        <argsstring>(const Eigen::VectorXd &amp;x, const Eigen::VectorXd &amp;y, const Eigen::MatrixXd &amp;mat)</argsstring>
-        <name>Spline2d</name>
-        <qualifiedname>Spline2d::Spline2d</qualifiedname>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>const Eigen::MatrixXd &amp;</type>
-          <declname>mat</declname>
-        </param>
-        <briefdescription>
-<para>Construct from Eigen input. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="247" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_spline2d_1a94381849277938c84639add7d46982f3" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>Spline2d::Spline2d</definition>
-        <argsstring>(void)</argsstring>
-        <name>Spline2d</name>
-        <qualifiedname>Spline2d::Spline2d</qualifiedname>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-<para>Null constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="244" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Two dimensional spline interpolator. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/interp.H" line="232" column="1" bodyfile="/home/weinberg/Projects/EXP/include/interp.H" bodystart="233" bodyend="254"/>
-    <listofallmembers>
-      <member refid="class_spline2d_1af3fdd6acc906f15c5c4fa97a8ef2151c" prot="public" virt="non-virtual"><scope>Spline2d</scope><name>DERIV</name></member>
-      <member refid="class_spline2d_1aec060180e210ed4693bfea1ef60ca1fc" prot="public" virt="non-virtual"><scope>Spline2d</scope><name>eval</name></member>
-      <member refid="class_spline2d_1a48b7922ccc4d083973623e9b2e61f52a" prot="private" virt="non-virtual"><scope>Spline2d</scope><name>mat</name></member>
-      <member refid="class_spline2d_1a4e1b8149d5e60971f0b768e181ba895e" prot="private" virt="non-virtual"><scope>Spline2d</scope><name>mat2d</name></member>
-      <member refid="class_spline2d_1af17579c6e93108587c38e4052c391826" prot="public" virt="non-virtual"><scope>Spline2d</scope><name>operator=</name></member>
-      <member refid="class_spline2d_1a94381849277938c84639add7d46982f3" prot="public" virt="non-virtual"><scope>Spline2d</scope><name>Spline2d</name></member>
-      <member refid="class_spline2d_1ad71fc44e362470889d2bf06907637b0e" prot="public" virt="non-virtual"><scope>Spline2d</scope><name>Spline2d</name></member>
-      <member refid="class_spline2d_1ae5df0a5125042539f8cc8fc47c3b16b1" prot="private" virt="non-virtual"><scope>Spline2d</scope><name>x</name></member>
-      <member refid="class_spline2d_1a9c4fda88d69dde6ffa08cdf90ede1559" prot="private" virt="non-virtual"><scope>Spline2d</scope><name>xval</name></member>
-      <member refid="class_spline2d_1a730b3dbc228062600ce8e93620469b12" prot="private" virt="non-virtual"><scope>Spline2d</scope><name>xval2</name></member>
-      <member refid="class_spline2d_1ab8835dc9776d6b70f81c01586d0977e3" prot="private" virt="non-virtual"><scope>Spline2d</scope><name>y</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_spline_soft.xml b/doxyxml/class_spline_soft.xml
deleted file mode 100644
index 706e674..0000000
--- a/doxyxml/class_spline_soft.xml
+++ /dev/null
@@ -1,239 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_spline_soft" kind="class" language="C++" prot="public">
-    <compoundname>SplineSoft</compoundname>
-    <basecompoundref refid="class_soft_kernel" prot="public" virt="non-virtual">SoftKernel</basecompoundref>
-    <includes refid="_grav_kernel_8_h" local="no">GravKernel.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_spline_soft_1ae7558c977bb437fee1fe245e98791fbe" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SplineSoft::eps</definition>
-        <argsstring></argsstring>
-        <name>eps</name>
-        <qualifiedname>SplineSoft::eps</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/GravKernel.H" line="35" column="10" bodyfile="/home/weinberg/Projects/EXP/src/GravKernel.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
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-        <location file="/home/weinberg/Projects/EXP/src/GravKernel.H" line="35" column="24" bodyfile="/home/weinberg/Projects/EXP/src/GravKernel.H" bodystart="35" bodyend="-1"/>
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-        <qualifiedname>SplineSoft::m1</qualifiedname>
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-          <type>double</type>
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-<para>Spline kernel integrals. </para>
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-        <type>double</type>
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-        <name>p1</name>
-        <qualifiedname>SplineSoft::p1</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
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-        <type>double</type>
-        <definition>double SplineSoft::p2</definition>
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-        <name>p2</name>
-        <qualifiedname>SplineSoft::p2</qualifiedname>
-        <param>
-          <type>double</type>
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-        <type>std::pair&lt; double, double &gt;</type>
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-<para>Main operator returning enclosed mass and gravitational potential </para>
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diff --git a/doxyxml/class_stats_m_p_i.xml b/doxyxml/class_stats_m_p_i.xml
deleted file mode 100644
index c37cd8a..0000000
--- a/doxyxml/class_stats_m_p_i.xml
+++ /dev/null
@@ -1,269 +0,0 @@
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-      </memberdef>
-      <memberdef kind="variable" id="class_stats_m_p_i_1abd6d00928a5fd060f644f564dc731d1e" prot="private" static="no" mutable="no">
-        <type>std::map&lt; <ref refid="_species_8_h_1a3f0873301e93f9a5e3ddf62fc0af14e0" kindref="member">speciesKey</ref>, double &gt;</type>
-        <definition>std::map&lt;speciesKey, double&gt; StatsMPI::vsum</definition>
-        <argsstring></argsstring>
-        <name>vsum</name>
-        <qualifiedname>StatsMPI::vsum</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/StatsMPI.H" line="21" column="12" bodyfile="/home/weinberg/Projects/EXP/src/StatsMPI.H" bodystart="21" bodyend="-1"/>
-        <referencedby refid="class_stats_m_p_i_1a1465e96175d7522bec590ffbc656a457" compoundref="_stats_m_p_i_8_h" startline="79" endline="85">clear</referencedby>
-        <referencedby refid="class_stats_m_p_i_1a60c418b8b0a9d9c32986b5069ca23245" compoundref="_stats_m_p_i_8_h" startline="24" endline="39">share</referencedby>
-        <referencedby refid="class_stats_m_p_i_1ac58165e1b155cb1ccbdbf8f2fc1d2e8f" compoundref="_stats_m_p_i_8_h" startline="67" endline="76">stats</referencedby>
-      </memberdef>
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-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_stats_m_p_i_1a60c418b8b0a9d9c32986b5069ca23245" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void StatsMPI::share</definition>
-        <argsstring>()</argsstring>
-        <name>share</name>
-        <qualifiedname>StatsMPI::share</qualifiedname>
-        <briefdescription>
-<para>Gather from MPI nodes. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/StatsMPI.H" line="24" column="8" bodyfile="/home/weinberg/Projects/EXP/src/StatsMPI.H" bodystart="24" bodyend="39"/>
-        <references refid="class_stats_m_p_i_1aaa1554f6527aa20efea41ed279f85251" compoundref="_stats_m_p_i_8_h" startline="20">ccnt</references>
-        <references refid="class_stats_m_p_i_1aeabb97176fa75279b1370c7b977f0b68" compoundref="_stats_m_p_i_8_h" startline="17">cntT</references>
-        <references refid="class_stats_m_p_i_1a7177fb05946071fc821a1b7ef699c13e" compoundref="_stats_m_p_i_8_h" startline="18">curT</references>
-        <references refid="class_stats_m_p_i_1abd6d00928a5fd060f644f564dc731d1e" compoundref="_stats_m_p_i_8_h" startline="21">vsum</references>
-        <referencedby refid="class_stats_m_p_i_1ac58165e1b155cb1ccbdbf8f2fc1d2e8f" compoundref="_stats_m_p_i_8_h" startline="67" endline="76">stats</referencedby>
-      </memberdef>
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-      <memberdef kind="function" id="class_stats_m_p_i_1a84be5c2015067b6c9fcbf6b263c161d9" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void StatsMPI::add</definition>
-        <argsstring>(const speciesKey &amp;k, double wgt, double val)</argsstring>
-        <name>add</name>
-        <qualifiedname>StatsMPI::add</qualifiedname>
-        <param>
-          <type>const <ref refid="_species_8_h_1a3f0873301e93f9a5e3ddf62fc0af14e0" kindref="member">speciesKey</ref> &amp;</type>
-          <declname>k</declname>
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-        <param>
-          <type>double</type>
-          <declname>wgt</declname>
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-        <param>
-          <type>double</type>
-          <declname>val</declname>
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-        <briefdescription>
-<para>Add a value. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/StatsMPI.H" line="47" column="8" bodyfile="/home/weinberg/Projects/EXP/src/StatsMPI.H" bodystart="47" bodyend="60"/>
-        <references refid="class_stats_m_p_i_1aeabb97176fa75279b1370c7b977f0b68" compoundref="_stats_m_p_i_8_h" startline="17">cntT</references>
-        <references refid="class_stats_m_p_i_1a7177fb05946071fc821a1b7ef699c13e" compoundref="_stats_m_p_i_8_h" startline="18">curT</references>
-        <references refid="class_stats_m_p_i_1a947e5b4ceb06780a9eed236d97d9d95e" compoundref="_stats_m_p_i_8_h" startline="21">vmax</references>
-        <references refid="class_stats_m_p_i_1a24fd7cca8b971316c9ddd286f26ba6a5" compoundref="_stats_m_p_i_8_h" startline="21">vmin</references>
-      </memberdef>
-      <memberdef kind="function" id="class_stats_m_p_i_1a1465e96175d7522bec590ffbc656a457" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void StatsMPI::clear</definition>
-        <argsstring>()</argsstring>
-        <name>clear</name>
-        <qualifiedname>StatsMPI::clear</qualifiedname>
-        <briefdescription>
-<para>Reset values. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/StatsMPI.H" line="79" column="8" bodyfile="/home/weinberg/Projects/EXP/src/StatsMPI.H" bodystart="79" bodyend="85"/>
-        <references refid="class_stats_m_p_i_1aaa1554f6527aa20efea41ed279f85251" compoundref="_stats_m_p_i_8_h" startline="20">ccnt</references>
-        <references refid="class_stats_m_p_i_1a947e5b4ceb06780a9eed236d97d9d95e" compoundref="_stats_m_p_i_8_h" startline="21">vmax</references>
-        <references refid="class_stats_m_p_i_1a24fd7cca8b971316c9ddd286f26ba6a5" compoundref="_stats_m_p_i_8_h" startline="21">vmin</references>
-        <references refid="class_stats_m_p_i_1abd6d00928a5fd060f644f564dc731d1e" compoundref="_stats_m_p_i_8_h" startline="21">vsum</references>
-      </memberdef>
-      <memberdef kind="function" id="class_stats_m_p_i_1ac58165e1b155cb1ccbdbf8f2fc1d2e8f" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type><ref refid="class_stats_m_p_i_1a1eb9c91baf779feb62dac1daf389388d" kindref="member">Return</ref></type>
-        <definition>Return StatsMPI::stats</definition>
-        <argsstring>()</argsstring>
-        <name>stats</name>
-        <qualifiedname>StatsMPI::stats</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Gather values from nodes and return count, mean weighted value, and min and max preweighted value </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/StatsMPI.H" line="67" column="10" bodyfile="/home/weinberg/Projects/EXP/src/StatsMPI.H" bodystart="67" bodyend="76"/>
-        <references refid="class_stats_m_p_i_1aaa1554f6527aa20efea41ed279f85251" compoundref="_stats_m_p_i_8_h" startline="20">ccnt</references>
-        <references refid="class_stats_m_p_i_1a60c418b8b0a9d9c32986b5069ca23245" compoundref="_stats_m_p_i_8_h" startline="24" endline="39">share</references>
-        <references refid="class_stats_m_p_i_1a947e5b4ceb06780a9eed236d97d9d95e" compoundref="_stats_m_p_i_8_h" startline="21">vmax</references>
-        <references refid="class_stats_m_p_i_1a24fd7cca8b971316c9ddd286f26ba6a5" compoundref="_stats_m_p_i_8_h" startline="21">vmin</references>
-        <references refid="class_stats_m_p_i_1abd6d00928a5fd060f644f564dc731d1e" compoundref="_stats_m_p_i_8_h" startline="21">vsum</references>
-      </memberdef>
-      <memberdef kind="function" id="class_stats_m_p_i_1ac248462c3fb6c44b47a9978b88169be5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>StatsMPI::StatsMPI</definition>
-        <argsstring>()</argsstring>
-        <name>StatsMPI</name>
-        <qualifiedname>StatsMPI::StatsMPI</qualifiedname>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/StatsMPI.H" line="44" column="3" bodyfile="/home/weinberg/Projects/EXP/src/StatsMPI.H" bodystart="44" bodyend="44"/>
-      </memberdef>
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-    <detaileddescription>
-<para>A class for accumulating data and computing rate coefficients from the DSMC simulation distribution. </para>
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-    <listofallmembers>
-      <member refid="class_stats_m_p_i_1a84be5c2015067b6c9fcbf6b263c161d9" prot="public" virt="non-virtual"><scope>StatsMPI</scope><name>add</name></member>
-      <member refid="class_stats_m_p_i_1aaa1554f6527aa20efea41ed279f85251" prot="private" virt="non-virtual"><scope>StatsMPI</scope><name>ccnt</name></member>
-      <member refid="class_stats_m_p_i_1a1465e96175d7522bec590ffbc656a457" prot="public" virt="non-virtual"><scope>StatsMPI</scope><name>clear</name></member>
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-      <member refid="class_stats_m_p_i_1a7177fb05946071fc821a1b7ef699c13e" prot="private" virt="non-virtual"><scope>StatsMPI</scope><name>curT</name></member>
-      <member refid="class_stats_m_p_i_1a1eb9c91baf779feb62dac1daf389388d" prot="public" virt="non-virtual"><scope>StatsMPI</scope><name>Return</name></member>
-      <member refid="class_stats_m_p_i_1a60c418b8b0a9d9c32986b5069ca23245" prot="private" virt="non-virtual"><scope>StatsMPI</scope><name>share</name></member>
-      <member refid="class_stats_m_p_i_1a8e180c017fc4704b7afa324d74e87a60" prot="public" virt="non-virtual"><scope>StatsMPI</scope><name>SpStat</name></member>
-      <member refid="class_stats_m_p_i_1ac58165e1b155cb1ccbdbf8f2fc1d2e8f" prot="public" virt="non-virtual"><scope>StatsMPI</scope><name>stats</name></member>
-      <member refid="class_stats_m_p_i_1ac248462c3fb6c44b47a9978b88169be5" prot="public" virt="non-virtual"><scope>StatsMPI</scope><name>StatsMPI</name></member>
-      <member refid="class_stats_m_p_i_1a947e5b4ceb06780a9eed236d97d9d95e" prot="private" virt="non-virtual"><scope>StatsMPI</scope><name>vmax</name></member>
-      <member refid="class_stats_m_p_i_1a24fd7cca8b971316c9ddd286f26ba6a5" prot="private" virt="non-virtual"><scope>StatsMPI</scope><name>vmin</name></member>
-      <member refid="class_stats_m_p_i_1abd6d00928a5fd060f644f564dc731d1e" prot="private" virt="non-virtual"><scope>StatsMPI</scope><name>vsum</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_string_tok.xml b/doxyxml/class_string_tok.xml
deleted file mode 100644
index 6e93df0..0000000
--- a/doxyxml/class_string_tok.xml
+++ /dev/null
@@ -1,96 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_string_tok" kind="class" language="C++" prot="public">
-    <compoundname>StringTok</compoundname>
-    <includes refid="_string_tok_8_h" local="no">StringTok.H</includes>
-    <templateparamlist>
-      <param>
-        <type>class T</type>
-      </param>
-    </templateparamlist>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_string_tok_1a04d5b0bed84f231483af0113c445b537" prot="private" static="no" mutable="no">
-        <type>T::size_type</type>
-        <definition>T::size_type StringTok&lt; T &gt;::pos_</definition>
-        <argsstring></argsstring>
-        <name>pos_</name>
-        <qualifiedname>StringTok::pos_</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/StringTok.H" line="16" column="25" bodyfile="/home/weinberg/Projects/EXP/include/StringTok.H" bodystart="16" bodyend="-1"/>
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-        <type>const T</type>
-        <definition>const T StringTok&lt; T &gt;::seq_</definition>
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-        <name>seq_</name>
-        <qualifiedname>StringTok::seq_</qualifiedname>
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-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/StringTok.H" line="15" column="11" bodyfile="/home/weinberg/Projects/EXP/include/StringTok.H" bodystart="15" bodyend="-1"/>
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-    <sectiondef kind="public-func">
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-        <type>T</type>
-        <definition>T StringTok&lt; T &gt;::operator()</definition>
-        <argsstring>(const T &amp;delim)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>StringTok::operator()</qualifiedname>
-        <param>
-          <type>const T &amp;</type>
-          <declname>delim</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/StringTok.H" line="12" column="5" bodyfile="/home/weinberg/Projects/EXP/include/StringTok.H" bodystart="21" bodyend="49"/>
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-        <type></type>
-        <definition>StringTok&lt; T &gt;::StringTok</definition>
-        <argsstring>(const T seq, typename T::size_type pos=0)</argsstring>
-        <name>StringTok</name>
-        <qualifiedname>StringTok::StringTok</qualifiedname>
-        <param>
-          <type>const T</type>
-          <declname>seq</declname>
-        </param>
-        <param>
-          <type>typename T::size_type</type>
-          <declname>pos</declname>
-          <defval>0</defval>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/StringTok.H" line="8" column="3" bodyfile="/home/weinberg/Projects/EXP/include/StringTok.H" bodystart="8" bodyend="10"/>
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-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/StringTok.H" line="5" column="1" bodyfile="/home/weinberg/Projects/EXP/include/StringTok.H" bodystart="6" bodyend="17"/>
-    <listofallmembers>
-      <member refid="class_string_tok_1a116c94c979192542154597309ddb798b" prot="public" virt="non-virtual"><scope>StringTok</scope><name>operator()</name></member>
-      <member refid="class_string_tok_1a04d5b0bed84f231483af0113c445b537" prot="private" virt="non-virtual"><scope>StringTok</scope><name>pos_</name></member>
-      <member refid="class_string_tok_1ada5b2a45f703e70475d662203dad49dd" prot="private" virt="non-virtual"><scope>StringTok</scope><name>seq_</name></member>
-      <member refid="class_string_tok_1a46fddfbcfb48f2f7915d320079a49196" prot="public" virt="non-virtual"><scope>StringTok</scope><name>StringTok</name></member>
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diff --git a/doxyxml/class_swap.xml b/doxyxml/class_swap.xml
deleted file mode 100644
index 9058593..0000000
--- a/doxyxml/class_swap.xml
+++ /dev/null
@@ -1,178 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_swap" kind="class" language="C++" prot="public">
-    <compoundname>Swap</compoundname>
-    <includes refid="_swap_8_h" local="no">Swap.H</includes>
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-      <param>
-        <type>class T</type>
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-        <definition>int Swap&lt; T &gt;::done</definition>
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-        <qualifiedname>Swap::done</qualifiedname>
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-        <referencedby refid="class_swap_1a1e5b1c625ec09fded0ecbed0f3f1cee3" compoundref="_swap_8_h" startline="24" endline="38">Swap&lt; T &gt;::out</referencedby>
-        <referencedby refid="class_swap_1a00fc85a2685cb00fb2b1f54e5a212ab6" compoundref="_swap_8_h" startline="22" endline="22">Swap&lt; T &gt;::rin</referencedby>
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-      <memberdef kind="variable" id="class_swap_1a03f540ca067876830ba1578149a3df94" prot="private" static="no" mutable="no">
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-        <qualifiedname>Swap::u</qualifiedname>
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-        <referencedby refid="class_swap_1a1e5b1c625ec09fded0ecbed0f3f1cee3" compoundref="_swap_8_h" startline="24" endline="38">Swap&lt; T &gt;::out</referencedby>
-        <referencedby refid="class_swap_1a00fc85a2685cb00fb2b1f54e5a212ab6" compoundref="_swap_8_h" startline="22" endline="22">Swap&lt; T &gt;::rin</referencedby>
-        <referencedby refid="class_swap_1ae7935aea92931e1aaf43cc8d58cdb8fe" compoundref="_swap_8_h" startline="19" endline="19">Swap&lt; T &gt;::Swap</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_swap_1a6dc37c0d395d9b2fb1e64663ff915966" prot="public" static="no" mutable="no">
-        <type>unsigned char</type>
-        <definition>unsigned char Swap&lt; T &gt;::b[sizeof(T)]</definition>
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-        <name>b</name>
-        <qualifiedname>Swap::b</qualifiedname>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/Swap.H" line="13" column="19" bodyfile="/home/weinberg/Projects/EXP/include/Swap.H" bodystart="13" bodyend="-1"/>
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-        <definition>T Swap&lt; T &gt;::n</definition>
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-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
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-        <references refid="class_swap_1a03f540ca067876830ba1578149a3df94">Swap&lt; T &gt;::u</references>
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-        <type>T</type>
-        <definition>T Swap&lt; T &gt;::out</definition>
-        <argsstring>()</argsstring>
-        <name>out</name>
-        <qualifiedname>Swap::out</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Swap.H" line="24" column="5" bodyfile="/home/weinberg/Projects/EXP/include/Swap.H" bodystart="24" bodyend="38"/>
-        <references refid="class_swap_1a8a9bd2ae6473c842d407f4900eae32a5" compoundref="_swap_8_h" startline="9">Swap&lt; T &gt;::done</references>
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-        <references refid="class_swap_1a8a9bd2ae6473c842d407f4900eae32a5" compoundref="_swap_8_h" startline="9">Swap&lt; T &gt;::done</references>
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-        <type></type>
-        <definition>Swap&lt; T &gt;::Swap</definition>
-        <argsstring>()</argsstring>
-        <name>Swap</name>
-        <qualifiedname>Swap::Swap</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Swap.H" line="18" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Swap.H" bodystart="18" bodyend="18"/>
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-        <type></type>
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-        <name>Swap</name>
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-        <param>
-          <type>T</type>
-          <declname>i</declname>
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-        <references refid="class_swap_1a03f540ca067876830ba1578149a3df94">Swap&lt; T &gt;::u</references>
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-      <member refid="class_swap_1ab0e6caeb0bcd672f45a7c76605cf26b4" prot="public" virt="non-virtual"><scope>Swap</scope><name>n</name></member>
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-      <member refid="class_swap_1ae7935aea92931e1aaf43cc8d58cdb8fe" prot="public" virt="non-virtual"><scope>Swap</scope><name>Swap</name></member>
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diff --git a/doxyxml/class_table_cyl.xml b/doxyxml/class_table_cyl.xml
deleted file mode 100644
index c6c979a..0000000
--- a/doxyxml/class_table_cyl.xml
+++ /dev/null
@@ -1,76 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_table_cyl" kind="class" language="C++" prot="public">
-    <compoundname>TableCyl</compoundname>
-    <includes refid="sltable_m_p2_8_h" local="no">sltableMP2.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_table_cyl_1a034f4bd51cf3b53664375125c36abac2" prot="public" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd TableCyl::ef</definition>
-        <argsstring></argsstring>
-        <name>ef</name>
-        <qualifiedname>TableCyl::ef</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="13" column="19" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="13" bodyend="-1"/>
-      </memberdef>
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-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd TableCyl::ev</definition>
-        <argsstring></argsstring>
-        <name>ev</name>
-        <qualifiedname>TableCyl::ev</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="12" column="19" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="12" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_table_cyl_1aaafe08503acff248705ea191ed9201e8" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TableCyl::k</definition>
-        <argsstring></argsstring>
-        <name>k</name>
-        <qualifiedname>TableCyl::k</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="10" column="7" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="10" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_table_cyl_1a911f2bd83a995155123ba727b6338e30" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TableCyl::m</definition>
-        <argsstring></argsstring>
-        <name>m</name>
-        <qualifiedname>TableCyl::m</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="9" column="7" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="9" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="6" column="1" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="7" bodyend="14"/>
-    <listofallmembers>
-      <member refid="class_table_cyl_1a034f4bd51cf3b53664375125c36abac2" prot="public" virt="non-virtual"><scope>TableCyl</scope><name>ef</name></member>
-      <member refid="class_table_cyl_1ac4fff277778c9108e10f4f40a375b486" prot="public" virt="non-virtual"><scope>TableCyl</scope><name>ev</name></member>
-      <member refid="class_table_cyl_1aaafe08503acff248705ea191ed9201e8" prot="public" virt="non-virtual"><scope>TableCyl</scope><name>k</name></member>
-      <member refid="class_table_cyl_1a911f2bd83a995155123ba727b6338e30" prot="public" virt="non-virtual"><scope>TableCyl</scope><name>m</name></member>
-    </listofallmembers>
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diff --git a/doxyxml/class_table_grid.xml b/doxyxml/class_table_grid.xml
deleted file mode 100644
index 88b6eb6..0000000
--- a/doxyxml/class_table_grid.xml
+++ /dev/null
@@ -1,245 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_table_grid" kind="class" language="C++" prot="public">
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-        <location file="/home/weinberg/Projects/EXP/include/TableGrid.H" line="25" column="26" bodyfile="/home/weinberg/Projects/EXP/include/TableGrid.H" bodystart="25" bodyend="-1"/>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/TableGrid.H" line="27" column="12" bodyfile="/home/weinberg/Projects/EXP/include/TableGrid.H" bodystart="27" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_table_grid_1afd0003686ea337b0e369cc7faec5cd5a" prot="protected" static="no" mutable="no">
-        <type>std::vector&lt; float &gt;</type>
-        <definition>std::vector&lt;float&gt; TableGrid::XX</definition>
-        <argsstring></argsstring>
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-        <qualifiedname>TableGrid::XX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/TableGrid.H" line="22" column="15" bodyfile="/home/weinberg/Projects/EXP/include/TableGrid.H" bodystart="22" bodyend="-1"/>
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-        <type>std::vector&lt; float &gt;</type>
-        <definition>std::vector&lt;float&gt; TableGrid::YY</definition>
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-        <name>YY</name>
-        <qualifiedname>TableGrid::YY</qualifiedname>
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-        <detaileddescription>
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-        <type>std::vector&lt; float &gt;</type>
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-        <type>void</type>
-        <definition>void TableGrid::Add</definition>
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-        <name>Add</name>
-        <qualifiedname>TableGrid::Add</qualifiedname>
-        <reimplements refid="class_three_d_grid_1affe7a7b6bca0874f96c654ae34c8190a">Add</reimplements>
-        <param>
-          <type>const std::vector&lt; double &gt; &amp;</type>
-          <declname>data</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
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-        <briefdescription>
-<para>Add data. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/TableGrid.H" line="37" column="8"/>
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-        <name>TableGrid</name>
-        <qualifiedname>TableGrid::TableGrid</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>nx</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>ny</declname>
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-        <param>
-          <type>int</type>
-          <declname>nz</declname>
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-        <param>
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-          <declname>xmin</declname>
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-        <param>
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-        <param>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
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-<para>Constructor. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/TableGrid.H" line="31" column="3"/>
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-      <memberdef kind="function" id="class_table_grid_1a737446856ac45bc55773fe2e525b54fd" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
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-        <name>Write</name>
-        <qualifiedname>TableGrid::Write</qualifiedname>
-        <reimplements refid="class_three_d_grid_1a52f6cbab42f66577b8d5abd46e1de265">Write</reimplements>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Write output file. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/TableGrid.H" line="40" column="8"/>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>This implementation of <ref refid="class_three_d_grid" kindref="compound">ThreeDGrid</ref> will write ascii files with records of the form X, Y, Z, D1, D2, D3, ... where Dn are the data fields loaded by n called to the <ref refid="class_table_grid_1abc9c53d0f3a7be2c49f3f30a3a591b5c" kindref="member">Add()</ref> member. </para>
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-        <label>TableGrid</label>
-        <link refid="class_table_grid"/>
-        <childnode refid="2" relation="public-inheritance">
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-      <node id="2">
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-        <label>TableGrid</label>
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-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>ThreeDGrid</label>
-        <link refid="class_three_d_grid"/>
-      </node>
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-      <member refid="class_three_d_grid_1a602e5d83286c984b71154d538efa97d5" prot="public" virt="non-virtual"><scope>TableGrid</scope><name>ThreeDGrid</name></member>
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-      <member refid="class_three_d_grid_1a0c2341f1d692d67d03bea2049d72b15e" prot="protected" virt="non-virtual"><scope>TableGrid</scope><name>ymin</name></member>
-      <member refid="class_table_grid_1a48184ddf02c0b77dca8f477cf6326b2a" prot="protected" virt="non-virtual"><scope>TableGrid</scope><name>YY</name></member>
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diff --git a/doxyxml/class_table_slab.xml b/doxyxml/class_table_slab.xml
deleted file mode 100644
index 056221c..0000000
--- a/doxyxml/class_table_slab.xml
+++ /dev/null
@@ -1,76 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_table_slab" kind="class" language="C++" prot="public">
-    <compoundname>TableSlab</compoundname>
-    <includes refid="sltable_m_p2_8_h" local="no">sltableMP2.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_table_slab_1a3467abdaf555d8fe1971e8f01bd78827" prot="public" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd TableSlab::ef</definition>
-        <argsstring></argsstring>
-        <name>ef</name>
-        <qualifiedname>TableSlab::ef</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="32" column="19" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_table_slab_1ab665eb5fd2558fb9e0b2c42bd818bb81" prot="public" static="no" mutable="no">
-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd TableSlab::ev</definition>
-        <argsstring></argsstring>
-        <name>ev</name>
-        <qualifiedname>TableSlab::ev</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="31" column="19" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_table_slab_1afc77ba74303cfdf6f6c3f9a5184d6aec" prot="public" static="no" mutable="no">
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-        <qualifiedname>TableSlab::kx</qualifiedname>
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-        </briefdescription>
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-        <definition>int TableSlab::ky</definition>
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-        <name>ky</name>
-        <qualifiedname>TableSlab::ky</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="29" column="7" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="29" bodyend="-1"/>
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-    <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="25" column="1" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="26" bodyend="33"/>
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-      <member refid="class_table_slab_1afc77ba74303cfdf6f6c3f9a5184d6aec" prot="public" virt="non-virtual"><scope>TableSlab</scope><name>kx</name></member>
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diff --git a/doxyxml/class_table_sph.xml b/doxyxml/class_table_sph.xml
deleted file mode 100644
index 7c6c768..0000000
--- a/doxyxml/class_table_sph.xml
+++ /dev/null
@@ -1,61 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_table_sph" kind="class" language="C++" prot="public">
-    <compoundname>TableSph</compoundname>
-    <includes refid="sltable_m_p2_8_h" local="no">sltableMP2.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="class_table_sph_1a1334ef82102cc5e14c1f7cc00cc6dace" prot="public" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd TableSph::ef</definition>
-        <argsstring></argsstring>
-        <name>ef</name>
-        <qualifiedname>TableSph::ef</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="22" column="19" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="22" bodyend="-1"/>
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-        <type>Eigen::VectorXd</type>
-        <definition>Eigen::VectorXd TableSph::ev</definition>
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-        <qualifiedname>TableSph::ev</qualifiedname>
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-        <qualifiedname>TableSph::l</qualifiedname>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/sltableMP2.H" line="19" column="7" bodyfile="/home/weinberg/Projects/EXP/include/sltableMP2.H" bodystart="19" bodyend="-1"/>
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-      <member refid="class_table_sph_1a1334ef82102cc5e14c1f7cc00cc6dace" prot="public" virt="non-virtual"><scope>TableSph</scope><name>ef</name></member>
-      <member refid="class_table_sph_1a99e249953def5c217eb2c8651a77111c" prot="public" virt="non-virtual"><scope>TableSph</scope><name>ev</name></member>
-      <member refid="class_table_sph_1a1c736c7305aa1356d39033ae264a18f9" prot="public" virt="non-virtual"><scope>TableSph</scope><name>l</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_tapered_mestel_disk.xml b/doxyxml/class_tapered_mestel_disk.xml
deleted file mode 100644
index 7fb8cc6..0000000
--- a/doxyxml/class_tapered_mestel_disk.xml
+++ /dev/null
@@ -1,556 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_tapered_mestel_disk" kind="class" language="C++" prot="public">
-    <compoundname>TaperedMestelDisk</compoundname>
-    <basecompoundref refid="class_mestel_disk" prot="public" virt="non-virtual">MestelDisk</basecompoundref>
-    <includes refid="mestel_8_h" local="no">mestel.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_tapered_mestel_disk_1acc9d4272ee19107fe3da3c489ad84607" prot="private" static="no" mutable="no">
-        <type>std::shared_ptr&lt; <ref refid="class_linear1d" kindref="compound">Linear1d</ref> &gt;</type>
-        <definition>std::shared_ptr&lt;Linear1d&gt; TaperedMestelDisk::interp</definition>
-        <argsstring></argsstring>
-        <name>interp</name>
-        <qualifiedname>TaperedMestelDisk::interp</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="64" column="19" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="64" bodyend="-1"/>
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-        <definition>double TaperedMestelDisk::mu</definition>
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-        <name>mu</name>
-        <qualifiedname>TaperedMestelDisk::mu</qualifiedname>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="68" column="13" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="68" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>nu</name>
-        <qualifiedname>TaperedMestelDisk::nu</qualifiedname>
-        <briefdescription>
-<para>Taper exponents. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="68" column="10" bodyfile="/home/weinberg/Projects/EXP/include/mestel.H" bodystart="68" bodyend="-1"/>
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-        <definition>double TaperedMestelDisk::Ri</definition>
-        <argsstring></argsstring>
-        <name>Ri</name>
-        <qualifiedname>TaperedMestelDisk::Ri</qualifiedname>
-        <briefdescription>
-<para>Inner taper radius. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <qualifiedname>TaperedMestelDisk::Ro</qualifiedname>
-        <briefdescription>
-<para>Outer taper radius. </para>
-        </briefdescription>
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-        <briefdescription>
-<para>Taper factors. </para>
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-        <param>
-          <type>double</type>
-          <declname>L</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-      <memberdef kind="function" id="class_tapered_mestel_disk_1ad985eb7201634305edce026a81424095" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double TaperedMestelDisk::dfde</definition>
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-        <name>dfde</name>
-        <qualifiedname>TaperedMestelDisk::dfde</qualifiedname>
-        <reimplements refid="class_mestel_disk_1ac5915664d0690e8d2a487540ce06501a">dfde</reimplements>
-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
-          <declname>L</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="109" column="10"/>
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-      <memberdef kind="function" id="class_tapered_mestel_disk_1a1debf27dd5007ea752970e8965eac9ff" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double TaperedMestelDisk::dfdl</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfdl</name>
-        <qualifiedname>TaperedMestelDisk::dfdl</qualifiedname>
-        <reimplements refid="class_mestel_disk_1ad743a23293683bff020b2c47facf30b2">dfdl</reimplements>
-        <param>
-          <type>double</type>
-          <declname>E</declname>
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-        <param>
-          <type>double</type>
-          <declname>L</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="111" column="10"/>
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-      <memberdef kind="function" id="class_tapered_mestel_disk_1a24836328a2a4a9357f5ef3c7fc326d72" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>double</type>
-        <definition>double TaperedMestelDisk::distf</definition>
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-        <name>distf</name>
-        <qualifiedname>TaperedMestelDisk::distf</qualifiedname>
-        <reimplements refid="class_mestel_disk_1a169af93ecbedfdd0b42e79463055adf9">distf</reimplements>
-        <param>
-          <type>double</type>
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-        </param>
-        <param>
-          <type>double</type>
-          <declname>L</declname>
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-        <briefdescription>
-<para>Overloaded DF member functions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="107" column="10"/>
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-        <type>double</type>
-        <definition>double TaperedMestelDisk::get_density</definition>
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-        <name>get_density</name>
-        <qualifiedname>TaperedMestelDisk::get_density</qualifiedname>
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-          <type>const double</type>
-          <declname>R</declname>
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-<para>Overloaded density function. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
-        <definition>double TaperedMestelDisk::get_mass</definition>
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-        <reimplements refid="class_mestel_disk_1aa7b4889464c31555a3827e54edd1ae0d">get_mass</reimplements>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
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-        <briefdescription>
-<para>Overloaded cumulative mass function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/mestel.H" line="102" column="10"/>
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-        <name>TaperedMestelDisk</name>
-        <qualifiedname>TaperedMestelDisk::TaperedMestelDisk</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>nu</declname>
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-        <param>
-          <type>double</type>
-          <declname>mu</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Ri</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Ro</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>VROT</declname>
-          <defval>1.0</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>RMIN</declname>
-          <defval>1.0e-6</defval>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>RMAX</declname>
-          <defval>1.0e6</defval>
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-<para>Constructor. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-<para>Doubly tapered Mestel Disk. </para>
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-      <node id="9">
-        <label>GaussQuad</label>
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-      <node id="7">
-        <label>RegularOrbit</label>
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-      <node id="6">
-        <label>SphericalOrbit</label>
-        <link refid="class_spherical_orbit"/>
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-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>angle_grid</edgelabel>
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-          <edgelabel>Gkn</edgelabel>
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-      <node id="1">
-        <label>TaperedMestelDisk</label>
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-        <childnode refid="2" relation="public-inheritance">
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-      <member refid="class_axi_sym_model_1ad3e1a1fcfe55dfa0f9332673faaad460" prot="protected" virt="non-virtual"><scope>TaperedMestelDisk</scope><name>gen_firstime</name></member>
-      <member refid="class_axi_sym_model_1a0256603484bb0820fe8ec15cc0f88a84" prot="protected" virt="non-virtual"><scope>TaperedMestelDisk</scope><name>gen_firstime_E</name></member>
-      <member refid="class_axi_sym_model_1a16b08425c760dcb7fe24635c05a4d9b1" prot="protected" virt="non-virtual"><scope>TaperedMestelDisk</scope><name>gen_firstime_jeans</name></member>
-      <member refid="class_axi_sym_model_1a5b9f30c0297a19e48806f53aa6b9d68e" prot="protected" virt="non-virtual"><scope>TaperedMestelDisk</scope><name>gen_fmax</name></member>
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-      <member refid="class_axi_sym_model_1a1df0ddafb9d52556b7306aac0b4d1390" prot="public" virt="non-virtual"><scope>TaperedMestelDisk</scope><name>gen_kmin</name></member>
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-      <member refid="class_axi_sym_model_1ac697c676c4cdf1a2f6fd9aaa0afc3cf1" prot="public" virt="non-virtual"><scope>TaperedMestelDisk</scope><name>gen_N</name></member>
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-      <member refid="class_axi_sym_model_1a20602aa25410c1f5d2bc3bf017899049" prot="protected" virt="non-virtual"><scope>TaperedMestelDisk</scope><name>gen_point_3d</name></member>
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-      <member refid="class_mestel_disk_1a71dfc91bc5793d2d0d6d528a307d2243" prot="public" virt="virtual"><scope>TaperedMestelDisk</scope><name>get_dpot2</name></member>
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diff --git a/doxyxml/class_three_d_grid.xml b/doxyxml/class_three_d_grid.xml
deleted file mode 100644
index ba2c2aa..0000000
--- a/doxyxml/class_three_d_grid.xml
+++ /dev/null
@@ -1,309 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_three_d_grid" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>ThreeDGrid</compoundname>
-    <derivedcompoundref refid="class_data_grid" prot="public" virt="non-virtual">DataGrid</derivedcompoundref>
-    <derivedcompoundref refid="class_table_grid" prot="public" virt="non-virtual">TableGrid</derivedcompoundref>
-    <derivedcompoundref refid="class_vtk_grid" prot="public" virt="non-virtual">VtkGrid</derivedcompoundref>
-    <includes refid="_three_d_grid_8_h" local="no">ThreeDGrid.H</includes>
-    <sectiondef kind="protected-attrib">
-      <memberdef kind="variable" id="class_three_d_grid_1af3f15bb9f7dcca996ff9ead3daecc12c" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ThreeDGrid::nx</definition>
-        <argsstring></argsstring>
-        <name>nx</name>
-        <qualifiedname>ThreeDGrid::nx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="21" column="7" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="21" bodyend="-1"/>
-        <referencedby refid="class_data_grid_1ab07533b097a221024850ae1b669df297" compoundref="_data_grid_8_h" startline="29" endline="48">DataGrid::DataGrid</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_three_d_grid_1a8fed9b8b37fd120d334ecf4558f0c0d1" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ThreeDGrid::ny</definition>
-        <argsstring></argsstring>
-        <name>ny</name>
-        <qualifiedname>ThreeDGrid::ny</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="21" column="10" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="21" bodyend="-1"/>
-        <referencedby refid="class_data_grid_1ab07533b097a221024850ae1b669df297" compoundref="_data_grid_8_h" startline="29" endline="48">DataGrid::DataGrid</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_three_d_grid_1a72b74fa12c115f82a70dd844811a8911" prot="protected" static="no" mutable="no">
-        <type>int</type>
-        <definition>int ThreeDGrid::nz</definition>
-        <argsstring></argsstring>
-        <name>nz</name>
-        <qualifiedname>ThreeDGrid::nz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="21" column="13" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="21" bodyend="-1"/>
-        <referencedby refid="class_data_grid_1ab07533b097a221024850ae1b669df297" compoundref="_data_grid_8_h" startline="29" endline="48">DataGrid::DataGrid</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_three_d_grid_1a575fb5d71a08509ff618f683682b3627" prot="protected" static="no" mutable="no">
-        <type>float</type>
-        <definition>float ThreeDGrid::xmax</definition>
-        <argsstring></argsstring>
-        <name>xmax</name>
-        <qualifiedname>ThreeDGrid::xmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="22" column="14" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_data_grid_1ab07533b097a221024850ae1b669df297" compoundref="_data_grid_8_h" startline="29" endline="48">DataGrid::DataGrid</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_three_d_grid_1a5ae56bdafe5245e3ce50f366e39cfe85" prot="protected" static="no" mutable="no">
-        <type>float</type>
-        <definition>float ThreeDGrid::xmin</definition>
-        <argsstring></argsstring>
-        <name>xmin</name>
-        <qualifiedname>ThreeDGrid::xmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="22" column="9" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_data_grid_1ab07533b097a221024850ae1b669df297" compoundref="_data_grid_8_h" startline="29" endline="48">DataGrid::DataGrid</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="class_three_d_grid_1a98c1af92014aa52cb1483ed89e0f9e94" prot="protected" static="no" mutable="no">
-        <type>float</type>
-        <definition>float ThreeDGrid::ymax</definition>
-        <argsstring></argsstring>
-        <name>ymax</name>
-        <qualifiedname>ThreeDGrid::ymax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="22" column="24" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="22" bodyend="-1"/>
-        <referencedby refid="class_data_grid_1ab07533b097a221024850ae1b669df297" compoundref="_data_grid_8_h" startline="29" endline="48">DataGrid::DataGrid</referencedby>
-      </memberdef>
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-        <type>float</type>
-        <definition>float ThreeDGrid::ymin</definition>
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-        <name>ymin</name>
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-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="22" column="19" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="22" bodyend="-1"/>
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-        <qualifiedname>ThreeDGrid::zmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="22" column="34" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="22" bodyend="-1"/>
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-        <definition>float ThreeDGrid::zmin</definition>
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-        <name>zmin</name>
-        <qualifiedname>ThreeDGrid::zmin</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="22" column="29" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="22" bodyend="-1"/>
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-      </memberdef>
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-        <type>void</type>
-        <definition>virtual void ThreeDGrid::Add</definition>
-        <argsstring>(const std::vector&lt; double &gt; &amp;data, const std::string &amp;name)=0</argsstring>
-        <name>Add</name>
-        <qualifiedname>ThreeDGrid::Add</qualifiedname>
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-        <reimplementedby refid="class_table_grid_1abc9c53d0f3a7be2c49f3f30a3a591b5c">Add</reimplementedby>
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-<para>Add a data field to the rectangular grid database. </para>
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-<para>Null constructor. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="37" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="37" bodyend="40"/>
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-<para>Constructor. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" line="27" column="3" bodyfile="/home/weinberg/Projects/EXP/include/ThreeDGrid.H" bodystart="27" bodyend="34"/>
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-        <qualifiedname>ThreeDGrid::Write</qualifiedname>
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-<para>Write output file. </para>
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-    <detaileddescription>
-<para>This is an API for populating a 3d grid rectangular grid database for diagnostic output.</para>
-<para>The user provides the size of the grid and extents. Calls to <ref refid="class_three_d_grid_1affe7a7b6bca0874f96c654ae34c8190a" kindref="member">Add()</ref> add additiional data fields with the predefined rectangular grid shape. The input array is flattened and packed in C (not Fortran) order. A call to <ref refid="class_three_d_grid_1a52f6cbab42f66577b8d5abd46e1de265" kindref="member">Write()</ref> dumps the array in the format implemented by the derived class. </para>
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diff --git a/doxyxml/class_time.xml b/doxyxml/class_time.xml
deleted file mode 100644
index f17567f..0000000
--- a/doxyxml/class_time.xml
+++ /dev/null
@@ -1,104 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_time" kind="class" language="C++" prot="public">
-    <compoundname>Time</compoundname>
-    <includes refid="chk_timer_8_h" local="no">chkTimer.H</includes>
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-        <type>time_t</type>
-        <definition>time_t Time::t</definition>
-        <argsstring></argsstring>
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-        <qualifiedname>Time::t</qualifiedname>
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-<para>std output stream manipulator </para>
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diff --git a/doxyxml/class_timer.xml b/doxyxml/class_timer.xml
deleted file mode 100644
index fab3f33..0000000
--- a/doxyxml/class_timer.xml
+++ /dev/null
@@ -1,264 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-        <definition>std::chrono::high_resolution_clock::time_point Timer::begin</definition>
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-        <qualifiedname>Timer::begin</qualifiedname>
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-        <argsstring></argsstring>
-        <name>end</name>
-        <qualifiedname>Timer::end</qualifiedname>
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-<para>The time measured so far. </para>
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diff --git a/doxyxml/class_tipsy_reader_1_1_tipsy_file.xml b/doxyxml/class_tipsy_reader_1_1_tipsy_file.xml
deleted file mode 100644
index c2ae72c..0000000
--- a/doxyxml/class_tipsy_reader_1_1_tipsy_file.xml
+++ /dev/null
@@ -1,197 +0,0 @@
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-        <type>void</type>
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-        <name>read_gas</name>
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-        </childnode>
-      </node>
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-        <label>TipsyReader::Header</label>
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diff --git a/doxyxml/class_tipsy_reader_1_1_tipsy_native.xml b/doxyxml/class_tipsy_reader_1_1_tipsy_native.xml
deleted file mode 100644
index 20b4039..0000000
--- a/doxyxml/class_tipsy_reader_1_1_tipsy_native.xml
+++ /dev/null
@@ -1,282 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_tipsy_reader_1_1_tipsy_native" kind="class" language="C++" prot="public">
-    <compoundname>TipsyReader::TipsyNative</compoundname>
-    <basecompoundref refid="class_tipsy_reader_1_1_tipsy_file" prot="public" virt="non-virtual">TipsyReader::TipsyFile</basecompoundref>
-    <includes refid="tipsy_8_h" local="no">tipsy.H</includes>
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-        <type>std::ifstream</type>
-        <definition>std::ifstream TipsyReader::TipsyNative::input</definition>
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-        <name>input</name>
-        <qualifiedname>TipsyReader::TipsyNative::input</qualifiedname>
-        <briefdescription>
-<para>The input file stream. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="242" column="19" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="242" bodyend="-1"/>
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-        <type>class</type>
-        <definition>friend class PR::Tipsy</definition>
-        <argsstring></argsstring>
-        <name>PR::Tipsy</name>
-        <qualifiedname>TipsyReader::TipsyNative::Tipsy</qualifiedname>
-        <param>
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-        <type>int</type>
-        <definition>int TipsyReader::TipsyNative::native_header</definition>
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-        <name>native_header</name>
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-<para>Read the header. </para>
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-        <argsstring>()</argsstring>
-        <name>read_dark</name>
-        <qualifiedname>TipsyReader::TipsyNative::read_dark</qualifiedname>
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-        <type>void</type>
-        <definition>void TipsyReader::TipsyNative::read_gas</definition>
-        <argsstring>()</argsstring>
-        <name>read_gas</name>
-        <qualifiedname>TipsyReader::TipsyNative::read_gas</qualifiedname>
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-        <definition>int TipsyReader::TipsyNative::readParticles</definition>
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diff --git a/doxyxml/class_toomre_disk.xml b/doxyxml/class_toomre_disk.xml
deleted file mode 100644
index 186030b..0000000
--- a/doxyxml/class_toomre_disk.xml
+++ /dev/null
@@ -1,575 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_toomre_disk" kind="class" language="C++" prot="public">
-    <compoundname>ToomreDisk</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
-    <includes refid="toomre_8_h" local="no">toomre.H</includes>
-    <sectiondef kind="private-attrib">
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-        <type>double</type>
-        <definition>double ToomreDisk::e</definition>
-        <argsstring></argsstring>
-        <name>e</name>
-        <qualifiedname>ToomreDisk::e</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>m</name>
-        <qualifiedname>ToomreDisk::m</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <name>p0</name>
-        <qualifiedname>ToomreDisk::p0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <argsstring></argsstring>
-        <name>p1</name>
-        <qualifiedname>ToomreDisk::p1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <briefdescription>
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-        <name>rmax</name>
-        <qualifiedname>ToomreDisk::rmax</qualifiedname>
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diff --git a/doxyxml/class_transform_f_f_t.xml b/doxyxml/class_transform_f_f_t.xml
deleted file mode 100644
index 96fd654..0000000
--- a/doxyxml/class_transform_f_f_t.xml
+++ /dev/null
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diff --git a/doxyxml/class_truncated.xml b/doxyxml/class_truncated.xml
deleted file mode 100644
index 6623647..0000000
--- a/doxyxml/class_truncated.xml
+++ /dev/null
@@ -1,182 +0,0 @@
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diff --git a/doxyxml/class_two_center.xml b/doxyxml/class_two_center.xml
deleted file mode 100644
index 28eb8e2..0000000
--- a/doxyxml/class_two_center.xml
+++ /dev/null
@@ -1,874 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_two_center" kind="class" language="C++" prot="public" abstract="yes">
-    <compoundname>TwoCenter</compoundname>
-    <basecompoundref refid="class_pot_accel" prot="public" virt="non-virtual">PotAccel</basecompoundref>
-    <derivedcompoundref refid="class_e_jcom" prot="public" virt="non-virtual">EJcom</derivedcompoundref>
-    <includes refid="_two_center_8_h" local="no">TwoCenter.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="class_two_center_1a4697b2679e1325a3cfc78ab80b094784" prot="public" static="no">
-        <type>double(TwoCenter::*</type>
-        <definition>typedef double(TwoCenter::* TwoCenter::mixFunc) (double *p)</definition>
-        <argsstring>)(double *p)</argsstring>
-        <name>mixFunc</name>
-        <qualifiedname>TwoCenter::mixFunc</qualifiedname>
-        <briefdescription>
-<para>The mixture function. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="87" column="11" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="87" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_two_center_1a0246092f794de8555a99d3b0ebe86abf" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string TwoCenter::basis</definition>
-        <argsstring></argsstring>
-        <name>basis</name>
-        <qualifiedname>TwoCenter::basis</qualifiedname>
-        <briefdescription>
-<para>The name of the basis (for reflection) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="45" column="10" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="45" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" prot="private" static="no" mutable="no">
-        <type><ref refid="class_basis" kindref="compound">Basis</ref> *</type>
-        <definition>Basis* TwoCenter::exp_in</definition>
-        <argsstring></argsstring>
-        <name>exp_in</name>
-        <qualifiedname>TwoCenter::exp_in</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="40" column="10" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="40" bodyend="-1"/>
-        <referencedby refid="class_two_center_1ac29938dc6a1d4c9af4f9166b9b04d249" compoundref="_two_center_8_h" startline="165" endline="169">multistep_debug</referencedby>
-        <referencedby refid="class_two_center_1ac3c9e0ae37c6e7aaab40e7cac2475a26" compoundref="_two_center_8_h" startline="159" endline="163">multistep_reset</referencedby>
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-        <referencedby refid="class_two_center_1a5d42adc520d7f5a7353ddd893990b5cd" compoundref="_two_center_8_h" startline="141" endline="145">multistep_update_begin</referencedby>
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-        <type><ref refid="class_basis" kindref="compound">Basis</ref> *</type>
-        <definition>Basis* TwoCenter::exp_out</definition>
-        <argsstring></argsstring>
-        <name>exp_out</name>
-        <qualifiedname>TwoCenter::exp_out</qualifiedname>
-        <briefdescription>
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-        <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
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-        <name>mix_in</name>
-        <qualifiedname>TwoCenter::mix_in</qualifiedname>
-        <briefdescription>
-<para>Mixture containers for each basis. </para>
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-        <detaileddescription>
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-        </inbodydescription>
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-        <type><ref refid="class_mixture_basis" kindref="compound">MixtureBasis</ref> *</type>
-        <definition>MixtureBasis * TwoCenter::mix_out</definition>
-        <argsstring></argsstring>
-        <name>mix_out</name>
-        <qualifiedname>TwoCenter::mix_out</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="52" column="23" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="52" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double TwoCenter::dz</definition>
-        <argsstring></argsstring>
-        <name>dz</name>
-        <qualifiedname>TwoCenter::dz</qualifiedname>
-        <briefdescription>
-<para>The bin spacing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="72" column="10" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="72" bodyend="-1"/>
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-        <type>vector&lt; double &gt;</type>
-        <definition>vector&lt;double&gt; TwoCenter::histo</definition>
-        <argsstring></argsstring>
-        <name>histo</name>
-        <qualifiedname>TwoCenter::histo</qualifiedname>
-        <briefdescription>
-<para>The histogram bins. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="78" column="10" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="78" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>nhisto</name>
-        <qualifiedname>TwoCenter::nhisto</qualifiedname>
-        <briefdescription>
-<para>Number of bins. </para>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <type>string</type>
-        <definition>string TwoCenter::ohisto</definition>
-        <argsstring></argsstring>
-        <name>ohisto</name>
-        <qualifiedname>TwoCenter::ohisto</qualifiedname>
-        <briefdescription>
-<para>Name for the histogram file. </para>
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-        <type>const std::set&lt; std::string &gt;</type>
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-        <argsstring></argsstring>
-        <name>valid_keys</name>
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-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
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-        <type>vector&lt; double &gt;</type>
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-        <briefdescription>
-<para>INNER center for current component. </para>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="91" column="10" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="91" bodyend="-1"/>
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-        <briefdescription>
-<para>OUTER center for current component. </para>
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-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="94" column="10" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="94" bodyend="-1"/>
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-        <name>determine_acceleration_and_potential_thread</name>
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-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
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-        <briefdescription>
-<para>Multithreading implementation of the force computation. </para>
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-        <type>void *</type>
-        <definition>void * TwoCenter::determine_coefficients_thread</definition>
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-        <name>determine_coefficients_thread</name>
-        <qualifiedname>TwoCenter::determine_coefficients_thread</qualifiedname>
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-          <type>void *</type>
-          <declname>arg</declname>
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-        <briefdescription>
-<para>The required force members, but this class does not multithread directly. </para>
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-          <declname>value</declname>
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-      <memberdef kind="function" id="class_two_center_1af6341c0c9211c12fc6980c2bee31f077" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double TwoCenter::Cmixture</definition>
-        <argsstring>(double *p)</argsstring>
-        <name>Cmixture</name>
-        <qualifiedname>TwoCenter::Cmixture</qualifiedname>
-        <param>
-          <type>double *</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>The complement of the mixture function, also in [0,1]. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="122" column="10" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="122" bodyend="122"/>
-        <references refid="class_two_center_1aed04abf7863ba4d9e7e059593f5cecdd">mixture</references>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1a0a597e62e05bd437540412fdd1dd0ba5" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void TwoCenter::determine_coefficients</definition>
-        <argsstring>(Component *c)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>TwoCenter::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724">determine_coefficients</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>Call <ref refid="class_basis" kindref="compound">Basis</ref> routines to make coefficients. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="108" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1a92e47a350f1483a891a69d9972d5af59" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void TwoCenter::determine_coefficients</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_coefficients</name>
-        <qualifiedname>TwoCenter::determine_coefficients</qualifiedname>
-        <reimplements refid="class_pot_accel_1a30dac3c15c2a7a67e9860e086cda27b8">determine_coefficients</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Used by get_acceleration_and_potential to request that the expansion be performed. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="109" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1ac08ca04cfea84f1c816c7a1645389c6b" prot="public" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void TwoCenter::get_acceleration_and_potential</definition>
-        <argsstring>(Component *)</argsstring>
-        <name>get_acceleration_and_potential</name>
-        <qualifiedname>TwoCenter::get_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_pot_accel_1ab78f20762031db204f636fc8e74ea986">get_acceleration_and_potential</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        </param>
-        <briefdescription>
-<para>Main force evaluation routine: cycle through each grid. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="113" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1aed04abf7863ba4d9e7e059593f5cecdd" prot="public" static="no" const="no" explicit="no" inline="no" virt="pure-virtual">
-        <type>double</type>
-        <definition>virtual double TwoCenter::mixture</definition>
-        <argsstring>(double *p)=0</argsstring>
-        <name>mixture</name>
-        <qualifiedname>TwoCenter::mixture</qualifiedname>
-        <reimplementedby refid="class_e_jcom_1ae04818161d9df4becfdd3d34146ec8ac">mixture</reimplementedby>
-        <param>
-          <type>double *</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-<para>Mixture function for the two expansions. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>To be provided: must return a value in [0,1] </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="119" column="18"/>
-        <referencedby refid="class_two_center_1af6341c0c9211c12fc6980c2bee31f077" compoundref="_two_center_8_h" startline="122" endline="122">Cmixture</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1ac29938dc6a1d4c9af4f9166b9b04d249" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void TwoCenter::multistep_debug</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_debug</name>
-        <qualifiedname>TwoCenter::multistep_debug</qualifiedname>
-        <reimplements refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121">multistep_debug</reimplements>
-        <briefdescription>
-<para>Print debug info. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="165" column="16" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="165" bodyend="169"/>
-        <references refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" compoundref="_two_center_8_h" startline="40">exp_in</references>
-        <references refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" compoundref="_two_center_8_h" startline="41">exp_out</references>
-        <references refid="class_two_center_1ac29938dc6a1d4c9af4f9166b9b04d249" compoundref="_two_center_8_h" startline="165" endline="169">multistep_debug</references>
-        <referencedby refid="class_two_center_1ac29938dc6a1d4c9af4f9166b9b04d249" compoundref="_two_center_8_h" startline="165" endline="169">multistep_debug</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1ac3c9e0ae37c6e7aaab40e7cac2475a26" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void TwoCenter::multistep_reset</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_reset</name>
-        <qualifiedname>TwoCenter::multistep_reset</qualifiedname>
-        <reimplements refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f">multistep_reset</reimplements>
-        <briefdescription>
-<para>Reset data for multistep. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="159" column="16" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="159" bodyend="163"/>
-        <references refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" compoundref="_two_center_8_h" startline="40">exp_in</references>
-        <references refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" compoundref="_two_center_8_h" startline="41">exp_out</references>
-        <references refid="class_two_center_1ac3c9e0ae37c6e7aaab40e7cac2475a26" compoundref="_two_center_8_h" startline="159" endline="163">multistep_reset</references>
-        <referencedby refid="class_two_center_1ac3c9e0ae37c6e7aaab40e7cac2475a26" compoundref="_two_center_8_h" startline="159" endline="163">multistep_reset</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1a9840bdb9f5c27ce8f2d7d57013dd0b0a" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void TwoCenter::multistep_update</definition>
-        <argsstring>(int cur, int next, Component *c, int i, int id)</argsstring>
-        <name>multistep_update</name>
-        <qualifiedname>TwoCenter::multistep_update</qualifiedname>
-        <reimplements refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a">multistep_update</reimplements>
-        <param>
-          <type>int</type>
-          <declname>cur</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>next</declname>
-        </param>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>i</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>id</declname>
-        </param>
-        <briefdescription>
-<para>Implementation of level shifts. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="147" column="16" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="147" bodyend="151"/>
-        <references refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" compoundref="_two_center_8_h" startline="40">exp_in</references>
-        <references refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" compoundref="_two_center_8_h" startline="41">exp_out</references>
-        <references refid="class_two_center_1a9840bdb9f5c27ce8f2d7d57013dd0b0a" compoundref="_two_center_8_h" startline="147" endline="151">multistep_update</references>
-        <referencedby refid="class_two_center_1a9840bdb9f5c27ce8f2d7d57013dd0b0a" compoundref="_two_center_8_h" startline="147" endline="151">multistep_update</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1a5d42adc520d7f5a7353ddd893990b5cd" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void TwoCenter::multistep_update_begin</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_begin</name>
-        <qualifiedname>TwoCenter::multistep_update_begin</qualifiedname>
-        <reimplements refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381">multistep_update_begin</reimplements>
-        <briefdescription>
-<para>Execute to begin level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Update the multi time step force algorithm when moving particle <computeroutput>i</computeroutput> from level <computeroutput>cur</computeroutput> to level <computeroutput>next</computeroutput> </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="141" column="16" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="141" bodyend="145"/>
-        <references refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" compoundref="_two_center_8_h" startline="40">exp_in</references>
-        <references refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" compoundref="_two_center_8_h" startline="41">exp_out</references>
-        <references refid="class_two_center_1a5d42adc520d7f5a7353ddd893990b5cd" compoundref="_two_center_8_h" startline="141" endline="145">multistep_update_begin</references>
-        <referencedby refid="class_two_center_1a5d42adc520d7f5a7353ddd893990b5cd" compoundref="_two_center_8_h" startline="141" endline="145">multistep_update_begin</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1ae6080a5f19f8c92a75579a2d90776bd7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void TwoCenter::multistep_update_finish</definition>
-        <argsstring>()</argsstring>
-        <name>multistep_update_finish</name>
-        <qualifiedname>TwoCenter::multistep_update_finish</qualifiedname>
-        <reimplements refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e">multistep_update_finish</reimplements>
-        <briefdescription>
-<para>Execute to finish level shifts for particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="153" column="16" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="153" bodyend="157"/>
-        <references refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" compoundref="_two_center_8_h" startline="40">exp_in</references>
-        <references refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" compoundref="_two_center_8_h" startline="41">exp_out</references>
-        <references refid="class_two_center_1ae6080a5f19f8c92a75579a2d90776bd7" compoundref="_two_center_8_h" startline="153" endline="157">multistep_update_finish</references>
-        <referencedby refid="class_two_center_1ae6080a5f19f8c92a75579a2d90776bd7" compoundref="_two_center_8_h" startline="153" endline="157">multistep_update_finish</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void TwoCenter::RegisterComponent</definition>
-        <argsstring>(Component *c)</argsstring>
-        <name>RegisterComponent</name>
-        <qualifiedname>TwoCenter::RegisterComponent</qualifiedname>
-        <reimplements refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb">RegisterComponent</reimplements>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c</declname>
-        </param>
-        <briefdescription>
-<para>For access to parent component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="126" column="16" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="126" bodyend="130"/>
-        <references refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" compoundref="_pot_accel_8_h" startline="56">PotAccel::component</references>
-        <references refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" compoundref="_two_center_8_h" startline="40">exp_in</references>
-        <references refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" compoundref="_two_center_8_h" startline="41">exp_out</references>
-        <references refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" compoundref="_two_center_8_h" startline="126" endline="130">RegisterComponent</references>
-        <referencedby refid="class_two_center_1a7ce7e41b10ddda4a7fc67b72d901f0e7" compoundref="_two_center_8_h" startline="126" endline="130">RegisterComponent</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1afc027c542932d0fb5c23365730c7a225" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>void</type>
-        <definition>virtual void TwoCenter::set_multistep_level</definition>
-        <argsstring>(unsigned n)</argsstring>
-        <name>set_multistep_level</name>
-        <qualifiedname>TwoCenter::set_multistep_level</qualifiedname>
-        <reimplements refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f">set_multistep_level</reimplements>
-        <param>
-          <type>unsigned</type>
-          <declname>n</declname>
-        </param>
-        <briefdescription>
-<para>Multistepping routines: call the basis members for each component. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="134" column="16" bodyfile="/home/weinberg/Projects/EXP/src/TwoCenter.H" bodystart="134" bodyend="139"/>
-        <references refid="class_two_center_1a8cce6cd013f0a4838d6a95c926dc36d6" compoundref="_two_center_8_h" startline="40">exp_in</references>
-        <references refid="class_two_center_1a5fdd1cccfed67156eb646eca45cf1121" compoundref="_two_center_8_h" startline="41">exp_out</references>
-        <references refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" compoundref="_pot_accel_8_h" startline="80">PotAccel::mlevel</references>
-        <references refid="class_two_center_1afc027c542932d0fb5c23365730c7a225" compoundref="_two_center_8_h" startline="134" endline="139">set_multistep_level</references>
-        <referencedby refid="class_two_center_1afc027c542932d0fb5c23365730c7a225" compoundref="_two_center_8_h" startline="134" endline="139">set_multistep_level</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1a9489bd2add9e9d423e03b0854348d293" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>TwoCenter::TwoCenter</definition>
-        <argsstring>(Component *c0, const YAML::Node &amp;conf)</argsstring>
-        <name>TwoCenter</name>
-        <qualifiedname>TwoCenter::TwoCenter</qualifiedname>
-        <param>
-          <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-          <declname>c0</declname>
-        </param>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Constructor <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>c0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the instantiating caller (a <ref refid="class_component" kindref="compound">Component</ref>) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>line</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>passes any parameters (rsphSL, rmin and numr) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="100" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_two_center_1a02ec2f56f013952ba88fe3db67d52c9d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>TwoCenter::~TwoCenter</definition>
-        <argsstring>()</argsstring>
-        <name>~TwoCenter</name>
-        <qualifiedname>TwoCenter::~TwoCenter</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoCenter.H" line="103" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Computes the potential, acceleration and density using two basis sets with different expansion centers</para>
-<para>This class provides a virtual member &quot;mixture(double *pos)&quot; that must be implemented by a derived class to provide the mixture function for associating particles with a force center for gravitational field determination. <ref refid="class_e_jcom" kindref="compound">EJcom</ref> is an example of an implementation using an erf-based ramp whose argument is the distance from the particle to the inner center and the width is the distance between the centers.</para>
-<para>All parameters are parsed by the underlying basis instances for the two centers. There is only one diagnostic parameter:</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>nhisto</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>enables diagnostic output of mixture distribution if set to a value larger than 1</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>basis</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the name of the force method to use for the two-center expansion. Available types are: &quot;bessel&quot; (<ref refid="class_bessel" kindref="compound">Bessel</ref>), &quot;sphereSL&quot; (<ref refid="class_sphere" kindref="compound">Sphere</ref>), &quot;cylinder&quot; (<ref refid="class_cylinder" kindref="compound">Cylinder</ref>). </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="3">
-        <label>EJcom</label>
-        <link refid="class_e_jcom"/>
-        <childnode refid="1" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="1">
-        <label>TwoCenter</label>
-        <link refid="class_two_center"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="8">
-        <label>Basis</label>
-        <link refid="class_basis"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
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diff --git a/doxyxml/class_two_d_coefs.xml b/doxyxml/class_two_d_coefs.xml
deleted file mode 100644
index de32a80..0000000
--- a/doxyxml/class_two_d_coefs.xml
+++ /dev/null
@@ -1,273 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_two_d_coefs" kind="class" language="C++" prot="public">
-    <compoundname>TwoDCoefs</compoundname>
-    <includes refid="_two_d_coefs_8_h" local="no">TwoDCoefs.H</includes>
-    <innerclass refid="struct_two_d_coefs_1_1_coefs" prot="public">TwoDCoefs::Coefs</innerclass>
-    <sectiondef kind="public-type">
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-        <type>std::shared_ptr&lt; <ref refid="struct_two_d_coefs_1_1_coefs" kindref="compound">Coefs</ref> &gt;</type>
-        <definition>using TwoDCoefs::CoefPtr =  std::shared_ptr&lt;Coefs&gt;</definition>
-        <argsstring></argsstring>
-        <name>CoefPtr</name>
-        <qualifiedname>TwoDCoefs::CoefPtr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" line="47" column="3" bodyfile="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" bodystart="47" bodyend="-1"/>
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-      <memberdef kind="typedef" id="class_two_d_coefs_1ac49f9b42238f6b030ebb8729771127c9" prot="public" static="no">
-        <type>std::shared_ptr&lt; Eigen::MatrixXd &gt;</type>
-        <definition>using TwoDCoefs::DataPtr =  std::shared_ptr&lt;Eigen::MatrixXd&gt;</definition>
-        <argsstring></argsstring>
-        <name>DataPtr</name>
-        <qualifiedname>TwoDCoefs::DataPtr</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" line="19" column="3" bodyfile="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" bodystart="19" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="class_two_d_coefs_1a22683b3133518e0133b4b3a1895c1ea8" prot="public" static="no">
-        <type>std::tuple&lt; unsigned, unsigned &gt;</type>
-        <definition>using TwoDCoefs::LMkey =  std::tuple&lt;unsigned, unsigned&gt;</definition>
-        <argsstring></argsstring>
-        <name>LMkey</name>
-        <qualifiedname>TwoDCoefs::LMkey</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" line="35" column="3" bodyfile="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_two_d_coefs_1a23a7714edcf94430d5f8994a1ea33a98" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TwoDCoefs::ndigits</definition>
-        <argsstring></argsstring>
-        <name>ndigits</name>
-        <qualifiedname>TwoDCoefs::ndigits</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" line="23" column="7" bodyfile="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" bodystart="23" bodyend="-1"/>
-        <referencedby refid="class_two_d_coefs_1a48f5d79bd035382daa586627e273a766" compoundref="_two_d_coefs_8_h" startline="25" endline="29">to_ndigits</referencedby>
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diff --git a/doxyxml/class_ultra.xml b/doxyxml/class_ultra.xml
deleted file mode 100644
index 010990b..0000000
--- a/doxyxml/class_ultra.xml
+++ /dev/null
@@ -1,260 +0,0 @@
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diff --git a/doxyxml/class_user_bar.xml b/doxyxml/class_user_bar.xml
deleted file mode 100644
index 985c8ce..0000000
--- a/doxyxml/class_user_bar.xml
+++ /dev/null
@@ -1,820 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_user_bar" kind="class" language="C++" prot="public">
-    <compoundname>UserBar</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_user_bar_8_h" local="no">UserBar.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_user_bar_1a32915737cdc9020f08b4a4bd3e26f11f" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserBar::afac</definition>
-        <argsstring></argsstring>
-        <name>afac</name>
-        <qualifiedname>UserBar::afac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="41" column="32" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="41" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_user_bar_1addfef4c8d76924516618875ef8f30ded" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserBar::amplitude</definition>
-        <argsstring></argsstring>
-        <name>amplitude</name>
-        <qualifiedname>UserBar::amplitude</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="34" column="31" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_bar_1a09b5c8ba36a1f0b5c215a5bb0f067f05" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string UserBar::angm_name</definition>
-        <argsstring></argsstring>
-        <name>angm_name</name>
-        <qualifiedname>UserBar::angm_name</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="27" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_bar_1ab91a4395c140e0eff18b2069ef40ac8e" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserBar::b5</definition>
-        <argsstring></argsstring>
-        <name>b5</name>
-        <qualifiedname>UserBar::b5</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="41" column="37" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="41" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double UserBar::bratio</definition>
-        <argsstring></argsstring>
-        <name>bratio</name>
-        <qualifiedname>UserBar::bratio</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="34" column="17" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_bar_1a6498d6863d62549802d07d7fb862ae40" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* UserBar::c0</definition>
-        <argsstring></argsstring>
-        <name>c0</name>
-        <qualifiedname>UserBar::c0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="28" column="13" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="28" bodyend="-1"/>
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-        <name>c1</name>
-        <qualifiedname>UserBar::c1</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>cratio</name>
-        <qualifiedname>UserBar::cratio</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="34" column="24" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="34" bodyend="-1"/>
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-        <briefdescription>
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-        <briefdescription>
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-        <qualifiedname>UserBar::Fcorot</qualifiedname>
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-        <detaileddescription>
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-        <qualifiedname>UserBar::filename</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="36" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="36" bodyend="-1"/>
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-        <type>bool</type>
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-        <qualifiedname>UserBar::firstime</qualifiedname>
-        <briefdescription>
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-        <type>double</type>
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-        <argsstring></argsstring>
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-        <qualifiedname>UserBar::Iz</qualifiedname>
-        <briefdescription>
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-        <detaileddescription>
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-        <type>double</type>
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-        <briefdescription>
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-        <detaileddescription>
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-        <type>double</type>
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-        <argsstring></argsstring>
-        <name>lasttime</name>
-        <qualifiedname>UserBar::lasttime</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="40" column="27" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="40" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double UserBar::length</definition>
-        <argsstring></argsstring>
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-        <qualifiedname>UserBar::length</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/src/user/UserBar.H" line="34" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserBar.H" bodystart="34" bodyend="-1"/>
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-        <name>name</name>
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-        <detaileddescription>
-        </detaileddescription>
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-        <type>double</type>
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-        <name>omega</name>
-        <qualifiedname>UserBar::omega</qualifiedname>
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-        </briefdescription>
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-        </detaileddescription>
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-        </inbodydescription>
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-        <type>double</type>
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-        <name>posang</name>
-        <qualifiedname>UserBar::posang</qualifiedname>
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-        </briefdescription>
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-        <argsstring></argsstring>
-        <name>soft</name>
-        <qualifiedname>UserBar::soft</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        </detaileddescription>
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-        </inbodydescription>
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-        <name>Toff</name>
-        <qualifiedname>UserBar::Toff</qualifiedname>
-        <briefdescription>
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-        </detaileddescription>
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-        <name>Ton</name>
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-        <argsstring></argsstring>
-        <name>valid_keys</name>
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-<para>Valid keys for YAML configurations. </para>
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-        </inbodydescription>
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-<para>Called to evaluate acceleration Default version calls the provided thread function. Can be overloaded to provide additional non-threaded tasks. </para>
-        </detaileddescription>
-        <inbodydescription>
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-        <type>void *</type>
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-        <argsstring>(void *arg)</argsstring>
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-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
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-        </inbodydescription>
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-        <type>void</type>
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-        <qualifiedname>UserBar::initialize</qualifiedname>
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-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
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-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
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-<para>Constructor. </para>
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-<para>Destructor. </para>
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-<para>Bar rotating at specified fraction of corotation</para>
-<para><parameterlist kind="param"><parameteritem>
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-<parametername>length</parametername>
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-<para>is the bar length </para>
-</parameterdescription>
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-<parameteritem>
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-<parametername>bratio</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the ratio of the submajor axis to the major axis </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>cratio</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the ratio of the minor axis to the submajor axis </para>
-</parameterdescription>
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-<parameteritem>
-<parameternamelist>
-<parametername>amp</parametername>
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-<para>is the bar amplitude in fraction of the monopole mass </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Ton</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the time at the center of the <computeroutput>erf</computeroutput> turn on </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Toff</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the time at the center of the <computeroutput>erf</computeroutput> turn off </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>DeltaT</parametername>
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-<para>is the spread of the turn on </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Fcorot</parametername>
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-<para>is fraction of the length relative to the corotation radius </para>
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-<parameteritem>
-<parameternamelist>
-<parametername>fixed</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>if nonzero, pattern speed is computed at every step from the current potential, if zero, pattern speed is evaluated once to start (default: false). </para>
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-<parameteritem>
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-<parametername>soft</parametername>
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-<para>use the shallow form of the potential (default: false) </para>
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-<parametername>ctr_name</parametername>
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-<para>defines the component that defines the bar center </para>
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-<parameteritem>
-<parameternamelist>
-<parametername>angm_name</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>defines the component that defines the L_z reservoir </para>
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-</parameterlist>
-</para>
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diff --git a/doxyxml/class_user_disk.xml b/doxyxml/class_user_disk.xml
deleted file mode 100644
index a8ef2f8..0000000
--- a/doxyxml/class_user_disk.xml
+++ /dev/null
@@ -1,740 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_user_disk" kind="class" language="C++" prot="public">
-    <compoundname>UserDisk</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_user_disk_8_h" local="no">UserDisk.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_user_disk_1ae367c2e1d52e5a756d503af4694a2cd2" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>UserDisk::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="36" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a86d2f8f9588c86703dd9e0f76aad6a7d" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* UserDisk::c0</definition>
-        <argsstring></argsstring>
-        <name>c0</name>
-        <qualifiedname>UserDisk::c0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="30" column="13" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a2b08b7b8f4f43f2002b7157b30916aa5" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string UserDisk::ctr_name</definition>
-        <argsstring></argsstring>
-        <name>ctr_name</name>
-        <qualifiedname>UserDisk::ctr_name</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="29" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a1f21df9dbc2ba9abcec63677ff5fa7bc" prot="private" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool UserDisk::debug</definition>
-        <argsstring></argsstring>
-        <name>debug</name>
-        <qualifiedname>UserDisk::debug</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="41" column="8" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a30d2cd50e573f0adb0422fe040ba4c9f" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::DeltaT</definition>
-        <argsstring></argsstring>
-        <name>DeltaT</name>
-        <qualifiedname>UserDisk::DeltaT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="36" column="26" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1adc0a030e7b37f1305788edf39693e825" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::dfac</definition>
-        <argsstring></argsstring>
-        <name>dfac</name>
-        <qualifiedname>UserDisk::dfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="39" column="33" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1ae7b2e1ead96b86fee097db1c2bbc3d47" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::dR</definition>
-        <argsstring></argsstring>
-        <name>dR</name>
-        <qualifiedname>UserDisk::dR</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="39" column="27" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a236636ef53367cb0549e4d5b04dabff7" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::dZ</definition>
-        <argsstring></argsstring>
-        <name>dZ</name>
-        <qualifiedname>UserDisk::dZ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="39" column="30" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1ae64cdc13c1c8c731383241023e0d8a23" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>UserDisk::mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="36" column="12" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
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-        <type>string</type>
-        <definition>string UserDisk::name</definition>
-        <argsstring></argsstring>
-        <name>name</name>
-        <qualifiedname>UserDisk::name</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="43" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="43" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int UserDisk::Ngrid</definition>
-        <argsstring></argsstring>
-        <name>Ngrid</name>
-        <qualifiedname>UserDisk::Ngrid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="40" column="7" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="40" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1afb7f30b9f8a87da557016f39c285a3f4" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int UserDisk::Nint</definition>
-        <argsstring></argsstring>
-        <name>Nint</name>
-        <qualifiedname>UserDisk::Nint</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="40" column="13" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="40" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a23eeae955e3bfe541eecfa15fde00b80" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::Nscale</definition>
-        <argsstring></argsstring>
-        <name>Nscale</name>
-        <qualifiedname>UserDisk::Nscale</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="39" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a383e99df5ecd19081245ad41f32e8897" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double * UserDisk::Ptable</definition>
-        <argsstring></argsstring>
-        <name>Ptable</name>
-        <qualifiedname>UserDisk::Ptable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="38" column="17" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1aeeb184e51e8a30998d7a0b655f89daf0" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::Rmax</definition>
-        <argsstring></argsstring>
-        <name>Rmax</name>
-        <qualifiedname>UserDisk::Rmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="39" column="17" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a5adc566f95cab204cde0c19f28aa5eb9" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double* UserDisk::Rtable</definition>
-        <argsstring></argsstring>
-        <name>Rtable</name>
-        <qualifiedname>UserDisk::Rtable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="38" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1ade27c11ef4c8439e118de657ba5b0d64" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::Toff</definition>
-        <argsstring></argsstring>
-        <name>Toff</name>
-        <qualifiedname>UserDisk::Toff</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="36" column="21" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a3c6ebde699b83211f3c0d8cd3f1508db" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::Ton</definition>
-        <argsstring></argsstring>
-        <name>Ton</name>
-        <qualifiedname>UserDisk::Ton</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="36" column="17" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="36" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a4d58eeb81601c834ed34b7e2e2bf1a06" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserDisk::Zmax</definition>
-        <argsstring></argsstring>
-        <name>Zmax</name>
-        <qualifiedname>UserDisk::Zmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="39" column="22" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_disk_1a0180476dd5083c5ffb2f0d017f9ffc9a" prot="private" static="no" mutable="no">
-        <type>double *</type>
-        <definition>double * UserDisk::Ztable</definition>
-        <argsstring></argsstring>
-        <name>Ztable</name>
-        <qualifiedname>UserDisk::Ztable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="38" column="24" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_user_disk_1a34fbb8ac17158fb9649ccd5eef0cacaa" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; UserDisk::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>UserDisk::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="53" column="25" bodyfile="/home/weinberg/Projects/EXP/src/user/UserDisk.H" bodystart="53" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void UserDisk::determine_acceleration_and_potential</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>UserDisk::determine_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_external_force_1a867ae9794c9b543385020b748b4a843c">determine_acceleration_and_potential</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Called to evaluate acceleration Default version calls the provided thread function. Can be overloaded to provide additional non-threaded tasks. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="32" column="8"/>
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-      <memberdef kind="function" id="class_user_disk_1a67f79bc4033b8bdeea46726e1a446eeb" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * UserDisk::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>UserDisk::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_external_force_1ae23fdc9cb99c6c1f8884b518659bfc5a">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="33" column="9"/>
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-      <memberdef kind="function" id="class_user_disk_1ada707baef87182904bfc3f0370836001" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserDisk::genTable</definition>
-        <argsstring>()</argsstring>
-        <name>genTable</name>
-        <qualifiedname>UserDisk::genTable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="45" column="8"/>
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-      <memberdef kind="function" id="class_user_disk_1aa4e10e8297c6d7943987c9167205422d" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserDisk::getTable</definition>
-        <argsstring>(double R, double Z, double &amp;pot, double &amp;fr, double &amp;fz)</argsstring>
-        <name>getTable</name>
-        <qualifiedname>UserDisk::getTable</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>Z</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>pot</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fr</declname>
-        </param>
-        <param>
-          <type>double &amp;</type>
-          <declname>fz</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="47" column="8"/>
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-      <memberdef kind="function" id="class_user_disk_1ad5993d440681f1ed11a0fa613eb6ff86" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void UserDisk::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>UserDisk::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="34" column="8"/>
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-        <type>void</type>
-        <definition>void UserDisk::printTable</definition>
-        <argsstring>()</argsstring>
-        <name>printTable</name>
-        <qualifiedname>UserDisk::printTable</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="46" column="8"/>
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-      <memberdef kind="function" id="class_user_disk_1af6b71bb33b10bf643cca4744189f6c98" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserDisk::userinfo</definition>
-        <argsstring>()</argsstring>
-        <name>userinfo</name>
-        <qualifiedname>UserDisk::userinfo</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserDisk.H" line="50" column="8"/>
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-    <sectiondef kind="public-func">
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-        <type></type>
-        <definition>UserDisk::UserDisk</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>UserDisk</name>
-        <qualifiedname>UserDisk::UserDisk</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type></type>
-        <definition>UserDisk::~UserDisk</definition>
-        <argsstring>()</argsstring>
-        <name>~UserDisk</name>
-        <qualifiedname>UserDisk::~UserDisk</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Potential and force of a thin exponential disk. The force is tabulated on a two-dimensional grid with positive Z and interpolated using bilinear interpolation.</para>
-<para>The default values for Nscale, Ngrid and Nint should suffice for most applications.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>a</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the disk scale length </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mass</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the total mass of the disk </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Ton</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the time at the center of the <computeroutput>erf</computeroutput> turn on </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Toff</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the time at the center of the <computeroutput>erf</computeroutput> turn off </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>DeltaT</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the spread of the turn on </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ctrname</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>defines the component that defines the center (otherwise the center is fixed to the origin) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Nscale</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the physical scale of the grid in numbers of disk scale lengths </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Ngrid</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of table points in each dimension </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Nint</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the number of integration knots </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
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-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
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-      <node id="1">
-        <label>UserDisk</label>
-        <link refid="class_user_disk"/>
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-        <label>Component</label>
-        <link refid="class_component"/>
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-          <edgelabel>c0</edgelabel>
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-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
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-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
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-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
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-        <label>EL3</label>
-        <link refid="class_e_l3"/>
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-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
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-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
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-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
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-      <node id="1">
-        <label>UserDisk</label>
-        <link refid="class_user_disk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
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-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
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-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>UserDisk</scope><name>atol</name></member>
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-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>UserDisk</scope><name>ClearExternal</name></member>
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-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>UserDisk</scope><name>compute</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>UserDisk</scope><name>conf</name></member>
-      <member refid="class_user_disk_1a2b08b7b8f4f43f2002b7157b30916aa5" prot="private" virt="non-virtual"><scope>UserDisk</scope><name>ctr_name</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>UserDisk</scope><name>cube</name></member>
-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>UserDisk</scope><name>cuda_aware</name></member>
-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>UserDisk</scope><name>cudaAware</name></member>
-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>UserDisk</scope><name>current_keys</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>UserDisk</scope><name>cylinder</name></member>
-      <member refid="class_user_disk_1a1f21df9dbc2ba9abcec63677ff5fa7bc" prot="private" virt="non-virtual"><scope>UserDisk</scope><name>debug</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_user_halo.xml b/doxyxml/class_user_halo.xml
deleted file mode 100644
index 3235619..0000000
--- a/doxyxml/class_user_halo.xml
+++ /dev/null
@@ -1,581 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_user_halo" kind="class" language="C++" prot="public">
-    <compoundname>UserHalo</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_user_halo_8_h" local="no">UserHalo.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_user_halo_1a2c13446e9f8f8580d7dd34b9c2ae6b2e" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* UserHalo::c0</definition>
-        <argsstring></argsstring>
-        <name>c0</name>
-        <qualifiedname>UserHalo::c0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="32" column="13" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_halo_1a2fb7f2cdd0c12bc712ebf3562eefa58e" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string UserHalo::comp_name</definition>
-        <argsstring></argsstring>
-        <name>comp_name</name>
-        <qualifiedname>UserHalo::comp_name</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="26" column="26" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="26" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_halo_1a15a84545f1a27eb5d5d6cdfe81478378" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int UserHalo::diverge</definition>
-        <argsstring></argsstring>
-        <name>diverge</name>
-        <qualifiedname>UserHalo::diverge</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="29" column="7" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_halo_1a9d4c5308412662f1da49b8988552fbc2" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserHalo::diverge_rfac</definition>
-        <argsstring></argsstring>
-        <name>diverge_rfac</name>
-        <qualifiedname>UserHalo::diverge_rfac</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="28" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_halo_1ab608b1b0fee5ca1f04902e1cba69807a" prot="private" static="no" mutable="no">
-        <type><ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref> *</type>
-        <definition>SphericalModelTable* UserHalo::model</definition>
-        <argsstring></argsstring>
-        <name>model</name>
-        <qualifiedname>UserHalo::model</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="31" column="23" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_halo_1a44129789938172e30a0eef33a01a1bac" prot="private" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string UserHalo::model_file</definition>
-        <argsstring></argsstring>
-        <name>model_file</name>
-        <qualifiedname>UserHalo::model_file</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="26" column="15" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="26" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_halo_1a06e03b5050461dfa50a1eaa42c6eddeb" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserHalo::q1</definition>
-        <argsstring></argsstring>
-        <name>q1</name>
-        <qualifiedname>UserHalo::q1</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="27" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_halo_1aeec803370a5e53de2ef410672b1864b6" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserHalo::q2</definition>
-        <argsstring></argsstring>
-        <name>q2</name>
-        <qualifiedname>UserHalo::q2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="27" column="13" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_halo_1aba03f022faf848414746e1f733d0b060" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserHalo::q3</definition>
-        <argsstring></argsstring>
-        <name>q3</name>
-        <qualifiedname>UserHalo::q3</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="27" column="16" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_user_halo_1a55cb95abea8755fa0f671b1e8c17f5b6" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; UserHalo::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>UserHalo::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="37" column="25" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="37" bodyend="-1"/>
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-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_user_halo_1a00cd6356aaf074d5d95833ef38c0b009" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void UserHalo::determine_acceleration_and_potential</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>UserHalo::determine_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_external_force_1a867ae9794c9b543385020b748b4a843c">determine_acceleration_and_potential</reimplements>
-        <param>
-          <type>void</type>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Called to evaluate acceleration Default version calls the provided thread function. Can be overloaded to provide additional non-threaded tasks. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="22" column="8"/>
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-      <memberdef kind="function" id="class_user_halo_1aebfb1fc004e1edca783070360bbbf89d" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * UserHalo::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>UserHalo::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_external_force_1ae23fdc9cb99c6c1f8884b518659bfc5a">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="23" column="9"/>
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-      <memberdef kind="function" id="class_user_halo_1aeca44db704f6e0da1632ed20dabca7c0" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void UserHalo::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>UserHalo::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="24" column="8"/>
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-      <memberdef kind="function" id="class_user_halo_1aa9aab4269f2589b8802e87e099fd18df" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserHalo::userinfo</definition>
-        <argsstring>()</argsstring>
-        <name>userinfo</name>
-        <qualifiedname>UserHalo::userinfo</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="34" column="8"/>
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-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_user_halo_1a133d375decea3f58c485eee510540d2e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>UserHalo::UserHalo</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>UserHalo</name>
-        <qualifiedname>UserHalo::UserHalo</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="42" column="3"/>
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-      <memberdef kind="function" id="class_user_halo_1a8b4d02b60b3ee3ebae82fd3906464e39" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>UserHalo::~UserHalo</definition>
-        <argsstring>()</argsstring>
-        <name>~UserHalo</name>
-        <qualifiedname>UserHalo::~UserHalo</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="45" column="3"/>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Halo model based on <ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref></para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>model_file</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the filename </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>comp_name</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the component to apply this (blank for all, default=&quot;&quot;) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>diverge</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>set to 1 uses a power law inner profile </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>diverge_rfac</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the value of power law exponent </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>q0</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the x-axis scaling (for simulating a triaxial halo, default: 1) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>q1</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the y-axis scaling (for simulating a triaxial halo, default: 1) </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>q2</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the z-axis scaling (for simulating a triaxial halo, default: 1) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
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-    <inheritancegraph>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
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-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
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-      <node id="1">
-        <label>UserHalo</label>
-        <link refid="class_user_halo"/>
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-      <node id="15">
-        <label>ANGLE_GRID</label>
-        <link refid="struct_a_n_g_l_e___g_r_i_d"/>
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-      <node id="10">
-        <label>AxiSymModel</label>
-        <link refid="class_axi_sym_model"/>
-        <childnode refid="11" relation="public-inheritance">
-        </childnode>
-        <childnode refid="12" relation="public-inheritance">
-        </childnode>
-        <childnode refid="13" relation="usage">
-          <edgelabel>gen_orb</edgelabel>
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-      <node id="20">
-        <label>Cheby1d</label>
-        <link refid="class_cheby1d"/>
-        <childnode refid="21" relation="public-inheritance">
-        </childnode>
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-      <node id="5">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
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-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
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-      <node id="18">
-        <label>FDIST</label>
-        <link refid="class_f_d_i_s_t"/>
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-      <node id="19">
-        <label>FDISTC</label>
-        <link refid="class_f_d_i_s_t_c"/>
-        <childnode refid="20" relation="usage">
-          <edgelabel>FF</edgelabel>
-          <edgelabel>GG</edgelabel>
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-      </node>
-      <node id="16">
-        <label>GaussQuad</label>
-        <link refid="class_gauss_quad"/>
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-      <node id="21">
-        <label>Interp1d</label>
-        <link refid="class_interp1d"/>
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-      <node id="11">
-        <label>MassModel</label>
-        <link refid="class_mass_model"/>
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-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
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-      <node id="17">
-        <label>RUN</label>
-        <link refid="class_r_u_n"/>
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-      <node id="14">
-        <label>RegularOrbit</label>
-        <link refid="class_regular_orbit"/>
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-      <node id="9">
-        <label>SphericalModelTable</label>
-        <link refid="class_spherical_model_table"/>
-        <childnode refid="10" relation="public-inheritance">
-        </childnode>
-        <childnode refid="17" relation="usage">
-          <edgelabel>density</edgelabel>
-          <edgelabel>mass</edgelabel>
-          <edgelabel>pot</edgelabel>
-        </childnode>
-        <childnode refid="18" relation="usage">
-          <edgelabel>df</edgelabel>
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-        <childnode refid="19" relation="usage">
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-      <node id="13">
-        <label>SphericalOrbit</label>
-        <link refid="class_spherical_orbit"/>
-        <childnode refid="14" relation="public-inheritance">
-        </childnode>
-        <childnode refid="15" relation="usage">
-          <edgelabel>angle_grid</edgelabel>
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-        <childnode refid="16" relation="usage">
-          <edgelabel>Gkn</edgelabel>
-        </childnode>
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-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
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-      <node id="1">
-        <label>UserHalo</label>
-        <link refid="class_user_halo"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="9" relation="usage">
-          <edgelabel>model</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-      </node>
-      <node id="12">
-        <label>std::enable_shared_from_this&lt; AxiSymModel &gt;</label>
-      </node>
-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/user/UserHalo.H" line="18" column="1" bodyfile="/home/weinberg/Projects/EXP/src/user/UserHalo.H" bodystart="19" bodyend="47"/>
-    <listofallmembers>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>atol</name></member>
-      <member refid="class_user_halo_1a2c13446e9f8f8580d7dd34b9c2ae6b2e" prot="private" virt="non-virtual"><scope>UserHalo</scope><name>c0</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>UserHalo</scope><name>cC</name></member>
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-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>ClearExternal</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>UserHalo</scope><name>coef_dump</name></member>
-      <member refid="class_user_halo_1a2fb7f2cdd0c12bc712ebf3562eefa58e" prot="private" virt="non-virtual"><scope>UserHalo</scope><name>comp_name</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>UserHalo</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>compute</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>UserHalo</scope><name>conf</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>cube</name></member>
-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>UserHalo</scope><name>cuda_aware</name></member>
-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>cudaAware</name></member>
-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>UserHalo</scope><name>current_keys</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>cylinder</name></member>
-      <member refid="class_user_halo_1a00cd6356aaf074d5d95833ef38c0b009" prot="private" virt="virtual"><scope>UserHalo</scope><name>determine_acceleration_and_potential</name></member>
-      <member refid="class_user_halo_1aebfb1fc004e1edca783070360bbbf89d" prot="private" virt="virtual"><scope>UserHalo</scope><name>determine_acceleration_and_potential_thread</name></member>
-      <member refid="class_external_force_1a289f6465cc44b742f7b202c9827ea0d9" prot="private" virt="virtual"><scope>UserHalo</scope><name>determine_coefficients</name></member>
-      <member refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724" prot="public" virt="virtual" ambiguityscope="PotAccel::"><scope>UserHalo</scope><name>determine_coefficients</name></member>
-      <member refid="class_external_force_1ad7749fd6dc7d2a6090342719d517e029" prot="private" virt="virtual"><scope>UserHalo</scope><name>determine_coefficients_thread</name></member>
-      <member refid="class_user_halo_1a15a84545f1a27eb5d5d6cdfe81478378" prot="private" virt="non-virtual"><scope>UserHalo</scope><name>diverge</name></member>
-      <member refid="class_user_halo_1a9d4c5308412662f1da49b8988552fbc2" prot="private" virt="non-virtual"><scope>UserHalo</scope><name>diverge_rfac</name></member>
-      <member refid="class_pot_accel_1a6a9ec23d29b553c1625bd8e88fe7692d" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>dof</name></member>
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-      <member refid="class_external_force_1a3ab7afbf87f6bbc2338ef6f61265b16f" prot="public" virt="virtual"><scope>UserHalo</scope><name>finish</name></member>
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-      <member refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>PotAccel</name></member>
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-      <member refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" prot="protected" virt="non-virtual"><scope>UserHalo</scope><name>scale</name></member>
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-      <member refid="class_user_halo_1a133d375decea3f58c485eee510540d2e" prot="public" virt="non-virtual"><scope>UserHalo</scope><name>UserHalo</name></member>
-      <member refid="class_user_halo_1aa9aab4269f2589b8802e87e099fd18df" prot="private" virt="non-virtual"><scope>UserHalo</scope><name>userinfo</name></member>
-      <member refid="class_user_halo_1a55cb95abea8755fa0f671b1e8c17f5b6" prot="private" virt="non-virtual"><scope>UserHalo</scope><name>valid_keys</name></member>
-      <member refid="class_external_force_1a18d27a313558c1ca3a536121571fe9ec" prot="public" virt="virtual"><scope>UserHalo</scope><name>~ExternalForce</name></member>
-      <member refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" prot="public" virt="virtual"><scope>UserHalo</scope><name>~PotAccel</name></member>
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-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_user_log_pot.xml b/doxyxml/class_user_log_pot.xml
deleted file mode 100644
index 21ed535..0000000
--- a/doxyxml/class_user_log_pot.xml
+++ /dev/null
@@ -1,391 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_user_log_pot" kind="class" language="C++" prot="public">
-    <compoundname>UserLogPot</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_user_log_pot_8_h" local="no">UserLogPot.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_user_log_pot_1a745ce3d6d45d2541bd5d1b209c988c0d" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserLogPot::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>UserLogPot::b</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="23" column="12" bodyfile="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_log_pot_1a818c4c5206b30182cafdb17b5183e416" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserLogPot::c</definition>
-        <argsstring></argsstring>
-        <name>c</name>
-        <qualifiedname>UserLogPot::c</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="23" column="14" bodyfile="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_log_pot_1a1a174b6e73d117ba7e7e7b9f7a6e583d" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserLogPot::R</definition>
-        <argsstring></argsstring>
-        <name>R</name>
-        <qualifiedname>UserLogPot::R</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="23" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_log_pot_1ae3a67b38ab1d59f1451f6bd9b22f0fd6" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserLogPot::v2</definition>
-        <argsstring></argsstring>
-        <name>v2</name>
-        <qualifiedname>UserLogPot::v2</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="23" column="16" bodyfile="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-static-attrib">
-      <memberdef kind="variable" id="class_user_log_pot_1ac8433b910b12f970d97c906467c2e5c4" prot="private" static="yes" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; UserLogPot::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>UserLogPot::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="28" column="25" bodyfile="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="private-func">
-      <memberdef kind="function" id="class_user_log_pot_1ad7133702147a1aa09c6cca20fc3571fa" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void UserLogPot::determine_acceleration_and_potential</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>UserLogPot::determine_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_external_force_1a867ae9794c9b543385020b748b4a843c">determine_acceleration_and_potential</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Called to evaluate acceleration Default version calls the provided thread function. Can be overloaded to provide additional non-threaded tasks. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="19" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_user_log_pot_1aaf3f6c95cc70aafac9e48c80699cc345" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void *</type>
-        <definition>void * UserLogPot::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>UserLogPot::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_external_force_1ae23fdc9cb99c6c1f8884b518659bfc5a">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="20" column="9"/>
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-        <type>void</type>
-        <definition>void UserLogPot::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>UserLogPot::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="21" column="8"/>
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-        <type>void</type>
-        <definition>void UserLogPot::userinfo</definition>
-        <argsstring>()</argsstring>
-        <name>userinfo</name>
-        <qualifiedname>UserLogPot::userinfo</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="25" column="8"/>
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-        <type></type>
-        <definition>UserLogPot::UserLogPot</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>UserLogPot</name>
-        <qualifiedname>UserLogPot::UserLogPot</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="33" column="3"/>
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-        <type></type>
-        <definition>UserLogPot::~UserLogPot</definition>
-        <argsstring>()</argsstring>
-        <name>~UserLogPot</name>
-        <qualifiedname>UserLogPot::~UserLogPot</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="36" column="3"/>
-      </memberdef>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para><ref refid="class_logarithmic" kindref="compound">Logarithmic</ref> triaxial potential</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>R</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the core size </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>b</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the y-axis scale factor </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>c</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the z-axis scale factor </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>v2</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the amplitude (e.g. the velocity on the axis at x=1) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="1">
-        <label>UserLogPot</label>
-        <link refid="class_user_log_pot"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
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-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
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-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
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-      <node id="1">
-        <label>UserLogPot</label>
-        <link refid="class_user_log_pot"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
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-    <location file="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" line="15" column="1" bodyfile="/home/weinberg/Projects/EXP/src/user/UserLogPot.H" bodystart="16" bodyend="38"/>
-    <listofallmembers>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>UserLogPot</scope><name>atol</name></member>
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-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>UserLogPot</scope><name>coef_dump</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>UserLogPot</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>UserLogPot</scope><name>compute</name></member>
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diff --git a/doxyxml/class_user_m_ndisk.xml b/doxyxml/class_user_m_ndisk.xml
deleted file mode 100644
index eac0ef8..0000000
--- a/doxyxml/class_user_m_ndisk.xml
+++ /dev/null
@@ -1,493 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_user_m_ndisk" kind="class" language="C++" prot="public">
-    <compoundname>UserMNdisk</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_user_m_ndisk_8_h" local="no">UserMNdisk.H</includes>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="class_user_m_ndisk_1a7eb2fb4323db9a19741272226841ae1e" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserMNdisk::a</definition>
-        <argsstring></argsstring>
-        <name>a</name>
-        <qualifiedname>UserMNdisk::a</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="29" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="29" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_user_m_ndisk_1aadf21d1d89a9e694558f9396130917c5" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserMNdisk::b</definition>
-        <argsstring></argsstring>
-        <name>b</name>
-        <qualifiedname>UserMNdisk::b</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="29" column="12" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_m_ndisk_1a602d572668a029bcd9d74b6cf3e5c0f1" prot="private" static="no" mutable="no">
-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* UserMNdisk::c0</definition>
-        <argsstring></argsstring>
-        <name>c0</name>
-        <qualifiedname>UserMNdisk::c0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="23" column="13" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_m_ndisk_1ad7f01580697cf594007641f031784e57" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string UserMNdisk::ctr_name</definition>
-        <argsstring></argsstring>
-        <name>ctr_name</name>
-        <qualifiedname>UserMNdisk::ctr_name</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_m_ndisk_1ac5b96ba94e9ac2224e49755be6e23461" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserMNdisk::DeltaT</definition>
-        <argsstring></argsstring>
-        <name>DeltaT</name>
-        <qualifiedname>UserMNdisk::DeltaT</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="29" column="28" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_m_ndisk_1a307c9f5511b762b3c9a1305b2839d6df" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserMNdisk::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>UserMNdisk::mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="29" column="14" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="29" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_user_m_ndisk_1a3916fc83fdcbc93fa387c4e3596eecf8" prot="private" static="no" mutable="no">
-        <type>string</type>
-        <definition>string UserMNdisk::name</definition>
-        <argsstring></argsstring>
-        <name>name</name>
-        <qualifiedname>UserMNdisk::name</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="31" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_m_ndisk_1affd510bd3161fc2d283929c77467ae7d" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserMNdisk::Toff</definition>
-        <argsstring></argsstring>
-        <name>Toff</name>
-        <qualifiedname>UserMNdisk::Toff</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="29" column="23" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="class_user_m_ndisk_1a6a668a036d4c647a248f4f918ddb3c51" prot="private" static="no" mutable="no">
-        <type>double</type>
-        <definition>double UserMNdisk::Ton</definition>
-        <argsstring></argsstring>
-        <name>Ton</name>
-        <qualifiedname>UserMNdisk::Ton</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="29" column="19" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="29" bodyend="-1"/>
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-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; UserMNdisk::valid_keys</definition>
-        <argsstring></argsstring>
-        <name>valid_keys</name>
-        <qualifiedname>UserMNdisk::valid_keys</qualifiedname>
-        <briefdescription>
-<para>Valid keys for YAML configurations. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="36" column="25" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="36" bodyend="-1"/>
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-        <type>void</type>
-        <definition>void UserMNdisk::determine_acceleration_and_potential</definition>
-        <argsstring>(void)</argsstring>
-        <name>determine_acceleration_and_potential</name>
-        <qualifiedname>UserMNdisk::determine_acceleration_and_potential</qualifiedname>
-        <reimplements refid="class_external_force_1a867ae9794c9b543385020b748b4a843c">determine_acceleration_and_potential</reimplements>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Called to evaluate acceleration Default version calls the provided thread function. Can be overloaded to provide additional non-threaded tasks. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="25" column="8"/>
-      </memberdef>
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-        <type>void *</type>
-        <definition>void * UserMNdisk::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>UserMNdisk::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_external_force_1ae23fdc9cb99c6c1f8884b518659bfc5a">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="26" column="9"/>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_ndisk_1aa6c0f735394c00044c7ac62f4396287f" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void UserMNdisk::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>UserMNdisk::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="27" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_ndisk_1a27dbe34527e153e0cd9fe195f908b20b" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserMNdisk::userinfo</definition>
-        <argsstring>()</argsstring>
-        <name>userinfo</name>
-        <qualifiedname>UserMNdisk::userinfo</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="33" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_user_m_ndisk_1aa4d9412500d874b0cf14193af8789ed2" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>UserMNdisk::UserMNdisk</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>UserMNdisk</name>
-        <qualifiedname>UserMNdisk::UserMNdisk</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="41" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_ndisk_1a9511ef460f70bf974b41d627f2b0e3a9" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>UserMNdisk::~UserMNdisk</definition>
-        <argsstring>()</argsstring>
-        <name>~UserMNdisk</name>
-        <qualifiedname>UserMNdisk::~UserMNdisk</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="44" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Potential and force of the Miyamoto-Nagai disk.</para>
-<para><parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>a</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the disk scale length parameter </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>b</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the disk scale height parameter </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>mass</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the total mass of the disk </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Ton</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the time at the center of the <computeroutput>erf</computeroutput> turn on </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Toff</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the time at the center of the <computeroutput>erf</computeroutput> turn off </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>DeltaT</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the spread of the turn on </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ctrname</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>defines the component that defines the center (otherwise the center is fixed to the origin) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="1">
-        <label>UserMNdisk</label>
-        <link refid="class_user_m_ndisk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="5">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="1">
-        <label>UserMNdisk</label>
-        <link refid="class_user_m_ndisk"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-      </node>
-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" line="18" column="1" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMNdisk.H" bodystart="19" bodyend="46"/>
-    <listofallmembers>
-      <member refid="class_user_m_ndisk_1a7eb2fb4323db9a19741272226841ae1e" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>a</name></member>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>atol</name></member>
-      <member refid="class_user_m_ndisk_1aadf21d1d89a9e694558f9396130917c5" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>b</name></member>
-      <member refid="class_user_m_ndisk_1a602d572668a029bcd9d74b6cf3e5c0f1" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>c0</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>cC</name></member>
-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>cc_lock</name></member>
-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>ClearExternal</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>coef_dump</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>compute</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>conf</name></member>
-      <member refid="class_user_m_ndisk_1ad7f01580697cf594007641f031784e57" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>ctr_name</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>cube</name></member>
-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>cuda_aware</name></member>
-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>cudaAware</name></member>
-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>current_keys</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>cylinder</name></member>
-      <member refid="class_user_m_ndisk_1ac5b96ba94e9ac2224e49755be6e23461" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>DeltaT</name></member>
-      <member refid="class_user_m_ndisk_1aa9c8ae0899ca88f62abf4e370a337e54" prot="private" virt="virtual"><scope>UserMNdisk</scope><name>determine_acceleration_and_potential</name></member>
-      <member refid="class_user_m_ndisk_1ab6ddfc877fa2f0c71e30b64c3adf2e55" prot="private" virt="virtual"><scope>UserMNdisk</scope><name>determine_acceleration_and_potential_thread</name></member>
-      <member refid="class_external_force_1a289f6465cc44b742f7b202c9827ea0d9" prot="private" virt="virtual"><scope>UserMNdisk</scope><name>determine_coefficients</name></member>
-      <member refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724" prot="public" virt="virtual" ambiguityscope="PotAccel::"><scope>UserMNdisk</scope><name>determine_coefficients</name></member>
-      <member refid="class_external_force_1ad7749fd6dc7d2a6090342719d517e029" prot="private" virt="virtual"><scope>UserMNdisk</scope><name>determine_coefficients_thread</name></member>
-      <member refid="class_pot_accel_1a6a9ec23d29b553c1625bd8e88fe7692d" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>dof</name></member>
-      <member refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>dump_coefs</name></member>
-      <member refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>dump_coefs_h5</name></member>
-      <member refid="class_pot_accel_1abee9651463af53460b622250d311329e" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>exp_thread_fork</name></member>
-      <member refid="class_external_force_1a05aa158b28c4bb8665bb07f23a98e234" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>ExternalForce</name></member>
-      <member refid="class_external_force_1a3ab7afbf87f6bbc2338ef6f61265b16f" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>finish</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fd" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>Geometry</name></member>
-      <member refid="class_pot_accel_1adb6ef0bdae7d3520ca1f9fd8a6d648ea" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>geometry</name></member>
-      <member refid="class_pot_accel_1ade38f6ecdf80f80cde847d463b14909b" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>geoname</name></member>
-      <member refid="class_external_force_1a0d4186a622ace64c9881fd231cf165c6" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>get_acceleration_and_potential</name></member>
-      <member refid="class_pot_accel_1a0998c361bca277b3bba95f59acaba203" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>getScale</name></member>
-      <member refid="class_pot_accel_1a4a812594dff363f07bf57d69a60e4a13" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>HaveCoefDump</name></member>
-      <member refid="class_external_force_1a19f77a4862205b82b4e3bb126880ad6e" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>id</name></member>
-      <member refid="class_user_m_ndisk_1aa6c0f735394c00044c7ac62f4396287f" prot="private" virt="virtual"><scope>UserMNdisk</scope><name>initialize</name></member>
-      <member refid="class_pot_accel_1a706b04f03c8beb4369dd125406770116" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>kill_mutex</name></member>
-      <member refid="class_pot_accel_1a65fa890eea987e18d552825ab074939b" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>make_mutex</name></member>
-      <member refid="class_user_m_ndisk_1a307c9f5511b762b3c9a1305b2839d6df" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>mass</name></member>
-      <member refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>mlevel</name></member>
-      <member refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>multistep_debug</name></member>
-      <member refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>multistep_reset</name></member>
-      <member refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>multistep_update</name></member>
-      <member refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>multistep_update_begin</name></member>
-      <member refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>multistep_update_finish</name></member>
-      <member refid="class_user_m_ndisk_1a3916fc83fdcbc93fa387c4e3596eecf8" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>name</name></member>
-      <member refid="class_pot_accel_1a73976f361ed7abf13001835bfcdee639" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>nbodies</name></member>
-      <member refid="class_pot_accel_1a4f2099b1b705731b909e63c90ea59f04" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>NoCoefs</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda7c49f38007dad33fb1e48fdebdd2f8c1" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>other</name></member>
-      <member refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>play_back</name></member>
-      <member refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>play_cnew</name></member>
-      <member refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>PotAccel</name></member>
-      <member refid="class_external_force_1a67ec1347079ac96a23e4b850857c5a53" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>print_divider</name></member>
-      <member refid="class_pot_accel_1a5e257d38dbf5c3d9630906a96abf6915" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a37a3c348c0febbf70ff94949071c3beb" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>RegisterComponent</name></member>
-      <member refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>scale</name></member>
-      <member refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>set_multistep_level</name></member>
-      <member refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>SetExternal</name></member>
-      <member refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>setScale</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda0a1acd8c0d6e745fb0ae3e33e458a9b8" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>slab</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda996ce4577548b6da6b1330a78b1c6f6a" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>sphere</name></member>
-      <member refid="class_pot_accel_1aff158a74d7328a080ed619c1456836f5" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>t</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda1792d3c00a41ee78957c83611fd368a2" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>table</name></member>
-      <member refid="class_pot_accel_1a125d7343a34d292a3e4a48a5d984cac4" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>td</name></member>
-      <member refid="class_pot_accel_1a86d0d012a44e2eb7c3e385d852a5fdde" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>thread_timing_beg</name></member>
-      <member refid="class_pot_accel_1a76c805cd8d0d134d37929eeb48115b33" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>thread_timing_end</name></member>
-      <member refid="class_pot_accel_1a4315e73a641c54eefc548b7d14cb06b6" prot="protected" virt="non-virtual"><scope>UserMNdisk</scope><name>timer_list</name></member>
-      <member refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>TList</name></member>
-      <member refid="class_user_m_ndisk_1affd510bd3161fc2d283929c77467ae7d" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>Toff</name></member>
-      <member refid="class_user_m_ndisk_1a6a668a036d4c647a248f4f918ddb3c51" prot="private" virt="non-virtual"><scope>UserMNdisk</scope><name>Ton</name></member>
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-      <member refid="class_pot_accel_1acd32c6464b705469911df718114187b9" prot="public" virt="non-virtual"><scope>UserMNdisk</scope><name>use</name></member>
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-      <member refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" prot="public" virt="virtual"><scope>UserMNdisk</scope><name>~PotAccel</name></member>
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-</doxygen>
diff --git a/doxyxml/class_user_m_w.xml b/doxyxml/class_user_m_w.xml
deleted file mode 100644
index 07a0106..0000000
--- a/doxyxml/class_user_m_w.xml
+++ /dev/null
@@ -1,924 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <compoundname>UserMW</compoundname>
-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
-    <includes refid="_user_m_w_8_h" local="no">UserMW.H</includes>
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-        <type>double</type>
-        <definition>double UserMW::a_disk</definition>
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-        <name>a_disk</name>
-        <qualifiedname>UserMW::a_disk</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="44" column="34" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="44" bodyend="-1"/>
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-        <definition>double UserMW::b_disk</definition>
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-        <name>b_disk</name>
-        <qualifiedname>UserMW::b_disk</qualifiedname>
-        <briefdescription>
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-        <type><ref refid="class_component" kindref="compound">Component</ref> *</type>
-        <definition>Component* UserMW::c0</definition>
-        <argsstring></argsstring>
-        <name>c0</name>
-        <qualifiedname>UserMW::c0</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <type>double</type>
-        <definition>double UserMW::c_bulge</definition>
-        <argsstring></argsstring>
-        <name>c_bulge</name>
-        <qualifiedname>UserMW::c_bulge</qualifiedname>
-        <briefdescription>
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-          <declname>ay3</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>az3</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="102" column="8" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="102" bodyend="113"/>
-        <references refid="class_user_m_w_1a84c7750a14b813de910078a07df062cd" compoundref="_user_m_w_8_h" startline="44">c_bulge</references>
-        <references refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" compoundref="_user_m_w_8_h" startline="44">G</references>
-        <references refid="class_user_m_w_1a6bddeab196fbedc8e0d354c7be951578" compoundref="_user_m_w_8_h" startline="44">M_bulge</references>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a692911e9ad271ab4f219556795f20ad0" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double UserMW::HN_bulge_pot</definition>
-        <argsstring>(double r)</argsstring>
-        <name>HN_bulge_pot</name>
-        <qualifiedname>UserMW::HN_bulge_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="95" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="95" bodyend="100"/>
-        <references refid="class_user_m_w_1a84c7750a14b813de910078a07df062cd" compoundref="_user_m_w_8_h" startline="44">c_bulge</references>
-        <references refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" compoundref="_user_m_w_8_h" startline="44">G</references>
-        <references refid="class_user_m_w_1a6bddeab196fbedc8e0d354c7be951578" compoundref="_user_m_w_8_h" startline="44">M_bulge</references>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a781cdecf7cc74dc56dd4ac16adc1b0e0" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserMW::HN_nucl_dphi_dr</definition>
-        <argsstring>(double x, double y, double z, double *ax2, double *ay2, double *az2)</argsstring>
-        <name>HN_nucl_dphi_dr</name>
-        <qualifiedname>UserMW::HN_nucl_dphi_dr</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>ax2</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>ay2</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>az2</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="82" column="8" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="82" bodyend="93"/>
-        <references refid="class_user_m_w_1a2373ba2452bada9ce59d611d0263457c" compoundref="_user_m_w_8_h" startline="44">c_nucl</references>
-        <references refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" compoundref="_user_m_w_8_h" startline="44">G</references>
-        <references refid="class_user_m_w_1a049aae30a64fbef142e9600d1ebbc523" compoundref="_user_m_w_8_h" startline="44">M_nucl</references>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1ad968f87cbbf91d8e4ceb209a39142915" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double UserMW::HN_nucl_pot</definition>
-        <argsstring>(double r)</argsstring>
-        <name>HN_nucl_pot</name>
-        <qualifiedname>UserMW::HN_nucl_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="75" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="75" bodyend="80"/>
-        <references refid="class_user_m_w_1a2373ba2452bada9ce59d611d0263457c" compoundref="_user_m_w_8_h" startline="44">c_nucl</references>
-        <references refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" compoundref="_user_m_w_8_h" startline="44">G</references>
-        <references refid="class_user_m_w_1a049aae30a64fbef142e9600d1ebbc523" compoundref="_user_m_w_8_h" startline="44">M_nucl</references>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a40939e74cec9a7afbf18620cd3142c16" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void UserMW::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>UserMW::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="40" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a65318392e5520910d7e1eeffd935dffd" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserMW::MN_dphi_dR_dz</definition>
-        <argsstring>(double x, double y, double z, double *ax4, double *ay4, double *az4)</argsstring>
-        <name>MN_dphi_dR_dz</name>
-        <qualifiedname>UserMW::MN_dphi_dR_dz</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>ax4</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>ay4</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>az4</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="122" column="7" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="122" bodyend="143"/>
-        <references refid="class_user_m_w_1a149bb4855e73f1d1fa6bf82b2c0783b5" compoundref="_user_m_w_8_h" startline="44">a_disk</references>
-        <references refid="class_user_m_w_1a098831e44a5fcb6fadeeb7b42c712bf1" compoundref="_user_m_w_8_h" startline="44">b_disk</references>
-        <references refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" compoundref="_user_m_w_8_h" startline="44">G</references>
-        <references refid="class_user_m_w_1ac38fa72377dac48905e2e42c845a2878" compoundref="_user_m_w_8_h" startline="44">M_disk</references>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a5feb563cf62a634ff2af27f5d00bf164" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double UserMW::MN_pot</definition>
-        <argsstring>(double z, double R)</argsstring>
-        <name>MN_pot</name>
-        <qualifiedname>UserMW::MN_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>R</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="115" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="115" bodyend="120"/>
-        <references refid="class_user_m_w_1a149bb4855e73f1d1fa6bf82b2c0783b5" compoundref="_user_m_w_8_h" startline="44">a_disk</references>
-        <references refid="class_user_m_w_1a098831e44a5fcb6fadeeb7b42c712bf1" compoundref="_user_m_w_8_h" startline="44">b_disk</references>
-        <references refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" compoundref="_user_m_w_8_h" startline="44">G</references>
-        <references refid="class_user_m_w_1ac38fa72377dac48905e2e42c845a2878" compoundref="_user_m_w_8_h" startline="44">M_disk</references>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a21b8cf720840233747ed2297e1d847d7" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserMW::NFW_dphi_dr</definition>
-        <argsstring>(double x, double y, double z, double *ax1, double *ay1, double *az1)</argsstring>
-        <name>NFW_dphi_dr</name>
-        <qualifiedname>UserMW::NFW_dphi_dr</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>y</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>z</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>ax1</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>ay1</declname>
-        </param>
-        <param>
-          <type>double *</type>
-          <declname>az1</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="62" column="8" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="62" bodyend="73"/>
-        <references refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" compoundref="_user_m_w_8_h" startline="44">G</references>
-        <references refid="class_user_m_w_1ae70b1a586a8944151e85c9a7b721810a" compoundref="_user_m_w_8_h" startline="44">M_halo</references>
-        <references refid="class_user_m_w_1ad8cc11c009761b27c4ae9ecd453272d3" compoundref="_user_m_w_8_h" startline="44">rs_halo</references>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a17302063b0765bb624390951579c152a" prot="private" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type>double</type>
-        <definition>double UserMW::NFW_pot</definition>
-        <argsstring>(double r)</argsstring>
-        <name>NFW_pot</name>
-        <qualifiedname>UserMW::NFW_pot</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>r</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="55" column="10" bodyfile="/home/weinberg/Projects/EXP/src/user/UserMW.H" bodystart="55" bodyend="60"/>
-        <references refid="class_user_m_w_1a70f93583ba04717b4780366453fa0260" compoundref="_user_m_w_8_h" startline="44">G</references>
-        <references refid="class_user_m_w_1ae70b1a586a8944151e85c9a7b721810a" compoundref="_user_m_w_8_h" startline="44">M_halo</references>
-        <references refid="class_user_m_w_1ad8cc11c009761b27c4ae9ecd453272d3" compoundref="_user_m_w_8_h" startline="44">rs_halo</references>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a3188683c655b8693f9a4a2a6df58e354" prot="private" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void UserMW::userinfo</definition>
-        <argsstring>()</argsstring>
-        <name>userinfo</name>
-        <qualifiedname>UserMW::userinfo</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="51" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_user_m_w_1a4f0b05538c2a961be57ba9198b46e7e8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>UserMW::UserMW</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>UserMW</name>
-        <qualifiedname>UserMW::UserMW</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>conf</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="159" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="class_user_m_w_1a92040b5c35cd75a774c1172d93bf2163" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>UserMW::~UserMW</definition>
-        <argsstring>()</argsstring>
-        <name>~UserMW</name>
-        <qualifiedname>UserMW::~UserMW</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserMW.H" line="162" column="3"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Potential and force of the Milky Way, a la Gala.</para>
-<para>!!!ADD ALL PARAMETERS YOU WANT TO DEFINE, using this format (for automatic documentation)!!! Done <parameterlist kind="param"><parameteritem>
-<parameternamelist>
-<parametername>G</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the gravitational constant</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>M_halo</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the total mass of the Navarro-Frank-White (NFW) halo component </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>rs_halo</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale radius of the Navarro-Frank-White (NFW) halo component</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>M_disk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the total mass of the Miyamoto-Nagai (MN) disk component </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>a_disk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale length of the Miyamoto-Nagai (MN) disk component </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>b_disk</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the scale height of the Miyamoto-Nagai (MN) disk component</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>M_nucl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the total mass of the <ref refid="class_hernquist" kindref="compound">Hernquist</ref> (HN) nucleus component </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>c_nucl</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the concentration of the <ref refid="class_hernquist" kindref="compound">Hernquist</ref> (HN) nucleus component</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>M_bulge</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the total mass of the <ref refid="class_hernquist" kindref="compound">Hernquist</ref> (HN) bulge component </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>c_bulge</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the concentration of the <ref refid="class_hernquist" kindref="compound">Hernquist</ref> (HN) bulge component</para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Ton</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the time at the center of the <computeroutput>erf</computeroutput> turn on </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>Toff</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the time at the center of the <computeroutput>erf</computeroutput> turn off </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>DeltaT</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>is the spread of the turn on </para>
-</parameterdescription>
-</parameteritem>
-<parameteritem>
-<parameternamelist>
-<parametername>ctrname</parametername>
-</parameternamelist>
-<parameterdescription>
-<para>defines the component that defines the center (otherwise the center is fixed to the origin) </para>
-</parameterdescription>
-</parameteritem>
-</parameterlist>
-</para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="1">
-        <label>UserMW</label>
-        <link refid="class_user_m_w"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="5">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="1">
-        <label>UserMW</label>
-        <link refid="class_user_m_w"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-      </node>
-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
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diff --git a/doxyxml/class_user_test.xml b/doxyxml/class_user_test.xml
deleted file mode 100644
index 04a88e4..0000000
--- a/doxyxml/class_user_test.xml
+++ /dev/null
@@ -1,243 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_user_test" kind="class" language="C++" prot="public">
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-    <basecompoundref refid="class_external_force" prot="public" virt="non-virtual">ExternalForce</basecompoundref>
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-        <definition>void * UserTest::determine_acceleration_and_potential_thread</definition>
-        <argsstring>(void *arg)</argsstring>
-        <name>determine_acceleration_and_potential_thread</name>
-        <qualifiedname>UserTest::determine_acceleration_and_potential_thread</qualifiedname>
-        <reimplements refid="class_external_force_1ae23fdc9cb99c6c1f8884b518659bfc5a">determine_acceleration_and_potential_thread</reimplements>
-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
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-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/user/UserTest.H" line="13" column="9"/>
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-        <definition>void UserTest::initialize</definition>
-        <argsstring>()</argsstring>
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-        <qualifiedname>UserTest::initialize</qualifiedname>
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-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/src/user/UserTest.H" line="14" column="8"/>
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-        <definition>UserTest::UserTest</definition>
-        <argsstring>(const YAML::Node &amp;conf)</argsstring>
-        <name>UserTest</name>
-        <qualifiedname>UserTest::UserTest</qualifiedname>
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-          <type>const YAML::Node &amp;</type>
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-<para>Constructor. </para>
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-        <name>~UserTest</name>
-        <qualifiedname>UserTest::~UserTest</qualifiedname>
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diff --git a/doxyxml/class_user_test_cuda.xml b/doxyxml/class_user_test_cuda.xml
deleted file mode 100644
index ae56c34..0000000
--- a/doxyxml/class_user_test_cuda.xml
+++ /dev/null
@@ -1,320 +0,0 @@
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diff --git a/doxyxml/class_vtk_grid.xml b/doxyxml/class_vtk_grid.xml
deleted file mode 100644
index 99ab72c..0000000
--- a/doxyxml/class_vtk_grid.xml
+++ /dev/null
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diff --git a/doxyxml/class_vtk_p_c_a.xml b/doxyxml/class_vtk_p_c_a.xml
deleted file mode 100644
index ae1735e..0000000
--- a/doxyxml/class_vtk_p_c_a.xml
+++ /dev/null
@@ -1,385 +0,0 @@
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-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="37" column="40" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="37" bodyend="-1"/>
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-      <memberdef kind="variable" id="class_vtk_p_c_a_1a476dac75711ab454b7de6f96f54881db" prot="private" static="no" mutable="no">
-        <type>std::vector&lt; <ref refid="_vtk_p_c_a_8_h_1a91ec4adb62732a5e935da8cd519eedca" kindref="member">vtkFloatArrayP</ref> &gt;</type>
-        <definition>std::vector&lt;vtkFloatArrayP&gt; VtkPCA::vecs</definition>
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-        <name>vecs</name>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="37" column="35" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="37" bodyend="-1"/>
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-        <type><ref refid="_vtk_p_c_a_8_h_1a91ec4adb62732a5e935da8cd519eedca" kindref="member">vtkFloatArrayP</ref></type>
-        <definition>vtkFloatArrayP VtkPCA::XX</definition>
-        <argsstring></argsstring>
-        <name>XX</name>
-        <qualifiedname>VtkPCA::XX</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="34" column="18" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="34" bodyend="-1"/>
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-        <definition>vtkFloatArrayP VtkPCA::YY</definition>
-        <argsstring></argsstring>
-        <name>YY</name>
-        <qualifiedname>VtkPCA::YY</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="34" column="21" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
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-        <type><ref refid="_vtk_p_c_a_8_h_1a91ec4adb62732a5e935da8cd519eedca" kindref="member">vtkFloatArrayP</ref></type>
-        <definition>vtkFloatArrayP VtkPCA::ZZ</definition>
-        <argsstring></argsstring>
-        <name>ZZ</name>
-        <qualifiedname>VtkPCA::ZZ</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="34" column="24" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="34" bodyend="-1"/>
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-    </sectiondef>
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-        <type>void</type>
-        <definition>void VtkPCA::Add</definition>
-        <argsstring>(const Eigen::VectorXd &amp;coef, const Eigen::VectorXd &amp;hall, const Eigen::VectorXd &amp;snr, const Eigen::VectorXd &amp;eval, const Eigen::MatrixXd &amp;evec, const Eigen::MatrixXd &amp;covr, int l, int m)</argsstring>
-        <name>Add</name>
-        <qualifiedname>VtkPCA::Add</qualifiedname>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>hall</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>snr</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>eval</declname>
-        </param>
-        <param>
-          <type>const Eigen::MatrixXd &amp;</type>
-          <declname>evec</declname>
-        </param>
-        <param>
-          <type>const Eigen::MatrixXd &amp;</type>
-          <declname>covr</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-<para>Add data for three-dimensional spherical basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="65" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_vtk_p_c_a_1af6d36246eafb57e753b018424a10a04a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void VtkPCA::Add</definition>
-        <argsstring>(const Eigen::VectorXd &amp;coef, const Eigen::VectorXd &amp;hall, const Eigen::VectorXd &amp;snr, const Eigen::VectorXd &amp;eval, const Eigen::MatrixXd &amp;evec, const Eigen::MatrixXd &amp;covr, int m)</argsstring>
-        <name>Add</name>
-        <qualifiedname>VtkPCA::Add</qualifiedname>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>coef</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>hall</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>snr</declname>
-        </param>
-        <param>
-          <type>const Eigen::VectorXd &amp;</type>
-          <declname>eval</declname>
-        </param>
-        <param>
-          <type>const Eigen::MatrixXd &amp;</type>
-          <declname>evec</declname>
-        </param>
-        <param>
-          <type>const Eigen::MatrixXd &amp;</type>
-          <declname>covr</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>m</declname>
-        </param>
-        <briefdescription>
-<para>Add data for two-dimensional cylindrical basis. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="56" column="8"/>
-      </memberdef>
-      <memberdef kind="function" id="class_vtk_p_c_a_1a6cb1a01c132517df484042012c20c0a0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>VtkPCA::VtkPCA</definition>
-        <argsstring>(int N, bool reorder=false, bool smooth=false)</argsstring>
-        <name>VtkPCA</name>
-        <qualifiedname>VtkPCA::VtkPCA</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>N</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>reorder</declname>
-          <defval>false</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>smooth</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="53" column="3"/>
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-      <memberdef kind="function" id="class_vtk_p_c_a_1a7bd7eb05e3b1389a80a40b20052b9d8a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void VtkPCA::Write</definition>
-        <argsstring>(const std::string &amp;name)</argsstring>
-        <name>Write</name>
-        <qualifiedname>VtkPCA::Write</qualifiedname>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>name</declname>
-        </param>
-        <briefdescription>
-<para>Write output file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="74" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/VtkPCA.H" line="28" column="1" bodyfile="/home/weinberg/Projects/EXP/include/VtkPCA.H" bodystart="29" bodyend="75"/>
-    <listofallmembers>
-      <member refid="class_vtk_p_c_a_1af6d36246eafb57e753b018424a10a04a" prot="public" virt="non-virtual"><scope>VtkPCA</scope><name>Add</name></member>
-      <member refid="class_vtk_p_c_a_1ad42aa1abf8a2af689257d82870a8d36e" prot="public" virt="non-virtual"><scope>VtkPCA</scope><name>Add</name></member>
-      <member refid="class_vtk_p_c_a_1a3c052b1682c2652bc67b2abb8e2966f9" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>coef</name></member>
-      <member refid="class_vtk_p_c_a_1ada851bd4911ed7e3c2b69bbfd8f67f19" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>covr</name></member>
-      <member refid="class_vtk_p_c_a_1adf0630702b2d1ba4e3844b9975d57394" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>dataSet</name></member>
-      <member refid="class_vtk_p_c_a_1abafaa3454c68c75a2a5b953e06a99c7c" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>elab</name></member>
-      <member refid="class_vtk_p_c_a_1a4ab2e59898e7b08c5617c89b8aa45b0b" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>eval</name></member>
-      <member refid="class_vtk_p_c_a_1aea0050b4ffee839446dcca6db24cdd5a" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>hall</name></member>
-      <member refid="class_vtk_p_c_a_1a8e13bbdbb04ea956d8514a559964447b" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>nmax</name></member>
-      <member refid="class_vtk_p_c_a_1a29622983a8eaa1f6e479255cc4844fb7" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>reorder</name></member>
-      <member refid="class_vtk_p_c_a_1a78ec19a3be1ba9f610f2739a4de4c5ef" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>smooth</name></member>
-      <member refid="class_vtk_p_c_a_1a524e77563003b220502c69780fe10365" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>snrv</name></member>
-      <member refid="class_vtk_p_c_a_1af9aa2a7137688d618d19b5e12f58744c" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>vec2</name></member>
-      <member refid="class_vtk_p_c_a_1a476dac75711ab454b7de6f96f54881db" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>vecs</name></member>
-      <member refid="class_vtk_p_c_a_1a6cb1a01c132517df484042012c20c0a0" prot="public" virt="non-virtual"><scope>VtkPCA</scope><name>VtkPCA</name></member>
-      <member refid="class_vtk_p_c_a_1a7bd7eb05e3b1389a80a40b20052b9d8a" prot="public" virt="non-virtual"><scope>VtkPCA</scope><name>Write</name></member>
-      <member refid="class_vtk_p_c_a_1ad911f39deea5ed996a6f1cfdf6eb1de0" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>XX</name></member>
-      <member refid="class_vtk_p_c_a_1a3f20f2da79dd81719ef200177de0bcc5" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>YY</name></member>
-      <member refid="class_vtk_p_c_a_1a0a064267f75edf03f0b1445b2bd78f58" prot="private" virt="non-virtual"><scope>VtkPCA</scope><name>ZZ</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_yaml_config_error.xml b/doxyxml/class_yaml_config_error.xml
deleted file mode 100644
index f8154b2..0000000
--- a/doxyxml/class_yaml_config_error.xml
+++ /dev/null
@@ -1,116 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_yaml_config_error" kind="class" language="C++" prot="public">
-    <compoundname>YamlConfigError</compoundname>
-    <basecompoundref refid="class_e_x_p_exception" prot="public" virt="non-virtual">EXPException</basecompoundref>
-    <includes refid="_e_x_p_exception_8_h" local="no">EXPException.H</includes>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="class_yaml_config_error_1a6e0047ddac6bf920e374409c68c39658" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>YamlConfigError::YamlConfigError</definition>
-        <argsstring>(const std::string classname, const std::string type, const std::set&lt; std::string &gt; keys, const std::string sourcefilename, int sourcelinenumber, int errorcode=-1, bool deadlock=false)</argsstring>
-        <name>YamlConfigError</name>
-        <qualifiedname>YamlConfigError::YamlConfigError</qualifiedname>
-        <param>
-          <type>const std::string</type>
-          <declname>classname</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>type</declname>
-        </param>
-        <param>
-          <type>const std::set&lt; std::string &gt;</type>
-          <declname>keys</declname>
-        </param>
-        <param>
-          <type>const std::string</type>
-          <declname>sourcefilename</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>sourcelinenumber</declname>
-        </param>
-        <param>
-          <type>int</type>
-          <declname>errorcode</declname>
-          <defval>-1</defval>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>deadlock</declname>
-          <defval>false</defval>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPException.H" line="250" column="3" bodyfile="/home/weinberg/Projects/EXP/include/EXPException.H" bodystart="250" bodyend="265"/>
-        <references refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" compoundref="_e_x_p_exception_8_h" startline="95">EXPException::errormessage</references>
-        <references refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" compoundref="_e_x_p_exception_8_h" startline="92">EXPException::exceptionname</references>
-        <references refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" compoundref="_e_x_p_exception_8_h" startline="46" endline="56">EXPException::getErrorMessage</references>
-        <references refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" compoundref="_e_x_p_exception_8_h" startline="98">EXPException::msg_</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Configuration error. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>EXPException</label>
-        <link refid="class_e_x_p_exception"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>YamlConfigError</label>
-        <link refid="class_yaml_config_error"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>std::exception</label>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="2">
-        <label>EXPException</label>
-        <link refid="class_e_x_p_exception"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>YamlConfigError</label>
-        <link refid="class_yaml_config_error"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>std::exception</label>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/EXPException.H" line="246" column="1" bodyfile="/home/weinberg/Projects/EXP/include/EXPException.H" bodystart="247" bodyend="266"/>
-    <listofallmembers>
-      <member refid="class_e_x_p_exception_1a7eb7ca3947f083c8c90af7cb175a5c1f" prot="protected" virt="non-virtual"><scope>YamlConfigError</scope><name>deadlock</name></member>
-      <member refid="class_e_x_p_exception_1af449369cc9861ab054ff93091f7b336d" prot="protected" virt="non-virtual"><scope>YamlConfigError</scope><name>errorcode</name></member>
-      <member refid="class_e_x_p_exception_1a455a82586fea6cb6dde689248f935ebe" prot="protected" virt="non-virtual"><scope>YamlConfigError</scope><name>errormessage</name></member>
-      <member refid="class_e_x_p_exception_1abedf6793a2b2179109e2bdd078bb7932" prot="protected" virt="non-virtual"><scope>YamlConfigError</scope><name>exceptionname</name></member>
-      <member refid="class_e_x_p_exception_1a05ed8d4532303db80cf357b9da1e8a38" prot="public" virt="non-virtual"><scope>YamlConfigError</scope><name>EXPException</name></member>
-      <member refid="class_e_x_p_exception_1aa2df34e676cdd1aeae016eb1fdc62489" prot="protected" virt="non-virtual"><scope>YamlConfigError</scope><name>EXPException</name></member>
-      <member refid="class_e_x_p_exception_1a47936a221431359a96c20ab5363d9f1c" prot="public" virt="non-virtual"><scope>YamlConfigError</scope><name>getDeadlock</name></member>
-      <member refid="class_e_x_p_exception_1a2428b09c9f0c5dddf9fbefbcbbbcb6fd" prot="public" virt="non-virtual"><scope>YamlConfigError</scope><name>getErrorcode</name></member>
-      <member refid="class_e_x_p_exception_1a2dddb79cfcbc69b6c8d17a1a4d266254" prot="public" virt="non-virtual"><scope>YamlConfigError</scope><name>getErrorMessage</name></member>
-      <member refid="class_e_x_p_exception_1a324b5544f08b63b6848784fbfc45d200" prot="protected" virt="non-virtual"><scope>YamlConfigError</scope><name>msg_</name></member>
-      <member refid="class_e_x_p_exception_1a1b71a61474e5879a5d9cf580cd9136ea" prot="private" virt="non-virtual"><scope>YamlConfigError</scope><name>sourcefilename</name></member>
-      <member refid="class_e_x_p_exception_1a9d83f01ff76b34bf89d65910c8c43643" prot="private" virt="non-virtual"><scope>YamlConfigError</scope><name>sourcelinenumber</name></member>
-      <member refid="class_e_x_p_exception_1a70b8b589dba043be10dc65482e56769a" prot="public" virt="virtual"><scope>YamlConfigError</scope><name>what</name></member>
-      <member refid="class_yaml_config_error_1a6e0047ddac6bf920e374409c68c39658" prot="public" virt="non-virtual"><scope>YamlConfigError</scope><name>YamlConfigError</name></member>
-      <member refid="class_e_x_p_exception_1aba9356b726727d39e19c88ca2be5e846" prot="public" virt="virtual"><scope>YamlConfigError</scope><name>~EXPException</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/class_z_brent.xml b/doxyxml/class_z_brent.xml
deleted file mode 100644
index d569e65..0000000
--- a/doxyxml/class_z_brent.xml
+++ /dev/null
@@ -1,145 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_z_brent" kind="class" language="C++" prot="public">
-    <compoundname>ZBrent</compoundname>
-    <includes refid="_z_brent_8_h" local="no">ZBrent.H</includes>
-    <templateparamlist>
-      <param>
-        <type>class T</type>
-      </param>
-    </templateparamlist>
-    <sectiondef kind="private-type">
-      <memberdef kind="typedef" id="class_z_brent_1a10af6ea5ce242942973c6f33e22b0b54" prot="private" static="no">
-        <type>std::function&lt; double(double, T &amp;)&gt;</type>
-        <definition>using ZBrent&lt; T &gt;::func_T =  std::function&lt;double(double, T&amp;)&gt;</definition>
-        <argsstring></argsstring>
-        <name>func_T</name>
-        <qualifiedname>ZBrent::func_T</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <name>epsilon</name>
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-        <initializer>=1.0e-3</initializer>
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-        <name>ITMAX</name>
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-        <briefdescription>
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-        <detaileddescription>
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-        <inbodydescription>
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-          <type>double</type>
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-          <type>double</type>
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-          <type>double &amp;</type>
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diff --git a/doxyxml/class_zang_disk.xml b/doxyxml/class_zang_disk.xml
deleted file mode 100644
index 1aa0aac..0000000
--- a/doxyxml/class_zang_disk.xml
+++ /dev/null
@@ -1,692 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="class_zang_disk" kind="class" language="C++" prot="public">
-    <compoundname>ZangDisk</compoundname>
-    <basecompoundref refid="class_axi_sym_model" prot="public" virt="non-virtual">AxiSymModel</basecompoundref>
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-        <type>double</type>
-        <definition>double ZangDisk::a</definition>
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-        <name>a</name>
-        <qualifiedname>ZangDisk::a</qualifiedname>
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-        </briefdescription>
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-        <referencedby refid="class_zang_disk_1a2c7d653d4969a09a92f4b64e0d1a50ab" compoundref="zang_8_h" startline="22" endline="26">drdz</referencedby>
-        <referencedby refid="class_zang_disk_1a9863b21a361941c03421696e7918ea52" compoundref="zang_8_h" startline="31" endline="42">ZangDisk</referencedby>
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-        <type>double</type>
-        <definition>double ZangDisk::c</definition>
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-        <name>c</name>
-        <qualifiedname>ZangDisk::c</qualifiedname>
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-        </briefdescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/zang.H" line="10" column="10" bodyfile="/home/weinberg/Projects/EXP/include/zang.H" bodystart="10" bodyend="-1"/>
-        <referencedby refid="class_zang_disk_1a9863b21a361941c03421696e7918ea52" compoundref="zang_8_h" startline="31" endline="42">ZangDisk</referencedby>
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-        <definition>double ZangDisk::F</definition>
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-        <qualifiedname>ZangDisk::F</qualifiedname>
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-        </briefdescription>
-        <detaileddescription>
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-        <type>double</type>
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-        <references refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" compoundref="zang_8_h" startline="16">F</references>
-        <references refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" compoundref="zang_8_h" startline="15">q</references>
-        <references refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" compoundref="zang_8_h" startline="13">sig2</references>
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-        <definition>double ZangDisk::dfde</definition>
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-        <param>
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-        <param>
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-        <briefdescription>
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-        <detaileddescription>
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-        <references refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" compoundref="zang_8_h" startline="16">F</references>
-        <references refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" compoundref="zang_8_h" startline="15">q</references>
-        <references refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" compoundref="zang_8_h" startline="13">sig2</references>
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-        <type>double</type>
-        <definition>double ZangDisk::dfdl</definition>
-        <argsstring>(double E, double L)</argsstring>
-        <name>dfdl</name>
-        <qualifiedname>ZangDisk::dfdl</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a120cec5af54e43d727f83df8678cc93b">dfdl</reimplements>
-        <param>
-          <type>double</type>
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-        <param>
-          <type>double</type>
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-        <references refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" compoundref="zang_8_h" startline="16">F</references>
-        <references refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" compoundref="zang_8_h" startline="15">q</references>
-        <references refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" compoundref="zang_8_h" startline="13">sig2</references>
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-      <memberdef kind="function" id="class_zang_disk_1aa02e1cde2307d39a49f01005f95800c5" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type>double</type>
-        <definition>double ZangDisk::distf</definition>
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-        <reimplements refid="class_axi_sym_model_1a5530c3612f1c09c6c77401a9e21550b8">distf</reimplements>
-        <param>
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-        <param>
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-          <declname>L</declname>
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-        <briefdescription>
-<para>Distribution function. </para>
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-        <references refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" compoundref="zang_8_h" startline="16">F</references>
-        <references refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" compoundref="zang_8_h" startline="15">q</references>
-        <references refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" compoundref="zang_8_h" startline="13">sig2</references>
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-        <type>double</type>
-        <definition>double ZangDisk::get_density</definition>
-        <argsstring>(const double r)</argsstring>
-        <name>get_density</name>
-        <qualifiedname>ZangDisk::get_density</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a">get_density</reimplements>
-        <param>
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-        <briefdescription>
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-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/zang.H" line="53" column="10" bodyfile="/home/weinberg/Projects/EXP/include/zang.H" bodystart="53" bodyend="57"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double ZangDisk::get_dpot</definition>
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-        <param>
-          <type>const double</type>
-          <declname>r</declname>
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-        <briefdescription>
-<para>Return the untapered potential gradient. </para>
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-        <location file="/home/weinberg/Projects/EXP/include/zang.H" line="67" column="10" bodyfile="/home/weinberg/Projects/EXP/include/zang.H" bodystart="67" bodyend="71"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double ZangDisk::get_dpot2</definition>
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-        <name>get_dpot2</name>
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-        <param>
-          <type>const double</type>
-          <declname>r</declname>
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-        <briefdescription>
-<para>Return the untapered potential 2nd gradient. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/zang.H" line="74" column="10" bodyfile="/home/weinberg/Projects/EXP/include/zang.H" bodystart="74" bodyend="78"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double ZangDisk::get_mass</definition>
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-        <qualifiedname>ZangDisk::get_mass</qualifiedname>
-        <reimplements refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465">get_mass</reimplements>
-        <param>
-          <type>const double</type>
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-        <briefdescription>
-<para>Access the profile. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/zang.H" line="47" column="10" bodyfile="/home/weinberg/Projects/EXP/include/zang.H" bodystart="47" bodyend="51"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>double</type>
-        <definition>double ZangDisk::get_pot</definition>
-        <argsstring>(const double r)</argsstring>
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-        <reimplements refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba">get_pot</reimplements>
-        <param>
-          <type>const double</type>
-          <declname>r</declname>
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-        <briefdescription>
-<para>Return the untapered potential. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/zang.H" line="60" column="10" bodyfile="/home/weinberg/Projects/EXP/include/zang.H" bodystart="60" bodyend="64"/>
-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-        <type>void</type>
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-        <param>
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-        <param>
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-        <param>
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-        <references refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" compoundref="massmodel_8_h" startline="100" endline="105">MassModel::bomb</references>
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-<para>Addiional member functions. </para>
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-        <param>
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-        <param>
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-        <references refid="class_mass_model_1acf360c000464aca6299bc47894672d70" compoundref="massmodel_8_h" startline="81">MassModel::ModelID</references>
-        <references refid="class_zang_disk_1a53669491b3cf485d69cd572e0cf68bc1" compoundref="zang_8_h" startline="12">mu</references>
-        <references refid="class_zang_disk_1a95716d04649cfb816139557160711840" compoundref="zang_8_h" startline="11">nu</references>
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-      <node id="3">
-        <label>MassModel</label>
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-        <link refid="class_regular_orbit"/>
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-      <member refid="class_zang_disk_1a4861ccfe9095adf5f3027136791b2f1e" prot="public" virt="virtual"><scope>ZangDisk</scope><name>dfde</name></member>
-      <member refid="class_zang_disk_1a0529f2413ec4eff191d2a2b9f7093bc4" prot="public" virt="virtual"><scope>ZangDisk</scope><name>dfdl</name></member>
-      <member refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" prot="public" virt="non-virtual"><scope>ZangDisk</scope><name>dim</name></member>
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diff --git a/doxyxml/classbw__struct.xml b/doxyxml/classbw__struct.xml
deleted file mode 100644
index ccb1fab..0000000
--- a/doxyxml/classbw__struct.xml
+++ /dev/null
@@ -1,189 +0,0 @@
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diff --git a/doxyxml/classcircular__buffer.xml b/doxyxml/classcircular__buffer.xml
deleted file mode 100644
index fac5ec2..0000000
--- a/doxyxml/classcircular__buffer.xml
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-<para>Circular buffer implementation from <ulink url="https://github.com/vinitjames/circularbuffer">https://github.com/vinitjames/circularbuffer</ulink> to temporarily replace the boost::circular_buffer implementation. Hopefully, this can be replaced by STL eventually. </para>
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diff --git a/doxyxml/classcoulomb_select.xml b/doxyxml/classcoulomb_select.xml
deleted file mode 100644
index 8d60a5c..0000000
--- a/doxyxml/classcoulomb_select.xml
+++ /dev/null
@@ -1,285 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="classcoulomb_select" kind="class" language="C++" prot="public">
-    <compoundname>coulombSelect</compoundname>
-    <includes refid="_b_n_8_h" local="no">BN.H</includes>
-    <sectiondef kind="private-attrib">
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-        <type>std::vector&lt; double &gt;</type>
-        <definition>std::vector&lt;double&gt; coulombSelect::cA</definition>
-        <argsstring></argsstring>
-        <name>cA</name>
-        <qualifiedname>coulombSelect::cA</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/BN.H" line="51" column="18" bodyfile="/home/weinberg/Projects/EXP/src/BN.H" bodystart="51" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>cT</name>
-        <qualifiedname>coulombSelect::cT</qualifiedname>
-        <briefdescription>
-<para>Array grids. </para>
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-        <detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/BN.H" line="51" column="15" bodyfile="/home/weinberg/Projects/EXP/src/BN.H" bodystart="51" bodyend="-1"/>
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-        <name>numT</name>
-        <qualifiedname>coulombSelect::numT</qualifiedname>
-        <initializer>= 2000</initializer>
-        <briefdescription>
-<para>Tau evaluation grid. </para>
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-        <detaileddescription>
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-        <qualifiedname>coulombSelect::tau_f</qualifiedname>
-        <initializer>= 4.0</initializer>
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-        <type>double</type>
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deleted file mode 100644
index 7c38a2d..0000000
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deleted file mode 100644
index 2cc93f5..0000000
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deleted file mode 100644
index 73f6e26..0000000
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deleted file mode 100644
index c80f30d..0000000
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deleted file mode 100644
index 2e1c3c0..0000000
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deleted file mode 100644
index bb63a50..0000000
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deleted file mode 100644
index b8164b1..0000000
--- a/doxyxml/classcxxopts_1_1_option_spec_exception.xml
+++ /dev/null
@@ -1,87 +0,0 @@
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deleted file mode 100644
index 99b3a4f..0000000
--- a/doxyxml/classcxxopts_1_1_option_value.xml
+++ /dev/null
@@ -1,243 +0,0 @@
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deleted file mode 100644
index c3a92f8..0000000
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-        <name>ParseResult</name>
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-        <type></type>
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-        <argsstring>(NameHashMap &amp;&amp;keys, ParsedHashMap &amp;&amp;values, std::vector&lt; KeyValue &gt; sequential, std::vector&lt; KeyValue &gt; default_opts, std::vector&lt; std::string &gt; &amp;&amp;unmatched_args)</argsstring>
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diff --git a/doxyxml/classcxxopts_1_1_parse_result_1_1_iterator.xml b/doxyxml/classcxxopts_1_1_parse_result_1_1_iterator.xml
deleted file mode 100644
index d2931a7..0000000
--- a/doxyxml/classcxxopts_1_1_parse_result_1_1_iterator.xml
+++ /dev/null
@@ -1,308 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="classcxxopts_1_1_parse_result_1_1_iterator" kind="class" language="C++" prot="public">
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-    <includes refid="cxxopts_8_h" local="no">cxxopts.H</includes>
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-        <type>void</type>
-        <definition>using cxxopts::ParseResult::Iterator::difference_type =  void</definition>
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-        <name>difference_type</name>
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-        <definition>using cxxopts::ParseResult::Iterator::reference =  const KeyValue&amp;</definition>
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deleted file mode 100644
index 8a04ddb..0000000
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deleted file mode 100644
index c2c64bb..0000000
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deleted file mode 100644
index a4cf950..0000000
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deleted file mode 100644
index 642b259..0000000
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index 0a75723..0000000
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deleted file mode 100644
index 491f23b..0000000
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deleted file mode 100644
index 750b7b2..0000000
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deleted file mode 100644
index 8d55189..0000000
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deleted file mode 100644
index 65a7a5b..0000000
--- a/doxyxml/classcxxopts_1_1option__required__exception.xml
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deleted file mode 100644
index 9728eea..0000000
--- a/doxyxml/classcxxopts_1_1option__requires__argument__exception.xml
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deleted file mode 100644
index 738e169..0000000
--- a/doxyxml/classcxxopts_1_1option__syntax__exception.xml
+++ /dev/null
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deleted file mode 100644
index a3bf4f2..0000000
--- a/doxyxml/classcxxopts_1_1values_1_1abstract__value.xml
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deleted file mode 100644
index 5e78703..0000000
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index d269c2d..0000000
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diff --git a/doxyxml/classdiskbulge.xml b/doxyxml/classdiskbulge.xml
deleted file mode 100644
index 414a5d6..0000000
--- a/doxyxml/classdiskbulge.xml
+++ /dev/null
@@ -1,229 +0,0 @@
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diff --git a/doxyxml/classexternal_shock.xml b/doxyxml/classexternal_shock.xml
deleted file mode 100644
index 68890bb..0000000
--- a/doxyxml/classexternal_shock.xml
+++ /dev/null
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diff --git a/doxyxml/classfoarray.xml b/doxyxml/classfoarray.xml
deleted file mode 100644
index f5977b0..0000000
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diff --git a/doxyxml/classgenerate_relaxation.xml b/doxyxml/classgenerate_relaxation.xml
deleted file mode 100644
index c42b040..0000000
--- a/doxyxml/classgenerate_relaxation.xml
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diff --git a/doxyxml/classkdtree.xml b/doxyxml/classkdtree.xml
deleted file mode 100644
index 6787d35..0000000
--- a/doxyxml/classkdtree.xml
+++ /dev/null
@@ -1,534 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="classkdtree" kind="class" language="C++" prot="public">
-    <compoundname>kdtree</compoundname>
-    <includes refid="_k_dtree_8_h" local="no">KDtree.H</includes>
-    <innerclass refid="structkdtree_1_1node" prot="private">kdtree::node</innerclass>
-    <innerclass refid="structkdtree_1_1node__cmp" prot="private">kdtree::node_cmp</innerclass>
-    <templateparamlist>
-      <param>
-        <type>typename coordinate_type</type>
-      </param>
-      <param>
-        <type>size_t</type>
-        <declname>dimensions</declname>
-        <defname>dimensions</defname>
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-        <type><ref refid="classpoint" kindref="compound">point</ref>&lt; coordinate_type, dimensions &gt;</type>
-        <definition>typedef point&lt;coordinate_type, dimensions&gt; kdtree&lt; coordinate_type, dimensions &gt;::point_type</definition>
-        <argsstring></argsstring>
-        <name>point_type</name>
-        <qualifiedname>kdtree::point_type</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="166" column="17" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="166" bodyend="-1"/>
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-        <argsstring></argsstring>
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-        <type>std::vector&lt; <ref refid="structkdtree_1_1node" kindref="compound">node</ref> &gt;</type>
-        <definition>std::vector&lt;node&gt; kdtree&lt; coordinate_type, dimensions &gt;::nodes_</definition>
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diff --git a/doxyxml/classlargest_values.xml b/doxyxml/classlargest_values.xml
deleted file mode 100644
index 2637c0f..0000000
--- a/doxyxml/classlargest_values.xml
+++ /dev/null
@@ -1,133 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="classlargest_values" kind="class" language="C++" prot="public">
-    <compoundname>largestValues</compoundname>
-    <includes refid="largest_8_h" local="no">largest.H</includes>
-    <templateparamlist>
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-        <type>class U</type>
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-    </templateparamlist>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="classlargest_values_1aa281b8f0458b01c2e8d77c995baffb46" prot="private" static="no" mutable="no">
-        <type>int</type>
-        <definition>int largestValues&lt; U &gt;::maxSize</definition>
-        <argsstring></argsstring>
-        <name>maxSize</name>
-        <qualifiedname>largestValues::maxSize</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" line="50" column="7" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" bodystart="50" bodyend="-1"/>
-        <referencedby refid="classlargest_values_1a0464850f712edff25999b530d77c429f" compoundref="largest_8_h" startline="17" endline="28">largestValues&lt; U &gt;::operator()</referencedby>
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-      <memberdef kind="variable" id="classlargest_values_1a415295691baa182aff9819d24c0622a0" prot="private" static="no" mutable="no">
-        <type>std::priority_queue&lt; U, std::vector&lt; U &gt;, std::greater&lt; U &gt; &gt;</type>
-        <definition>std::priority_queue&lt;U, std::vector&lt;U&gt;, std::greater&lt;U&gt; &gt; largestValues&lt; U &gt;::pq</definition>
-        <argsstring></argsstring>
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-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" line="49" column="23" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" bodystart="49" bodyend="-1"/>
-        <referencedby refid="classlargest_values_1a270980481483b26273f3ce69fa9c62f0" compoundref="largest_8_h" startline="43" endline="45">largestValues&lt; U &gt;::clear</referencedby>
-        <referencedby refid="classlargest_values_1a662b1f515af03b151f90623cabfe567e" compoundref="largest_8_h" startline="31" endline="40">largestValues&lt; U &gt;::getValues</referencedby>
-        <referencedby refid="classlargest_values_1a0464850f712edff25999b530d77c429f" compoundref="largest_8_h" startline="17" endline="28">largestValues&lt; U &gt;::operator()</referencedby>
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-        <type>void</type>
-        <definition>void largestValues&lt; U &gt;::clear</definition>
-        <argsstring>()</argsstring>
-        <name>clear</name>
-        <qualifiedname>largestValues::clear</qualifiedname>
-        <briefdescription>
-<para>Empty the queue. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" line="43" column="8" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" bodystart="43" bodyend="45"/>
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-        <type>std::vector&lt; U &gt;</type>
-        <definition>std::vector&lt; U &gt; largestValues&lt; U &gt;::getValues</definition>
-        <argsstring>()</argsstring>
-        <name>getValues</name>
-        <qualifiedname>largestValues::getValues</qualifiedname>
-        <briefdescription>
-<para>Get the current list of values. </para>
-        </briefdescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" line="31" column="15" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" bodystart="31" bodyend="40"/>
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-        <type></type>
-        <definition>largestValues&lt; U &gt;::largestValues</definition>
-        <argsstring>(int size)</argsstring>
-        <name>largestValues</name>
-        <qualifiedname>largestValues::largestValues</qualifiedname>
-        <param>
-          <type>int</type>
-          <declname>size</declname>
-        </param>
-        <briefdescription>
-<para>Construtor: size is the desired size of the heap. </para>
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-        <location file="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" line="14" column="3" bodyfile="/home/weinberg/Projects/EXP/utils/Analysis/largest.H" bodystart="14" bodyend="14"/>
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-        <type>void</type>
-        <definition>void largestValues&lt; U &gt;::operator()</definition>
-        <argsstring>(U data)</argsstring>
-        <name>operator()</name>
-        <qualifiedname>largestValues::operator()</qualifiedname>
-        <param>
-          <type>U</type>
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-<para>Add a new value set. </para>
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diff --git a/doxyxml/classnv_tracer.xml b/doxyxml/classnv_tracer.xml
deleted file mode 100644
index 106b690..0000000
--- a/doxyxml/classnv_tracer.xml
+++ /dev/null
@@ -1,50 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="classnv_tracer" kind="class" language="C++" prot="public">
-    <compoundname>nvTracer</compoundname>
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diff --git a/doxyxml/classpermutation.xml b/doxyxml/classpermutation.xml
deleted file mode 100644
index 0dcc084..0000000
--- a/doxyxml/classpermutation.xml
+++ /dev/null
@@ -1,163 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="classpermutation" kind="class" language="C++" prot="public">
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-        <definition>std::mt19937 permutation::g</definition>
-        <argsstring></argsstring>
-        <name>g</name>
-        <qualifiedname>permutation::g</qualifiedname>
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-        <referencedby refid="classpermutation_1aff5c189cdce245b00d11ecd9cd1e186d" compoundref="permutation_8_h" startline="48" endline="64">seed19937</referencedby>
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-        <type>size_t</type>
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-        <qualifiedname>permutation::operator[]</qualifiedname>
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-<para>The permutation operator. </para>
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-<para>Initialize and generate the identity permutation</para>
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-<parameterdescription>
-<para>set to true will seed every value in the mt19937 state. This will produce better randomness at higher startup cost. </para>
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-<para>Create and share the random permutation. </para>
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-        <briefdescription>
-<para>Seed the Mersenne Twister from the random device. </para>
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-<para>Make a permutation index. Share will MPI nodes if MPI is active.</para>
-<para>This implementation should fall back politely to single processor use. </para>
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diff --git a/doxyxml/classpoint.xml b/doxyxml/classpoint.xml
deleted file mode 100644
index c7a3923..0000000
--- a/doxyxml/classpoint.xml
+++ /dev/null
@@ -1,427 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="classpoint" kind="class" language="C++" prot="public">
-    <compoundname>point</compoundname>
-    <includes refid="_k_dtree_8_h" local="no">KDtree.H</includes>
-    <templateparamlist>
-      <param>
-        <type>typename coordinate_type</type>
-      </param>
-      <param>
-        <type>size_t</type>
-        <declname>dimensions</declname>
-        <defname>dimensions</defname>
-      </param>
-    </templateparamlist>
-    <sectiondef kind="private-attrib">
-      <memberdef kind="variable" id="classpoint_1a967abf581716d86a2735631f2118e862" prot="private" static="no" mutable="no">
-        <type>std::array&lt; coordinate_type, dimensions &gt;</type>
-        <definition>std::array&lt;coordinate_type, dimensions&gt; point&lt; coordinate_type, dimensions &gt;::coords_</definition>
-        <argsstring></argsstring>
-        <name>coords_</name>
-        <qualifiedname>point::coords_</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="141" column="14" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="141" bodyend="-1"/>
-        <referencedby refid="classpoint_1ad627b50ee8e9fcfc20f24323aa4ab88d" compoundref="_k_dtree_8_h" startline="84" endline="87">point&lt; coordinate_type, dimensions &gt;::get</referencedby>
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-        <name>indx_</name>
-        <qualifiedname>point::indx_</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="144" column="17" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="144" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double point&lt; coordinate_type, dimensions &gt;::mass_</definition>
-        <argsstring></argsstring>
-        <name>mass_</name>
-        <qualifiedname>point::mass_</qualifiedname>
-        <briefdescription>
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-        <definition>std::array&lt;coordinate_type, dimensions&gt; point&lt; coordinate_type, dimensions &gt;::vels_</definition>
-        <argsstring></argsstring>
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-<para>dimension index (zero based) </para>
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-</simplesect>
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diff --git a/doxyxml/classprogress_1_1progress__display.xml b/doxyxml/classprogress_1_1progress__display.xml
deleted file mode 100644
index 1f51ac3..0000000
--- a/doxyxml/classprogress_1_1progress__display.xml
+++ /dev/null
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-        <type>unsigned long</type>
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diff --git a/doxyxml/classpsp__io_1_1_input.xml b/doxyxml/classpsp__io_1_1_input.xml
deleted file mode 100644
index 1f2f634..0000000
--- a/doxyxml/classpsp__io_1_1_input.xml
+++ /dev/null
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----------------
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-  .zvel     : float, the z velocity
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deleted file mode 100644
index 5e36666..0000000
--- a/doxyxml/classpsp__io_1_1_o_u_t_input.xml
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----------------
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----------------
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diff --git a/doxyxml/classpsp__io_1_1_s_p_l_input.xml b/doxyxml/classpsp__io_1_1_s_p_l_input.xml
deleted file mode 100644
index 455cfd5..0000000
--- a/doxyxml/classpsp__io_1_1_s_p_l_input.xml
+++ /dev/null
@@ -1,241 +0,0 @@
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----------------
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----------------
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diff --git a/doxyxml/classtidal_field.xml b/doxyxml/classtidal_field.xml
deleted file mode 100644
index d5ca540..0000000
--- a/doxyxml/classtidal_field.xml
+++ /dev/null
@@ -1,296 +0,0 @@
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-        <param>
-          <type>void *</type>
-          <declname>arg</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Multithreaded method (must be thread safe) for force computation that must be provided by all derived classes (hence pure virtual) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tidalField.H" line="24" column="9"/>
-      </memberdef>
-      <memberdef kind="function" id="classtidal_field_1a5dbcac9de363aea682f1dd910be51c02" prot="private" static="no" const="no" explicit="no" inline="no" virt="virtual">
-        <type>void</type>
-        <definition>void tidalField::initialize</definition>
-        <argsstring>()</argsstring>
-        <name>initialize</name>
-        <qualifiedname>tidalField::initialize</qualifiedname>
-        <reimplements refid="class_pot_accel_1ada60d03bc82b8740fc7275d4c3f2149d">initialize</reimplements>
-        <briefdescription>
-<para>Used by derived class to initialize any storage and parameters. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tidalField.H" line="21" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="classtidal_field_1acef78f19075d1f0a30d542aca9889c1d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type></type>
-        <definition>tidalField::tidalField</definition>
-        <argsstring>(const YAML::Node &amp;config)</argsstring>
-        <name>tidalField</name>
-        <qualifiedname>tidalField::tidalField</qualifiedname>
-        <param>
-          <type>const YAML::Node &amp;</type>
-          <declname>config</declname>
-        </param>
-        <briefdescription>
-<para>Constructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tidalField.H" line="32" column="3"/>
-      </memberdef>
-      <memberdef kind="function" id="classtidal_field_1ab816612a12c9fbd164d2f46e6f507a21" prot="public" static="no" const="no" explicit="no" inline="yes" virt="virtual">
-        <type></type>
-        <definition>virtual tidalField::~tidalField</definition>
-        <argsstring>()</argsstring>
-        <name>~tidalField</name>
-        <qualifiedname>tidalField::~tidalField</qualifiedname>
-        <briefdescription>
-<para>Destructor. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tidalField.H" line="35" column="11" bodyfile="/home/weinberg/Projects/EXP/src/tidalField.H" bodystart="35" bodyend="35"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Compute tidal acceleration and potential in the Hills limit. </para>
-    </briefdescription>
-    <detaileddescription>
-<para>The calculation is done in a frame having its cartesian axis directions fixed in space; i.e., the system is <emphasis>not</emphasis> phase locked with the perturber as is usually the case. Unfortunately, I know of no conserved quantities in this frame. <linebreak/>
- <computeroutput>int freeze_particle(int i)</computeroutput> <linebreak/>
- Freeze the i-th particle if it has gone too far away from the origin. </para>
-    </detaileddescription>
-    <inheritancegraph>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-      </node>
-      <node id="1">
-        <label>tidalField</label>
-        <link refid="classtidal_field"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </inheritancegraph>
-    <collaborationgraph>
-      <node id="5">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="8" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
-        </childnode>
-      </node>
-      <node id="7">
-        <label>EL3</label>
-        <link refid="class_e_l3"/>
-      </node>
-      <node id="2">
-        <label>ExternalForce</label>
-        <link refid="class_external_force"/>
-        <childnode refid="3" relation="public-inheritance">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="7" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="3">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="4" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="5" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Timer</label>
-        <link refid="class_timer"/>
-      </node>
-      <node id="4">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>tidalField</label>
-        <link refid="classtidal_field"/>
-        <childnode refid="2" relation="public-inheritance">
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/tidalField.H" line="17" column="1" bodyfile="/home/weinberg/Projects/EXP/src/tidalField.H" bodystart="18" bodyend="37"/>
-    <listofallmembers>
-      <member refid="class_pot_accel_1a6a637997f73ca85ce78d8c92eec7ad1b" prot="public" virt="non-virtual"><scope>tidalField</scope><name>atol</name></member>
-      <member refid="class_pot_accel_1afa2cd3b0bf51e23d8bfc54aac73ef010" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>cC</name></member>
-      <member refid="class_pot_accel_1a630b9cdcae4ed4915cc72179fe9821c6" prot="public" virt="non-virtual"><scope>tidalField</scope><name>cc_lock</name></member>
-      <member refid="class_pot_accel_1a944213bbf31fca1508ba817e392b9fc6" prot="public" virt="non-virtual"><scope>tidalField</scope><name>ClearExternal</name></member>
-      <member refid="class_pot_accel_1ac7ab5e578b5b2bbd29fe35738b03d771" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>coef_dump</name></member>
-      <member refid="class_pot_accel_1aa6d9bde455e08dc9fead4f152357cb15" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>component</name></member>
-      <member refid="class_pot_accel_1a49e2936503ffdad1dd86d3f0c934d25a" prot="public" virt="non-virtual"><scope>tidalField</scope><name>compute</name></member>
-      <member refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>conf</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda489785884cf0770efb348b919878bf23" prot="public" virt="non-virtual"><scope>tidalField</scope><name>cube</name></member>
-      <member refid="class_pot_accel_1ac4def6f1c9318d8b49e62a4c9f2d6786" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>cuda_aware</name></member>
-      <member refid="class_pot_accel_1a5029810ccad93845aab9919e005bafe0" prot="public" virt="non-virtual"><scope>tidalField</scope><name>cudaAware</name></member>
-      <member refid="class_pot_accel_1a823dbb4c07cab1541d7ee738c6baef99" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>current_keys</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fdac215da2d633c31e7278fb1a3dd6af268" prot="public" virt="non-virtual"><scope>tidalField</scope><name>cylinder</name></member>
-      <member refid="class_external_force_1a867ae9794c9b543385020b748b4a843c" prot="protected" virt="virtual"><scope>tidalField</scope><name>determine_acceleration_and_potential</name></member>
-      <member refid="classtidal_field_1a0611f1ed21d4c7ae731957a1ca204c0c" prot="private" virt="virtual"><scope>tidalField</scope><name>determine_acceleration_and_potential_thread</name></member>
-      <member refid="class_external_force_1a289f6465cc44b742f7b202c9827ea0d9" prot="private" virt="virtual"><scope>tidalField</scope><name>determine_coefficients</name></member>
-      <member refid="class_pot_accel_1a3a9722c6b123ba2a0dd3671dec6cf724" prot="public" virt="virtual" ambiguityscope="PotAccel::"><scope>tidalField</scope><name>determine_coefficients</name></member>
-      <member refid="class_external_force_1ad7749fd6dc7d2a6090342719d517e029" prot="private" virt="virtual"><scope>tidalField</scope><name>determine_coefficients_thread</name></member>
-      <member refid="class_pot_accel_1a6a9ec23d29b553c1625bd8e88fe7692d" prot="public" virt="non-virtual"><scope>tidalField</scope><name>dof</name></member>
-      <member refid="class_pot_accel_1a10f4dd971b1a056bb6dacf01f2e2bcbf" prot="public" virt="virtual"><scope>tidalField</scope><name>dump_coefs</name></member>
-      <member refid="class_pot_accel_1ac53a3ab4bdfa2be33fbe4286b939230c" prot="public" virt="virtual"><scope>tidalField</scope><name>dump_coefs_h5</name></member>
-      <member refid="class_pot_accel_1abee9651463af53460b622250d311329e" prot="public" virt="non-virtual"><scope>tidalField</scope><name>exp_thread_fork</name></member>
-      <member refid="class_external_force_1a05aa158b28c4bb8665bb07f23a98e234" prot="public" virt="non-virtual"><scope>tidalField</scope><name>ExternalForce</name></member>
-      <member refid="class_external_force_1a3ab7afbf87f6bbc2338ef6f61265b16f" prot="public" virt="virtual"><scope>tidalField</scope><name>finish</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fd" prot="public" virt="non-virtual"><scope>tidalField</scope><name>Geometry</name></member>
-      <member refid="class_pot_accel_1adb6ef0bdae7d3520ca1f9fd8a6d648ea" prot="public" virt="non-virtual"><scope>tidalField</scope><name>geometry</name></member>
-      <member refid="class_pot_accel_1ade38f6ecdf80f80cde847d463b14909b" prot="public" virt="non-virtual"><scope>tidalField</scope><name>geoname</name></member>
-      <member refid="class_external_force_1a0d4186a622ace64c9881fd231cf165c6" prot="public" virt="virtual"><scope>tidalField</scope><name>get_acceleration_and_potential</name></member>
-      <member refid="class_pot_accel_1a0998c361bca277b3bba95f59acaba203" prot="public" virt="virtual"><scope>tidalField</scope><name>getScale</name></member>
-      <member refid="class_pot_accel_1a4a812594dff363f07bf57d69a60e4a13" prot="public" virt="non-virtual"><scope>tidalField</scope><name>HaveCoefDump</name></member>
-      <member refid="classtidal_field_1adf3d4a7a4b92b82838c9822f4f52ef19" prot="private" virt="non-virtual"><scope>tidalField</scope><name>hills_omega</name></member>
-      <member refid="classtidal_field_1a890474264063549c7093a7da03a218ac" prot="private" virt="non-virtual"><scope>tidalField</scope><name>hills_p</name></member>
-      <member refid="class_external_force_1a19f77a4862205b82b4e3bb126880ad6e" prot="public" virt="non-virtual"><scope>tidalField</scope><name>id</name></member>
-      <member refid="classtidal_field_1a5dbcac9de363aea682f1dd910be51c02" prot="private" virt="virtual"><scope>tidalField</scope><name>initialize</name></member>
-      <member refid="class_pot_accel_1a706b04f03c8beb4369dd125406770116" prot="public" virt="non-virtual"><scope>tidalField</scope><name>kill_mutex</name></member>
-      <member refid="class_pot_accel_1a65fa890eea987e18d552825ab074939b" prot="public" virt="non-virtual"><scope>tidalField</scope><name>make_mutex</name></member>
-      <member refid="class_pot_accel_1ad9ff6c9f431ad2f8ad2e5895c222ede8" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>mlevel</name></member>
-      <member refid="class_pot_accel_1a2ba58ca0219d337b13c87697353d4121" prot="public" virt="virtual"><scope>tidalField</scope><name>multistep_debug</name></member>
-      <member refid="class_pot_accel_1aaada1d8e8970e63332269b0d00aed97f" prot="public" virt="virtual"><scope>tidalField</scope><name>multistep_reset</name></member>
-      <member refid="class_pot_accel_1aa6c3661783144fd643ebaf1a2fa6278a" prot="public" virt="virtual"><scope>tidalField</scope><name>multistep_update</name></member>
-      <member refid="class_pot_accel_1a0e720b605350a9fb4e0d24dae2a1c381" prot="public" virt="virtual"><scope>tidalField</scope><name>multistep_update_begin</name></member>
-      <member refid="class_pot_accel_1acb0c9d88466949f2bf84da42439f2a1e" prot="public" virt="virtual"><scope>tidalField</scope><name>multistep_update_finish</name></member>
-      <member refid="class_pot_accel_1a73976f361ed7abf13001835bfcdee639" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>nbodies</name></member>
-      <member refid="class_pot_accel_1a4f2099b1b705731b909e63c90ea59f04" prot="public" virt="non-virtual"><scope>tidalField</scope><name>NoCoefs</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda7c49f38007dad33fb1e48fdebdd2f8c1" prot="public" virt="non-virtual"><scope>tidalField</scope><name>other</name></member>
-      <member refid="class_pot_accel_1a74b41dd5c2f102dd3184ac53b6172462" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>play_back</name></member>
-      <member refid="class_pot_accel_1aea1c756cd9616a1daf73541780b45798" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>play_cnew</name></member>
-      <member refid="class_pot_accel_1a801fdbd01e551033e79f274e4a7c1d1e" prot="public" virt="non-virtual"><scope>tidalField</scope><name>PotAccel</name></member>
-      <member refid="class_external_force_1a67ec1347079ac96a23e4b850857c5a53" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>print_divider</name></member>
-      <member refid="class_pot_accel_1a5e257d38dbf5c3d9630906a96abf6915" prot="public" virt="non-virtual"><scope>tidalField</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a37a3c348c0febbf70ff94949071c3beb" prot="public" virt="non-virtual"><scope>tidalField</scope><name>print_timings</name></member>
-      <member refid="class_pot_accel_1a8aea0d1740bf7432e1193dda7121a8bb" prot="public" virt="virtual"><scope>tidalField</scope><name>RegisterComponent</name></member>
-      <member refid="class_pot_accel_1added387424e4e4d23bac8500822e4324" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>scale</name></member>
-      <member refid="class_pot_accel_1ac65dfca720c42ea4a773024d1eaf977f" prot="public" virt="virtual"><scope>tidalField</scope><name>set_multistep_level</name></member>
-      <member refid="class_pot_accel_1a6dc784a141afdec5f4daad63eba20b81" prot="public" virt="non-virtual"><scope>tidalField</scope><name>SetExternal</name></member>
-      <member refid="class_pot_accel_1ad528efbd280a21543addaf7747e9089a" prot="public" virt="virtual"><scope>tidalField</scope><name>setScale</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda0a1acd8c0d6e745fb0ae3e33e458a9b8" prot="public" virt="non-virtual"><scope>tidalField</scope><name>slab</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda996ce4577548b6da6b1330a78b1c6f6a" prot="public" virt="non-virtual"><scope>tidalField</scope><name>sphere</name></member>
-      <member refid="class_pot_accel_1aff158a74d7328a080ed619c1456836f5" prot="private" virt="non-virtual"><scope>tidalField</scope><name>t</name></member>
-      <member refid="class_pot_accel_1ad55d9279ca0e8318bfe1a95d1c7566fda1792d3c00a41ee78957c83611fd368a2" prot="public" virt="non-virtual"><scope>tidalField</scope><name>table</name></member>
-      <member refid="class_pot_accel_1a125d7343a34d292a3e4a48a5d984cac4" prot="private" virt="non-virtual"><scope>tidalField</scope><name>td</name></member>
-      <member refid="class_pot_accel_1a86d0d012a44e2eb7c3e385d852a5fdde" prot="public" virt="non-virtual"><scope>tidalField</scope><name>thread_timing_beg</name></member>
-      <member refid="class_pot_accel_1a76c805cd8d0d134d37929eeb48115b33" prot="public" virt="non-virtual"><scope>tidalField</scope><name>thread_timing_end</name></member>
-      <member refid="classtidal_field_1acef78f19075d1f0a30d542aca9889c1d" prot="public" virt="non-virtual"><scope>tidalField</scope><name>tidalField</name></member>
-      <member refid="class_pot_accel_1a4315e73a641c54eefc548b7d14cb06b6" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>timer_list</name></member>
-      <member refid="class_pot_accel_1aabce5ff868883c6191b8b7f8f6281c04" prot="public" virt="non-virtual"><scope>tidalField</scope><name>TList</name></member>
-      <member refid="class_pot_accel_1a0355cfe43cdde5237f7be234e94de64b" prot="public" virt="non-virtual"><scope>tidalField</scope><name>unmatched</name></member>
-      <member refid="class_pot_accel_1acd32c6464b705469911df718114187b9" prot="public" virt="non-virtual"><scope>tidalField</scope><name>use</name></member>
-      <member refid="class_pot_accel_1a59a4a86ea8d2b3a9a5d420ef7e712697" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>use_external</name></member>
-      <member refid="class_pot_accel_1ae2e0dbf849707704a3d42a1fa91ce060" prot="public" virt="non-virtual"><scope>tidalField</scope><name>Used</name></member>
-      <member refid="class_pot_accel_1a8fe5beef77e790f0d7bf6f455f5bf1d3" prot="protected" virt="non-virtual"><scope>tidalField</scope><name>used</name></member>
-      <member refid="classtidal_field_1a9616a013c9640bf1ae68c5831d0bf358" prot="private" virt="non-virtual"><scope>tidalField</scope><name>valid_keys</name></member>
-      <member refid="class_external_force_1a18d27a313558c1ca3a536121571fe9ec" prot="public" virt="virtual"><scope>tidalField</scope><name>~ExternalForce</name></member>
-      <member refid="class_pot_accel_1adcc326688bb152249f81e88d6edfde62" prot="public" virt="virtual"><scope>tidalField</scope><name>~PotAccel</name></member>
-      <member refid="classtidal_field_1ab816612a12c9fbd164d2f46e6f507a21" prot="public" virt="virtual"><scope>tidalField</scope><name>~tidalField</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/combine.xslt b/doxyxml/combine.xslt
deleted file mode 100644
index 3bfa82c..0000000
--- a/doxyxml/combine.xslt
+++ /dev/null
@@ -1,15 +0,0 @@
-<!-- XSLT script to combine the generated output into a single file. 
-     If you have xsltproc you could use:
-     xsltproc combine.xslt index.xml >all.xml
--->
-<xsl:stylesheet xmlns:xsl="http://www.w3.org/1999/XSL/Transform" version="1.0">
-  <xsl:output method="xml" version="1.0" indent="no" standalone="yes" />
-  <xsl:template match="/">
-    <doxygen version="{doxygenindex/@version}" xml:lang="{doxygenindex/@xml:lang}">
-      <!-- Load all doxygen generated xml files -->
-      <xsl:for-each select="doxygenindex/compound">
-        <xsl:copy-of select="document( concat( @refid, '.xml' ) )/doxygen/*" />
-      </xsl:for-each>
-    </doxygen>
-  </xsl:template>
-</xsl:stylesheet>
diff --git a/doxyxml/compound.xsd b/doxyxml/compound.xsd
deleted file mode 100644
index e3cf2e5..0000000
--- a/doxyxml/compound.xsd
+++ /dev/null
@@ -1,1635 +0,0 @@
-<?xml version='1.0' encoding='utf-8' ?>
-<xsd:schema xmlns:xsd="http://www.w3.org/2001/XMLSchema">
-  <xsd:import namespace="http://www.w3.org/XML/1998/namespace" schemaLocation="xml.xsd"/>
-
-  <xsd:element name="doxygen" type="DoxygenType"/>
-
-  <!-- Complex types -->
-
-  <xsd:complexType name="DoxygenType">
-    <xsd:sequence maxOccurs="unbounded">
-      <xsd:element name="compounddef" type="compounddefType" minOccurs="0" />
-    </xsd:sequence>
-    <xsd:attribute name="version" type="DoxVersionNumber" use="required" />
-    <xsd:attribute ref="xml:lang" use="required"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="compounddefType">
-    <xsd:sequence>
-      <xsd:element name="compoundname" type="xsd:string"/>
-      <xsd:element name="title" type="xsd:string" minOccurs="0" />
-      <xsd:element name="basecompoundref" type="compoundRefType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="derivedcompoundref" type="compoundRefType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="includes" type="incType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="includedby" type="incType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="incdepgraph" type="graphType" minOccurs="0" />
-      <xsd:element name="invincdepgraph" type="graphType" minOccurs="0" />
-      <xsd:element name="innermodule" type="refType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="innerdir" type="refType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="innerfile" type="refType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="innerclass" type="refType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="innerconcept" type="refType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="innernamespace" type="refType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="innerpage" type="refType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="innergroup" type="refType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="qualifier" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="templateparamlist" type="templateparamlistType" minOccurs="0" />
-      <xsd:element name="sectiondef" type="sectiondefType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="tableofcontents" type="tableofcontentsType" minOccurs="0" maxOccurs="1" />
-      <xsd:element name="requiresclause" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
-      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
-      <xsd:element name="exports" type="exportsType" minOccurs="0" maxOccurs="1"/>
-      <xsd:element name="inheritancegraph" type="graphType" minOccurs="0" />
-      <xsd:element name="collaborationgraph" type="graphType" minOccurs="0" />
-      <xsd:element name="programlisting" type="listingType" minOccurs="0" />
-      <xsd:element name="location" type="locationType" minOccurs="0" />
-      <xsd:element name="listofallmembers" type="listofallmembersType" minOccurs="0" />
-    </xsd:sequence>
-    <xsd:attribute name="id" type="xsd:string" />
-    <xsd:attribute name="kind" type="DoxCompoundKind" />
-    <xsd:attribute name="language" type="DoxLanguage" use="optional"/>
-    <xsd:attribute name="prot" type="DoxProtectionKind" />
-    <xsd:attribute name="final" type="DoxBool" use="optional"/>
-    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
-    <xsd:attribute name="sealed" type="DoxBool" use="optional"/>
-    <xsd:attribute name="abstract" type="DoxBool" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="listofallmembersType">
-    <xsd:sequence>
-      <xsd:element name="member" type="memberRefType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="memberRefType">
-    <xsd:sequence>
-      <xsd:element name="scope" />
-      <xsd:element name="name" />
-    </xsd:sequence>
-    <xsd:attribute name="refid" type="xsd:string" />
-    <xsd:attribute name="prot" type="DoxProtectionKind" />
-    <xsd:attribute name="virt" type="DoxVirtualKind" />
-    <xsd:attribute name="ambiguityscope" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docHtmlOnlyType">
-    <xsd:simpleContent>
-      <xsd:extension base="xsd:string">
-        <xsd:attribute name="block" type="xsd:string" />
-      </xsd:extension>
-    </xsd:simpleContent>
-  </xsd:complexType>
-
-  <xsd:complexType name="compoundRefType">
-    <xsd:simpleContent>
-      <xsd:extension base="xsd:string">
-        <xsd:attribute name="refid" type="xsd:string" use="optional" />
-        <xsd:attribute name="prot" type="DoxProtectionKind" />
-        <xsd:attribute name="virt" type="DoxVirtualKind" />
-      </xsd:extension>
-    </xsd:simpleContent>
-  </xsd:complexType>
-
-  <xsd:complexType name="reimplementType">
-    <xsd:simpleContent>
-      <xsd:extension base="xsd:string">
-        <xsd:attribute name="refid" type="xsd:string" />
-      </xsd:extension>
-    </xsd:simpleContent>
-  </xsd:complexType>
-
-  <xsd:complexType name="incType">
-    <xsd:simpleContent>
-      <xsd:extension base="xsd:string">
-        <xsd:attribute name="refid" type="xsd:string" use="optional" />
-        <xsd:attribute name="local" type="DoxBool" />
-      </xsd:extension>
-    </xsd:simpleContent>
-  </xsd:complexType>
-
-  <xsd:complexType name="exportsType">
-    <xsd:sequence>
-      <xsd:element name="export" type="exportType" maxOccurs="unbounded"/>
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="exportType">
-    <xsd:simpleContent>
-      <xsd:extension base="xsd:string">
-        <xsd:attribute name="refid" type="xsd:string" use="optional" />
-      </xsd:extension>
-    </xsd:simpleContent>
-  </xsd:complexType>
-
-  <xsd:complexType name="refType">
-    <xsd:simpleContent>
-      <xsd:extension base="xsd:string">
-        <xsd:attribute name="refid" type="xsd:string" />
-        <xsd:attribute name="prot" type="DoxProtectionKind" use="optional"/>
-        <xsd:attribute name="inline" type="DoxBool" use="optional"/>
-      </xsd:extension>
-    </xsd:simpleContent>
-  </xsd:complexType>
-
-  <xsd:complexType name="refTextType">
-    <xsd:simpleContent>
-      <xsd:extension base="xsd:string">
-       <xsd:attribute name="refid" type="xsd:string" />
-       <xsd:attribute name="kindref" type="DoxRefKind" />
-       <xsd:attribute name="external" type="xsd:string" use="optional"/>
-       <xsd:attribute name="tooltip" type="xsd:string" use="optional"/>
-      </xsd:extension>
-    </xsd:simpleContent>
-  </xsd:complexType>
-
-  <xsd:simpleType name="MemberKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="define"/>
-      <xsd:enumeration value="property"/>
-      <xsd:enumeration value="event"/>
-      <xsd:enumeration value="variable"/>
-      <xsd:enumeration value="typedef"/>
-      <xsd:enumeration value="enum"/>
-      <xsd:enumeration value="enumvalue"/>
-      <xsd:enumeration value="function"/>
-      <xsd:enumeration value="signal"/>
-      <xsd:enumeration value="prototype"/>
-      <xsd:enumeration value="friend"/>
-      <xsd:enumeration value="dcop"/>
-      <xsd:enumeration value="slot"/>
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:complexType name="MemberType">
-    <xsd:sequence>
-      <xsd:element name="name" type="xsd:string"/>
-    </xsd:sequence>
-    <xsd:attribute name="refid" type="xsd:string" use="required"/>
-    <xsd:attribute name="kind" type="MemberKind" use="required"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="sectiondefType">
-    <xsd:sequence>
-      <xsd:element name="header" type="xsd:string" minOccurs="0" />
-      <xsd:element name="description" type="descriptionType" minOccurs="0" />
-      <xsd:element name="memberdef" type="memberdefType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="member" type="MemberType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="kind" type="DoxSectionKind" />
-  </xsd:complexType>
-
-  <xsd:complexType name="memberdefType">
-    <xsd:sequence>
-      <xsd:element name="templateparamlist" type="templateparamlistType" minOccurs="0" />
-      <xsd:element name="type" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="definition" minOccurs="0" />
-      <xsd:element name="argsstring" minOccurs="0" />
-      <xsd:element name="name" />
-      <xsd:element name="qualifiedname" minOccurs="0"/>
-      <xsd:element name="read" minOccurs="0" />
-      <xsd:element name="write" minOccurs="0" />
-      <xsd:element name="bitfield" minOccurs="0" />
-      <xsd:element name="reimplements" type="reimplementType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="reimplementedby" type="reimplementType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="qualifier" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="param" type="paramType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="enumvalue" type="enumvalueType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="requiresclause" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="exceptions" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
-      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
-      <xsd:element name="inbodydescription" type="descriptionType" minOccurs="0" />
-      <xsd:element name="location" type="locationType" />
-      <xsd:element name="references" type="referenceType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="referencedby" type="referenceType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="kind" type="DoxMemberKind" />
-    <xsd:attribute name="id" type="xsd:string" />
-    <xsd:attribute name="prot" type="DoxProtectionKind" />
-    <xsd:attribute name="static" type="DoxBool" />
-    <xsd:attribute name="extern" type="DoxBool" use="optional" />
-    <xsd:attribute name="strong" type="DoxBool" use="optional"/>
-    <xsd:attribute name="const" type="DoxBool" use="optional"/>
-    <xsd:attribute name="explicit" type="DoxBool" use="optional"/>
-    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
-    <xsd:attribute name="refqual" type="DoxRefQualifierKind" use="optional"/>
-    <xsd:attribute name="virt" type="DoxVirtualKind" use="optional"/>
-    <xsd:attribute name="volatile" type="DoxBool" use="optional"/>
-    <xsd:attribute name="mutable" type="DoxBool" use="optional"/>
-    <xsd:attribute name="noexcept" type="DoxBool" use="optional"/>
-    <xsd:attribute name="constexpr" type="DoxBool" use="optional"/>
-    <!-- Qt property -->
-    <xsd:attribute name="readable" type="DoxBool" use="optional"/>
-    <xsd:attribute name="writable" type="DoxBool" use="optional"/>
-    <!-- C++/CLI variable -->
-    <xsd:attribute name="initonly" type="DoxBool" use="optional"/>
-    <!-- C++/CLI and C# property -->
-    <xsd:attribute name="settable" type="DoxBool" use="optional"/>
-    <xsd:attribute name="privatesettable" type="DoxBool" use="optional"/>
-    <xsd:attribute name="protectedsettable" type="DoxBool" use="optional"/>
-    <xsd:attribute name="gettable" type="DoxBool" use="optional"/>
-    <xsd:attribute name="privategettable" type="DoxBool" use="optional"/>
-    <xsd:attribute name="protectedgettable" type="DoxBool" use="optional"/>
-    <!-- C++/CLI function -->
-    <xsd:attribute name="final" type="DoxBool" use="optional"/>
-    <xsd:attribute name="sealed" type="DoxBool" use="optional"/>
-    <xsd:attribute name="new" type="DoxBool" use="optional"/>
-    <!-- C++/CLI event -->
-    <xsd:attribute name="add" type="DoxBool" use="optional"/>
-    <xsd:attribute name="remove" type="DoxBool" use="optional"/>
-    <xsd:attribute name="raise" type="DoxBool" use="optional"/>
-    <!-- Objective-C 2.0 protocol method -->
-    <xsd:attribute name="optional" type="DoxBool" use="optional"/>
-    <xsd:attribute name="required" type="DoxBool" use="optional"/>
-    <!-- Objective-C 2.0 property accessor -->
-    <xsd:attribute name="accessor" type="DoxAccessor" use="optional"/>
-    <!-- UNO IDL -->
-    <xsd:attribute name="attribute" type="DoxBool" use="optional"/>
-    <xsd:attribute name="property" type="DoxBool" use="optional"/>
-    <xsd:attribute name="readonly" type="DoxBool" use="optional"/>
-    <xsd:attribute name="bound" type="DoxBool" use="optional"/>
-    <xsd:attribute name="removable" type="DoxBool" use="optional"/>
-    <xsd:attribute name="constrained" type="DoxBool" use="optional"/>
-    <xsd:attribute name="transient" type="DoxBool" use="optional"/>
-    <xsd:attribute name="maybevoid" type="DoxBool" use="optional"/>
-    <xsd:attribute name="maybedefault" type="DoxBool" use="optional"/>
-    <xsd:attribute name="maybeambiguous" type="DoxBool" use="optional"/>
-
-  </xsd:complexType>
-
-  <xsd:complexType name="descriptionType" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="title" type="xsd:string" minOccurs="0"/>	    
-      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="internal" type="docInternalType" minOccurs="0" maxOccurs="unbounded"/>
-      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="enumvalueType">
-    <xsd:sequence>
-      <xsd:element name="name" />
-      <xsd:element name="initializer" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
-      <xsd:element name="detaileddescription" type="descriptionType" minOccurs="0" />
-    </xsd:sequence>
-    <xsd:attribute name="id" type="xsd:string" />
-    <xsd:attribute name="prot" type="DoxProtectionKind" />
-  </xsd:complexType>
-
-  <xsd:complexType name="templateparamlistType">
-    <xsd:sequence>
-      <xsd:element name="param" type="paramType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="paramType">
-    <xsd:sequence>
-      <xsd:element name="attributes" minOccurs="0" />
-      <xsd:element name="type" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="declname" minOccurs="0" />
-      <xsd:element name="defname" minOccurs="0" />
-      <xsd:element name="array" minOccurs="0" />
-      <xsd:element name="defval" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="typeconstraint" type="linkedTextType" minOccurs="0" />
-      <xsd:element name="briefdescription" type="descriptionType" minOccurs="0" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="linkedTextType" mixed="true">
-    <xsd:sequence>
-    <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="graphType">
-    <xsd:sequence>
-      <xsd:element name="node" type="nodeType" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="nodeType">
-    <xsd:sequence>
-      <xsd:element name="label" />
-      <xsd:element name="link" type="linkType" minOccurs="0" />
-      <xsd:element name="childnode" type="childnodeType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="id" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="childnodeType">
-    <xsd:sequence>
-      <xsd:element name="edgelabel" minOccurs="0" maxOccurs="unbounded"/>
-    </xsd:sequence>
-    <xsd:attribute name="refid" type="xsd:string" />
-    <xsd:attribute name="relation" type="DoxGraphRelation" />
-  </xsd:complexType>
-
-  <xsd:complexType name="linkType">
-    <xsd:attribute name="refid" type="xsd:string" />
-    <xsd:attribute name="external" type="xsd:string" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="listingType">
-    <xsd:sequence>
-      <xsd:element name="codeline" type="codelineType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="filename" type="xsd:string" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="codelineType">
-    <xsd:sequence>
-      <xsd:element name="highlight" type="highlightType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="lineno" type="xsd:integer" />
-    <xsd:attribute name="refid" type="xsd:string" />
-    <xsd:attribute name="refkind" type="DoxRefKind" />
-    <xsd:attribute name="external" type="DoxBool" />
-  </xsd:complexType>
-
-  <xsd:complexType name="highlightType" mixed="true">
-    <xsd:choice minOccurs="0" maxOccurs="unbounded">
-      <xsd:element name="sp" type="spType" />
-      <xsd:element name="ref" type="refTextType" />
-    </xsd:choice>
-    <xsd:attribute name="class" type="DoxHighlightClass" />
-  </xsd:complexType>
-
-  <xsd:complexType name="spType" mixed="true">
-    <xsd:attribute name="value" type="xsd:integer" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="referenceType" mixed="true">
-    <xsd:attribute name="refid" type="xsd:string" />
-    <xsd:attribute name="compoundref" type="xsd:string" use="optional" />
-    <xsd:attribute name="startline" type="xsd:integer" />
-    <xsd:attribute name="endline" type="xsd:integer" />
-  </xsd:complexType>
-
-  <xsd:complexType name="locationType">
-    <xsd:attribute name="file" type="xsd:string" />
-    <xsd:attribute name="line" type="xsd:integer" />
-    <xsd:attribute name="column" type="xsd:integer" use="optional"/>
-    <xsd:attribute name="declfile" type="xsd:string" use="optional"/>
-    <xsd:attribute name="declline" type="xsd:integer" use="optional"/>
-    <xsd:attribute name="declcolumn" type="xsd:integer" use="optional"/>
-    <xsd:attribute name="bodyfile" type="xsd:string" />
-    <xsd:attribute name="bodystart" type="xsd:integer" />
-    <xsd:attribute name="bodyend" type="xsd:integer" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docSect1Type" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="title" type="xsd:string" minOccurs="0" />
-      <xsd:choice maxOccurs="unbounded">
-        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-        <xsd:element name="internal" type="docInternalS1Type" minOccurs="0"  maxOccurs="unbounded" />
-        <xsd:element name="sect2" type="docSect2Type" minOccurs="0" maxOccurs="unbounded" />
-      </xsd:choice>
-    </xsd:sequence>
-    <xsd:attribute name="id" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docSect2Type" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="title" type="xsd:string" />
-      <xsd:choice maxOccurs="unbounded">
-        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-        <xsd:element name="sect3" type="docSect3Type" minOccurs="0" maxOccurs="unbounded" />
-        <xsd:element name="internal" type="docInternalS2Type" minOccurs="0" />
-      </xsd:choice>
-    </xsd:sequence>
-    <xsd:attribute name="id" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docSect3Type" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="title" type="xsd:string" />
-      <xsd:choice maxOccurs="unbounded">
-        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-        <xsd:element name="sect4" type="docSect4Type" minOccurs="0" maxOccurs="unbounded" />
-        <xsd:element name="internal" type="docInternalS3Type" minOccurs="0" />
-      </xsd:choice>
-    </xsd:sequence>
-    <xsd:attribute name="id" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docSect4Type" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="title" type="xsd:string" />
-      <xsd:choice maxOccurs="unbounded">
-        <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-        <xsd:element name="internal" type="docInternalS4Type" minOccurs="0" />
-      </xsd:choice>
-    </xsd:sequence>
-    <xsd:attribute name="id" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docInternalType" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docInternalS1Type" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="sect2" type="docSect2Type" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docInternalS2Type" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="sect3" type="docSect3Type" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docInternalS3Type" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="sect3" type="docSect4Type" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docInternalS4Type" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="para"  type="docParaType"  minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
- 
-  <xsd:group name="docTitleCmdGroup">
-    <xsd:choice>
-      <xsd:element name="ulink" type="docURLLink" />
-      <xsd:element name="bold" type="docMarkupType" />
-      <xsd:element name="s" type="docMarkupType" />
-      <xsd:element name="strike" type="docMarkupType" />
-      <xsd:element name="underline" type="docMarkupType" />
-      <xsd:element name="emphasis" type="docMarkupType" />
-      <xsd:element name="computeroutput" type="docMarkupType" />
-      <xsd:element name="subscript" type="docMarkupType" />
-      <xsd:element name="superscript" type="docMarkupType" />
-      <xsd:element name="center" type="docMarkupType" />
-      <xsd:element name="small" type="docMarkupType" />
-      <xsd:element name="cite" type="docMarkupType" />
-      <xsd:element name="del" type="docMarkupType" />
-      <xsd:element name="ins" type="docMarkupType" />
-      <xsd:element name="htmlonly" type="docHtmlOnlyType" />
-      <xsd:element name="manonly" type="xsd:string" />
-      <xsd:element name="xmlonly" type="xsd:string" />
-      <xsd:element name="rtfonly" type="xsd:string" />
-      <xsd:element name="latexonly" type="xsd:string" />
-      <xsd:element name="docbookonly" type="xsd:string" />
-      <xsd:element name="image" type="docImageType" />
-      <xsd:element name="dot" type="docDotMscType" />
-      <xsd:element name="msc" type="docDotMscType" />
-      <xsd:element name="plantuml" type="docPlantumlType" />
-      <xsd:element name="anchor" type="docAnchorType" />
-      <xsd:element name="formula" type="docFormulaType" />
-      <xsd:element name="ref" type="docRefTextType" />
-      <xsd:element name="emoji" type="docEmojiType" />
-      <xsd:element name="linebreak" type="docEmptyType" />
-      <xsd:element name="nonbreakablespace" type="docEmptyType" />
-      <xsd:element name="iexcl" type="docEmptyType" />
-      <xsd:element name="cent" type="docEmptyType" />
-      <xsd:element name="pound" type="docEmptyType" />
-      <xsd:element name="curren" type="docEmptyType" />
-      <xsd:element name="yen" type="docEmptyType" />
-      <xsd:element name="brvbar" type="docEmptyType" />
-      <xsd:element name="sect" type="docEmptyType" />
-      <xsd:element name="umlaut" type="docEmptyType" />
-      <xsd:element name="copy" type="docEmptyType" />
-      <xsd:element name="ordf" type="docEmptyType" />
-      <xsd:element name="laquo" type="docEmptyType" />
-      <xsd:element name="not" type="docEmptyType" />
-      <xsd:element name="shy" type="docEmptyType" />
-      <xsd:element name="registered" type="docEmptyType" />
-      <xsd:element name="macr" type="docEmptyType" />
-      <xsd:element name="deg" type="docEmptyType" />
-      <xsd:element name="plusmn" type="docEmptyType" />
-      <xsd:element name="sup2" type="docEmptyType" />
-      <xsd:element name="sup3" type="docEmptyType" />
-      <xsd:element name="acute" type="docEmptyType" />
-      <xsd:element name="micro" type="docEmptyType" />
-      <xsd:element name="para" type="docEmptyType" />
-      <xsd:element name="middot" type="docEmptyType" />
-      <xsd:element name="cedil" type="docEmptyType" />
-      <xsd:element name="sup1" type="docEmptyType" />
-      <xsd:element name="ordm" type="docEmptyType" />
-      <xsd:element name="raquo" type="docEmptyType" />
-      <xsd:element name="frac14" type="docEmptyType" />
-      <xsd:element name="frac12" type="docEmptyType" />
-      <xsd:element name="frac34" type="docEmptyType" />
-      <xsd:element name="iquest" type="docEmptyType" />
-      <xsd:element name="Agrave" type="docEmptyType" />
-      <xsd:element name="Aacute" type="docEmptyType" />
-      <xsd:element name="Acirc" type="docEmptyType" />
-      <xsd:element name="Atilde" type="docEmptyType" />
-      <xsd:element name="Aumlaut" type="docEmptyType" />
-      <xsd:element name="Aring" type="docEmptyType" />
-      <xsd:element name="AElig" type="docEmptyType" />
-      <xsd:element name="Ccedil" type="docEmptyType" />
-      <xsd:element name="Egrave" type="docEmptyType" />
-      <xsd:element name="Eacute" type="docEmptyType" />
-      <xsd:element name="Ecirc" type="docEmptyType" />
-      <xsd:element name="Eumlaut" type="docEmptyType" />
-      <xsd:element name="Igrave" type="docEmptyType" />
-      <xsd:element name="Iacute" type="docEmptyType" />
-      <xsd:element name="Icirc" type="docEmptyType" />
-      <xsd:element name="Iumlaut" type="docEmptyType" />
-      <xsd:element name="ETH" type="docEmptyType" />
-      <xsd:element name="Ntilde" type="docEmptyType" />
-      <xsd:element name="Ograve" type="docEmptyType" />
-      <xsd:element name="Oacute" type="docEmptyType" />
-      <xsd:element name="Ocirc" type="docEmptyType" />
-      <xsd:element name="Otilde" type="docEmptyType" />
-      <xsd:element name="Oumlaut" type="docEmptyType" />
-      <xsd:element name="times" type="docEmptyType" />
-      <xsd:element name="Oslash" type="docEmptyType" />
-      <xsd:element name="Ugrave" type="docEmptyType" />
-      <xsd:element name="Uacute" type="docEmptyType" />
-      <xsd:element name="Ucirc" type="docEmptyType" />
-      <xsd:element name="Uumlaut" type="docEmptyType" />
-      <xsd:element name="Yacute" type="docEmptyType" />
-      <xsd:element name="THORN" type="docEmptyType" />
-      <xsd:element name="szlig" type="docEmptyType" />
-      <xsd:element name="agrave" type="docEmptyType" />
-      <xsd:element name="aacute" type="docEmptyType" />
-      <xsd:element name="acirc" type="docEmptyType" />
-      <xsd:element name="atilde" type="docEmptyType" />
-      <xsd:element name="aumlaut" type="docEmptyType" />
-      <xsd:element name="aring" type="docEmptyType" />
-      <xsd:element name="aelig" type="docEmptyType" />
-      <xsd:element name="ccedil" type="docEmptyType" />
-      <xsd:element name="egrave" type="docEmptyType" />
-      <xsd:element name="eacute" type="docEmptyType" />
-      <xsd:element name="ecirc" type="docEmptyType" />
-      <xsd:element name="eumlaut" type="docEmptyType" />
-      <xsd:element name="igrave" type="docEmptyType" />
-      <xsd:element name="iacute" type="docEmptyType" />
-      <xsd:element name="icirc" type="docEmptyType" />
-      <xsd:element name="iumlaut" type="docEmptyType" />
-      <xsd:element name="eth" type="docEmptyType" />
-      <xsd:element name="ntilde" type="docEmptyType" />
-      <xsd:element name="ograve" type="docEmptyType" />
-      <xsd:element name="oacute" type="docEmptyType" />
-      <xsd:element name="ocirc" type="docEmptyType" />
-      <xsd:element name="otilde" type="docEmptyType" />
-      <xsd:element name="oumlaut" type="docEmptyType" />
-      <xsd:element name="divide" type="docEmptyType" />
-      <xsd:element name="oslash" type="docEmptyType" />
-      <xsd:element name="ugrave" type="docEmptyType" />
-      <xsd:element name="uacute" type="docEmptyType" />
-      <xsd:element name="ucirc" type="docEmptyType" />
-      <xsd:element name="uumlaut" type="docEmptyType" />
-      <xsd:element name="yacute" type="docEmptyType" />
-      <xsd:element name="thorn" type="docEmptyType" />
-      <xsd:element name="yumlaut" type="docEmptyType" />
-      <xsd:element name="fnof" type="docEmptyType" />
-      <xsd:element name="Alpha" type="docEmptyType" />
-      <xsd:element name="Beta" type="docEmptyType" />
-      <xsd:element name="Gamma" type="docEmptyType" />
-      <xsd:element name="Delta" type="docEmptyType" />
-      <xsd:element name="Epsilon" type="docEmptyType" />
-      <xsd:element name="Zeta" type="docEmptyType" />
-      <xsd:element name="Eta" type="docEmptyType" />
-      <xsd:element name="Theta" type="docEmptyType" />
-      <xsd:element name="Iota" type="docEmptyType" />
-      <xsd:element name="Kappa" type="docEmptyType" />
-      <xsd:element name="Lambda" type="docEmptyType" />
-      <xsd:element name="Mu" type="docEmptyType" />
-      <xsd:element name="Nu" type="docEmptyType" />
-      <xsd:element name="Xi" type="docEmptyType" />
-      <xsd:element name="Omicron" type="docEmptyType" />
-      <xsd:element name="Pi" type="docEmptyType" />
-      <xsd:element name="Rho" type="docEmptyType" />
-      <xsd:element name="Sigma" type="docEmptyType" />
-      <xsd:element name="Tau" type="docEmptyType" />
-      <xsd:element name="Upsilon" type="docEmptyType" />
-      <xsd:element name="Phi" type="docEmptyType" />
-      <xsd:element name="Chi" type="docEmptyType" />
-      <xsd:element name="Psi" type="docEmptyType" />
-      <xsd:element name="Omega" type="docEmptyType" />
-      <xsd:element name="alpha" type="docEmptyType" />
-      <xsd:element name="beta" type="docEmptyType" />
-      <xsd:element name="gamma" type="docEmptyType" />
-      <xsd:element name="delta" type="docEmptyType" />
-      <xsd:element name="epsilon" type="docEmptyType" />
-      <xsd:element name="zeta" type="docEmptyType" />
-      <xsd:element name="eta" type="docEmptyType" />
-      <xsd:element name="theta" type="docEmptyType" />
-      <xsd:element name="iota" type="docEmptyType" />
-      <xsd:element name="kappa" type="docEmptyType" />
-      <xsd:element name="lambda" type="docEmptyType" />
-      <xsd:element name="mu" type="docEmptyType" />
-      <xsd:element name="nu" type="docEmptyType" />
-      <xsd:element name="xi" type="docEmptyType" />
-      <xsd:element name="omicron" type="docEmptyType" />
-      <xsd:element name="pi" type="docEmptyType" />
-      <xsd:element name="rho" type="docEmptyType" />
-      <xsd:element name="sigmaf" type="docEmptyType" />
-      <xsd:element name="sigma" type="docEmptyType" />
-      <xsd:element name="tau" type="docEmptyType" />
-      <xsd:element name="upsilon" type="docEmptyType" />
-      <xsd:element name="phi" type="docEmptyType" />
-      <xsd:element name="chi" type="docEmptyType" />
-      <xsd:element name="psi" type="docEmptyType" />
-      <xsd:element name="omega" type="docEmptyType" />
-      <xsd:element name="thetasym" type="docEmptyType" />
-      <xsd:element name="upsih" type="docEmptyType" />
-      <xsd:element name="piv" type="docEmptyType" />
-      <xsd:element name="bull" type="docEmptyType" />
-      <xsd:element name="hellip" type="docEmptyType" />
-      <xsd:element name="prime" type="docEmptyType" />
-      <xsd:element name="Prime" type="docEmptyType" />
-      <xsd:element name="oline" type="docEmptyType" />
-      <xsd:element name="frasl" type="docEmptyType" />
-      <xsd:element name="weierp" type="docEmptyType" />
-      <xsd:element name="imaginary" type="docEmptyType" />
-      <xsd:element name="real" type="docEmptyType" />
-      <xsd:element name="trademark" type="docEmptyType" />
-      <xsd:element name="alefsym" type="docEmptyType" />
-      <xsd:element name="larr" type="docEmptyType" />
-      <xsd:element name="uarr" type="docEmptyType" />
-      <xsd:element name="rarr" type="docEmptyType" />
-      <xsd:element name="darr" type="docEmptyType" />
-      <xsd:element name="harr" type="docEmptyType" />
-      <xsd:element name="crarr" type="docEmptyType" />
-      <xsd:element name="lArr" type="docEmptyType" />
-      <xsd:element name="uArr" type="docEmptyType" />
-      <xsd:element name="rArr" type="docEmptyType" />
-      <xsd:element name="dArr" type="docEmptyType" />
-      <xsd:element name="hArr" type="docEmptyType" />
-      <xsd:element name="forall" type="docEmptyType" />
-      <xsd:element name="part" type="docEmptyType" />
-      <xsd:element name="exist" type="docEmptyType" />
-      <xsd:element name="empty" type="docEmptyType" />
-      <xsd:element name="nabla" type="docEmptyType" />
-      <xsd:element name="isin" type="docEmptyType" />
-      <xsd:element name="notin" type="docEmptyType" />
-      <xsd:element name="ni" type="docEmptyType" />
-      <xsd:element name="prod" type="docEmptyType" />
-      <xsd:element name="sum" type="docEmptyType" />
-      <xsd:element name="minus" type="docEmptyType" />
-      <xsd:element name="lowast" type="docEmptyType" />
-      <xsd:element name="radic" type="docEmptyType" />
-      <xsd:element name="prop" type="docEmptyType" />
-      <xsd:element name="infin" type="docEmptyType" />
-      <xsd:element name="ang" type="docEmptyType" />
-      <xsd:element name="and" type="docEmptyType" />
-      <xsd:element name="or" type="docEmptyType" />
-      <xsd:element name="cap" type="docEmptyType" />
-      <xsd:element name="cup" type="docEmptyType" />
-      <xsd:element name="int" type="docEmptyType" />
-      <xsd:element name="there4" type="docEmptyType" />
-      <xsd:element name="sim" type="docEmptyType" />
-      <xsd:element name="cong" type="docEmptyType" />
-      <xsd:element name="asymp" type="docEmptyType" />
-      <xsd:element name="ne" type="docEmptyType" />
-      <xsd:element name="equiv" type="docEmptyType" />
-      <xsd:element name="le" type="docEmptyType" />
-      <xsd:element name="ge" type="docEmptyType" />
-      <xsd:element name="sub" type="docEmptyType" />
-      <xsd:element name="sup" type="docEmptyType" />
-      <xsd:element name="nsub" type="docEmptyType" />
-      <xsd:element name="sube" type="docEmptyType" />
-      <xsd:element name="supe" type="docEmptyType" />
-      <xsd:element name="oplus" type="docEmptyType" />
-      <xsd:element name="otimes" type="docEmptyType" />
-      <xsd:element name="perp" type="docEmptyType" />
-      <xsd:element name="sdot" type="docEmptyType" />
-      <xsd:element name="lceil" type="docEmptyType" />
-      <xsd:element name="rceil" type="docEmptyType" />
-      <xsd:element name="lfloor" type="docEmptyType" />
-      <xsd:element name="rfloor" type="docEmptyType" />
-      <xsd:element name="lang" type="docEmptyType" />
-      <xsd:element name="rang" type="docEmptyType" />
-      <xsd:element name="loz" type="docEmptyType" />
-      <xsd:element name="spades" type="docEmptyType" />
-      <xsd:element name="clubs" type="docEmptyType" />
-      <xsd:element name="hearts" type="docEmptyType" />
-      <xsd:element name="diams" type="docEmptyType" />
-      <xsd:element name="OElig" type="docEmptyType" />
-      <xsd:element name="oelig" type="docEmptyType" />
-      <xsd:element name="Scaron" type="docEmptyType" />
-      <xsd:element name="scaron" type="docEmptyType" />
-      <xsd:element name="Yumlaut" type="docEmptyType" />
-      <xsd:element name="circ" type="docEmptyType" />
-      <xsd:element name="tilde" type="docEmptyType" />
-      <xsd:element name="ensp" type="docEmptyType" />
-      <xsd:element name="emsp" type="docEmptyType" />
-      <xsd:element name="thinsp" type="docEmptyType" />
-      <xsd:element name="zwnj" type="docEmptyType" />
-      <xsd:element name="zwj" type="docEmptyType" />
-      <xsd:element name="lrm" type="docEmptyType" />
-      <xsd:element name="rlm" type="docEmptyType" />
-      <xsd:element name="ndash" type="docEmptyType" />
-      <xsd:element name="mdash" type="docEmptyType" />
-      <xsd:element name="lsquo" type="docEmptyType" />
-      <xsd:element name="rsquo" type="docEmptyType" />
-      <xsd:element name="sbquo" type="docEmptyType" />
-      <xsd:element name="ldquo" type="docEmptyType" />
-      <xsd:element name="rdquo" type="docEmptyType" />
-      <xsd:element name="bdquo" type="docEmptyType" />
-      <xsd:element name="dagger" type="docEmptyType" />
-      <xsd:element name="Dagger" type="docEmptyType" />
-      <xsd:element name="permil" type="docEmptyType" />
-      <xsd:element name="lsaquo" type="docEmptyType" />
-      <xsd:element name="rsaquo" type="docEmptyType" />
-      <xsd:element name="euro" type="docEmptyType" />
-      <xsd:element name="tm" type="docEmptyType" />
-    </xsd:choice>
-  </xsd:group>
-
-  <xsd:complexType name="docTitleType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docSummaryType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-  </xsd:complexType>
-
-  <xsd:group name="docCmdGroup">
-    <xsd:choice>
-      <!-- start workaround for xsd.exe
-        <xsd:group ref="docTitleCmdGroup"/>
-      -->
-      <xsd:element name="ulink" type="docURLLink" />
-      <xsd:element name="bold" type="docMarkupType" />
-      <xsd:element name="s" type="docMarkupType" />
-      <xsd:element name="strike" type="docMarkupType" />
-      <xsd:element name="underline" type="docMarkupType" />
-      <xsd:element name="emphasis" type="docMarkupType" />
-      <xsd:element name="computeroutput" type="docMarkupType" />
-      <xsd:element name="subscript" type="docMarkupType" />
-      <xsd:element name="superscript" type="docMarkupType" />
-      <xsd:element name="center" type="docMarkupType" />
-      <xsd:element name="small" type="docMarkupType" />
-      <xsd:element name="cite" type="docMarkupType" />
-      <xsd:element name="del" type="docMarkupType" />
-      <xsd:element name="ins" type="docMarkupType" />
-      <xsd:element name="htmlonly" type="docHtmlOnlyType" />
-      <xsd:element name="manonly" type="xsd:string" />
-      <xsd:element name="xmlonly" type="xsd:string" />
-      <xsd:element name="rtfonly" type="xsd:string" />
-      <xsd:element name="latexonly" type="xsd:string" />
-      <xsd:element name="docbookonly" type="xsd:string" />
-      <xsd:element name="image" type="docImageType" />
-      <xsd:element name="dot" type="docDotMscType" />
-      <xsd:element name="msc" type="docDotMscType" />
-      <xsd:element name="plantuml" type="docPlantumlType" />
-      <xsd:element name="anchor" type="docAnchorType" />
-      <xsd:element name="formula" type="docFormulaType" />
-      <xsd:element name="ref" type="docRefTextType" />
-      <xsd:element name="emoji" type="docEmojiType" />
-      <xsd:element name="linebreak" type="docEmptyType" />
-      <xsd:element name="nonbreakablespace" type="docEmptyType" />
-      <xsd:element name="iexcl" type="docEmptyType" />
-      <xsd:element name="cent" type="docEmptyType" />
-      <xsd:element name="pound" type="docEmptyType" />
-      <xsd:element name="curren" type="docEmptyType" />
-      <xsd:element name="yen" type="docEmptyType" />
-      <xsd:element name="brvbar" type="docEmptyType" />
-      <xsd:element name="sect" type="docEmptyType" />
-      <xsd:element name="umlaut" type="docEmptyType" />
-      <xsd:element name="copy" type="docEmptyType" />
-      <xsd:element name="ordf" type="docEmptyType" />
-      <xsd:element name="laquo" type="docEmptyType" />
-      <xsd:element name="not" type="docEmptyType" />
-      <xsd:element name="shy" type="docEmptyType" />
-      <xsd:element name="registered" type="docEmptyType" />
-      <xsd:element name="macr" type="docEmptyType" />
-      <xsd:element name="deg" type="docEmptyType" />
-      <xsd:element name="plusmn" type="docEmptyType" />
-      <xsd:element name="sup2" type="docEmptyType" />
-      <xsd:element name="sup3" type="docEmptyType" />
-      <xsd:element name="acute" type="docEmptyType" />
-      <xsd:element name="micro" type="docEmptyType" />
-      <xsd:element name="para" type="docEmptyType" />
-      <xsd:element name="middot" type="docEmptyType" />
-      <xsd:element name="cedil" type="docEmptyType" />
-      <xsd:element name="sup1" type="docEmptyType" />
-      <xsd:element name="ordm" type="docEmptyType" />
-      <xsd:element name="raquo" type="docEmptyType" />
-      <xsd:element name="frac14" type="docEmptyType" />
-      <xsd:element name="frac12" type="docEmptyType" />
-      <xsd:element name="frac34" type="docEmptyType" />
-      <xsd:element name="iquest" type="docEmptyType" />
-      <xsd:element name="Agrave" type="docEmptyType" />
-      <xsd:element name="Aacute" type="docEmptyType" />
-      <xsd:element name="Acirc" type="docEmptyType" />
-      <xsd:element name="Atilde" type="docEmptyType" />
-      <xsd:element name="Aumlaut" type="docEmptyType" />
-      <xsd:element name="Aring" type="docEmptyType" />
-      <xsd:element name="AElig" type="docEmptyType" />
-      <xsd:element name="Ccedil" type="docEmptyType" />
-      <xsd:element name="Egrave" type="docEmptyType" />
-      <xsd:element name="Eacute" type="docEmptyType" />
-      <xsd:element name="Ecirc" type="docEmptyType" />
-      <xsd:element name="Eumlaut" type="docEmptyType" />
-      <xsd:element name="Igrave" type="docEmptyType" />
-      <xsd:element name="Iacute" type="docEmptyType" />
-      <xsd:element name="Icirc" type="docEmptyType" />
-      <xsd:element name="Iumlaut" type="docEmptyType" />
-      <xsd:element name="ETH" type="docEmptyType" />
-      <xsd:element name="Ntilde" type="docEmptyType" />
-      <xsd:element name="Ograve" type="docEmptyType" />
-      <xsd:element name="Oacute" type="docEmptyType" />
-      <xsd:element name="Ocirc" type="docEmptyType" />
-      <xsd:element name="Otilde" type="docEmptyType" />
-      <xsd:element name="Oumlaut" type="docEmptyType" />
-      <xsd:element name="times" type="docEmptyType" />
-      <xsd:element name="Oslash" type="docEmptyType" />
-      <xsd:element name="Ugrave" type="docEmptyType" />
-      <xsd:element name="Uacute" type="docEmptyType" />
-      <xsd:element name="Ucirc" type="docEmptyType" />
-      <xsd:element name="Uumlaut" type="docEmptyType" />
-      <xsd:element name="Yacute" type="docEmptyType" />
-      <xsd:element name="THORN" type="docEmptyType" />
-      <xsd:element name="szlig" type="docEmptyType" />
-      <xsd:element name="agrave" type="docEmptyType" />
-      <xsd:element name="aacute" type="docEmptyType" />
-      <xsd:element name="acirc" type="docEmptyType" />
-      <xsd:element name="atilde" type="docEmptyType" />
-      <xsd:element name="aumlaut" type="docEmptyType" />
-      <xsd:element name="aring" type="docEmptyType" />
-      <xsd:element name="aelig" type="docEmptyType" />
-      <xsd:element name="ccedil" type="docEmptyType" />
-      <xsd:element name="egrave" type="docEmptyType" />
-      <xsd:element name="eacute" type="docEmptyType" />
-      <xsd:element name="ecirc" type="docEmptyType" />
-      <xsd:element name="eumlaut" type="docEmptyType" />
-      <xsd:element name="igrave" type="docEmptyType" />
-      <xsd:element name="iacute" type="docEmptyType" />
-      <xsd:element name="icirc" type="docEmptyType" />
-      <xsd:element name="iumlaut" type="docEmptyType" />
-      <xsd:element name="eth" type="docEmptyType" />
-      <xsd:element name="ntilde" type="docEmptyType" />
-      <xsd:element name="ograve" type="docEmptyType" />
-      <xsd:element name="oacute" type="docEmptyType" />
-      <xsd:element name="ocirc" type="docEmptyType" />
-      <xsd:element name="otilde" type="docEmptyType" />
-      <xsd:element name="oumlaut" type="docEmptyType" />
-      <xsd:element name="divide" type="docEmptyType" />
-      <xsd:element name="oslash" type="docEmptyType" />
-      <xsd:element name="ugrave" type="docEmptyType" />
-      <xsd:element name="uacute" type="docEmptyType" />
-      <xsd:element name="ucirc" type="docEmptyType" />
-      <xsd:element name="uumlaut" type="docEmptyType" />
-      <xsd:element name="yacute" type="docEmptyType" />
-      <xsd:element name="thorn" type="docEmptyType" />
-      <xsd:element name="yumlaut" type="docEmptyType" />
-      <xsd:element name="fnof" type="docEmptyType" />
-      <xsd:element name="Alpha" type="docEmptyType" />
-      <xsd:element name="Beta" type="docEmptyType" />
-      <xsd:element name="Gamma" type="docEmptyType" />
-      <xsd:element name="Delta" type="docEmptyType" />
-      <xsd:element name="Epsilon" type="docEmptyType" />
-      <xsd:element name="Zeta" type="docEmptyType" />
-      <xsd:element name="Eta" type="docEmptyType" />
-      <xsd:element name="Theta" type="docEmptyType" />
-      <xsd:element name="Iota" type="docEmptyType" />
-      <xsd:element name="Kappa" type="docEmptyType" />
-      <xsd:element name="Lambda" type="docEmptyType" />
-      <xsd:element name="Mu" type="docEmptyType" />
-      <xsd:element name="Nu" type="docEmptyType" />
-      <xsd:element name="Xi" type="docEmptyType" />
-      <xsd:element name="Omicron" type="docEmptyType" />
-      <xsd:element name="Pi" type="docEmptyType" />
-      <xsd:element name="Rho" type="docEmptyType" />
-      <xsd:element name="Sigma" type="docEmptyType" />
-      <xsd:element name="Tau" type="docEmptyType" />
-      <xsd:element name="Upsilon" type="docEmptyType" />
-      <xsd:element name="Phi" type="docEmptyType" />
-      <xsd:element name="Chi" type="docEmptyType" />
-      <xsd:element name="Psi" type="docEmptyType" />
-      <xsd:element name="Omega" type="docEmptyType" />
-      <xsd:element name="alpha" type="docEmptyType" />
-      <xsd:element name="beta" type="docEmptyType" />
-      <xsd:element name="gamma" type="docEmptyType" />
-      <xsd:element name="delta" type="docEmptyType" />
-      <xsd:element name="epsilon" type="docEmptyType" />
-      <xsd:element name="zeta" type="docEmptyType" />
-      <xsd:element name="eta" type="docEmptyType" />
-      <xsd:element name="theta" type="docEmptyType" />
-      <xsd:element name="iota" type="docEmptyType" />
-      <xsd:element name="kappa" type="docEmptyType" />
-      <xsd:element name="lambda" type="docEmptyType" />
-      <xsd:element name="mu" type="docEmptyType" />
-      <xsd:element name="nu" type="docEmptyType" />
-      <xsd:element name="xi" type="docEmptyType" />
-      <xsd:element name="omicron" type="docEmptyType" />
-      <xsd:element name="pi" type="docEmptyType" />
-      <xsd:element name="rho" type="docEmptyType" />
-      <xsd:element name="sigmaf" type="docEmptyType" />
-      <xsd:element name="sigma" type="docEmptyType" />
-      <xsd:element name="tau" type="docEmptyType" />
-      <xsd:element name="upsilon" type="docEmptyType" />
-      <xsd:element name="phi" type="docEmptyType" />
-      <xsd:element name="chi" type="docEmptyType" />
-      <xsd:element name="psi" type="docEmptyType" />
-      <xsd:element name="omega" type="docEmptyType" />
-      <xsd:element name="thetasym" type="docEmptyType" />
-      <xsd:element name="upsih" type="docEmptyType" />
-      <xsd:element name="piv" type="docEmptyType" />
-      <xsd:element name="bull" type="docEmptyType" />
-      <xsd:element name="hellip" type="docEmptyType" />
-      <xsd:element name="prime" type="docEmptyType" />
-      <xsd:element name="Prime" type="docEmptyType" />
-      <xsd:element name="oline" type="docEmptyType" />
-      <xsd:element name="frasl" type="docEmptyType" />
-      <xsd:element name="weierp" type="docEmptyType" />
-      <xsd:element name="imaginary" type="docEmptyType" />
-      <xsd:element name="real" type="docEmptyType" />
-      <xsd:element name="trademark" type="docEmptyType" />
-      <xsd:element name="alefsym" type="docEmptyType" />
-      <xsd:element name="larr" type="docEmptyType" />
-      <xsd:element name="uarr" type="docEmptyType" />
-      <xsd:element name="rarr" type="docEmptyType" />
-      <xsd:element name="darr" type="docEmptyType" />
-      <xsd:element name="harr" type="docEmptyType" />
-      <xsd:element name="crarr" type="docEmptyType" />
-      <xsd:element name="lArr" type="docEmptyType" />
-      <xsd:element name="uArr" type="docEmptyType" />
-      <xsd:element name="rArr" type="docEmptyType" />
-      <xsd:element name="dArr" type="docEmptyType" />
-      <xsd:element name="hArr" type="docEmptyType" />
-      <xsd:element name="forall" type="docEmptyType" />
-      <xsd:element name="part" type="docEmptyType" />
-      <xsd:element name="exist" type="docEmptyType" />
-      <xsd:element name="empty" type="docEmptyType" />
-      <xsd:element name="nabla" type="docEmptyType" />
-      <xsd:element name="isin" type="docEmptyType" />
-      <xsd:element name="notin" type="docEmptyType" />
-      <xsd:element name="ni" type="docEmptyType" />
-      <xsd:element name="prod" type="docEmptyType" />
-      <xsd:element name="sum" type="docEmptyType" />
-      <xsd:element name="minus" type="docEmptyType" />
-      <xsd:element name="lowast" type="docEmptyType" />
-      <xsd:element name="radic" type="docEmptyType" />
-      <xsd:element name="prop" type="docEmptyType" />
-      <xsd:element name="infin" type="docEmptyType" />
-      <xsd:element name="ang" type="docEmptyType" />
-      <xsd:element name="and" type="docEmptyType" />
-      <xsd:element name="or" type="docEmptyType" />
-      <xsd:element name="cap" type="docEmptyType" />
-      <xsd:element name="cup" type="docEmptyType" />
-      <xsd:element name="int" type="docEmptyType" />
-      <xsd:element name="there4" type="docEmptyType" />
-      <xsd:element name="sim" type="docEmptyType" />
-      <xsd:element name="cong" type="docEmptyType" />
-      <xsd:element name="asymp" type="docEmptyType" />
-      <xsd:element name="ne" type="docEmptyType" />
-      <xsd:element name="equiv" type="docEmptyType" />
-      <xsd:element name="le" type="docEmptyType" />
-      <xsd:element name="ge" type="docEmptyType" />
-      <xsd:element name="sub" type="docEmptyType" />
-      <xsd:element name="sup" type="docEmptyType" />
-      <xsd:element name="nsub" type="docEmptyType" />
-      <xsd:element name="sube" type="docEmptyType" />
-      <xsd:element name="supe" type="docEmptyType" />
-      <xsd:element name="oplus" type="docEmptyType" />
-      <xsd:element name="otimes" type="docEmptyType" />
-      <xsd:element name="perp" type="docEmptyType" />
-      <xsd:element name="sdot" type="docEmptyType" />
-      <xsd:element name="lceil" type="docEmptyType" />
-      <xsd:element name="rceil" type="docEmptyType" />
-      <xsd:element name="lfloor" type="docEmptyType" />
-      <xsd:element name="rfloor" type="docEmptyType" />
-      <xsd:element name="lang" type="docEmptyType" />
-      <xsd:element name="rang" type="docEmptyType" />
-      <xsd:element name="loz" type="docEmptyType" />
-      <xsd:element name="spades" type="docEmptyType" />
-      <xsd:element name="clubs" type="docEmptyType" />
-      <xsd:element name="hearts" type="docEmptyType" />
-      <xsd:element name="diams" type="docEmptyType" />
-      <xsd:element name="OElig" type="docEmptyType" />
-      <xsd:element name="oelig" type="docEmptyType" />
-      <xsd:element name="Scaron" type="docEmptyType" />
-      <xsd:element name="scaron" type="docEmptyType" />
-      <xsd:element name="Yumlaut" type="docEmptyType" />
-      <xsd:element name="circ" type="docEmptyType" />
-      <xsd:element name="tilde" type="docEmptyType" />
-      <xsd:element name="ensp" type="docEmptyType" />
-      <xsd:element name="emsp" type="docEmptyType" />
-      <xsd:element name="thinsp" type="docEmptyType" />
-      <xsd:element name="zwnj" type="docEmptyType" />
-      <xsd:element name="zwj" type="docEmptyType" />
-      <xsd:element name="lrm" type="docEmptyType" />
-      <xsd:element name="rlm" type="docEmptyType" />
-      <xsd:element name="ndash" type="docEmptyType" />
-      <xsd:element name="mdash" type="docEmptyType" />
-      <xsd:element name="lsquo" type="docEmptyType" />
-      <xsd:element name="rsquo" type="docEmptyType" />
-      <xsd:element name="sbquo" type="docEmptyType" />
-      <xsd:element name="ldquo" type="docEmptyType" />
-      <xsd:element name="rdquo" type="docEmptyType" />
-      <xsd:element name="bdquo" type="docEmptyType" />
-      <xsd:element name="dagger" type="docEmptyType" />
-      <xsd:element name="Dagger" type="docEmptyType" />
-      <xsd:element name="permil" type="docEmptyType" />
-      <xsd:element name="lsaquo" type="docEmptyType" />
-      <xsd:element name="rsaquo" type="docEmptyType" />
-      <xsd:element name="euro" type="docEmptyType" />
-      <xsd:element name="tm" type="docEmptyType" />
-      <!-- end workaround for xsd.exe -->
-      <xsd:element name="hruler" type="docEmptyType" />
-      <xsd:element name="preformatted" type="docMarkupType" />
-      <xsd:element name="programlisting" type="listingType" />
-      <xsd:element name="verbatim" type="xsd:string" />
-      <xsd:element name="javadocliteral" type="xsd:string" />
-      <xsd:element name="javadoccode" type="xsd:string" />
-      <xsd:element name="indexentry" type="docIndexEntryType" />
-      <xsd:element name="orderedlist" type="docListType" />
-      <xsd:element name="itemizedlist" type="docListType" />
-      <xsd:element name="simplesect" type="docSimpleSectType" />
-      <xsd:element name="title" type="docTitleType" />
-      <xsd:element name="variablelist" type="docVariableListType" />
-      <xsd:element name="table" type="docTableType" />
-      <xsd:element name="heading" type="docHeadingType" />
-      <xsd:element name="dotfile" type="docImageFileType" />
-      <xsd:element name="mscfile" type="docImageFileType" />
-      <xsd:element name="diafile" type="docImageFileType" />
-      <xsd:element name="toclist" type="docTocListType" />
-      <xsd:element name="language" type="docLanguageType" />
-      <xsd:element name="parameterlist" type="docParamListType" />
-      <xsd:element name="xrefsect" type="docXRefSectType" />
-      <xsd:element name="copydoc" type="docCopyType" />
-      <xsd:element name="details" type="docDetailsType" />
-      <xsd:element name="blockquote" type="docBlockQuoteType" />
-      <xsd:element name="parblock" type="docParBlockType" />
-    </xsd:choice>
-  </xsd:group>
-
-  <xsd:complexType name="docParaType" mixed="true">
-    <xsd:group ref="docCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docMarkupType" mixed="true">
-    <xsd:group ref="docCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docURLLink" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="url" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docAnchorType" mixed="true">
-    <xsd:attribute name="id" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docFormulaType" mixed="true">
-    <xsd:attribute name="id" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docIndexEntryType">
-    <xsd:sequence>
-      <xsd:element name="primaryie" type="xsd:string" />
-      <xsd:element name="secondaryie" type="xsd:string" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docListType">
-    <xsd:sequence>
-      <xsd:element name="listitem" type="docListItemType" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="type" type="DoxOlType" />
-    <xsd:attribute name="start" type="xsd:integer" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docListItemType">
-    <xsd:sequence>
-      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="value" type="xsd:integer" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="docSimpleSectType">
-    <xsd:sequence>
-      <xsd:element name="title" type="docTitleType" minOccurs="0" />
-      <xsd:sequence minOccurs="0" maxOccurs="unbounded">
-        <xsd:element name="para" type="docParaType" minOccurs="1" maxOccurs="unbounded" />
-      </xsd:sequence>
-    </xsd:sequence>
-    <xsd:attribute name="kind" type="DoxSimpleSectKind" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docVarListEntryType">
-    <xsd:sequence>
-      <xsd:element name="term" type="docTitleType" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:group name="docVariableListGroup">
-    <xsd:sequence>
-      <xsd:element name="varlistentry" type="docVarListEntryType" />
-      <xsd:element name="listitem" type="docListItemType" />
-    </xsd:sequence>
-  </xsd:group>
-
-  <xsd:complexType name="docVariableListType">
-    <xsd:sequence>
-      <xsd:group ref="docVariableListGroup" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docRefTextType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="refid" type="xsd:string" />
-    <xsd:attribute name="kindref" type="DoxRefKind" />
-    <xsd:attribute name="external" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docTableType">
-    <xsd:sequence>
-      <xsd:element name="caption" type="docCaptionType" minOccurs="0" maxOccurs="1" />
-      <xsd:element name="row" type="docRowType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="rows" type="xsd:integer" />
-    <xsd:attribute name="cols" type="xsd:integer" />
-    <xsd:attribute name="width" type="xsd:string" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docRowType">
-    <xsd:sequence>
-      <xsd:element name="entry" type="docEntryType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docEntryType">
-    <xsd:sequence>
-      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="thead" type="DoxBool" />
-    <xsd:attribute name="colspan" type="xsd:integer" />
-    <xsd:attribute name="rowspan" type="xsd:integer" />
-    <xsd:attribute name="align" type="DoxAlign" />
-    <xsd:attribute name="valign" type="DoxVerticalAlign" />
-    <xsd:attribute name="width" type="xsd:string" />
-    <xsd:attribute name="class" type="xsd:string" />
-    <xsd:anyAttribute processContents="skip"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="docCaptionType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="id" type="xsd:string" /> 
-  </xsd:complexType>
-
-  <xsd:complexType name="docHeadingType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="level" type="xsd:integer" /> <!-- todo: range 1-6 -->
-  </xsd:complexType>
-
-  <xsd:complexType name="docImageType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="type" type="DoxImageKind" use="optional"/>
-    <xsd:attribute name="name" type="xsd:string" use="optional"/>
-    <xsd:attribute name="width" type="xsd:string" use="optional"/>
-    <xsd:attribute name="height" type="xsd:string" use="optional"/>
-    <xsd:attribute name="alt" type="xsd:string" use="optional"/>
-    <xsd:attribute name="inline" type="DoxBool" use="optional"/>
-    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="docDotMscType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="name" type="xsd:string" use="optional"/>
-    <xsd:attribute name="width" type="xsd:string" use="optional"/>
-    <xsd:attribute name="height" type="xsd:string" use="optional"/>
-    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="docImageFileType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="name" type="xsd:string" use="optional">
-      <xsd:annotation>
-        <xsd:documentation>The mentioned file will be located in the directory as specified by XML_OUTPUT</xsd:documentation>
-      </xsd:annotation>
-    </xsd:attribute>
-    <xsd:attribute name="width" type="xsd:string" use="optional"/>
-    <xsd:attribute name="height" type="xsd:string" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="docPlantumlType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="name" type="xsd:string" use="optional"/>
-    <xsd:attribute name="width" type="xsd:string" use="optional"/>
-    <xsd:attribute name="height" type="xsd:string" use="optional"/>
-    <xsd:attribute name="caption" type="xsd:string" use="optional"/>
-    <xsd:attribute name="engine" type="DoxPlantumlEngine" use="optional"/>
-  </xsd:complexType>
-
-  <xsd:complexType name="docTocItemType" mixed="true">
-    <xsd:group ref="docTitleCmdGroup" minOccurs="0" maxOccurs="unbounded" />
-    <xsd:attribute name="id" type="xsd:string" /> 
-  </xsd:complexType>
-
-  <xsd:complexType name="docTocListType">
-    <xsd:sequence>
-      <xsd:element name="tocitem" type="docTocItemType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docLanguageType">
-    <xsd:sequence>
-      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="langid" type="xsd:string" /> 
-  </xsd:complexType>
-
-  <xsd:complexType name="docParamListType">
-    <xsd:sequence>
-      <xsd:element name="parameteritem" type="docParamListItem" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-    <xsd:attribute name="kind" type="DoxParamListKind" /> 
-  </xsd:complexType>
-
-  <xsd:complexType name="docParamListItem">
-    <xsd:sequence>
-      <xsd:element name="parameternamelist" type="docParamNameList" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="parameterdescription" type="descriptionType" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docParamNameList">
-    <xsd:sequence>
-      <xsd:element name="parametertype" type="docParamType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="parametername" type="docParamName" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docParamType" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="1" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docParamName" mixed="true">
-    <xsd:sequence>
-      <xsd:element name="ref" type="refTextType" minOccurs="0" maxOccurs="1" />
-    </xsd:sequence>
-    <xsd:attribute name="direction" type="DoxParamDir" use="optional" />
-  </xsd:complexType>
-
-  <xsd:complexType name="docXRefSectType">
-    <xsd:sequence>
-      <xsd:element name="xreftitle" type="xsd:string" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="xrefdescription" type="descriptionType" />
-    </xsd:sequence>
-    <xsd:attribute name="id" type="xsd:string" /> 
-  </xsd:complexType>
-
-  <xsd:complexType name="docCopyType">
-    <xsd:sequence>
-      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="sect1" type="docSect1Type" minOccurs="0" maxOccurs="unbounded" />
-      <xsd:element name="internal" type="docInternalType" minOccurs="0" />
-    </xsd:sequence>
-    <xsd:attribute name="link" type="xsd:string" /> 
-  </xsd:complexType>
-
-  <xsd:complexType name="docDetailsType">
-    <xsd:sequence>
-      <xsd:element name="summary" type="docSummaryType" minOccurs="0" maxOccurs="1" />
-      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docBlockQuoteType">
-    <xsd:sequence>
-      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docParBlockType">
-    <xsd:sequence>
-      <xsd:element name="para" type="docParaType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docEmptyType"/>
-
-  <xsd:complexType name="tableofcontentsType">
-    <xsd:sequence>
-      <xsd:element name="tocsect" type="tableofcontentsKindType" minOccurs="1" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="tableofcontentsKindType">
-    <xsd:sequence>
-      <xsd:element name="name" type="xsd:string" minOccurs="1" maxOccurs="1"/>
-      <xsd:element name="reference" type="xsd:string" minOccurs="1" maxOccurs="1"/>
-      <xsd:element name="tableofcontents" type="tableofcontentsType" minOccurs="0" maxOccurs="unbounded" />
-    </xsd:sequence>
-  </xsd:complexType>
-
-  <xsd:complexType name="docEmojiType">
-    <xsd:attribute name="name" type="xsd:string"/>
-    <xsd:attribute name="unicode" type="xsd:string"/>
-  </xsd:complexType>
-
-  <!-- Simple types -->
-
-  <xsd:simpleType name="DoxBool">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="yes" />
-      <xsd:enumeration value="no" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxGraphRelation">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="include" />
-      <xsd:enumeration value="usage" />
-      <xsd:enumeration value="template-instance" />
-      <xsd:enumeration value="public-inheritance" />
-      <xsd:enumeration value="protected-inheritance" />
-      <xsd:enumeration value="private-inheritance" />
-      <xsd:enumeration value="type-constraint" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxRefKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="compound" />
-      <xsd:enumeration value="member" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxMemberKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="define" />
-      <xsd:enumeration value="property" />
-      <xsd:enumeration value="event" />
-      <xsd:enumeration value="variable" />
-      <xsd:enumeration value="typedef" />
-      <xsd:enumeration value="enum" />
-      <xsd:enumeration value="function" />
-      <xsd:enumeration value="signal" />
-      <xsd:enumeration value="prototype" />
-      <xsd:enumeration value="friend" />
-      <xsd:enumeration value="dcop" />
-      <xsd:enumeration value="slot" />
-      <xsd:enumeration value="interface" />
-      <xsd:enumeration value="service" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxProtectionKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="public" />
-      <xsd:enumeration value="protected" />
-      <xsd:enumeration value="private" />
-      <xsd:enumeration value="package" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxRefQualifierKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="lvalue" />
-      <xsd:enumeration value="rvalue" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxLanguage">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="Unknown" />
-      <xsd:enumeration value="IDL" />
-      <xsd:enumeration value="Java" />
-      <xsd:enumeration value="C#" />
-      <xsd:enumeration value="D" />
-      <xsd:enumeration value="PHP" />
-      <xsd:enumeration value="Objective-C" />
-      <xsd:enumeration value="C++" />
-      <xsd:enumeration value="JavaScript" />
-      <xsd:enumeration value="Python" />
-      <xsd:enumeration value="Fortran" />
-      <xsd:enumeration value="VHDL" />
-      <xsd:enumeration value="XML" />
-      <xsd:enumeration value="SQL" />
-      <xsd:enumeration value="Markdown" />
-      <xsd:enumeration value="Slice" />
-      <xsd:enumeration value="Lex" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxVirtualKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="non-virtual" />
-      <xsd:enumeration value="virtual" />
-      <xsd:enumeration value="pure-virtual" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxCompoundKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="class" />
-      <xsd:enumeration value="struct" />
-      <xsd:enumeration value="union" />
-      <xsd:enumeration value="interface" />
-      <xsd:enumeration value="protocol" />
-      <xsd:enumeration value="category" />
-      <xsd:enumeration value="exception" />
-      <xsd:enumeration value="service" />
-      <xsd:enumeration value="singleton" />
-      <xsd:enumeration value="module" />
-      <xsd:enumeration value="type" />
-      <xsd:enumeration value="file" />
-      <xsd:enumeration value="namespace" />
-      <xsd:enumeration value="group" />
-      <xsd:enumeration value="page" />
-      <xsd:enumeration value="example" />
-      <xsd:enumeration value="dir" />
-      <xsd:enumeration value="concept" />
-      <xsd:enumeration value="module" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxSectionKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="user-defined" />
-      <xsd:enumeration value="public-type" />
-      <xsd:enumeration value="public-func" />
-      <xsd:enumeration value="public-attrib" />
-      <xsd:enumeration value="public-slot" />
-      <xsd:enumeration value="signal" />
-      <xsd:enumeration value="dcop-func" />
-      <xsd:enumeration value="property" />
-      <xsd:enumeration value="event" />
-      <xsd:enumeration value="public-static-func" />
-      <xsd:enumeration value="public-static-attrib" />
-      <xsd:enumeration value="protected-type" />
-      <xsd:enumeration value="protected-func" />
-      <xsd:enumeration value="protected-attrib" />
-      <xsd:enumeration value="protected-slot" />
-      <xsd:enumeration value="protected-static-func" />
-      <xsd:enumeration value="protected-static-attrib" />
-      <xsd:enumeration value="package-type" />
-      <xsd:enumeration value="package-func" />
-      <xsd:enumeration value="package-attrib" />
-      <xsd:enumeration value="package-static-func" />
-      <xsd:enumeration value="package-static-attrib" />
-      <xsd:enumeration value="private-type" />
-      <xsd:enumeration value="private-func" />
-      <xsd:enumeration value="private-attrib" />
-      <xsd:enumeration value="private-slot" />
-      <xsd:enumeration value="private-static-func" />
-      <xsd:enumeration value="private-static-attrib" />
-      <xsd:enumeration value="friend" />
-      <xsd:enumeration value="related" />
-      <xsd:enumeration value="define" />
-      <xsd:enumeration value="prototype" />
-      <xsd:enumeration value="typedef" />
-      <xsd:enumeration value="enum" />
-      <xsd:enumeration value="func" />
-      <xsd:enumeration value="var" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxHighlightClass">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="comment" />
-      <xsd:enumeration value="normal" />
-      <xsd:enumeration value="preprocessor" />
-      <xsd:enumeration value="keyword" />
-      <xsd:enumeration value="keywordtype" />
-      <xsd:enumeration value="keywordflow" />
-      <xsd:enumeration value="stringliteral" />
-      <xsd:enumeration value="xmlcdata" />
-      <xsd:enumeration value="charliteral" />
-      <xsd:enumeration value="vhdlkeyword" />
-      <xsd:enumeration value="vhdllogic" />
-      <xsd:enumeration value="vhdlchar" />
-      <xsd:enumeration value="vhdldigit" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxSimpleSectKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="see" />
-      <xsd:enumeration value="return" />
-      <xsd:enumeration value="author" />
-      <xsd:enumeration value="authors" />
-      <xsd:enumeration value="version" />
-      <xsd:enumeration value="since" />
-      <xsd:enumeration value="date" />
-      <xsd:enumeration value="note" />
-      <xsd:enumeration value="warning" />
-      <xsd:enumeration value="pre" />
-      <xsd:enumeration value="post" />
-      <xsd:enumeration value="copyright" />
-      <xsd:enumeration value="invariant" />
-      <xsd:enumeration value="remark" />
-      <xsd:enumeration value="attention" />
-      <xsd:enumeration value="par" />
-      <xsd:enumeration value="rcs" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxVersionNumber">
-    <xsd:restriction base="xsd:string">
-      <xsd:pattern value="\d+\.\d+.*" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxImageKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="html" />
-      <xsd:enumeration value="latex" />
-      <xsd:enumeration value="docbook" />
-      <xsd:enumeration value="rtf" />
-      <xsd:enumeration value="xml" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxPlantumlEngine">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="uml"/>
-      <xsd:enumeration value="bpm"/>
-      <xsd:enumeration value="wire"/>
-      <xsd:enumeration value="dot"/>
-      <xsd:enumeration value="ditaa"/>
-      <xsd:enumeration value="salt"/>
-      <xsd:enumeration value="math"/>
-      <xsd:enumeration value="latex"/>
-      <xsd:enumeration value="gantt"/>
-      <xsd:enumeration value="mindmap"/>
-      <xsd:enumeration value="wbs"/>
-      <xsd:enumeration value="yaml"/>
-      <xsd:enumeration value="creole"/>
-      <xsd:enumeration value="json"/>
-      <xsd:enumeration value="flow"/>
-      <xsd:enumeration value="board"/>
-      <xsd:enumeration value="git"/>
-      <xsd:enumeration value="hcl"/>
-      <xsd:enumeration value="regex"/>
-      <xsd:enumeration value="ebnf"/>
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxParamListKind">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="param" />
-      <xsd:enumeration value="retval" />
-      <xsd:enumeration value="exception" />
-      <xsd:enumeration value="templateparam" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxCharRange">
-    <xsd:restriction base="xsd:string">
-      <xsd:pattern value="[aeiouncAEIOUNC]" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxParamDir">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="in"/>
-      <xsd:enumeration value="out"/>
-      <xsd:enumeration value="inout"/>
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxAccessor">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="retain"/>
-      <xsd:enumeration value="copy"/>
-      <xsd:enumeration value="assign"/>
-      <xsd:enumeration value="weak"/>
-      <xsd:enumeration value="strong"/>
-      <xsd:enumeration value="unretained"/>
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxAlign">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="left"/>
-      <xsd:enumeration value="right"/>
-      <xsd:enumeration value="center"/>
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxVerticalAlign">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="bottom"/>
-      <xsd:enumeration value="top"/>
-      <xsd:enumeration value="middle"/>
-    </xsd:restriction>
-  </xsd:simpleType>
-
-  <xsd:simpleType name="DoxOlType">
-    <xsd:restriction base="xsd:string">
-      <xsd:enumeration value="1" />
-      <xsd:enumeration value="a" />
-      <xsd:enumeration value="A" />
-      <xsd:enumeration value="i" />
-      <xsd:enumeration value="I" />
-    </xsd:restriction>
-  </xsd:simpleType>
-
-</xsd:schema>
-
diff --git a/doxyxml/cpoly_8_h.xml b/doxyxml/cpoly_8_h.xml
deleted file mode 100644
index dbe6847..0000000
--- a/doxyxml/cpoly_8_h.xml
+++ /dev/null
@@ -1,146 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="cpoly_8_h" kind="file" language="C++">
-    <compoundname>cpoly.H</compoundname>
-    <includes refid="poly_8_h" local="yes">poly.H</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/cpoly.H</label>
-        <link refid="cpoly_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>poly.H</label>
-        <link refid="poly_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="4">
-        <label>fstream</label>
-      </node>
-      <node id="3">
-        <label>iostream</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_c_poly" prot="public">CPoly</innerclass>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="cpoly_8_h_1a59ecd58623c31c641057cb84cd3c0139" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void bomb_CPoly</definition>
-        <argsstring>(const char *)</argsstring>
-        <name>bomb_CPoly</name>
-        <param>
-          <type>const char *</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/cpoly.H" line="68" column="6" declfile="/home/weinberg/Projects/EXP/include/cpoly.H" declline="68" declcolumn="6"/>
-      </memberdef>
-      <memberdef kind="function" id="cpoly_8_h_1a2477aab5627be7eaef9747ae683d4af0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void bomb_CPoly_operation</definition>
-        <argsstring>(const char *)</argsstring>
-        <name>bomb_CPoly_operation</name>
-        <param>
-          <type>const char *</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/cpoly.H" line="67" column="6" declfile="/home/weinberg/Projects/EXP/include/cpoly.H" declline="67" declcolumn="6"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_cpoly_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_cpoly_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&quot;<ref refid="poly_8_h" kindref="compound">poly.H</ref>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6" refid="class_c_poly" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>Eigen::VectorXcd</highlight></codeline>
-<codeline lineno="7"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_c_poly_1a969e3f70aad60653b9f4e610014fb978" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_c_poly_1a969e3f70aad60653b9f4e610014fb978" kindref="member">order</ref>;</highlight></codeline>
-<codeline lineno="12" refid="class_c_poly_1a60135c14cac772b71b1c4d37e50a2412" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_poly_1a60135c14cac772b71b1c4d37e50a2412" kindref="member">reduce_order</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>constructors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="18" refid="class_c_poly_1a9886569156df79ca44fbe6b1fb7cec0a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly_1a9886569156df79ca44fbe6b1fb7cec0a" kindref="member">CPoly</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="19" refid="class_c_poly_1a36107e6801caadd73d9a688dea55faf1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly_1a36107e6801caadd73d9a688dea55faf1" kindref="member">CPoly</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="20" refid="class_c_poly_1a63566119ef1b5867909ccaf2354584d2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly_1a63566119ef1b5867909ccaf2354584d2" kindref="member">CPoly</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="21" refid="class_c_poly_1ab62837853f1a1cba09c4b9838d2b41e7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly_1ab62837853f1a1cba09c4b9838d2b41e7" kindref="member">CPoly</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXcd<sp/>&amp;);</highlight></codeline>
-<codeline lineno="22" refid="class_c_poly_1a072bfe6b04887d8deb20e24af6656a74" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly_1a072bfe6b04887d8deb20e24af6656a74" kindref="member">CPoly</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="23" refid="class_c_poly_1a6caca1b239a8568ce40712e96ce20d30" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly_1a6caca1b239a8568ce40712e96ce20d30" kindref="member">CPoly</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>the<sp/>destructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>~CPoly(void);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>reduce<sp/>order<sp/>by<sp/>n<sp/>(BE<sp/>CAREFUL<sp/>with<sp/>this<sp/>one)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="31" refid="class_c_poly_1a8dd20f6c37eb654f8633ea4ba3e24ccc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_poly_1a8dd20f6c37eb654f8633ea4ba3e24ccc" kindref="member">Pop</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{<ref refid="class_c_poly_1a969e3f70aad60653b9f4e610014fb978" kindref="member">order</ref><sp/>-=<sp/>i;}</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>access<sp/>to<sp/>privates</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_c_poly_1a7a4451ba4caada9dd73cdcb541ebc0db" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;<ref refid="class_c_poly_1a7a4451ba4caada9dd73cdcb541ebc0db" kindref="member">operator=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="36" refid="class_c_poly_1ac452104fdea710634e68f09e5d4e60d3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_c_poly_1ac452104fdea710634e68f09e5d4e60d3" kindref="member">getorder</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_c_poly_1a969e3f70aad60653b9f4e610014fb978" kindref="member">order</ref>;}</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>unary<sp/>plus<sp/>and<sp/>minus</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_c_poly_1af4549741abcfc4ebe0f0740694f1a909" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/><ref refid="class_c_poly_1af4549741abcfc4ebe0f0740694f1a909" kindref="member">operator+</ref>()<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;}</highlight></codeline>
-<codeline lineno="41" refid="class_c_poly_1afd7ea1863ae07aaf76c39b86cb30aed5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/><ref refid="class_c_poly_1afd7ea1863ae07aaf76c39b86cb30aed5" kindref="member">operator-</ref>();</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Vector<sp/>addition<sp/>and<sp/>subtraction</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="45" refid="class_c_poly_1ae0060d8389401745d5447b32181d6db2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;<ref refid="class_c_poly_1ae0060d8389401745d5447b32181d6db2" kindref="member">operator+=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="46" refid="class_c_poly_1acbc6c01d4af95b1d8a63a60dd0a7738e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/><ref refid="class_c_poly_1acbc6c01d4af95b1d8a63a60dd0a7738e" kindref="member">operator+</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_c_poly_1a3c08062a3e3317e81f269bfc8f224ce9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;<ref refid="class_c_poly_1a3c08062a3e3317e81f269bfc8f224ce9" kindref="member">operator-=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="49" refid="class_c_poly_1a1d200439c93c6d65b62f7cc475b5569c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/><ref refid="class_c_poly_1a1d200439c93c6d65b62f7cc475b5569c" kindref="member">operator-</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_c_poly_1af5ce12201cb3816d72d6c0c993481afe" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;<ref refid="class_c_poly_1af5ce12201cb3816d72d6c0c993481afe" kindref="member">operator&amp;=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">/*<sp/>Cauchy<sp/>product<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_c_poly_1af3cc5f442bae41cd78cacb888b534e09" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/><ref refid="class_c_poly_1af3cc5f442bae41cd78cacb888b534e09" kindref="member">operator&amp;</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_c_poly_1ad4f3d405618035449e32b077bf483b2c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;<ref refid="class_c_poly_1ad4f3d405618035449e32b077bf483b2c" kindref="member">operator%=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">/*<sp/>Synthetic<sp/>division<sp/>for<sp/>power<sp/>series<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_c_poly_1a47ff1b905e5b8133a1a1d07c8e055c50" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/><ref refid="class_c_poly_1a47ff1b905e5b8133a1a1d07c8e055c50" kindref="member">operator%</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_c_poly" kindref="compound">CPoly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Evaluate<sp/>polynomial</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="59" refid="class_c_poly_1ac4b081a0d67388d5a595ea766aed62ea" refkind="member"><highlight class="normal"><sp/><sp/>std::complex&lt;double&gt;<sp/><ref refid="class_c_poly_1ac4b081a0d67388d5a595ea766aed62ea" kindref="member">eval</ref>(std::complex&lt;double&gt;<sp/>z);</highlight></codeline>
-<codeline lineno="60" refid="class_c_poly_1a8bf7ec5ff2bfd2f9664849cae1c35ef6" refkind="member"><highlight class="normal"><sp/><sp/>std::complex&lt;double&gt;<sp/><ref refid="class_c_poly_1a8bf7ec5ff2bfd2f9664849cae1c35ef6" kindref="member">deriv</ref>(std::complex&lt;double&gt;<sp/>z);</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">/*<sp/>IO<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_c_poly_1a87cfa383f120f5a4214e1fda5c2cb167" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_c_poly_1a87cfa383f120f5a4214e1fda5c2cb167" kindref="member">print</ref>(ostream<sp/>&amp;);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="cpoly_8_h_1a2477aab5627be7eaef9747ae683d4af0" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="cpoly_8_h_1a2477aab5627be7eaef9747ae683d4af0" kindref="member">bomb_CPoly_operation</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="68" refid="cpoly_8_h_1a59ecd58623c31c641057cb84cd3c0139" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="cpoly_8_h_1a59ecd58623c31c641057cb84cd3c0139" kindref="member">bomb_CPoly</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/cpoly.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/cubic_8_h.xml b/doxyxml/cubic_8_h.xml
deleted file mode 100644
index 0d529ba..0000000
--- a/doxyxml/cubic_8_h.xml
+++ /dev/null
@@ -1,96 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="cubic_8_h" kind="file" language="C++">
-    <compoundname>cubic.H</compoundname>
-    <includes local="no">Eigen/Eigen</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/cubic.H</label>
-        <link refid="cubic_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Eigen/Eigen</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_cubic___table" prot="public">Cubic_Table</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>cubic_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>cubic_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6" refid="class_cubic___table" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref></highlight></codeline>
-<codeline lineno="7"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="9" refid="class_cubic___table_1a2ad76b829ae93963f914a5bc179baa4f" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_cubic___table_1a6d4784c9b81a2bb8c493c614109dc99c" kindref="member">xgrid</ref>,<sp/><ref refid="class_cubic___table_1a2ad76b829ae93963f914a5bc179baa4f" kindref="member">dx</ref>;</highlight></codeline>
-<codeline lineno="10" refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="13" refid="class_cubic___table_1a628f301259f0adb609e9a267b34c56e6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cubic___table_1a628f301259f0adb609e9a267b34c56e6" kindref="member">Cubic_Table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="14" refid="class_cubic___table_1ad1d69a6b1750acf56db758066ba49da5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cubic___table_1ad1d69a6b1750acf56db758066ba49da5" kindref="member">~Cubic_Table</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="16" refid="class_cubic___table_1ad90f1bab7aa9812576c97288813b3980" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cubic___table_1ad90f1bab7aa9812576c97288813b3980" kindref="member">Cubic_Table</ref>(<ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c)</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a2ad76b829ae93963f914a5bc179baa4f" kindref="member">dx</ref><sp/>=<sp/>c.<ref refid="class_cubic___table_1a2ad76b829ae93963f914a5bc179baa4f" kindref="member">dx</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a6d4784c9b81a2bb8c493c614109dc99c" kindref="member">xgrid</ref><sp/>=<sp/>c.<ref refid="class_cubic___table_1a6d4784c9b81a2bb8c493c614109dc99c" kindref="member">xgrid</ref>;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref><sp/>=<sp/>c.<ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="23" refid="class_cubic___table_1a7f67a2a87dda9ff4d3d6c23a96ceca90" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;<ref refid="class_cubic___table_1a7f67a2a87dda9ff4d3d6c23a96ceca90" kindref="member">operator=</ref>(<ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c)</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a2ad76b829ae93963f914a5bc179baa4f" kindref="member">dx</ref>=c.<ref refid="class_cubic___table_1a2ad76b829ae93963f914a5bc179baa4f" kindref="member">dx</ref>;<sp/></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a6d4784c9b81a2bb8c493c614109dc99c" kindref="member">xgrid</ref>=c.<ref refid="class_cubic___table_1a6d4784c9b81a2bb8c493c614109dc99c" kindref="member">xgrid</ref>;<sp/></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref>=c.<ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref>;<sp/></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="32" refid="class_cubic___table_1aa933fab1c73e0d09283530b23ce7518b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;<ref refid="class_cubic___table_1aa933fab1c73e0d09283530b23ce7518b" kindref="member">operator+=</ref>(<ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c)</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref><sp/>+=<sp/>c.<ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="38" refid="class_cubic___table_1a84efa6f2ca665a41b7f799d3aefbdc2c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;<ref refid="class_cubic___table_1a84efa6f2ca665a41b7f799d3aefbdc2c" kindref="member">operator-=</ref>(<ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c)</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref><sp/>-=<sp/>c.<ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="44" refid="class_cubic___table_1a81e968684b86cf201014cbb294a82dc7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;<ref refid="class_cubic___table_1a81e968684b86cf201014cbb294a82dc7" kindref="member">operator*=</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref><sp/>*=<sp/>x;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="50" refid="class_cubic___table_1a152201c0fe13fca40559f63d4fa5b576" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;<ref refid="class_cubic___table_1a152201c0fe13fca40559f63d4fa5b576" kindref="member">operator/=</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_cubic___table_1a8052c091c9ae5ca35065fdf2ba72dc9d" kindref="member">a</ref><sp/>/=<sp/>x;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="58" refid="class_cubic___table_1a95d13ff4edcce469ab16c5c9c9a17b59" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/><ref refid="class_cubic___table_1a95d13ff4edcce469ab16c5c9c9a17b59" kindref="member">operator+</ref>(<ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c1,<sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c2);<sp/></highlight></codeline>
-<codeline lineno="59" refid="class_cubic___table_1a320a836162b7971b2cd6543acfbb2022" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/><ref refid="class_cubic___table_1a320a836162b7971b2cd6543acfbb2022" kindref="member">operator-</ref>(<ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c1,<sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c2);</highlight></codeline>
-<codeline lineno="60" refid="class_cubic___table_1a07a66952fc85bc11902ba2f7406d9bd3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/><ref refid="class_cubic___table_1a07a66952fc85bc11902ba2f7406d9bd3" kindref="member">operator*</ref>(<ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="61" refid="class_cubic___table_1ab85e4e2fb625eff4d072010828b34209" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/><ref refid="class_cubic___table_1ab85e4e2fb625eff4d072010828b34209" kindref="member">operator/</ref>(<ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="62" refid="class_cubic___table_1a5e1dff2e4c2b65c6df729e58a21ae225" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/><ref refid="class_cubic___table_1a5e1dff2e4c2b65c6df729e58a21ae225" kindref="member">operator*</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/><ref refid="class_cubic___table" kindref="compound">Cubic_Table</ref><sp/>&amp;c);</highlight></codeline>
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diff --git a/doxyxml/cxxopts_8_h.xml b/doxyxml/cxxopts_8_h.xml
deleted file mode 100644
index dfe1352..0000000
--- a/doxyxml/cxxopts_8_h.xml
+++ /dev/null
@@ -1,2947 +0,0 @@
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-<codeline lineno="52"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/><sp/></highlight><highlight class="comment">//<sp/>CXXOPTS_NO_REGEX</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Nonstandard<sp/>before<sp/>C++17,<sp/>which<sp/>is<sp/>coincidentally<sp/>what<sp/>we<sp/>also<sp/>need<sp/>for<sp/>&lt;optional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>__has_include</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight><highlight class="preprocessor">#<sp/><sp/>if<sp/>__has_include(&lt;optional&gt;)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight><highlight class="preprocessor">#<sp/><sp/><sp/><sp/>include<sp/>&lt;optional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight><highlight class="preprocessor">#<sp/><sp/><sp/><sp/>ifdef<sp/>__cpp_lib_optional</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight><highlight class="preprocessor">#<sp/><sp/><sp/><sp/><sp/><sp/>define<sp/>CXXOPTS_HAS_OPTIONAL</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="preprocessor">#<sp/><sp/><sp/><sp/>endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight><highlight class="preprocessor">#<sp/><sp/>endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>__cplusplus<sp/>&gt;=<sp/>201603L</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>CXXOPTS_NODISCARD<sp/>[[nodiscard]]</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>CXXOPTS_NODISCARD</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>CXXOPTS_VECTOR_DELIMITER</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="cxxopts_8_h_1a564e0c1dcc7d9a5202f36755f4fb07c7" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>CXXOPTS_VECTOR_DELIMITER<sp/>&apos;,&apos;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="cxxopts_8_h_1a00d4ee40bcf31ae271e78a9c52632bc7" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>CXXOPTS__VERSION_MAJOR<sp/>3</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="cxxopts_8_h_1aa67ae10831707133de2518234e695084" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>CXXOPTS__VERSION_MINOR<sp/>0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="76" refid="cxxopts_8_h_1ab3de1a4b00ea1ddee4799e6382992e79" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>CXXOPTS__VERSION_PATCH<sp/>0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>(__GNUC__<sp/>&lt;<sp/>10<sp/>||<sp/>(__GNUC__<sp/>==<sp/>10<sp/>&amp;&amp;<sp/>__GNUC_MINOR__<sp/>&lt;<sp/>1))<sp/>&amp;&amp;<sp/>__GNUC__<sp/>&gt;=<sp/>6</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight><highlight class="preprocessor"><sp/><sp/>#define<sp/>CXXOPTS_NULL_DEREF_IGNORE</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="namespacecxxopts" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts" kindref="compound">cxxopts</ref></highlight></codeline>
-<codeline lineno="83"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">constexpr</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="85" refid="namespacecxxopts_1ae722cb9457c284596136a40555eef19e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>uint8_t<sp/><ref refid="namespacecxxopts_1ae722cb9457c284596136a40555eef19e" kindref="member">major</ref>,<sp/><ref refid="namespacecxxopts_1aecaf1c73662b522ae01a195dede9ed38" kindref="member">minor</ref>,<sp/><ref refid="namespacecxxopts_1a6d7d82764847cde60d24c9077234adef" kindref="member">patch</ref>;</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/>}<sp/><ref refid="namespacecxxopts_1ac84689ecff5a9b45c67a8acea377baee" kindref="member">version</ref><sp/>=<sp/>{</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a00d4ee40bcf31ae271e78a9c52632bc7" kindref="member">CXXOPTS__VERSION_MAJOR</ref>,</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1aa67ae10831707133de2518234e695084" kindref="member">CXXOPTS__VERSION_MINOR</ref>,</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1ab3de1a4b00ea1ddee4799e6382992e79" kindref="member">CXXOPTS__VERSION_PATCH</ref></highlight></codeline>
-<codeline lineno="90" refid="namespacecxxopts_1ac84689ecff5a9b45c67a8acea377baee" refkind="member"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="91"><highlight class="normal">}<sp/></highlight><highlight class="comment">//<sp/>namespace<sp/>cxxopts</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight><highlight class="comment">//when<sp/>we<sp/>ask<sp/>cxxopts<sp/>to<sp/>use<sp/>Unicode,<sp/>help<sp/>strings<sp/>are<sp/>processed<sp/>using<sp/>ICU,</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight><highlight class="comment">//which<sp/>results<sp/>in<sp/>the<sp/>correct<sp/>lengths<sp/>being<sp/>computed<sp/>for<sp/>strings<sp/>when<sp/>they</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight><highlight class="comment">//are<sp/>formatted<sp/>for<sp/>the<sp/>help<sp/>output</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight><highlight class="comment">//it<sp/>is<sp/>necessary<sp/>to<sp/>make<sp/>sure<sp/>that<sp/>&lt;unicode/unistr.h&gt;<sp/>can<sp/>be<sp/>found<sp/>by<sp/>the</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight><highlight class="comment">//compiler,<sp/>and<sp/>that<sp/>icu-uc<sp/>is<sp/>linked<sp/>in<sp/>to<sp/>the<sp/>binary.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>CXXOPTS_USE_UNICODE</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;unicode/unistr.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts" kindref="compound">cxxopts</ref></highlight></codeline>
-<codeline lineno="103"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>=<sp/>icu::UnicodeString;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(std::string<sp/>s)</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>icu::UnicodeString::fromUTF8(std::move(s));</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined(__GNUC__)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="114"><highlight class="normal"></highlight><highlight class="comment">//<sp/>GNU<sp/>GCC<sp/>with<sp/>-Weffc++<sp/>will<sp/>issue<sp/>a<sp/>warning<sp/>regarding<sp/>the<sp/>upcoming<sp/>class,<sp/>we<sp/>want<sp/>to<sp/>silence<sp/>it:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight><highlight class="comment">//<sp/>warning:<sp/>base<sp/>class<sp/>&apos;class<sp/>std::enable_shared_from_this&lt;cxxopts::Value&gt;&apos;<sp/>has<sp/>accessible<sp/>non-virtual<sp/>destructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>push</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>ignored<sp/>&quot;-Wnon-virtual-dtor&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>ignored<sp/>&quot;-Weffc++&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight><highlight class="comment">//<sp/>This<sp/>will<sp/>be<sp/>ignored<sp/>under<sp/>other<sp/>compilers<sp/>like<sp/>LLVM<sp/>clang.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">UnicodeStringIterator</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">iterator_category<sp/>=<sp/>std::forward_iterator_tag;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">value_type<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>int32_t;</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">difference_type<sp/><sp/><sp/>=<sp/>std::ptrdiff_t;</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">pointer<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>int32_t*;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">reference<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>int32_t&amp;;</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/>UnicodeStringIterator(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>icu::UnicodeString*<sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">,<sp/>int32_t<sp/>pos)</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/>s(string)</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/>i(pos)</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/>value_type</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/>operator*()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="144"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s-&gt;char32At(i);</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/>operator==(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>UnicodeStringIterator&amp;<sp/>rhs)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="150"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s<sp/>==<sp/>rhs.s<sp/>&amp;&amp;<sp/>i<sp/>==<sp/>rhs.i;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"></highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/>operator!=(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>UnicodeStringIterator&amp;<sp/>rhs)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="156"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>!(*</highlight><highlight class="keyword">this</highlight><highlight class="normal"><sp/>==<sp/>rhs);</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/>UnicodeStringIterator&amp;</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/>operator++()</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++i;</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/>UnicodeStringIterator</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/>operator+(int32_t<sp/>v)</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>UnicodeStringIterator(s,<sp/>i<sp/>+<sp/>v);</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"></highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>icu::UnicodeString*<sp/>s;</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/>int32_t<sp/>i;</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined(__GNUC__)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="178"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>pop</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="179"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="180"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(<ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;s,<sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>a)</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s.append(std::move(a));</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"></highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(<ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>s,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n,<sp/>UChar32<sp/>c)</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>i<sp/>=<sp/>0;<sp/>i<sp/>!=<sp/>n;<sp/>++i)</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>s.append(c);</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s;</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"></highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>Iterator&gt;</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(<ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>s,<sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/>begin,<sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/>end)</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(begin<sp/>!=<sp/>end)</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>s.append(*begin);</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++begin;</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"></highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s;</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a6e40a21a193047cd4575ac90411ca295" kindref="member">stringLength</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>s)</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s.length();</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/>std::string</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a21f7a08caacc41cc3475f4bc7f9a1a67" kindref="member">toUTF8String</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>s)</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/>result;</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/>s.toUTF8String(result);</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>result;</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"></highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a3ffde9e4565bba175bd56c06c0f99162" kindref="member">empty</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>s)</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s.isEmpty();</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="236"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight></codeline>
-<codeline lineno="238"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal">std</highlight></codeline>
-<codeline lineno="239"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/>cxxopts::UnicodeStringIterator</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/>begin(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>icu::UnicodeString&amp;<sp/>s)</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>cxxopts::UnicodeStringIterator(&amp;s,<sp/>0);</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="248"><highlight class="normal"><sp/><sp/>cxxopts::UnicodeStringIterator</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/>end(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>icu::UnicodeString&amp;<sp/>s)</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>cxxopts::UnicodeStringIterator(&amp;s,<sp/>s.length());</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="253"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255"><highlight class="normal"></highlight><highlight class="comment">//ifdef<sp/>CXXOPTS_USE_UNICODE</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="256"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="257"><highlight class="normal"></highlight></codeline>
-<codeline lineno="258"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts" kindref="compound">cxxopts</ref></highlight></codeline>
-<codeline lineno="259"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="260" refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>=<sp/>std::string;</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"></highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/>T</highlight></codeline>
-<codeline lineno="264" refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(T&amp;&amp;<sp/>t)</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::forward&lt;T&gt;(t);</highlight></codeline>
-<codeline lineno="267"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"></highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="271" refid="namespacecxxopts_1a6e40a21a193047cd4575ac90411ca295" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a6e40a21a193047cd4575ac90411ca295" kindref="member">stringLength</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>s)</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s.length();</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"></highlight></codeline>
-<codeline lineno="276"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;</highlight></codeline>
-<codeline lineno="278" refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(<ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;s,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>a)</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s.append(a);</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"></highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;</highlight></codeline>
-<codeline lineno="285" refid="namespacecxxopts_1a703def90aa29effc5b58a0a5658b263b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(<ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>s,<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>c)</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s.append(n,<sp/>c);</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"></highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>Iterator&gt;</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;</highlight></codeline>
-<codeline lineno="292" refid="namespacecxxopts_1af1a4ae4022414cbbc08d505174914185" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(<ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>s,<sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/>begin,<sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/>end)</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s.append(begin,<sp/>end);</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"></highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"><sp/><sp/>std::string</highlight></codeline>
-<codeline lineno="299" refid="namespacecxxopts_1a21f7a08caacc41cc3475f4bc7f9a1a67" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a21f7a08caacc41cc3475f4bc7f9a1a67" kindref="member">toUTF8String</ref>(T&amp;&amp;<sp/>t)</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::forward&lt;T&gt;(t);</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"></highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="306" refid="namespacecxxopts_1a3ffde9e4565bba175bd56c06c0f99162" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a3ffde9e4565bba175bd56c06c0f99162" kindref="member">empty</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>s)</highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>s.empty();</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="310"><highlight class="normal">}<sp/></highlight><highlight class="comment">//<sp/>namespace<sp/>cxxopts</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="311"><highlight class="normal"></highlight></codeline>
-<codeline lineno="312"><highlight class="normal"></highlight><highlight class="comment">//ifdef<sp/>CXXOPTS_USE_UNICODE</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="313"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="314"><highlight class="normal"></highlight></codeline>
-<codeline lineno="315"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts" kindref="compound">cxxopts</ref></highlight></codeline>
-<codeline lineno="316"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">namespace</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>_WIN32</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>LQUOTE(</highlight><highlight class="stringliteral">&quot;\&apos;&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>RQUOTE(</highlight><highlight class="stringliteral">&quot;\&apos;&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="322"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>LQUOTE(</highlight><highlight class="stringliteral">&quot;‘&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>RQUOTE(</highlight><highlight class="stringliteral">&quot;’&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="326"><highlight class="normal"><sp/><sp/>}<sp/></highlight><highlight class="comment">//<sp/>namespace</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="327"><highlight class="normal"></highlight></codeline>
-<codeline lineno="328"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined(__GNUC__)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="329"><highlight class="normal"></highlight><highlight class="comment">//<sp/>GNU<sp/>GCC<sp/>with<sp/>-Weffc++<sp/>will<sp/>issue<sp/>a<sp/>warning<sp/>regarding<sp/>the<sp/>upcoming<sp/>class,<sp/>we<sp/>want<sp/>to<sp/>silence<sp/>it:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="330"><highlight class="normal"></highlight><highlight class="comment">//<sp/>warning:<sp/>base<sp/>class<sp/>&apos;class<sp/>std::enable_shared_from_this&lt;cxxopts::Value&gt;&apos;<sp/>has<sp/>accessible<sp/>non-virtual<sp/>destructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="331"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>push</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="332"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>ignored<sp/>&quot;-Wnon-virtual-dtor&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="333"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>ignored<sp/>&quot;-Weffc++&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="334"><highlight class="normal"></highlight><highlight class="comment">//<sp/>This<sp/>will<sp/>be<sp/>ignored<sp/>under<sp/>other<sp/>compilers<sp/>like<sp/>LLVM<sp/>clang.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="335"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="336" refid="classcxxopts_1_1_value" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_value" kindref="compound">Value</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::enable_shared_from_this&lt;Value&gt;</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"></highlight></codeline>
-<codeline lineno="340" refid="classcxxopts_1_1_value_1afbbfc1c371d0b8bab3548be76523d12c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_value_1afbbfc1c371d0b8bab3548be76523d12c" kindref="member">~Value</ref>()<sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="341"><highlight class="normal"></highlight></codeline>
-<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="344" refid="classcxxopts_1_1_value_1a17916d6a48e57c999c2dc23fa6b22539" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_value_1a17916d6a48e57c999c2dc23fa6b22539" kindref="member">clone</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="345"><highlight class="normal"></highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="347" refid="classcxxopts_1_1_value_1a3c962e4ff3294721f5c9f6ac3fc00cc7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_value_1a3c962e4ff3294721f5c9f6ac3fc00cc7" kindref="member">parse</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="348"><highlight class="normal"></highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="350" refid="classcxxopts_1_1_value_1a9246a55e299ea5ef34346af46977fab4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_value_1a9246a55e299ea5ef34346af46977fab4" kindref="member">parse</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"></highlight></codeline>
-<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="354"><highlight class="normal"></highlight></codeline>
-<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="357"><highlight class="normal"></highlight></codeline>
-<codeline lineno="358"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="360"><highlight class="normal"></highlight></codeline>
-<codeline lineno="361"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::string</highlight></codeline>
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-<codeline lineno="363"><highlight class="normal"></highlight></codeline>
-<codeline lineno="364"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::string</highlight></codeline>
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-<codeline lineno="366"><highlight class="normal"></highlight></codeline>
-<codeline lineno="367"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="368" refid="classcxxopts_1_1_value_1a96cc46d76d458baf37099cd94cf4e857" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_value_1a96cc46d76d458baf37099cd94cf4e857" kindref="member">default_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="369"><highlight class="normal"></highlight></codeline>
-<codeline lineno="370"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="371" refid="classcxxopts_1_1_value_1adf963773eb53a7af1bc8cb97a517b27e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_value_1adf963773eb53a7af1bc8cb97a517b27e" kindref="member">implicit_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="372"><highlight class="normal"></highlight></codeline>
-<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="374" refid="classcxxopts_1_1_value_1a4bba2137fbc7ee9c670a64e552ac05fe" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_value_1a4bba2137fbc7ee9c670a64e552ac05fe" kindref="member">no_implicit_value</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="375"><highlight class="normal"></highlight></codeline>
-<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="377" refid="classcxxopts_1_1_value_1a77a4a731bcbbd95afca43f82affe5aaa" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_value_1a77a4a731bcbbd95afca43f82affe5aaa" kindref="member">is_boolean</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>=<sp/>0;</highlight></codeline>
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-<codeline lineno="379"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined(__GNUC__)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="380"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>pop</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="381"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="382" refid="classcxxopts_1_1_option_exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_option_exception" kindref="compound">OptionException</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::exception</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="385" refid="classcxxopts_1_1_option_exception_1adeba699012dd6041a966f3d7a53b9c47" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_exception_1adeba699012dd6041a966f3d7a53b9c47" kindref="member">OptionException</ref>(std::string<sp/><sp/>message)</highlight></codeline>
-<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_exception_1aff1460a5b83bee97c0343c9b85c4c81c" kindref="member">m_message</ref>(std::move(message))</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="388"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="389"><highlight class="normal"></highlight></codeline>
-<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*</highlight></codeline>
-<codeline lineno="392" refid="classcxxopts_1_1_option_exception_1a9b53b66ca94838f8d1d696fad2576f3e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_exception_1a9b53b66ca94838f8d1d696fad2576f3e" kindref="member">what</ref>()<sp/>const<sp/>noexcept</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="393"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_exception_1aff1460a5b83bee97c0343c9b85c4c81c" kindref="member">m_message</ref>.c_str();</highlight></codeline>
-<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"></highlight></codeline>
-<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="398" refid="classcxxopts_1_1_option_exception_1aff1460a5b83bee97c0343c9b85c4c81c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_option_exception_1aff1460a5b83bee97c0343c9b85c4c81c" kindref="member">m_message</ref>;</highlight></codeline>
-<codeline lineno="399"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="400"><highlight class="normal"></highlight></codeline>
-<codeline lineno="401" refid="classcxxopts_1_1_option_spec_exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_option_spec_exception" kindref="compound">OptionSpecException</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_exception" kindref="compound">OptionException</ref></highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="404"><highlight class="normal"></highlight></codeline>
-<codeline lineno="405" refid="classcxxopts_1_1_option_spec_exception_1a0bea2dfad20862c59c70311246fcb354" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_spec_exception_1a0bea2dfad20862c59c70311246fcb354" kindref="member">OptionSpecException</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>message)</highlight></codeline>
-<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_exception" kindref="compound">OptionException</ref>(message)</highlight></codeline>
-<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="409"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="410"><highlight class="normal"></highlight></codeline>
-<codeline lineno="411" refid="classcxxopts_1_1_option_parse_exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_exception" kindref="compound">OptionException</ref></highlight></codeline>
-<codeline lineno="412"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="414" refid="classcxxopts_1_1_option_parse_exception_1a5a29d9742ef8d0edc05c46d942debd05" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception_1a5a29d9742ef8d0edc05c46d942debd05" kindref="member">OptionParseException</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>message)</highlight></codeline>
-<codeline lineno="415"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_exception" kindref="compound">OptionException</ref>(message)</highlight></codeline>
-<codeline lineno="416"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="417"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="418"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="419"><highlight class="normal"></highlight></codeline>
-<codeline lineno="420" refid="classcxxopts_1_1option__exists__error" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1option__exists__error" kindref="compound">option_exists_error</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_spec_exception" kindref="compound">OptionSpecException</ref></highlight></codeline>
-<codeline lineno="421"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="423" refid="classcxxopts_1_1option__exists__error_1a2734bc9372936fa24999f08ad3032bca" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1option__exists__error_1a2734bc9372936fa24999f08ad3032bca" kindref="member">option_exists_error</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option)</highlight></codeline>
-<codeline lineno="424"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_spec_exception" kindref="compound">OptionSpecException</ref>(</highlight><highlight class="stringliteral">&quot;Option<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>option<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>already<sp/>exists&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="427"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="428"><highlight class="normal"></highlight></codeline>
-<codeline lineno="429" refid="classcxxopts_1_1invalid__option__format__error" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1invalid__option__format__error" kindref="compound">invalid_option_format_error</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_spec_exception" kindref="compound">OptionSpecException</ref></highlight></codeline>
-<codeline lineno="430"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="431"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="432" refid="classcxxopts_1_1invalid__option__format__error_1ae31d4f488bbee0eebe50e7c8949a6fb6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1invalid__option__format__error_1ae31d4f488bbee0eebe50e7c8949a6fb6" kindref="member">invalid_option_format_error</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>format)</highlight></codeline>
-<codeline lineno="433"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_spec_exception" kindref="compound">OptionSpecException</ref>(</highlight><highlight class="stringliteral">&quot;Invalid<sp/>option<sp/>format<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>format<sp/>+<sp/>RQUOTE)</highlight></codeline>
-<codeline lineno="434"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="435"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="436"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="437"><highlight class="normal"></highlight></codeline>
-<codeline lineno="438" refid="classcxxopts_1_1option__syntax__exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1option__syntax__exception" kindref="compound">option_syntax_exception</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref><sp/>{</highlight></codeline>
-<codeline lineno="439"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="440" refid="classcxxopts_1_1option__syntax__exception_1a358fbda6263eccdcd235d7da42bd7d5e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1option__syntax__exception_1a358fbda6263eccdcd235d7da42bd7d5e" kindref="member">option_syntax_exception</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text)</highlight></codeline>
-<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref>(</highlight><highlight class="stringliteral">&quot;Argument<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>text<sp/>+<sp/>RQUOTE<sp/>+</highlight></codeline>
-<codeline lineno="442"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;<sp/>starts<sp/>with<sp/>a<sp/>-<sp/>but<sp/>has<sp/>incorrect<sp/>syntax&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="443"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="444"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="445"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="446"><highlight class="normal"></highlight></codeline>
-<codeline lineno="447" refid="classcxxopts_1_1option__not__exists__exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1option__not__exists__exception" kindref="compound">option_not_exists_exception</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref></highlight></codeline>
-<codeline lineno="448"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="450" refid="classcxxopts_1_1option__not__exists__exception_1a3a48a64b139a9fd7f27bffe350cf6b76" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1option__not__exists__exception_1a3a48a64b139a9fd7f27bffe350cf6b76" kindref="member">option_not_exists_exception</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option)</highlight></codeline>
-<codeline lineno="451"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref>(</highlight><highlight class="stringliteral">&quot;Option<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>option<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>does<sp/>not<sp/>exist&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="452"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="453"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="454"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="455"><highlight class="normal"></highlight></codeline>
-<codeline lineno="456" refid="classcxxopts_1_1missing__argument__exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1missing__argument__exception" kindref="compound">missing_argument_exception</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref></highlight></codeline>
-<codeline lineno="457"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="458"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="459" refid="classcxxopts_1_1missing__argument__exception_1a394d6f889c4bd90dd554ebd4d8cd50a2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1missing__argument__exception_1a394d6f889c4bd90dd554ebd4d8cd50a2" kindref="member">missing_argument_exception</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option)</highlight></codeline>
-<codeline lineno="460"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref>(</highlight></codeline>
-<codeline lineno="461"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Option<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>option<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>is<sp/>missing<sp/>an<sp/>argument&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="462"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="463"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="464"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="465"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="466"><highlight class="normal"></highlight></codeline>
-<codeline lineno="467" refid="classcxxopts_1_1option__requires__argument__exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1option__requires__argument__exception" kindref="compound">option_requires_argument_exception</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref></highlight></codeline>
-<codeline lineno="468"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="469"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="470" refid="classcxxopts_1_1option__requires__argument__exception_1a4dd16f0718fc2952cf0e632d757800b0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1option__requires__argument__exception_1a4dd16f0718fc2952cf0e632d757800b0" kindref="member">option_requires_argument_exception</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option)</highlight></codeline>
-<codeline lineno="471"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref>(</highlight></codeline>
-<codeline lineno="472"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Option<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>option<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>requires<sp/>an<sp/>argument&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="473"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="474"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="475"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="476"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="477"><highlight class="normal"></highlight></codeline>
-<codeline lineno="478" refid="classcxxopts_1_1option__not__has__argument__exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1option__not__has__argument__exception" kindref="compound">option_not_has_argument_exception</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref></highlight></codeline>
-<codeline lineno="479"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="480"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="481" refid="classcxxopts_1_1option__not__has__argument__exception_1afc3b2cbef0a6c2f63756bcc9f2c2746e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1option__not__has__argument__exception_1afc3b2cbef0a6c2f63756bcc9f2c2746e" kindref="member">option_not_has_argument_exception</ref></highlight></codeline>
-<codeline lineno="482"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="483"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option,</highlight></codeline>
-<codeline lineno="484"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>arg</highlight></codeline>
-<codeline lineno="485"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="486"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref>(</highlight></codeline>
-<codeline lineno="487"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Option<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>option<sp/>+<sp/>RQUOTE<sp/>+</highlight></codeline>
-<codeline lineno="488"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;<sp/>does<sp/>not<sp/>take<sp/>an<sp/>argument,<sp/>but<sp/>argument<sp/>&quot;</highlight><highlight class="normal"><sp/>+</highlight></codeline>
-<codeline lineno="489"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>LQUOTE<sp/>+<sp/>arg<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>given&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="490"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="491"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="492"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="493"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="494"><highlight class="normal"></highlight></codeline>
-<codeline lineno="495" refid="classcxxopts_1_1option__not__present__exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1option__not__present__exception" kindref="compound">option_not_present_exception</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref></highlight></codeline>
-<codeline lineno="496"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="497"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="498" refid="classcxxopts_1_1option__not__present__exception_1ade0b732924a309c3823367cbe403f1d3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1option__not__present__exception_1ade0b732924a309c3823367cbe403f1d3" kindref="member">option_not_present_exception</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option)</highlight></codeline>
-<codeline lineno="499"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref>(</highlight><highlight class="stringliteral">&quot;Option<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>option<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>not<sp/>present&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="500"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="501"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="502"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="503"><highlight class="normal"></highlight></codeline>
-<codeline lineno="504" refid="classcxxopts_1_1option__has__no__value__exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1option__has__no__value__exception" kindref="compound">option_has_no_value_exception</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_exception" kindref="compound">OptionException</ref></highlight></codeline>
-<codeline lineno="505"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="506"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="507" refid="classcxxopts_1_1option__has__no__value__exception_1aa4459b5fb837a4722d0884e4fcfa5ee4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1option__has__no__value__exception_1aa4459b5fb837a4722d0884e4fcfa5ee4" kindref="member">option_has_no_value_exception</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option)</highlight></codeline>
-<codeline lineno="508"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_exception" kindref="compound">OptionException</ref>(</highlight></codeline>
-<codeline lineno="509"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>!option.<ref refid="namespacecxxopts_1a3ffde9e4565bba175bd56c06c0f99162" kindref="member">empty</ref>()<sp/>?</highlight></codeline>
-<codeline lineno="510"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(</highlight><highlight class="stringliteral">&quot;Option<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>option<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>has<sp/>no<sp/>value&quot;</highlight><highlight class="normal">)<sp/>:</highlight></codeline>
-<codeline lineno="511"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Option<sp/>has<sp/>no<sp/>value&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="512"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="513"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="514"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="515"><highlight class="normal"></highlight></codeline>
-<codeline lineno="516" refid="classcxxopts_1_1argument__incorrect__type" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1argument__incorrect__type" kindref="compound">argument_incorrect_type</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref></highlight></codeline>
-<codeline lineno="517"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="518"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="519" refid="classcxxopts_1_1argument__incorrect__type_1adf2fdc98794172201b1209c6d16dfceb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1argument__incorrect__type_1adf2fdc98794172201b1209c6d16dfceb" kindref="member">argument_incorrect_type</ref></highlight></codeline>
-<codeline lineno="520"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="521"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>arg</highlight></codeline>
-<codeline lineno="522"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="523"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref>(</highlight></codeline>
-<codeline lineno="524"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Argument<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>arg<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>failed<sp/>to<sp/>parse&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="525"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="526"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="527"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="528"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="529"><highlight class="normal"></highlight></codeline>
-<codeline lineno="530" refid="classcxxopts_1_1option__required__exception" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1option__required__exception" kindref="compound">option_required_exception</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref></highlight></codeline>
-<codeline lineno="531"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="532"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="533" refid="classcxxopts_1_1option__required__exception_1a0f7af231cec958b7912b0b010351584f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1option__required__exception_1a0f7af231cec958b7912b0b010351584f" kindref="member">option_required_exception</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option)</highlight></codeline>
-<codeline lineno="534"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parse_exception" kindref="compound">OptionParseException</ref>(</highlight></codeline>
-<codeline lineno="535"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Option<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>LQUOTE<sp/>+<sp/>option<sp/>+<sp/>RQUOTE<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>is<sp/>required<sp/>but<sp/>not<sp/>present&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="536"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="537"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="538"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="539"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="540"><highlight class="normal"></highlight></codeline>
-<codeline lineno="541"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="542" refid="namespacecxxopts_1a466f47408560fa08e43bf48ec2366b22" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a466f47408560fa08e43bf48ec2366b22" kindref="member">throw_or_mimic</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text)</highlight></codeline>
-<codeline lineno="543"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="544"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">static_assert</highlight><highlight class="normal">(std::is_base_of&lt;std::exception,<sp/>T&gt;::value,</highlight></codeline>
-<codeline lineno="545"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;throw_or_mimic<sp/>only<sp/>works<sp/>on<sp/>std::exception<sp/>and<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="546"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;deriving<sp/>classes&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="547"><highlight class="normal"></highlight></codeline>
-<codeline lineno="548"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>CXXOPTS_NO_EXCEPTIONS</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="549"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>If<sp/>CXXOPTS_NO_EXCEPTIONS<sp/>is<sp/>not<sp/>defined,<sp/>just<sp/>throw</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="550"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>T{text};</highlight></codeline>
-<codeline lineno="551"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="552"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Otherwise<sp/>manually<sp/>instantiate<sp/>the<sp/>exception,<sp/>print<sp/>what()<sp/>to<sp/>stderr,</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="553"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>and<sp/>exit</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="554"><highlight class="normal"><sp/><sp/><sp/><sp/>T<sp/>exception{text};</highlight></codeline>
-<codeline lineno="555"><highlight class="normal"><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/>exception.<ref refid="classcxxopts_1_1_option_exception_1a9b53b66ca94838f8d1d696fad2576f3e" kindref="member">what</ref>()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="556"><highlight class="normal"><sp/><sp/><sp/><sp/>std::exit(EXIT_FAILURE);</highlight></codeline>
-<codeline lineno="557"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="558"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="559"><highlight class="normal"></highlight></codeline>
-<codeline lineno="560" refid="namespacecxxopts_1_1values" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal">values</highlight></codeline>
-<codeline lineno="561"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="562" refid="namespacecxxopts_1_1values_1_1parser__tool" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal">parser_tool</highlight></codeline>
-<codeline lineno="563"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="564" refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc" kindref="compound">IntegerDesc</ref></highlight></codeline>
-<codeline lineno="565"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="566" refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a03eb11087b99130f7e098f8b6a3a5f50" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a03eb11087b99130f7e098f8b6a3a5f50" kindref="member">negative</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="567" refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a382f4c32680ded0fb611303f90ad0425" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a382f4c32680ded0fb611303f90ad0425" kindref="member">base</ref><sp/><sp/><sp/><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="568" refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a20ab2c3d23d9210773f377b083e898a4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a20ab2c3d23d9210773f377b083e898a4" kindref="member">value</ref><sp/><sp/><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="569"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="570" refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc" kindref="compound">ArguDesc</ref><sp/>{</highlight></codeline>
-<codeline lineno="571" refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a35ee7f646c94992a633956cfb1807d70" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a35ee7f646c94992a633956cfb1807d70" kindref="member">arg_name</ref><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="572" refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a40b774c45dd1737936c205efa87168e4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a40b774c45dd1737936c205efa87168e4" kindref="member">grouping</ref><sp/><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="573" refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a2bb71b16c97fa27af41d8d03bca1f06a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a2bb71b16c97fa27af41d8d03bca1f06a" kindref="member">set_value</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="574" refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1ac60c40e3b9798897ebbfd76040eb2208" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1ac60c40e3b9798897ebbfd76040eb2208" kindref="member">value</ref><sp/><sp/><sp/><sp/><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="575"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="576"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>CXXOPTS_NO_REGEX</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="577"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc" kindref="compound">IntegerDesc</ref><sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a7912e06f8258eb2a618ba94a7ede46d4" kindref="member">SplitInteger</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;text)</highlight></codeline>
-<codeline lineno="578"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="579"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(text.empty())</highlight></codeline>
-<codeline lineno="580"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="581"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="582"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="583"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>IntegerDesc<sp/>desc;</highlight></codeline>
-<codeline lineno="584"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*pdata<sp/>=<sp/>text.c_str();</highlight></codeline>
-<codeline lineno="585"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="586"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="587"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="588"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc.negative<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;-&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="589"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="590"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(strncmp(pdata,<sp/></highlight><highlight class="stringliteral">&quot;0x&quot;</highlight><highlight class="normal">,<sp/>2)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="591"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="592"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>2;</highlight></codeline>
-<codeline lineno="593"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc.base<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;0x&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="594"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="595"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*pdata<sp/>!=<sp/></highlight><highlight class="charliteral">&apos;\0&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="596"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="597"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc.value<sp/>=<sp/>std::string(pdata);</highlight></codeline>
-<codeline lineno="598"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="599"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="600"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="601"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="602"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="603"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>desc;</highlight></codeline>
-<codeline lineno="604"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="605"><highlight class="normal"></highlight></codeline>
-<codeline lineno="606"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a1b7a1e0063d8f2dd9dc02ada983a1aec" kindref="member">IsTrueText</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;text)</highlight></codeline>
-<codeline lineno="607"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="608"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*pdata<sp/>=<sp/>text.c_str();</highlight></codeline>
-<codeline lineno="609"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;t&apos;</highlight><highlight class="normal"><sp/>||<sp/>*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;T&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="610"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="611"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="612"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(strncmp(pdata,<sp/></highlight><highlight class="stringliteral">&quot;rue\0&quot;</highlight><highlight class="normal">,<sp/>4)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="613"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="614"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="615"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="616"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="617"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(strncmp(pdata,<sp/></highlight><highlight class="stringliteral">&quot;1\0&quot;</highlight><highlight class="normal">,<sp/>2)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="618"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="619"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="620"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="621"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="622"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="623"><highlight class="normal"></highlight></codeline>
-<codeline lineno="624"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1aef26707302ebd8565487e8d6268c2285" kindref="member">IsFalseText</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;text)</highlight></codeline>
-<codeline lineno="625"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="626"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*pdata<sp/>=<sp/>text.c_str();</highlight></codeline>
-<codeline lineno="627"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;f&apos;</highlight><highlight class="normal"><sp/>||<sp/>*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;F&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="628"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="629"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="630"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(strncmp(pdata,<sp/></highlight><highlight class="stringliteral">&quot;alse\0&quot;</highlight><highlight class="normal">,<sp/>5)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="631"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="632"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="633"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="634"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="635"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(strncmp(pdata,<sp/></highlight><highlight class="stringliteral">&quot;0\0&quot;</highlight><highlight class="normal">,<sp/>2)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="636"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="637"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="638"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="639"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="640"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="641"><highlight class="normal"></highlight></codeline>
-<codeline lineno="642"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/>std::pair&lt;std::string,<sp/>std::string&gt;<sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a87d93ecf1931bfdf64feb40a008fa909" kindref="member">SplitSwitchDef</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;text)</highlight></codeline>
-<codeline lineno="643"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="644"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>short_sw,<sp/>long_sw;</highlight></codeline>
-<codeline lineno="645"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*pdata<sp/>=<sp/>text.c_str();</highlight></codeline>
-<codeline lineno="646"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(isalnum(*pdata)<sp/>&amp;&amp;<sp/>*(pdata<sp/>+<sp/>1)<sp/>==<sp/></highlight><highlight class="charliteral">&apos;,&apos;</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="647"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>short_sw<sp/>=<sp/>std::string(1,<sp/>*pdata);</highlight></codeline>
-<codeline lineno="648"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>2;</highlight></codeline>
-<codeline lineno="649"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="650"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;<sp/>&apos;</highlight><highlight class="normal">)<sp/>{<sp/>pdata<sp/>+=<sp/>1;<sp/>}</highlight></codeline>
-<codeline lineno="651"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(isalnum(*pdata))<sp/>{</highlight></codeline>
-<codeline lineno="652"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*store<sp/>=<sp/>pdata;</highlight></codeline>
-<codeline lineno="653"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="654"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(isalnum(*pdata)<sp/>||<sp/>*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal"><sp/>||<sp/>*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;_&apos;</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="655"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="656"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="657"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;\0&apos;</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="658"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>long_sw<sp/>=<sp/>std::string(store,<sp/>pdata<sp/>-<sp/>store);</highlight></codeline>
-<codeline lineno="659"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="660"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;invalid_option_format_error&gt;(text);</highlight></codeline>
-<codeline lineno="661"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="662"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="663"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::pair&lt;std::string,<sp/>std::string&gt;(short_sw,<sp/>long_sw);</highlight></codeline>
-<codeline lineno="664"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="665"><highlight class="normal"></highlight></codeline>
-<codeline lineno="666"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/>ArguDesc<sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a0c95fda26d85865d26182d1df061ed8a" kindref="member">ParseArgument</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*arg,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>&amp;matched)</highlight></codeline>
-<codeline lineno="667"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="668"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ArguDesc<sp/>argu_desc;</highlight></codeline>
-<codeline lineno="669"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*pdata<sp/>=<sp/>arg;</highlight></codeline>
-<codeline lineno="670"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matched<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="671"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(strncmp(pdata,<sp/></highlight><highlight class="stringliteral">&quot;--&quot;</highlight><highlight class="normal">,<sp/>2)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="672"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="673"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>2;</highlight></codeline>
-<codeline lineno="674"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(isalnum(*pdata))</highlight></codeline>
-<codeline lineno="675"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="676"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a35ee7f646c94992a633956cfb1807d70" kindref="member">arg_name</ref>.push_back(*pdata);</highlight></codeline>
-<codeline lineno="677"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="678"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(isalnum(*pdata)<sp/>||<sp/>*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal"><sp/>||<sp/>*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;_&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="679"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="680"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.arg_name.push_back(*pdata);</highlight></codeline>
-<codeline lineno="681"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="682"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="683"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(argu_desc.arg_name.length()<sp/>&gt;<sp/>1)</highlight></codeline>
-<codeline lineno="684"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="685"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;=&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="686"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="687"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.set_value<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="688"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="689"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*pdata<sp/>!=<sp/></highlight><highlight class="charliteral">&apos;\0&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="690"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="691"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.value<sp/>=<sp/>std::string(pdata);</highlight></codeline>
-<codeline lineno="692"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="693"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matched<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="694"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="695"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;\0&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="696"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="697"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matched<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="698"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="699"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="700"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="701"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="702"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(strncmp(pdata,<sp/></highlight><highlight class="stringliteral">&quot;-&quot;</highlight><highlight class="normal">,<sp/>1)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="703"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="704"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="705"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.grouping<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="706"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(isalnum(*pdata))</highlight></codeline>
-<codeline lineno="707"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="708"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.arg_name.push_back(*pdata);</highlight></codeline>
-<codeline lineno="709"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pdata<sp/>+=<sp/>1;</highlight></codeline>
-<codeline lineno="710"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="711"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matched<sp/>=<sp/>!argu_desc.arg_name.empty()<sp/>&amp;&amp;<sp/>*pdata<sp/>==<sp/></highlight><highlight class="charliteral">&apos;\0&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="712"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="713"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>argu_desc;</highlight></codeline>
-<codeline lineno="714"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="715"><highlight class="normal"></highlight></codeline>
-<codeline lineno="716"><highlight class="normal"></highlight><highlight class="preprocessor">#else<sp/><sp/></highlight><highlight class="comment">//<sp/>CXXOPTS_NO_REGEX</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="717"><highlight class="normal"></highlight></codeline>
-<codeline lineno="718"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">namespace</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="719"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="720"><highlight class="normal"></highlight></codeline>
-<codeline lineno="721"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::basic_regex&lt;char&gt;<sp/>integer_pattern</highlight></codeline>
-<codeline lineno="722"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(</highlight><highlight class="stringliteral">&quot;(-)?(0x)?([0-9a-zA-Z]+)|((0x)?0)&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="723"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::basic_regex&lt;char&gt;<sp/>truthy_pattern</highlight></codeline>
-<codeline lineno="724"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(</highlight><highlight class="stringliteral">&quot;(t|T)(rue)?|1&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="725"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::basic_regex&lt;char&gt;<sp/>falsy_pattern</highlight></codeline>
-<codeline lineno="726"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(</highlight><highlight class="stringliteral">&quot;(f|F)(alse)?|0&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="727"><highlight class="normal"></highlight></codeline>
-<codeline lineno="728"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::basic_regex&lt;char&gt;<sp/>option_matcher</highlight></codeline>
-<codeline lineno="729"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(</highlight><highlight class="stringliteral">&quot;--([[:alnum:]][-_[:alnum:]]+)(=(.*))?|-([[:alnum:]]+)&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="730"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::basic_regex&lt;char&gt;<sp/>option_specifier</highlight></codeline>
-<codeline lineno="731"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(</highlight><highlight class="stringliteral">&quot;(([[:alnum:]]),)?[<sp/>]*([[:alnum:]][-_[:alnum:]]*)?&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="732"><highlight class="normal"></highlight></codeline>
-<codeline lineno="733"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="comment">//<sp/>namespace</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="734"><highlight class="normal"></highlight></codeline>
-<codeline lineno="735" refid="namespacecxxopts_1_1values_1_1parser__tool_1a7912e06f8258eb2a618ba94a7ede46d4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc" kindref="compound">IntegerDesc</ref><sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a7912e06f8258eb2a618ba94a7ede46d4" kindref="member">SplitInteger</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;text)</highlight></codeline>
-<codeline lineno="736"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="737"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::smatch<sp/>match;</highlight></codeline>
-<codeline lineno="738"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::regex_match(text,<sp/>match,<sp/>integer_pattern);</highlight></codeline>
-<codeline lineno="739"><highlight class="normal"></highlight></codeline>
-<codeline lineno="740"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(match.length()<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="741"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="742"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="743"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="744"><highlight class="normal"></highlight></codeline>
-<codeline lineno="745"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc" kindref="compound">IntegerDesc</ref><sp/>desc;</highlight></codeline>
-<codeline lineno="746"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a03eb11087b99130f7e098f8b6a3a5f50" kindref="member">negative</ref><sp/>=<sp/>match[1];</highlight></codeline>
-<codeline lineno="747"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a382f4c32680ded0fb611303f90ad0425" kindref="member">base</ref><sp/>=<sp/>match[2];</highlight></codeline>
-<codeline lineno="748"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a20ab2c3d23d9210773f377b083e898a4" kindref="member">value</ref><sp/>=<sp/>match[3];</highlight></codeline>
-<codeline lineno="749"><highlight class="normal"></highlight></codeline>
-<codeline lineno="750"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(match.length(4)<sp/>&gt;<sp/>0)</highlight></codeline>
-<codeline lineno="751"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="752"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a382f4c32680ded0fb611303f90ad0425" kindref="member">base</ref><sp/>=<sp/>match[5];</highlight></codeline>
-<codeline lineno="753"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a20ab2c3d23d9210773f377b083e898a4" kindref="member">value</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;0&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="754"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>desc;</highlight></codeline>
-<codeline lineno="755"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="756"><highlight class="normal"></highlight></codeline>
-<codeline lineno="757"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>desc;</highlight></codeline>
-<codeline lineno="758"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="759"><highlight class="normal"></highlight></codeline>
-<codeline lineno="760" refid="namespacecxxopts_1_1values_1_1parser__tool_1a1b7a1e0063d8f2dd9dc02ada983a1aec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a1b7a1e0063d8f2dd9dc02ada983a1aec" kindref="member">IsTrueText</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;text)</highlight></codeline>
-<codeline lineno="761"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="762"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::smatch<sp/>result;</highlight></codeline>
-<codeline lineno="763"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::regex_match(text,<sp/>result,<sp/>truthy_pattern);</highlight></codeline>
-<codeline lineno="764"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>!result.empty();</highlight></codeline>
-<codeline lineno="765"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="766"><highlight class="normal"></highlight></codeline>
-<codeline lineno="767" refid="namespacecxxopts_1_1values_1_1parser__tool_1aef26707302ebd8565487e8d6268c2285" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1aef26707302ebd8565487e8d6268c2285" kindref="member">IsFalseText</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;text)</highlight></codeline>
-<codeline lineno="768"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="769"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::smatch<sp/>result;</highlight></codeline>
-<codeline lineno="770"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::regex_match(text,<sp/>result,<sp/>falsy_pattern);</highlight></codeline>
-<codeline lineno="771"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>!result.empty();</highlight></codeline>
-<codeline lineno="772"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="773"><highlight class="normal"></highlight></codeline>
-<codeline lineno="774" refid="namespacecxxopts_1_1values_1_1parser__tool_1a87d93ecf1931bfdf64feb40a008fa909" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/>std::pair&lt;std::string,<sp/>std::string&gt;<sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a87d93ecf1931bfdf64feb40a008fa909" kindref="member">SplitSwitchDef</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;text)</highlight></codeline>
-<codeline lineno="775"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="776"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::match_results&lt;const<sp/>char*&gt;<sp/>result;</highlight></codeline>
-<codeline lineno="777"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::regex_match(text.c_str(),<sp/>result,<sp/>option_specifier);</highlight></codeline>
-<codeline lineno="778"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(result.empty())</highlight></codeline>
-<codeline lineno="779"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="780"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;invalid_option_format_error&gt;(text);</highlight></codeline>
-<codeline lineno="781"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="782"><highlight class="normal"></highlight></codeline>
-<codeline lineno="783"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>short_sw<sp/>=<sp/>result[2];</highlight></codeline>
-<codeline lineno="784"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>long_sw<sp/>=<sp/>result[3];</highlight></codeline>
-<codeline lineno="785"><highlight class="normal"></highlight></codeline>
-<codeline lineno="786"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::pair&lt;std::string,<sp/>std::string&gt;(short_sw,<sp/>long_sw);</highlight></codeline>
-<codeline lineno="787"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="788"><highlight class="normal"></highlight></codeline>
-<codeline lineno="789" refid="namespacecxxopts_1_1values_1_1parser__tool_1a0c95fda26d85865d26182d1df061ed8a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc" kindref="compound">ArguDesc</ref><sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a0c95fda26d85865d26182d1df061ed8a" kindref="member">ParseArgument</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*arg,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>&amp;matched)</highlight></codeline>
-<codeline lineno="790"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="791"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::match_results&lt;const<sp/>char*&gt;<sp/>result;</highlight></codeline>
-<codeline lineno="792"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::regex_match(arg,<sp/>result,<sp/>option_matcher);</highlight></codeline>
-<codeline lineno="793"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>matched<sp/>=<sp/>!result.empty();</highlight></codeline>
-<codeline lineno="794"><highlight class="normal"></highlight></codeline>
-<codeline lineno="795"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc" kindref="compound">ArguDesc</ref><sp/>argu_desc;</highlight></codeline>
-<codeline lineno="796"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(matched)<sp/>{</highlight></codeline>
-<codeline lineno="797"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a35ee7f646c94992a633956cfb1807d70" kindref="member">arg_name</ref><sp/>=<sp/>result[1].str();</highlight></codeline>
-<codeline lineno="798"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a2bb71b16c97fa27af41d8d03bca1f06a" kindref="member">set_value</ref><sp/>=<sp/>result[2].length()<sp/>&gt;<sp/>0;</highlight></codeline>
-<codeline lineno="799"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1ac60c40e3b9798897ebbfd76040eb2208" kindref="member">value</ref><sp/>=<sp/>result[3].str();</highlight></codeline>
-<codeline lineno="800"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(result[4].length()<sp/>&gt;<sp/>0)</highlight></codeline>
-<codeline lineno="801"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="802"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a40b774c45dd1737936c205efa87168e4" kindref="member">grouping</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="803"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a35ee7f646c94992a633956cfb1807d70" kindref="member">arg_name</ref><sp/>=<sp/>result[4].str();</highlight></codeline>
-<codeline lineno="804"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="805"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="806"><highlight class="normal"></highlight></codeline>
-<codeline lineno="807"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>argu_desc;</highlight></codeline>
-<codeline lineno="808"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="809"><highlight class="normal"></highlight></codeline>
-<codeline lineno="810"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/><sp/></highlight><highlight class="comment">//<sp/>CXXOPTS_NO_REGEX</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="811"><highlight class="normal"></highlight><highlight class="preprocessor">#undef<sp/>CXXOPTS_NO_REGEX</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="812"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="813"><highlight class="normal"></highlight></codeline>
-<codeline lineno="814" refid="namespacecxxopts_1_1values_1_1detail" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal">detail</highlight></codeline>
-<codeline lineno="815"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="816"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>B&gt;</highlight></codeline>
-<codeline lineno="817" refid="structcxxopts_1_1values_1_1detail_1_1_signed_check" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcxxopts_1_1values_1_1detail_1_1_signed_check" kindref="compound">SignedCheck</ref>;</highlight></codeline>
-<codeline lineno="818"><highlight class="normal"></highlight></codeline>
-<codeline lineno="819"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="820" refid="structcxxopts_1_1values_1_1detail_1_1_signed_check_3_01_t_00_01true_01_4" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcxxopts_1_1values_1_1detail_1_1_signed_check" kindref="compound">SignedCheck</ref>&lt;T,<sp/>true&gt;</highlight></codeline>
-<codeline lineno="821"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="822"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>U&gt;</highlight></codeline>
-<codeline lineno="823"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="824" refid="structcxxopts_1_1values_1_1detail_1_1_signed_check_3_01_t_00_01true_01_4_1a03b02f6c1e500d96c8b8b13cbe858ce4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1detail_1_1_signed_check_3_01_t_00_01true_01_4_1a03b02f6c1e500d96c8b8b13cbe858ce4" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>negative,<sp/>U<sp/>u,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text)</highlight></codeline>
-<codeline lineno="825"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="826"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(negative)</highlight></codeline>
-<codeline lineno="827"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="828"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(u<sp/>&gt;<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">U</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">((std::numeric_limits&lt;T&gt;::min)()))</highlight></codeline>
-<codeline lineno="829"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="830"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="831"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="832"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="833"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="834"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="835"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(u<sp/>&gt;<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">U</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">((std::numeric_limits&lt;T&gt;::max)()))</highlight></codeline>
-<codeline lineno="836"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="837"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="838"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="839"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="840"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="841"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="842"><highlight class="normal"></highlight></codeline>
-<codeline lineno="843"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="844" refid="structcxxopts_1_1values_1_1detail_1_1_signed_check_3_01_t_00_01false_01_4" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcxxopts_1_1values_1_1detail_1_1_signed_check" kindref="compound">SignedCheck</ref>&lt;T,<sp/>false&gt;</highlight></codeline>
-<codeline lineno="845"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="846"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>U&gt;</highlight></codeline>
-<codeline lineno="847"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="848" refid="structcxxopts_1_1values_1_1detail_1_1_signed_check_3_01_t_00_01false_01_4_1a41fbbac7903836954434b45eae60bb44" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1detail_1_1_signed_check_3_01_t_00_01false_01_4_1a41fbbac7903836954434b45eae60bb44" kindref="member">operator()</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal">,<sp/>U,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{}</highlight></codeline>
-<codeline lineno="849"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="850"><highlight class="normal"></highlight></codeline>
-<codeline lineno="851"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>U&gt;</highlight></codeline>
-<codeline lineno="852"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="853" refid="namespacecxxopts_1_1values_1_1detail_1aa76e231a637c53e45ca09e7e87e7ea27" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1_1detail_1aa76e231a637c53e45ca09e7e87e7ea27" kindref="member">check_signed_range</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>negative,<sp/>U<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text)</highlight></codeline>
-<codeline lineno="854"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="855"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1detail_1_1_signed_check" kindref="compound">SignedCheck&lt;T, std::numeric_limits&lt;T&gt;::is_signed</ref>&gt;()(negative,<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>text);</highlight></codeline>
-<codeline lineno="856"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="857"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="comment">//<sp/>namespace<sp/>detail</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="858"><highlight class="normal"></highlight></codeline>
-<codeline lineno="859"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="860"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="861" refid="namespacecxxopts_1_1values_1a49e0fbdea76975c4b740475dd9aec816" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a49e0fbdea76975c4b740475dd9aec816" kindref="member">checked_negate</ref>(R&amp;<sp/>r,<sp/>T&amp;&amp;<sp/>t,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;,<sp/>std::true_type)</highlight></codeline>
-<codeline lineno="862"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="863"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>if<sp/>we<sp/>got<sp/>to<sp/>here,<sp/>then<sp/>`t`<sp/>is<sp/>a<sp/>positive<sp/>number<sp/>that<sp/>fits<sp/>into</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="864"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>`R`.<sp/>So<sp/>to<sp/>avoid<sp/>MSVC<sp/>C4146,<sp/>we<sp/>first<sp/>cast<sp/>it<sp/>to<sp/>`R`.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="865"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>See<sp/>https://github.com/jarro2783/cxxopts/issues/62<sp/>for<sp/>more<sp/>details.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="866"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>r<sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">R</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(-</highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">R</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(t-1)-1);</highlight></codeline>
-<codeline lineno="867"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="868"><highlight class="normal"></highlight></codeline>
-<codeline lineno="869"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="870"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="871" refid="namespacecxxopts_1_1values_1ad346cd7dc5d4d470492c85de801a16b4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a49e0fbdea76975c4b740475dd9aec816" kindref="member">checked_negate</ref>(R&amp;,<sp/>T&amp;&amp;,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text,<sp/>std::false_type)</highlight></codeline>
-<codeline lineno="872"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="873"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="874"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="875"><highlight class="normal"></highlight></codeline>
-<codeline lineno="876"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="877"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="878" refid="namespacecxxopts_1_1values_1a2e205dc91741b7dde43b825da60c9f4c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a2e205dc91741b7dde43b825da60c9f4c" kindref="member">integer_parser</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text,<sp/>T&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>)</highlight></codeline>
-<codeline lineno="879"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="880"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc" kindref="compound">parser_tool::IntegerDesc</ref><sp/>int_desc<sp/>=<sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a7912e06f8258eb2a618ba94a7ede46d4" kindref="member">parser_tool::SplitInteger</ref>(text);</highlight></codeline>
-<codeline lineno="881"><highlight class="normal"></highlight></codeline>
-<codeline lineno="882"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">US<sp/>=<sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::make_unsigned&lt;T&gt;::type;</highlight></codeline>
-<codeline lineno="883"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">constexpr</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>is_signed<sp/>=<sp/>std::numeric_limits&lt;T&gt;::is_signed;</highlight></codeline>
-<codeline lineno="884"><highlight class="normal"></highlight></codeline>
-<codeline lineno="885"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>negative<sp/><sp/><sp/><sp/>=<sp/>int_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a03eb11087b99130f7e098f8b6a3a5f50" kindref="member">negative</ref>.length()<sp/>&gt;<sp/>0;</highlight></codeline>
-<codeline lineno="886"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>uint8_t<sp/><sp/><sp/><sp/><sp/><sp/><sp/>base<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>int_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a382f4c32680ded0fb611303f90ad0425" kindref="member">base</ref>.length()<sp/>&gt;<sp/>0<sp/>?<sp/>16<sp/>:<sp/>10;</highlight></codeline>
-<codeline lineno="887"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;<sp/>value_match<sp/>=<sp/>int_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_integer_desc_1a20ab2c3d23d9210773f377b083e898a4" kindref="member">value</ref>;</highlight></codeline>
-<codeline lineno="888"><highlight class="normal"></highlight></codeline>
-<codeline lineno="889"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>US<sp/>result<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="890"><highlight class="normal"></highlight></codeline>
-<codeline lineno="891"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>ch<sp/>:<sp/>value_match)</highlight></codeline>
-<codeline lineno="892"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="893"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>US<sp/>digit<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="894"><highlight class="normal"></highlight></codeline>
-<codeline lineno="895"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(ch<sp/>&gt;=<sp/></highlight><highlight class="charliteral">&apos;0&apos;</highlight><highlight class="normal"><sp/>&amp;&amp;<sp/>ch<sp/>&lt;=<sp/></highlight><highlight class="charliteral">&apos;9&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="896"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="897"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>digit<sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">US</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(ch<sp/>-<sp/></highlight><highlight class="charliteral">&apos;0&apos;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="898"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="899"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(base<sp/>==<sp/>16<sp/>&amp;&amp;<sp/>ch<sp/>&gt;=<sp/></highlight><highlight class="charliteral">&apos;a&apos;</highlight><highlight class="normal"><sp/>&amp;&amp;<sp/>ch<sp/>&lt;=<sp/></highlight><highlight class="charliteral">&apos;f&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="900"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="901"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>digit<sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">US</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(ch<sp/>-<sp/></highlight><highlight class="charliteral">&apos;a&apos;</highlight><highlight class="normal"><sp/>+<sp/>10);</highlight></codeline>
-<codeline lineno="902"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="903"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(base<sp/>==<sp/>16<sp/>&amp;&amp;<sp/>ch<sp/>&gt;=<sp/></highlight><highlight class="charliteral">&apos;A&apos;</highlight><highlight class="normal"><sp/>&amp;&amp;<sp/>ch<sp/>&lt;=<sp/></highlight><highlight class="charliteral">&apos;F&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="904"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="905"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>digit<sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">US</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(ch<sp/>-<sp/></highlight><highlight class="charliteral">&apos;A&apos;</highlight><highlight class="normal"><sp/>+<sp/>10);</highlight></codeline>
-<codeline lineno="906"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="907"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="908"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="909"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="910"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="911"><highlight class="normal"></highlight></codeline>
-<codeline lineno="912"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>US<sp/>next<sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">US</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(result<sp/>*<sp/>base<sp/>+<sp/>digit);</highlight></codeline>
-<codeline lineno="913"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(result<sp/>&gt;<sp/>next)</highlight></codeline>
-<codeline lineno="914"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="915"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="916"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="917"><highlight class="normal"></highlight></codeline>
-<codeline lineno="918"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>=<sp/>next;</highlight></codeline>
-<codeline lineno="919"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="920"><highlight class="normal"></highlight></codeline>
-<codeline lineno="921"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>detail::check_signed_range&lt;T&gt;(negative,<sp/>result,<sp/>text);</highlight></codeline>
-<codeline lineno="922"><highlight class="normal"></highlight></codeline>
-<codeline lineno="923"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(negative)</highlight></codeline>
-<codeline lineno="924"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="925"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>checked_negate&lt;T&gt;(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>result,<sp/>text,<sp/>std::integral_constant&lt;bool,<sp/>is_signed&gt;());</highlight></codeline>
-<codeline lineno="926"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="927"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="928"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="929"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref><sp/>=<sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="normal">T</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(result);</highlight></codeline>
-<codeline lineno="930"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="931"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="932"><highlight class="normal"></highlight></codeline>
-<codeline lineno="933"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="934" refid="namespacecxxopts_1_1values_1a56fb16f3a09e011db85757491c52691e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1_1values_1a56fb16f3a09e011db85757491c52691e" kindref="member">stringstream_parser</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text,<sp/>T&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>)</highlight></codeline>
-<codeline lineno="935"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="936"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::stringstream<sp/>in(text);</highlight></codeline>
-<codeline lineno="937"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>in<sp/>&gt;&gt;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>;</highlight></codeline>
-<codeline lineno="938"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!in)<sp/>{</highlight></codeline>
-<codeline lineno="939"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="940"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="941"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="942"><highlight class="normal"></highlight></codeline>
-<codeline lineno="943"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T,</highlight></codeline>
-<codeline lineno="944"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::enable_if&lt;std::is_integral&lt;T&gt;::value&gt;::type*<sp/>=<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="945"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&gt;</highlight></codeline>
-<codeline lineno="946" refid="namespacecxxopts_1_1values_1a9782d53713f30ced7138719bd966db2b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1_1values_1a9782d53713f30ced7138719bd966db2b" kindref="member">parse_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text,<sp/>T&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>)</highlight></codeline>
-<codeline lineno="947"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="948"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a2e205dc91741b7dde43b825da60c9f4c" kindref="member">integer_parser</ref>(text,<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>);</highlight></codeline>
-<codeline lineno="949"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="950"><highlight class="normal"></highlight></codeline>
-<codeline lineno="951"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="952"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="953" refid="namespacecxxopts_1_1values_1aaa73e425c1d63db7975dbebd86c2f947" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a9782d53713f30ced7138719bd966db2b" kindref="member">parse_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal">&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>)</highlight></codeline>
-<codeline lineno="954"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="955"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a1b7a1e0063d8f2dd9dc02ada983a1aec" kindref="member">parser_tool::IsTrueText</ref>(text))</highlight></codeline>
-<codeline lineno="956"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="957"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="958"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="959"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="960"><highlight class="normal"></highlight></codeline>
-<codeline lineno="961"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="namespacecxxopts_1_1values_1_1parser__tool_1aef26707302ebd8565487e8d6268c2285" kindref="member">parser_tool::IsFalseText</ref>(text))</highlight></codeline>
-<codeline lineno="962"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="963"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="964"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="965"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="966"><highlight class="normal"></highlight></codeline>
-<codeline lineno="967"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;argument_incorrect_type&gt;(text);</highlight></codeline>
-<codeline lineno="968"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="969"><highlight class="normal"></highlight></codeline>
-<codeline lineno="970"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="971"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="972" refid="namespacecxxopts_1_1values_1a1643e21992e1d5ad5f2012f01f6f6f0a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a9782d53713f30ced7138719bd966db2b" kindref="member">parse_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text,<sp/>std::string&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>)</highlight></codeline>
-<codeline lineno="973"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="974"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref><sp/>=<sp/>text;</highlight></codeline>
-<codeline lineno="975"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="976"><highlight class="normal"></highlight></codeline>
-<codeline lineno="977"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>The<sp/>fallback<sp/>parser.<sp/>It<sp/>uses<sp/>the<sp/>stringstream<sp/>parser<sp/>to<sp/>parse<sp/>all<sp/>types</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="978"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>that<sp/>have<sp/>not<sp/>been<sp/>overloaded<sp/>explicitly.<sp/><sp/>It<sp/>has<sp/>to<sp/>be<sp/>placed<sp/>in<sp/>the</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="979"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>source<sp/>code<sp/>before<sp/>all<sp/>other<sp/>more<sp/>specialized<sp/>templates.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="980"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T,</highlight></codeline>
-<codeline lineno="981"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>std::enable_if&lt;!std::is_integral&lt;T&gt;::value&gt;::type*<sp/>=<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="982"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&gt;</highlight></codeline>
-<codeline lineno="983"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="984"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a9782d53713f30ced7138719bd966db2b" kindref="member">parse_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text,<sp/>T&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="985"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a56fb16f3a09e011db85757491c52691e" kindref="member">stringstream_parser</ref>(text,<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>);</highlight></codeline>
-<codeline lineno="986"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="987"><highlight class="normal"></highlight></codeline>
-<codeline lineno="988"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="989"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="1031"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
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-<codeline lineno="1046"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="1051"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1052"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="1056"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="1064"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(rhs.<ref refid="classcxxopts_1_1values_1_1abstract__value_1a0df330cac57a96d7ac25dd6a666d5b94" kindref="member">m_result</ref>)</highlight></codeline>
-<codeline lineno="1065"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1066"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a0df330cac57a96d7ac25dd6a666d5b94" kindref="member">m_result</ref><sp/>=<sp/>std::make_shared&lt;T&gt;();</highlight></codeline>
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-<codeline lineno="1079"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1080"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="1082"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
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-<codeline lineno="1086"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="1089"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1values_1_1type__is__container" kindref="compound">type_is_container&lt;T&gt;::value</ref>;</highlight></codeline>
-<codeline lineno="1090"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1091"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1092"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="1094"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1095"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a9782d53713f30ced7138719bd966db2b" kindref="member">parse_value</ref>(<ref refid="classcxxopts_1_1values_1_1abstract__value_1a0e3f038dc1c0aeab3e5c517d9e033ee4" kindref="member">m_default_value</ref>,<sp/>*<ref refid="classcxxopts_1_1values_1_1abstract__value_1ab5b256909ddbb516bd46d197dadf073e" kindref="member">m_store</ref>);</highlight></codeline>
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-<codeline lineno="1097"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1098"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="1101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1ad16dfdf6856b66c4ed6b35edfade5218" kindref="member">m_default</ref>;</highlight></codeline>
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-<codeline lineno="1103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1105" refid="classcxxopts_1_1values_1_1abstract__value_1af832b3696ce245e5b4c402ffc5af6155" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1af832b3696ce245e5b4c402ffc5af6155" kindref="member">has_implicit</ref>()</highlight><highlight class="keyword"><sp/>const<sp/>override</highlight></codeline>
-<codeline lineno="1106"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a3f9bdb2d94189ddf78eb5b338d5c33bc" kindref="member">m_implicit</ref>;</highlight></codeline>
-<codeline lineno="1108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
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-<codeline lineno="1113"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1ad16dfdf6856b66c4ed6b35edfade5218" kindref="member">m_default</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
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-<codeline lineno="1116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1118"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
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-<codeline lineno="1123"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>shared_from_this();</highlight></codeline>
-<codeline lineno="1124"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
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-<codeline lineno="1128"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1129"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a3f9bdb2d94189ddf78eb5b338d5c33bc" kindref="member">m_implicit</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>shared_from_this();</highlight></codeline>
-<codeline lineno="1131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1132"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string</highlight></codeline>
-<codeline lineno="1134" refid="classcxxopts_1_1values_1_1abstract__value_1a901928871ef3566e74f081d5ab9020aa" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a901928871ef3566e74f081d5ab9020aa" kindref="member">get_default_value</ref>()</highlight><highlight class="keyword"><sp/>const<sp/>override</highlight></codeline>
-<codeline lineno="1135"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1136"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a0e3f038dc1c0aeab3e5c517d9e033ee4" kindref="member">m_default_value</ref>;</highlight></codeline>
-<codeline lineno="1137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1138"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string</highlight></codeline>
-<codeline lineno="1140" refid="classcxxopts_1_1values_1_1abstract__value_1a5e5aa0e29056c3daa7e5a1defd69f20f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a5e5aa0e29056c3daa7e5a1defd69f20f" kindref="member">get_implicit_value</ref>()</highlight><highlight class="keyword"><sp/>const<sp/>override</highlight></codeline>
-<codeline lineno="1141"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1142"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a69ed02e5ce2c431fad801ed5bb1cde26" kindref="member">m_implicit_value</ref>;</highlight></codeline>
-<codeline lineno="1143"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1144"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1146" refid="classcxxopts_1_1values_1_1abstract__value_1ac4a5f57c63086de1eac4cbefe09d99ce" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1ac4a5f57c63086de1eac4cbefe09d99ce" kindref="member">is_boolean</ref>()</highlight><highlight class="keyword"><sp/>const<sp/>override</highlight></codeline>
-<codeline lineno="1147"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::is_same&lt;T,<sp/>bool&gt;::value;</highlight></codeline>
-<codeline lineno="1149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1150"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T&amp;</highlight></codeline>
-<codeline lineno="1152" refid="classcxxopts_1_1values_1_1abstract__value_1a13587e25582d606cd757d3ad5a4df3b9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a13587e25582d606cd757d3ad5a4df3b9" kindref="member">get</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1153"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1values_1_1abstract__value_1ab5b256909ddbb516bd46d197dadf073e" kindref="member">m_store</ref><sp/>==<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*<ref refid="classcxxopts_1_1values_1_1abstract__value_1a0df330cac57a96d7ac25dd6a666d5b94" kindref="member">m_result</ref>;</highlight></codeline>
-<codeline lineno="1157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*<ref refid="classcxxopts_1_1values_1_1abstract__value_1ab5b256909ddbb516bd46d197dadf073e" kindref="member">m_store</ref>;</highlight></codeline>
-<codeline lineno="1159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1161"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1162" refid="classcxxopts_1_1values_1_1abstract__value_1a0df330cac57a96d7ac25dd6a666d5b94" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;T&gt;<sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a0df330cac57a96d7ac25dd6a666d5b94" kindref="member">m_result</ref>{};</highlight></codeline>
-<codeline lineno="1163" refid="classcxxopts_1_1values_1_1abstract__value_1ab5b256909ddbb516bd46d197dadf073e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>T*<sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1ab5b256909ddbb516bd46d197dadf073e" kindref="member">m_store</ref>{};</highlight></codeline>
-<codeline lineno="1164"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1165" refid="classcxxopts_1_1values_1_1abstract__value_1ad16dfdf6856b66c4ed6b35edfade5218" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1ad16dfdf6856b66c4ed6b35edfade5218" kindref="member">m_default</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
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-<codeline lineno="1167"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1168" refid="classcxxopts_1_1values_1_1abstract__value_1a0e3f038dc1c0aeab3e5c517d9e033ee4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a0e3f038dc1c0aeab3e5c517d9e033ee4" kindref="member">m_default_value</ref>{};</highlight></codeline>
-<codeline lineno="1169" refid="classcxxopts_1_1values_1_1abstract__value_1a69ed02e5ce2c431fad801ed5bb1cde26" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a69ed02e5ce2c431fad801ed5bb1cde26" kindref="member">m_implicit_value</ref>{};</highlight></codeline>
-<codeline lineno="1170"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1171"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1172"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
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-<codeline lineno="1174"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1175"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1values_1_1abstract__value" kindref="compound">abstract_value</ref>&lt;T&gt;<ref refid="classcxxopts_1_1values_1_1abstract__value_1abaf85af44d7de0d08508ea50c911062f" kindref="member">::abstract_value</ref>;</highlight></codeline>
-<codeline lineno="1177"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="1180" refid="classcxxopts_1_1values_1_1standard__value_1acf40716827c2c2dfab62154db42bfe9a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1standard__value_1acf40716827c2c2dfab62154db42bfe9a" kindref="member">clone</ref>()</highlight><highlight class="keyword"><sp/>const<sp/>override</highlight></codeline>
-<codeline lineno="1181"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::make_shared&lt;standard_value&lt;T&gt;&gt;(*this);</highlight></codeline>
-<codeline lineno="1183"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1184"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1185"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1186"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;&gt;</highlight></codeline>
-<codeline lineno="1187" refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1values_1_1standard__value" kindref="compound">standard_value</ref>&lt;bool&gt;<sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value" kindref="compound">abstract_value</ref>&lt;bool&gt;</highlight></codeline>
-<codeline lineno="1188"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1190" refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1a6c8c8a456e2deda84f26939f0335fe8c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1a6c8c8a456e2deda84f26939f0335fe8c" kindref="member">~standard_value</ref>()<sp/></highlight><highlight class="keyword">override</highlight><highlight class="normal"><sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1192" refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1a47718a070233f5c631b433979fdf808e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1a47718a070233f5c631b433979fdf808e" kindref="member">standard_value</ref>()</highlight></codeline>
-<codeline lineno="1193"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>set_default_and_implicit();</highlight></codeline>
-<codeline lineno="1195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1197" refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1aa5c0c7c48a5f27ef5ce821970a0ced94" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1aa5c0c7c48a5f27ef5ce821970a0ced94" kindref="member">standard_value</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal">*<sp/>b)</highlight></codeline>
-<codeline lineno="1198"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1values_1_1abstract__value" kindref="compound">abstract_value</ref>(b)</highlight></codeline>
-<codeline lineno="1199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>set_default_and_implicit();</highlight></codeline>
-<codeline lineno="1201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1202"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="1204" refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1a046e7e94db4d7ec50c031a3078733f67" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1a046e7e94db4d7ec50c031a3078733f67" kindref="member">clone</ref>()</highlight><highlight class="keyword"><sp/>const<sp/>override</highlight></codeline>
-<codeline lineno="1205"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::make_shared&lt;standard_value&lt;bool&gt;&gt;(*this);</highlight></codeline>
-<codeline lineno="1207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1208"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1212" refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1a2f0911fd51e2bec0f6409806ccb0ec47" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1standard__value_3_01bool_01_4_1a2f0911fd51e2bec0f6409806ccb0ec47" kindref="member">set_default_and_implicit</ref>()</highlight></codeline>
-<codeline lineno="1213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1ad16dfdf6856b66c4ed6b35edfade5218" kindref="member">m_default</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a0e3f038dc1c0aeab3e5c517d9e033ee4" kindref="member">m_default_value</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;false&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a3f9bdb2d94189ddf78eb5b338d5c33bc" kindref="member">m_implicit</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1values_1_1abstract__value_1a69ed02e5ce2c431fad801ed5bb1cde26" kindref="member">m_implicit_value</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;true&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1219"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1220"><highlight class="normal"><sp/><sp/>}<sp/></highlight><highlight class="comment">//<sp/>namespace<sp/>values</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1221"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1222"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="1223"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="1224" refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>()</highlight></codeline>
-<codeline lineno="1225"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1226"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::make_shared&lt;values::standard_value&lt;T&gt;&gt;();</highlight></codeline>
-<codeline lineno="1227"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1228"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1229"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="1230"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="1231" refid="namespacecxxopts_1a9a3c999d4e9bd55dec5daa5daef79c26" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>(T&amp;<sp/>t)</highlight></codeline>
-<codeline lineno="1232"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1233"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::make_shared&lt;values::standard_value&lt;T&gt;&gt;(&amp;t);</highlight></codeline>
-<codeline lineno="1234"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1235"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1236"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">OptionAdder;</highlight></codeline>
-<codeline lineno="1237"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1238" refid="classcxxopts_1_1_option_details" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_option_details" kindref="compound">OptionDetails</ref></highlight></codeline>
-<codeline lineno="1239"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1240"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1241" refid="classcxxopts_1_1_option_details_1a7c85e740b5d1c8e61d7711dd57de7568" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a7c85e740b5d1c8e61d7711dd57de7568" kindref="member">OptionDetails</ref></highlight></codeline>
-<codeline lineno="1242"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>short_,</highlight></codeline>
-<codeline lineno="1244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>long_,</highlight></codeline>
-<codeline lineno="1245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>desc,</highlight></codeline>
-<codeline lineno="1246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;const<sp/>Value&gt;<sp/>val</highlight></codeline>
-<codeline lineno="1247"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="1248"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_details_1a4454eb1ffedcf5656ab408da51542dad" kindref="member">m_short</ref>(std::move(short_))</highlight></codeline>
-<codeline lineno="1249"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_option_details_1a15317e92ab6acd722736d8a6ef0dfab0" kindref="member">m_long</ref>(std::move(long_))</highlight></codeline>
-<codeline lineno="1250"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_option_details_1aa34bf6a94eeb9b914b96344f52519e16" kindref="member">m_desc</ref>(std::move(desc))</highlight></codeline>
-<codeline lineno="1251"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_option_details_1af610b82c4f86648ac54c7d2b2639e7c0" kindref="member">m_value</ref>(std::move(val))</highlight></codeline>
-<codeline lineno="1252"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_option_details_1abe72cc1db4b05a00bd777badafe3a322" kindref="member">m_count</ref>(0)</highlight></codeline>
-<codeline lineno="1253"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a97cd0d8b6131ee989815bc0abe1fbedf" kindref="member">m_hash</ref><sp/>=<sp/>std::hash&lt;std::string&gt;{}(<ref refid="classcxxopts_1_1_option_details_1a15317e92ab6acd722736d8a6ef0dfab0" kindref="member">m_long</ref><sp/>+<sp/><ref refid="classcxxopts_1_1_option_details_1a4454eb1ffedcf5656ab408da51542dad" kindref="member">m_short</ref>);</highlight></codeline>
-<codeline lineno="1255"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1256"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1257" refid="classcxxopts_1_1_option_details_1a5837c0d007fd729347f594b1227648be" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a5837c0d007fd729347f594b1227648be" kindref="member">OptionDetails</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_details" kindref="compound">OptionDetails</ref>&amp;<sp/>rhs)</highlight></codeline>
-<codeline lineno="1258"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_details_1aa34bf6a94eeb9b914b96344f52519e16" kindref="member">m_desc</ref>(rhs.<ref refid="classcxxopts_1_1_option_details_1aa34bf6a94eeb9b914b96344f52519e16" kindref="member">m_desc</ref>)</highlight></codeline>
-<codeline lineno="1259"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_option_details_1af610b82c4f86648ac54c7d2b2639e7c0" kindref="member">m_value</ref>(rhs.<ref refid="classcxxopts_1_1_option_details_1af610b82c4f86648ac54c7d2b2639e7c0" kindref="member">m_value</ref>-&gt;clone())</highlight></codeline>
-<codeline lineno="1260"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_option_details_1abe72cc1db4b05a00bd777badafe3a322" kindref="member">m_count</ref>(rhs.<ref refid="classcxxopts_1_1_option_details_1abe72cc1db4b05a00bd777badafe3a322" kindref="member">m_count</ref>)</highlight></codeline>
-<codeline lineno="1261"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1262"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1263"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1264" refid="classcxxopts_1_1_option_details_1aecc7516afb809f71032168cbc5ee4036" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1aecc7516afb809f71032168cbc5ee4036" kindref="member">OptionDetails</ref>(<ref refid="classcxxopts_1_1_option_details" kindref="compound">OptionDetails</ref>&amp;&amp;<sp/>rhs)<sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1265"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1266"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1267"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;</highlight></codeline>
-<codeline lineno="1268" refid="classcxxopts_1_1_option_details_1a44fbe142fd8355c93509726b0dafcc51" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a44fbe142fd8355c93509726b0dafcc51" kindref="member">description</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1269"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_details_1aa34bf6a94eeb9b914b96344f52519e16" kindref="member">m_desc</ref>;</highlight></codeline>
-<codeline lineno="1271"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1272"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1273"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1274"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_value" kindref="compound">Value</ref>&amp;</highlight></codeline>
-<codeline lineno="1275" refid="classcxxopts_1_1_option_details_1a3f90596c7b7634449a51370f211163a8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a3f90596c7b7634449a51370f211163a8" kindref="member">value</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*<ref refid="classcxxopts_1_1_option_details_1af610b82c4f86648ac54c7d2b2639e7c0" kindref="member">m_value</ref>;</highlight></codeline>
-<codeline lineno="1277"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1278"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1279"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1280"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;Value&gt;</highlight></codeline>
-<codeline lineno="1281" refid="classcxxopts_1_1_option_details_1a3ff160262711ae6eebb41649491e75e6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a3ff160262711ae6eebb41649491e75e6" kindref="member">make_storage</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1282"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_details_1af610b82c4f86648ac54c7d2b2639e7c0" kindref="member">m_value</ref>-&gt;clone();</highlight></codeline>
-<codeline lineno="1284"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1285"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1286"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1287"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;</highlight></codeline>
-<codeline lineno="1288" refid="classcxxopts_1_1_option_details_1a814a9b4b5d3bfc6324c10c7b92a87bef" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a814a9b4b5d3bfc6324c10c7b92a87bef" kindref="member">short_name</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1289"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_details_1a4454eb1ffedcf5656ab408da51542dad" kindref="member">m_short</ref>;</highlight></codeline>
-<codeline lineno="1291"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1292"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1293"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1294"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;</highlight></codeline>
-<codeline lineno="1295" refid="classcxxopts_1_1_option_details_1a4af4381fab0419f9d032d1eb43e71b1b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a4af4381fab0419f9d032d1eb43e71b1b" kindref="member">long_name</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1296"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1297"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_details_1a15317e92ab6acd722736d8a6ef0dfab0" kindref="member">m_long</ref>;</highlight></codeline>
-<codeline lineno="1298"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1299"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1300"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1301" refid="classcxxopts_1_1_option_details_1a8e2ae6185e06695a933367137574817e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_details_1a8e2ae6185e06695a933367137574817e" kindref="member">hash</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1302"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_details_1a97cd0d8b6131ee989815bc0abe1fbedf" kindref="member">m_hash</ref>;</highlight></codeline>
-<codeline lineno="1304"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1305"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1306"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1307" refid="classcxxopts_1_1_option_details_1a4454eb1ffedcf5656ab408da51542dad" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_option_details_1a4454eb1ffedcf5656ab408da51542dad" kindref="member">m_short</ref>{};</highlight></codeline>
-<codeline lineno="1308" refid="classcxxopts_1_1_option_details_1a15317e92ab6acd722736d8a6ef0dfab0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_option_details_1a15317e92ab6acd722736d8a6ef0dfab0" kindref="member">m_long</ref>{};</highlight></codeline>
-<codeline lineno="1309" refid="classcxxopts_1_1_option_details_1aa34bf6a94eeb9b914b96344f52519e16" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/><ref refid="classcxxopts_1_1_option_details_1aa34bf6a94eeb9b914b96344f52519e16" kindref="member">m_desc</ref>{};</highlight></codeline>
-<codeline lineno="1310" refid="classcxxopts_1_1_option_details_1af610b82c4f86648ac54c7d2b2639e7c0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;const<sp/>Value&gt;<sp/><ref refid="classcxxopts_1_1_option_details_1af610b82c4f86648ac54c7d2b2639e7c0" kindref="member">m_value</ref>{};</highlight></codeline>
-<codeline lineno="1311" refid="classcxxopts_1_1_option_details_1abe72cc1db4b05a00bd777badafe3a322" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_details_1abe72cc1db4b05a00bd777badafe3a322" kindref="member">m_count</ref>;</highlight></codeline>
-<codeline lineno="1312"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1313" refid="classcxxopts_1_1_option_details_1a97cd0d8b6131ee989815bc0abe1fbedf" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_details_1a97cd0d8b6131ee989815bc0abe1fbedf" kindref="member">m_hash</ref>{};</highlight></codeline>
-<codeline lineno="1314"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1315"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1316" refid="structcxxopts_1_1_help_option_details" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcxxopts_1_1_help_option_details" kindref="compound">HelpOptionDetails</ref></highlight></codeline>
-<codeline lineno="1317"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1318" refid="structcxxopts_1_1_help_option_details_1a83cb4bc76deb1d40c89de4165e4b0cdc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_help_option_details_1a83cb4bc76deb1d40c89de4165e4b0cdc" kindref="member">s</ref>;</highlight></codeline>
-<codeline lineno="1319" refid="structcxxopts_1_1_help_option_details_1a19a4fe10f8a5b47ec8e2134bea26aabe" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_help_option_details_1a19a4fe10f8a5b47ec8e2134bea26aabe" kindref="member">l</ref>;</highlight></codeline>
-<codeline lineno="1320" refid="structcxxopts_1_1_help_option_details_1a7c83455289612b05713b87154877caec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/><ref refid="structcxxopts_1_1_help_option_details_1a7c83455289612b05713b87154877caec" kindref="member">desc</ref>;</highlight></codeline>
-<codeline lineno="1321" refid="structcxxopts_1_1_help_option_details_1ac869dd2ac03fc090f34bce1907f5edd5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1_help_option_details_1ac869dd2ac03fc090f34bce1907f5edd5" kindref="member">has_default</ref>;</highlight></codeline>
-<codeline lineno="1322" refid="structcxxopts_1_1_help_option_details_1aa59a81e78fb7e785dd8b61ab21233db8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_help_option_details_1aa59a81e78fb7e785dd8b61ab21233db8" kindref="member">default_value</ref>;</highlight></codeline>
-<codeline lineno="1323" refid="structcxxopts_1_1_help_option_details_1ad9ddbdca27930394f32b51f7bf3b1748" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1_help_option_details_1ad9ddbdca27930394f32b51f7bf3b1748" kindref="member">has_implicit</ref>;</highlight></codeline>
-<codeline lineno="1324" refid="structcxxopts_1_1_help_option_details_1a21114f51515edf454e214f3c881ae212" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_help_option_details_1a21114f51515edf454e214f3c881ae212" kindref="member">implicit_value</ref>;</highlight></codeline>
-<codeline lineno="1325" refid="structcxxopts_1_1_help_option_details_1a61afda425e73f688a21eae557efa8f25" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_help_option_details_1a61afda425e73f688a21eae557efa8f25" kindref="member">arg_help</ref>;</highlight></codeline>
-<codeline lineno="1326" refid="structcxxopts_1_1_help_option_details_1a68e51f91246958b2e3e84d0178a55afe" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1_help_option_details_1a68e51f91246958b2e3e84d0178a55afe" kindref="member">is_container</ref>;</highlight></codeline>
-<codeline lineno="1327" refid="structcxxopts_1_1_help_option_details_1ae9edda8b102865694f3b76ef162f0ead" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1_help_option_details_1ae9edda8b102865694f3b76ef162f0ead" kindref="member">is_boolean</ref>;</highlight></codeline>
-<codeline lineno="1328"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1329"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1330" refid="structcxxopts_1_1_help_group_details" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcxxopts_1_1_help_group_details" kindref="compound">HelpGroupDetails</ref></highlight></codeline>
-<codeline lineno="1331"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1332" refid="structcxxopts_1_1_help_group_details_1abc389252a862724a1404d3c22fda6fc2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_help_group_details_1abc389252a862724a1404d3c22fda6fc2" kindref="member">name</ref>{};</highlight></codeline>
-<codeline lineno="1333" refid="structcxxopts_1_1_help_group_details_1a42db1cc0f95adbda0b1d73ca54ffb468" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_help_group_details_1a42db1cc0f95adbda0b1d73ca54ffb468" kindref="member">description</ref>{};</highlight></codeline>
-<codeline lineno="1334" refid="structcxxopts_1_1_help_group_details_1ab2869d214c7fc9ac859d030afca33243" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;HelpOptionDetails&gt;<sp/><ref refid="structcxxopts_1_1_help_group_details_1ab2869d214c7fc9ac859d030afca33243" kindref="member">options</ref>{};</highlight></codeline>
-<codeline lineno="1335"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1336"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1337" refid="classcxxopts_1_1_option_value" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_option_value" kindref="compound">OptionValue</ref></highlight></codeline>
-<codeline lineno="1338"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1339"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1340"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1341" refid="classcxxopts_1_1_option_value_1a69645a46405198eea09f45137f1bcf8b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a69645a46405198eea09f45137f1bcf8b" kindref="member">parse</ref></highlight></codeline>
-<codeline lineno="1342"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;const<sp/>OptionDetails&gt;&amp;<sp/>details,</highlight></codeline>
-<codeline lineno="1344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>text</highlight></codeline>
-<codeline lineno="1345"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="1346"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a5e62e7e64679e627ba8946c36a559f2a" kindref="member">ensure_value</ref>(details);</highlight></codeline>
-<codeline lineno="1348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++<ref refid="classcxxopts_1_1_option_value_1a1c8d74b5c22ef6350d3a2350c76c6613" kindref="member">m_count</ref>;</highlight></codeline>
-<codeline lineno="1349"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a4bbafc7ad74075d05aebd5ddc18d83cd" kindref="member">m_value</ref>-&gt;parse(text);</highlight></codeline>
-<codeline lineno="1350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a2045cf1795fee8b9860e1b7a8dd00023" kindref="member">m_long_name</ref><sp/>=<sp/>&amp;details-&gt;long_name();</highlight></codeline>
-<codeline lineno="1351"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1352"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1353"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1354" refid="classcxxopts_1_1_option_value_1a58f4dc95f2a36c01f64c026baae6795f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a58f4dc95f2a36c01f64c026baae6795f" kindref="member">parse_default</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;const<sp/>OptionDetails&gt;&amp;<sp/>details)</highlight></codeline>
-<codeline lineno="1355"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a5e62e7e64679e627ba8946c36a559f2a" kindref="member">ensure_value</ref>(details);</highlight></codeline>
-<codeline lineno="1357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a4b65034339c40c08656fa674680d99e1" kindref="member">m_default</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a2045cf1795fee8b9860e1b7a8dd00023" kindref="member">m_long_name</ref><sp/>=<sp/>&amp;details-&gt;long_name();</highlight></codeline>
-<codeline lineno="1359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a4bbafc7ad74075d05aebd5ddc18d83cd" kindref="member">m_value</ref>-&gt;parse();</highlight></codeline>
-<codeline lineno="1360"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1361"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1362"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1363" refid="classcxxopts_1_1_option_value_1a85af628f49023ea63e1983d1f350cb34" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a85af628f49023ea63e1983d1f350cb34" kindref="member">parse_no_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;const<sp/>OptionDetails&gt;&amp;<sp/>details)</highlight></codeline>
-<codeline lineno="1364"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a2045cf1795fee8b9860e1b7a8dd00023" kindref="member">m_long_name</ref><sp/>=<sp/>&amp;details-&gt;long_name();</highlight></codeline>
-<codeline lineno="1366"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1367"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1368"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined(CXXOPTS_NULL_DEREF_IGNORE)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1369"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>push</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1370"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>ignored<sp/>&quot;-Wnull-dereference&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1371"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1372"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1373"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1374"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1375" refid="classcxxopts_1_1_option_value_1a69580b01f01453434ebd95f0bf2e8c85" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a69580b01f01453434ebd95f0bf2e8c85" kindref="member">count</ref>()<sp/>const<sp/>noexcept</highlight></codeline>
-<codeline lineno="1376"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1377"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_value_1a1c8d74b5c22ef6350d3a2350c76c6613" kindref="member">m_count</ref>;</highlight></codeline>
-<codeline lineno="1378"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1379"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1380"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined(CXXOPTS_NULL_DEREF_IGNORE)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1381"><highlight class="normal"></highlight><highlight class="preprocessor">#pragma<sp/>GCC<sp/>diagnostic<sp/>pop</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1382"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1383"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1384"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>TODO:<sp/>maybe<sp/>default<sp/>options<sp/>should<sp/>count<sp/>towards<sp/>the<sp/>number<sp/>of<sp/>arguments</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1385"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1386"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1387" refid="classcxxopts_1_1_option_value_1ab36579e07e3f29af87aa870f996a7906" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1ab36579e07e3f29af87aa870f996a7906" kindref="member">has_default</ref>()<sp/>const<sp/>noexcept</highlight></codeline>
-<codeline lineno="1388"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1389"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_value_1a4b65034339c40c08656fa674680d99e1" kindref="member">m_default</ref>;</highlight></codeline>
-<codeline lineno="1390"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1391"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1392"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="1393"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>T&amp;</highlight></codeline>
-<codeline lineno="1394" refid="classcxxopts_1_1_option_value_1a6953817ba21f573f4c305bda31084d1b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a6953817ba21f573f4c305bda31084d1b" kindref="member">as</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1395"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1_option_value_1a4bbafc7ad74075d05aebd5ddc18d83cd" kindref="member">m_value</ref><sp/>==<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="1397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_has_no_value_exception&gt;(</highlight></codeline>
-<codeline lineno="1398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a2045cf1795fee8b9860e1b7a8dd00023" kindref="member">m_long_name</ref><sp/>==<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal"><sp/>?<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"><sp/>:<sp/>*<ref refid="classcxxopts_1_1_option_value_1a2045cf1795fee8b9860e1b7a8dd00023" kindref="member">m_long_name</ref>);</highlight></codeline>
-<codeline lineno="1399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1400"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1401"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>CXXOPTS_NO_RTTI</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static_cast&lt;</highlight><highlight class="keyword">const<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1values_1_1standard__value" kindref="compound">values::standard_value&lt;T&gt;</ref>&amp;</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(*m_value).<ref refid="classcxxopts_1_1values_1_1abstract__value_1a13587e25582d606cd757d3ad5a4df3b9" kindref="member">get</ref>();</highlight></codeline>
-<codeline lineno="1403"><highlight class="normal"></highlight><highlight class="preprocessor">#else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">dynamic_cast&lt;</highlight><highlight class="keyword">const<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1values_1_1standard__value" kindref="compound">values::standard_value&lt;T&gt;</ref>&amp;</highlight><highlight class="keyword">&gt;</highlight><highlight class="normal">(*m_value).<ref refid="classcxxopts_1_1values_1_1abstract__value_1a13587e25582d606cd757d3ad5a4df3b9" kindref="member">get</ref>();</highlight></codeline>
-<codeline lineno="1405"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1406"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1407"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1408"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1409"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1410" refid="classcxxopts_1_1_option_value_1a5e62e7e64679e627ba8946c36a559f2a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a5e62e7e64679e627ba8946c36a559f2a" kindref="member">ensure_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;const<sp/>OptionDetails&gt;&amp;<sp/>details)</highlight></codeline>
-<codeline lineno="1411"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1_option_value_1a4bbafc7ad74075d05aebd5ddc18d83cd" kindref="member">m_value</ref><sp/>==<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_value_1a4bbafc7ad74075d05aebd5ddc18d83cd" kindref="member">m_value</ref><sp/>=<sp/>details-&gt;make_storage();</highlight></codeline>
-<codeline lineno="1415"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1416"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1417"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1418"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1419" refid="classcxxopts_1_1_option_value_1a2045cf1795fee8b9860e1b7a8dd00023" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string*<sp/><ref refid="classcxxopts_1_1_option_value_1a2045cf1795fee8b9860e1b7a8dd00023" kindref="member">m_long_name</ref><sp/>=<sp/></highlight><highlight class="keyword">nullptr</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1420"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Holding<sp/>this<sp/>pointer<sp/>is<sp/>safe,<sp/>since<sp/>OptionValue&apos;s<sp/>only<sp/>exist<sp/>in<sp/>key-value<sp/>pairs,</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1421"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>where<sp/>the<sp/>key<sp/>has<sp/>the<sp/>string<sp/>we<sp/>point<sp/>to.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1422" refid="classcxxopts_1_1_option_value_1a4bbafc7ad74075d05aebd5ddc18d83cd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;Value&gt;<sp/><ref refid="classcxxopts_1_1_option_value_1a4bbafc7ad74075d05aebd5ddc18d83cd" kindref="member">m_value</ref>{};</highlight></codeline>
-<codeline lineno="1423" refid="classcxxopts_1_1_option_value_1a1c8d74b5c22ef6350d3a2350c76c6613" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_value_1a1c8d74b5c22ef6350d3a2350c76c6613" kindref="member">m_count</ref><sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="1424" refid="classcxxopts_1_1_option_value_1a4b65034339c40c08656fa674680d99e1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_value_1a4b65034339c40c08656fa674680d99e1" kindref="member">m_default</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1425"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1426"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1427" refid="classcxxopts_1_1_key_value" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_key_value" kindref="compound">KeyValue</ref></highlight></codeline>
-<codeline lineno="1428"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1429"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1430" refid="classcxxopts_1_1_key_value_1aa517bd30c2c0071cc76f6e7244da5f2f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_key_value_1aa517bd30c2c0071cc76f6e7244da5f2f" kindref="member">KeyValue</ref>(std::string<sp/>key_,<sp/>std::string<sp/>value_)</highlight></codeline>
-<codeline lineno="1431"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_key_value_1a178a9b3f09d6cd186ada7254b8650401" kindref="member">m_key</ref>(std::move(key_))</highlight></codeline>
-<codeline lineno="1432"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_key_value_1adca1ff7f66e9f29f7a59e8c2c8a7b4d3" kindref="member">m_value</ref>(std::move(value_))</highlight></codeline>
-<codeline lineno="1433"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1434"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1435"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1436"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1437"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;</highlight></codeline>
-<codeline lineno="1438" refid="classcxxopts_1_1_key_value_1a07faf052403faa9e2abd10a1adbf6e9c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_key_value_1a07faf052403faa9e2abd10a1adbf6e9c" kindref="member">key</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1439"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1440"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_key_value_1a178a9b3f09d6cd186ada7254b8650401" kindref="member">m_key</ref>;</highlight></codeline>
-<codeline lineno="1441"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1442"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1443"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="cxxopts_8_h_1a6d9ad4f693e16a4c6cdce8373f403e5d" kindref="member">CXXOPTS_NODISCARD</ref></highlight></codeline>
-<codeline lineno="1444"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;</highlight></codeline>
-<codeline lineno="1445" refid="classcxxopts_1_1_key_value_1a6d647e665fee87204926a244fe94e343" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_key_value_1a6d647e665fee87204926a244fe94e343" kindref="member">value</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1446"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_key_value_1adca1ff7f66e9f29f7a59e8c2c8a7b4d3" kindref="member">m_value</ref>;</highlight></codeline>
-<codeline lineno="1448"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1449"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1450"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>T&gt;</highlight></codeline>
-<codeline lineno="1451"><highlight class="normal"><sp/><sp/><sp/><sp/>T</highlight></codeline>
-<codeline lineno="1452" refid="classcxxopts_1_1_key_value_1af8c51b8c5fb52c8cb23c0437af2375ff" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_key_value_1af8c51b8c5fb52c8cb23c0437af2375ff" kindref="member">as</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1453"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1454"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>T<sp/>result;</highlight></codeline>
-<codeline lineno="1455"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1a9782d53713f30ced7138719bd966db2b" kindref="member">values::parse_value</ref>(<ref refid="classcxxopts_1_1_key_value_1adca1ff7f66e9f29f7a59e8c2c8a7b4d3" kindref="member">m_value</ref>,<sp/>result);</highlight></codeline>
-<codeline lineno="1456"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>result;</highlight></codeline>
-<codeline lineno="1457"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1458"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1459"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1460" refid="classcxxopts_1_1_key_value_1a178a9b3f09d6cd186ada7254b8650401" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_key_value_1a178a9b3f09d6cd186ada7254b8650401" kindref="member">m_key</ref>;</highlight></codeline>
-<codeline lineno="1461" refid="classcxxopts_1_1_key_value_1adca1ff7f66e9f29f7a59e8c2c8a7b4d3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_key_value_1adca1ff7f66e9f29f7a59e8c2c8a7b4d3" kindref="member">m_value</ref>;</highlight></codeline>
-<codeline lineno="1462"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1463"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1464" refid="namespacecxxopts_1a53a2c0afe2f23b85f2e880e3844f6232" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts_1a53a2c0afe2f23b85f2e880e3844f6232" kindref="member">ParsedHashMap</ref><sp/>=<sp/>std::unordered_map&lt;size_t,<sp/>OptionValue&gt;;</highlight></codeline>
-<codeline lineno="1465" refid="namespacecxxopts_1a6cb0a4c694ab5bb7096323b810b797f3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts_1a6cb0a4c694ab5bb7096323b810b797f3" kindref="member">NameHashMap</ref><sp/>=<sp/>std::unordered_map&lt;std::string,<sp/>size_t&gt;;</highlight></codeline>
-<codeline lineno="1466"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1467" refid="classcxxopts_1_1_parse_result" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref></highlight></codeline>
-<codeline lineno="1468"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1469"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1470" refid="classcxxopts_1_1_parse_result_1_1_iterator" refkind="compound"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref></highlight></codeline>
-<codeline lineno="1471"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1472"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1473" refid="classcxxopts_1_1_parse_result_1_1_iterator_1a028a7211e9afba85510fbeff708a877c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a028a7211e9afba85510fbeff708a877c" kindref="member">iterator_category</ref><sp/>=<sp/>std::forward_iterator_tag;</highlight></codeline>
-<codeline lineno="1474" refid="classcxxopts_1_1_parse_result_1_1_iterator_1ad415f3d6f28ec474a22a90bda79dc668" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_key_value" kindref="compound">value_type</ref><sp/>=<sp/><ref refid="classcxxopts_1_1_key_value" kindref="compound">KeyValue</ref>;</highlight></codeline>
-<codeline lineno="1475" refid="classcxxopts_1_1_parse_result_1_1_iterator_1a4802fe1708a301c4be98b423f2823fe3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a4802fe1708a301c4be98b423f2823fe3" kindref="member">difference_type</ref><sp/>=<sp/>void;</highlight></codeline>
-<codeline lineno="1476" refid="classcxxopts_1_1_parse_result_1_1_iterator_1adc569db0768e1ac98ca5fec44b2c8f55" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_key_value" kindref="compound">pointer</ref><sp/>=<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_key_value" kindref="compound">KeyValue</ref>*;</highlight></codeline>
-<codeline lineno="1477" refid="classcxxopts_1_1_parse_result_1_1_iterator_1a4d8cab1503154a28ff6adc5198114374" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_key_value" kindref="compound">reference</ref><sp/>=<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_key_value" kindref="compound">KeyValue</ref>&amp;;</highlight></codeline>
-<codeline lineno="1478"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1479" refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab661290b7e3d0e3f9b9b2b986f26c3fd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab661290b7e3d0e3f9b9b2b986f26c3fd" kindref="member">Iterator</ref>()<sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1480" refid="classcxxopts_1_1_parse_result_1_1_iterator_1a4271f7d62fcb221672696eb557a8774d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a4271f7d62fcb221672696eb557a8774d" kindref="member">Iterator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref>&amp;)<sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1481"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1482" refid="classcxxopts_1_1_parse_result_1_1_iterator_1ac0c22d6b5b8fb9723309b772a9fa12cd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ac0c22d6b5b8fb9723309b772a9fa12cd" kindref="member">Iterator</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref><sp/>*pr,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1a63ac972d67d59d5d6f2b6810ee1ad3c3" kindref="member">end</ref>=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1483"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a0abfc80c0ca5c6d714df8a03e757516e" kindref="member">m_pr</ref>(pr)</highlight></codeline>
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-<codeline lineno="1486"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1487"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1488" refid="classcxxopts_1_1_parse_result_1_1_iterator_1a1b09a554a633442a754486bf0058dd65" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref>&amp;<sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a1b09a554a633442a754486bf0058dd65" kindref="member">operator++</ref>()</highlight></codeline>
-<codeline lineno="1489"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1490"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++<ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" kindref="member">m_iter</ref>;</highlight></codeline>
-<codeline lineno="1491"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(<ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" kindref="member">m_iter</ref><sp/>==<sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a0abfc80c0ca5c6d714df8a03e757516e" kindref="member">m_pr</ref>-&gt;<ref refid="classcxxopts_1_1_parse_result_1ab9d7bcfd12003cd06bddd374b364a0ec" kindref="member">m_sequential</ref>.end())</highlight></codeline>
-<codeline lineno="1492"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1493"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" kindref="member">m_iter</ref><sp/>=<sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a0abfc80c0ca5c6d714df8a03e757516e" kindref="member">m_pr</ref>-&gt;<ref refid="classcxxopts_1_1_parse_result_1af2d75fd14457385e5127114007f64e20" kindref="member">m_defaults</ref>.begin();</highlight></codeline>
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-<codeline lineno="1495"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1496"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1497"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1498"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1499" refid="classcxxopts_1_1_parse_result_1_1_iterator_1af3ea912889d82299501e6d7c9d9d0332" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1af3ea912889d82299501e6d7c9d9d0332" kindref="member">operator++</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1500"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1501"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref><sp/>retval<sp/>=<sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1502"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++(*this);</highlight></codeline>
-<codeline lineno="1503"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>retval;</highlight></codeline>
-<codeline lineno="1504"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1505"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1506" refid="classcxxopts_1_1_parse_result_1_1_iterator_1a4f87f2937a3eb08f6e4b03e415966201" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a4f87f2937a3eb08f6e4b03e415966201" kindref="member">operator==</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1507"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1508"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" kindref="member">m_iter</ref><sp/>==<sp/>other.<ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" kindref="member">m_iter</ref>;</highlight></codeline>
-<codeline lineno="1509"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1510"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1511" refid="classcxxopts_1_1_parse_result_1_1_iterator_1a3ecd2b61c580c4f6b74a0b194c93b4c1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a3ecd2b61c580c4f6b74a0b194c93b4c1" kindref="member">operator!=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref>&amp;<sp/>other)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1512"><highlight class="keyword"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1513"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>!(*</highlight><highlight class="keyword">this</highlight><highlight class="normal"><sp/>==<sp/>other);</highlight></codeline>
-<codeline lineno="1514"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1515"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1516" refid="classcxxopts_1_1_parse_result_1_1_iterator_1aa2551df78e11cec0ce283b67e17d5757" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_key_value" kindref="compound">KeyValue</ref>&amp;<sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1aa2551df78e11cec0ce283b67e17d5757" kindref="member">operator*</ref>()</highlight></codeline>
-<codeline lineno="1517"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1518"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*<ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" kindref="member">m_iter</ref>;</highlight></codeline>
-<codeline lineno="1519"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1520"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1521" refid="classcxxopts_1_1_parse_result_1_1_iterator_1abfd067d3f69b365c0394d1b6b34c6229" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_key_value" kindref="compound">KeyValue</ref>*<sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1abfd067d3f69b365c0394d1b6b34c6229" kindref="member">operator-&gt;</ref>()</highlight></codeline>
-<codeline lineno="1522"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1523"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" kindref="member">m_iter</ref>.operator-&gt;();</highlight></codeline>
-<codeline lineno="1524"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1525"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1526"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1527" refid="classcxxopts_1_1_parse_result_1_1_iterator_1a0abfc80c0ca5c6d714df8a03e757516e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref>*<sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1a0abfc80c0ca5c6d714df8a03e757516e" kindref="member">m_pr</ref>;</highlight></codeline>
-<codeline lineno="1528" refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;KeyValue&gt;::const_iterator<sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator_1ab4f1163aa5e31ef5a073170ce207f050" kindref="member">m_iter</ref>;</highlight></codeline>
-<codeline lineno="1529"><highlight class="normal"><sp/><sp/><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1530"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1531" refid="classcxxopts_1_1_parse_result_1aa5f4a299ffec3be89782fc738ebd1065" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1aa5f4a299ffec3be89782fc738ebd1065" kindref="member">ParseResult</ref>()<sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1532" refid="classcxxopts_1_1_parse_result_1a23ef5f632ad50d13f93d6b846708de18" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1a23ef5f632ad50d13f93d6b846708de18" kindref="member">ParseResult</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref>&amp;)<sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1533"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1534" refid="classcxxopts_1_1_parse_result_1a1f05143f599a9c92a0321dd802988ba7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1a1f05143f599a9c92a0321dd802988ba7" kindref="member">ParseResult</ref>(<ref refid="namespacecxxopts_1a6cb0a4c694ab5bb7096323b810b797f3" kindref="member">NameHashMap</ref>&amp;&amp;<sp/>keys,<sp/><ref refid="namespacecxxopts_1a53a2c0afe2f23b85f2e880e3844f6232" kindref="member">ParsedHashMap</ref>&amp;&amp;<sp/>values,<sp/>std::vector&lt;KeyValue&gt;<sp/>sequential,<sp/></highlight></codeline>
-<codeline lineno="1535"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;KeyValue&gt;<sp/>default_opts,<sp/>std::vector&lt;std::string&gt;&amp;&amp;<sp/>unmatched_args)</highlight></codeline>
-<codeline lineno="1536"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_parse_result_1a80a096c08b5cbea6fb8b3cf9e5866cdc" kindref="member">m_keys</ref>(std::move(keys))</highlight></codeline>
-<codeline lineno="1537"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_parse_result_1a3de3faf3da35a04f003b5b71e2f992d2" kindref="member">m_values</ref>(std::move(values))</highlight></codeline>
-<codeline lineno="1538"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_parse_result_1ab9d7bcfd12003cd06bddd374b364a0ec" kindref="member">m_sequential</ref>(std::move(sequential))</highlight></codeline>
-<codeline lineno="1539"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_parse_result_1af2d75fd14457385e5127114007f64e20" kindref="member">m_defaults</ref>(std::move(default_opts))</highlight></codeline>
-<codeline lineno="1540"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_parse_result_1ab2f9e18fec44eed9f35bceeecb3f8dc8" kindref="member">m_unmatched</ref>(std::move(unmatched_args))</highlight></codeline>
-<codeline lineno="1541"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1542"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1543"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1544" refid="classcxxopts_1_1_parse_result_1a2453c59c7645794d4dcdd5f953c626ea" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref>&amp;<sp/><ref refid="classcxxopts_1_1_parse_result_1a2453c59c7645794d4dcdd5f953c626ea" kindref="member">operator=</ref>(<ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref>&amp;&amp;)<sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1545" refid="classcxxopts_1_1_parse_result_1aeee4df793ee1619395f7c7030d97cfc1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref>&amp;<sp/><ref refid="classcxxopts_1_1_parse_result_1aeee4df793ee1619395f7c7030d97cfc1" kindref="member">operator=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref>&amp;)<sp/>=<sp/></highlight><highlight class="keywordflow">default</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1546"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1547"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref></highlight></codeline>
-<codeline lineno="1548" refid="classcxxopts_1_1_parse_result_1a04bc1c49adacb8ded2d4f615a1b8bc82" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1a04bc1c49adacb8ded2d4f615a1b8bc82" kindref="member">begin</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1549"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1550"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref>(</highlight><highlight class="keyword">this</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="1551"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1552"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1553"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref></highlight></codeline>
-<codeline lineno="1554" refid="classcxxopts_1_1_parse_result_1a63ac972d67d59d5d6f2b6810ee1ad3c3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1a63ac972d67d59d5d6f2b6810ee1ad3c3" kindref="member">end</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1555"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1556"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1_1_iterator" kindref="compound">Iterator</ref>(</highlight><highlight class="keyword">this</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="1557"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1558"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1559"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1560" refid="classcxxopts_1_1_parse_result_1a0c638814a6a3f3301fffb6c32ddf83ad" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1a0c638814a6a3f3301fffb6c32ddf83ad" kindref="member">count</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>o)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1561"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1562"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>iter<sp/>=<sp/><ref refid="classcxxopts_1_1_parse_result_1a80a096c08b5cbea6fb8b3cf9e5866cdc" kindref="member">m_keys</ref>.find(o);</highlight></codeline>
-<codeline lineno="1563"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iter<sp/>==<sp/><ref refid="classcxxopts_1_1_parse_result_1a80a096c08b5cbea6fb8b3cf9e5866cdc" kindref="member">m_keys</ref>.end())</highlight></codeline>
-<codeline lineno="1564"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1565"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="1566"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1567"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1568"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>viter<sp/>=<sp/><ref refid="classcxxopts_1_1_parse_result_1a3de3faf3da35a04f003b5b71e2f992d2" kindref="member">m_values</ref>.find(iter-&gt;second);</highlight></codeline>
-<codeline lineno="1569"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1570"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(viter<sp/>==<sp/><ref refid="classcxxopts_1_1_parse_result_1a3de3faf3da35a04f003b5b71e2f992d2" kindref="member">m_values</ref>.end())</highlight></codeline>
-<codeline lineno="1571"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1572"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="1573"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1574"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1575"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>viter-&gt;second.count();</highlight></codeline>
-<codeline lineno="1576"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1577"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1578"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_value" kindref="compound">OptionValue</ref>&amp;</highlight></codeline>
-<codeline lineno="1579" refid="classcxxopts_1_1_parse_result_1a99aafd900cfe43417ca23cb4a340f8f4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1a99aafd900cfe43417ca23cb4a340f8f4" kindref="member">operator[]</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1580"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1581"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>iter<sp/>=<sp/><ref refid="classcxxopts_1_1_parse_result_1a80a096c08b5cbea6fb8b3cf9e5866cdc" kindref="member">m_keys</ref>.find(option);</highlight></codeline>
-<codeline lineno="1582"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1583"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iter<sp/>==<sp/><ref refid="classcxxopts_1_1_parse_result_1a80a096c08b5cbea6fb8b3cf9e5866cdc" kindref="member">m_keys</ref>.end())</highlight></codeline>
-<codeline lineno="1584"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1585"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_not_present_exception&gt;(option);</highlight></codeline>
-<codeline lineno="1586"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1587"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1588"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>viter<sp/>=<sp/><ref refid="classcxxopts_1_1_parse_result_1a3de3faf3da35a04f003b5b71e2f992d2" kindref="member">m_values</ref>.find(iter-&gt;second);</highlight></codeline>
-<codeline lineno="1589"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1590"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(viter<sp/>==<sp/><ref refid="classcxxopts_1_1_parse_result_1a3de3faf3da35a04f003b5b71e2f992d2" kindref="member">m_values</ref>.end())</highlight></codeline>
-<codeline lineno="1591"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1592"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_not_present_exception&gt;(option);</highlight></codeline>
-<codeline lineno="1593"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1594"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1595"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>viter-&gt;second;</highlight></codeline>
-<codeline lineno="1596"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1597"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1598"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;KeyValue&gt;&amp;</highlight></codeline>
-<codeline lineno="1599" refid="classcxxopts_1_1_parse_result_1aa36da283a42b3e75134af044f4ce6334" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1aa36da283a42b3e75134af044f4ce6334" kindref="member">arguments</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1600"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1601"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1ab9d7bcfd12003cd06bddd374b364a0ec" kindref="member">m_sequential</ref>;</highlight></codeline>
-<codeline lineno="1602"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1603"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1604"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;</highlight></codeline>
-<codeline lineno="1605" refid="classcxxopts_1_1_parse_result_1ab514eb0c342b577c2cb3fbce989016e3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1ab514eb0c342b577c2cb3fbce989016e3" kindref="member">unmatched</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1606"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1607"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1ab2f9e18fec44eed9f35bceeecb3f8dc8" kindref="member">m_unmatched</ref>;</highlight></codeline>
-<codeline lineno="1608"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1609"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1610"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;KeyValue&gt;&amp;</highlight></codeline>
-<codeline lineno="1611" refid="classcxxopts_1_1_parse_result_1acfee63a8f9c7b1ba9fc3c8ed4e37ae03" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1acfee63a8f9c7b1ba9fc3c8ed4e37ae03" kindref="member">defaults</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1612"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1613"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result_1af2d75fd14457385e5127114007f64e20" kindref="member">m_defaults</ref>;</highlight></codeline>
-<codeline lineno="1614"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1615"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1616"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string</highlight></codeline>
-<codeline lineno="1617" refid="classcxxopts_1_1_parse_result_1ae6c51699ddbd78cf786006ce53aca228" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result_1ae6c51699ddbd78cf786006ce53aca228" kindref="member">arguments_string</ref>()</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="1618"><highlight class="keyword"><sp/><sp/><sp/><sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="1619"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>result;</highlight></codeline>
-<codeline lineno="1620"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal">(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>kv:<sp/><ref refid="classcxxopts_1_1_parse_result_1ab9d7bcfd12003cd06bddd374b364a0ec" kindref="member">m_sequential</ref>)</highlight></codeline>
-<codeline lineno="1621"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1622"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/>kv.key()<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>=<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>kv.value()<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;\n&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1623"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1624"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal">(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>kv:<sp/><ref refid="classcxxopts_1_1_parse_result_1af2d75fd14457385e5127114007f64e20" kindref="member">m_defaults</ref>)</highlight></codeline>
-<codeline lineno="1625"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1626"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/>kv.key()<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>=<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>kv.value()<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/></highlight><highlight class="stringliteral">&quot;(default)&quot;</highlight><highlight class="normal"><sp/>+<sp/></highlight><highlight class="stringliteral">&quot;\n&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1627"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1628"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>result;</highlight></codeline>
-<codeline lineno="1629"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1630"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1631"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1632" refid="classcxxopts_1_1_parse_result_1a80a096c08b5cbea6fb8b3cf9e5866cdc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6cb0a4c694ab5bb7096323b810b797f3" kindref="member">NameHashMap</ref><sp/><ref refid="classcxxopts_1_1_parse_result_1a80a096c08b5cbea6fb8b3cf9e5866cdc" kindref="member">m_keys</ref>{};</highlight></codeline>
-<codeline lineno="1633" refid="classcxxopts_1_1_parse_result_1a3de3faf3da35a04f003b5b71e2f992d2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a53a2c0afe2f23b85f2e880e3844f6232" kindref="member">ParsedHashMap</ref><sp/><ref refid="classcxxopts_1_1_parse_result_1a3de3faf3da35a04f003b5b71e2f992d2" kindref="member">m_values</ref>{};</highlight></codeline>
-<codeline lineno="1634" refid="classcxxopts_1_1_parse_result_1ab9d7bcfd12003cd06bddd374b364a0ec" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;KeyValue&gt;<sp/><ref refid="classcxxopts_1_1_parse_result_1ab9d7bcfd12003cd06bddd374b364a0ec" kindref="member">m_sequential</ref>{};</highlight></codeline>
-<codeline lineno="1635" refid="classcxxopts_1_1_parse_result_1af2d75fd14457385e5127114007f64e20" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;KeyValue&gt;<sp/><ref refid="classcxxopts_1_1_parse_result_1af2d75fd14457385e5127114007f64e20" kindref="member">m_defaults</ref>{};</highlight></codeline>
-<codeline lineno="1636" refid="classcxxopts_1_1_parse_result_1ab2f9e18fec44eed9f35bceeecb3f8dc8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="classcxxopts_1_1_parse_result_1ab2f9e18fec44eed9f35bceeecb3f8dc8" kindref="member">m_unmatched</ref>{};</highlight></codeline>
-<codeline lineno="1637"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1638"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1639" refid="structcxxopts_1_1_option" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structcxxopts_1_1_option" kindref="compound">Option</ref></highlight></codeline>
-<codeline lineno="1640"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1641" refid="structcxxopts_1_1_option_1a9e4d1f0faf8bbcd414f20b08cfac8e70" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1_option_1a9e4d1f0faf8bbcd414f20b08cfac8e70" kindref="member">Option</ref></highlight></codeline>
-<codeline lineno="1642"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1643"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>opts,</highlight></codeline>
-<codeline lineno="1644"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>desc,</highlight></codeline>
-<codeline lineno="1645"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;const<sp/>Value&gt;<sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref><sp/>=<sp/>::cxxopts::value&lt;bool&gt;(),</highlight></codeline>
-<codeline lineno="1646"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>arg_help<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1647"><highlight class="normal"><sp/><sp/><sp/><sp/>)</highlight></codeline>
-<codeline lineno="1648"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="structcxxopts_1_1_option_1af5408ed9c7f5d322a8f4925aa337fa3e" kindref="member">opts_</ref>(std::move(opts))</highlight></codeline>
-<codeline lineno="1649"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="structcxxopts_1_1_option_1af7e90af1a125c138802e576225ecb675" kindref="member">desc_</ref>(std::move(desc))</highlight></codeline>
-<codeline lineno="1650"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="structcxxopts_1_1_option_1a15377ffd237b0a9c5eb81fd632d7c1fb" kindref="member">value_</ref>(std::move(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>))</highlight></codeline>
-<codeline lineno="1651"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="structcxxopts_1_1_option_1adde04f86cc5d1e5ee2acdf401d1c0e54" kindref="member">arg_help_</ref>(std::move(arg_help))</highlight></codeline>
-<codeline lineno="1652"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1653"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1654"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1655" refid="structcxxopts_1_1_option_1af5408ed9c7f5d322a8f4925aa337fa3e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_option_1af5408ed9c7f5d322a8f4925aa337fa3e" kindref="member">opts_</ref>;</highlight></codeline>
-<codeline lineno="1656" refid="structcxxopts_1_1_option_1af7e90af1a125c138802e576225ecb675" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_option_1af7e90af1a125c138802e576225ecb675" kindref="member">desc_</ref>;</highlight></codeline>
-<codeline lineno="1657" refid="structcxxopts_1_1_option_1a15377ffd237b0a9c5eb81fd632d7c1fb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;const<sp/>Value&gt;<sp/><ref refid="structcxxopts_1_1_option_1a15377ffd237b0a9c5eb81fd632d7c1fb" kindref="member">value_</ref>;</highlight></codeline>
-<codeline lineno="1658" refid="structcxxopts_1_1_option_1adde04f86cc5d1e5ee2acdf401d1c0e54" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="structcxxopts_1_1_option_1adde04f86cc5d1e5ee2acdf401d1c0e54" kindref="member">arg_help_</ref>;</highlight></codeline>
-<codeline lineno="1659"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1660"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1661" refid="namespacecxxopts_1acbe4e799af04e9f666aabb38aed191e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts_1acbe4e799af04e9f666aabb38aed191e9" kindref="member">OptionMap</ref><sp/>=<sp/>std::unordered_map&lt;std::string,<sp/>std::shared_ptr&lt;OptionDetails&gt;&gt;;</highlight></codeline>
-<codeline lineno="1662" refid="namespacecxxopts_1a9e9e1130cb7950a3af5c8e474f36107d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts_1a9e9e1130cb7950a3af5c8e474f36107d" kindref="member">PositionalList</ref><sp/>=<sp/>std::vector&lt;std::string&gt;;</highlight></codeline>
-<codeline lineno="1663" refid="namespacecxxopts_1a89e13b1a05701bb8a4b6401fdbb1eb71" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="namespacecxxopts_1a89e13b1a05701bb8a4b6401fdbb1eb71" kindref="member">PositionalListIterator</ref><sp/>=<sp/>PositionalList::const_iterator;</highlight></codeline>
-<codeline lineno="1664"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1665" refid="classcxxopts_1_1_option_parser" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser" kindref="compound">OptionParser</ref></highlight></codeline>
-<codeline lineno="1666"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1667"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1668" refid="classcxxopts_1_1_option_parser_1a0b61e22df2480c2c91f2793f3c1452ff" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a0b61e22df2480c2c91f2793f3c1452ff" kindref="member">OptionParser</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1acbe4e799af04e9f666aabb38aed191e9" kindref="member">OptionMap</ref>&amp;<sp/>options,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a9e9e1130cb7950a3af5c8e474f36107d" kindref="member">PositionalList</ref>&amp;<sp/>positional,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>allow_unrecognised)</highlight></codeline>
-<codeline lineno="1669"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>(options)</highlight></codeline>
-<codeline lineno="1670"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_option_parser_1a424687c64b3524f638b2d26376ea39c3" kindref="member">m_positional</ref>(positional)</highlight></codeline>
-<codeline lineno="1671"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_option_parser_1a9603840d51c4695b3ad5258702c619d9" kindref="member">m_allow_unrecognised</ref>(allow_unrecognised)</highlight></codeline>
-<codeline lineno="1672"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1673"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1674"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1675"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref></highlight></codeline>
-<codeline lineno="1676"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="global_8_h_1a735b1ce7a340373ac87191026132d105" kindref="member">parse</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>argc,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">*<sp/>argv);</highlight></codeline>
-<codeline lineno="1677"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1678"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1679"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a4d595d8f6f34760bc2248d1b96af53a4" kindref="member">consume_positional</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>a,<sp/><ref refid="namespacecxxopts_1a89e13b1a05701bb8a4b6401fdbb1eb71" kindref="member">PositionalListIterator</ref>&amp;<sp/>next);</highlight></codeline>
-<codeline lineno="1680"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1681"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1682"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a0c093ba32746de7c3b08715eab961aff" kindref="member">checked_parse_arg</ref></highlight></codeline>
-<codeline lineno="1683"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1684"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>argc,</highlight></codeline>
-<codeline lineno="1685"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">*<sp/>argv,</highlight></codeline>
-<codeline lineno="1686"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>current,</highlight></codeline>
-<codeline lineno="1687"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,</highlight></codeline>
-<codeline lineno="1688"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name</highlight></codeline>
-<codeline lineno="1689"><highlight class="normal"><sp/><sp/><sp/><sp/>);</highlight></codeline>
-<codeline lineno="1690"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1691"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1692"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a20b45a90265756b859aec3ebcbee8724" kindref="member">add_to_option</ref>(OptionMap::const_iterator<sp/>iter,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>arg);</highlight></codeline>
-<codeline lineno="1693"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1694"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1695"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">parse_option</ref></highlight></codeline>
-<codeline lineno="1696"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1697"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,</highlight></codeline>
-<codeline lineno="1698"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name,</highlight></codeline>
-<codeline lineno="1699"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>arg<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1700"><highlight class="normal"><sp/><sp/><sp/><sp/>);</highlight></codeline>
-<codeline lineno="1701"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1702"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1703"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a28026f132e532009842f11359fb08373" kindref="member">parse_default</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/>details);</highlight></codeline>
-<codeline lineno="1704"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1705"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1706"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a80bbe1ff81b5d39bf6fda208e95a0d04" kindref="member">parse_no_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/>details);</highlight></codeline>
-<codeline lineno="1707"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1708"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1709"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1710"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parser_1a375fff61bb08268e6deb81baa0514b27" kindref="member">finalise_aliases</ref>();</highlight></codeline>
-<codeline lineno="1711"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1712" refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1acbe4e799af04e9f666aabb38aed191e9" kindref="member">OptionMap</ref>&amp;<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>;</highlight></codeline>
-<codeline lineno="1713" refid="classcxxopts_1_1_option_parser_1a424687c64b3524f638b2d26376ea39c3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a9e9e1130cb7950a3af5c8e474f36107d" kindref="member">PositionalList</ref>&amp;<sp/><ref refid="classcxxopts_1_1_option_parser_1a424687c64b3524f638b2d26376ea39c3" kindref="member">m_positional</ref>;</highlight></codeline>
-<codeline lineno="1714"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1715" refid="classcxxopts_1_1_option_parser_1a5b4c043201d07e3a37a138313ea53fef" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;KeyValue&gt;<sp/><ref refid="classcxxopts_1_1_option_parser_1a5b4c043201d07e3a37a138313ea53fef" kindref="member">m_sequential</ref>{};</highlight></codeline>
-<codeline lineno="1716" refid="classcxxopts_1_1_option_parser_1aeebe66824e25c8d466ecfd21c4234380" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;KeyValue&gt;<sp/><ref refid="classcxxopts_1_1_option_parser_1aeebe66824e25c8d466ecfd21c4234380" kindref="member">m_defaults</ref>{};</highlight></codeline>
-<codeline lineno="1717" refid="classcxxopts_1_1_option_parser_1a9603840d51c4695b3ad5258702c619d9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_parser_1a9603840d51c4695b3ad5258702c619d9" kindref="member">m_allow_unrecognised</ref>;</highlight></codeline>
-<codeline lineno="1718"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1719" refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a53a2c0afe2f23b85f2e880e3844f6232" kindref="member">ParsedHashMap</ref><sp/><ref refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" kindref="member">m_parsed</ref>{};</highlight></codeline>
-<codeline lineno="1720" refid="classcxxopts_1_1_option_parser_1a55888886d57470ca84f908948b39fe6b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6cb0a4c694ab5bb7096323b810b797f3" kindref="member">NameHashMap</ref><sp/><ref refid="classcxxopts_1_1_option_parser_1a55888886d57470ca84f908948b39fe6b" kindref="member">m_keys</ref>{};</highlight></codeline>
-<codeline lineno="1721"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1722"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1723" refid="classcxxopts_1_1_options" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_options" kindref="compound">Options</ref></highlight></codeline>
-<codeline lineno="1724"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1725"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1726"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1727" refid="classcxxopts_1_1_options_1ab73d569871f0a8ae1ba9be77397fab5e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">explicit</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_options_1ab73d569871f0a8ae1ba9be77397fab5e" kindref="member">Options</ref>(std::string<sp/>program,<sp/>std::string<sp/>help_string<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1728"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_options_1a49f97b72bcc81357c9df0cbc657bb3a7" kindref="member">m_program</ref>(std::move(program))</highlight></codeline>
-<codeline lineno="1729"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_options_1a415a57d6ed9bac80126e1b9d5e8b800f" kindref="member">m_help_string</ref>(<ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(std::move(help_string)))</highlight></codeline>
-<codeline lineno="1730"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_options_1a32488bc1b1581d80b90a8a476fbeb1c4" kindref="member">m_custom_help</ref>(</highlight><highlight class="stringliteral">&quot;[OPTION...]&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1731"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_options_1ac5274870d676ae960f285a2e8f0dfdf6" kindref="member">m_positional_help</ref>(</highlight><highlight class="stringliteral">&quot;positional<sp/>parameters&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1732"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_options_1ae0a47e72e50fc46543bc1bce186fe66a" kindref="member">m_show_positional</ref>(false)</highlight></codeline>
-<codeline lineno="1733"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_options_1a862b3814638d3a11f582c417e09f02fc" kindref="member">m_allow_unrecognised</ref>(false)</highlight></codeline>
-<codeline lineno="1734"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_options_1a195a58cf2247ca00746c647f942a5fda" kindref="member">m_width</ref>(76)</highlight></codeline>
-<codeline lineno="1735"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_options_1ad8a944b69e10ac5ac5c163a1415088f1" kindref="member">m_tab_expansion</ref>(false)</highlight></codeline>
-<codeline lineno="1736"><highlight class="normal"><sp/><sp/><sp/><sp/>,<sp/><ref refid="classcxxopts_1_1_options_1a6eda69429efb7bff7e3837c67c2953be" kindref="member">m_options</ref>(std::make_shared&lt;<ref refid="namespacecxxopts_1acbe4e799af04e9f666aabb38aed191e9" kindref="member">OptionMap</ref>&gt;())</highlight></codeline>
-<codeline lineno="1737"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1738"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1739"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1740"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options" kindref="compound">Options</ref>&amp;</highlight></codeline>
-<codeline lineno="1741" refid="classcxxopts_1_1_options_1af7d13089d919a6fee89b90372c11252f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1af7d13089d919a6fee89b90372c11252f" kindref="member">positional_help</ref>(std::string<sp/>help_text)</highlight></codeline>
-<codeline lineno="1742"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1743"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1ac5274870d676ae960f285a2e8f0dfdf6" kindref="member">m_positional_help</ref><sp/>=<sp/>std::move(help_text);</highlight></codeline>
-<codeline lineno="1744"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1745"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1746"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1747"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options" kindref="compound">Options</ref>&amp;</highlight></codeline>
-<codeline lineno="1748" refid="classcxxopts_1_1_options_1ad9b7503fbb631a4c30d949d4a7c317f6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1ad9b7503fbb631a4c30d949d4a7c317f6" kindref="member">custom_help</ref>(std::string<sp/>help_text)</highlight></codeline>
-<codeline lineno="1749"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1750"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a32488bc1b1581d80b90a8a476fbeb1c4" kindref="member">m_custom_help</ref><sp/>=<sp/>std::move(help_text);</highlight></codeline>
-<codeline lineno="1751"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1752"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1753"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1754"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options" kindref="compound">Options</ref>&amp;</highlight></codeline>
-<codeline lineno="1755" refid="classcxxopts_1_1_options_1a60dc8a681dcfe6bbe051a272187eaa01" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a60dc8a681dcfe6bbe051a272187eaa01" kindref="member">show_positional_help</ref>()</highlight></codeline>
-<codeline lineno="1756"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1757"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1ae0a47e72e50fc46543bc1bce186fe66a" kindref="member">m_show_positional</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1758"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1759"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1760"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1761"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options" kindref="compound">Options</ref>&amp;</highlight></codeline>
-<codeline lineno="1762" refid="classcxxopts_1_1_options_1a9adcc723d37ae463b10a248200515d15" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a9adcc723d37ae463b10a248200515d15" kindref="member">allow_unrecognised_options</ref>()</highlight></codeline>
-<codeline lineno="1763"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1764"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a862b3814638d3a11f582c417e09f02fc" kindref="member">m_allow_unrecognised</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1765"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1766"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1767"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1768"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options" kindref="compound">Options</ref>&amp;</highlight></codeline>
-<codeline lineno="1769" refid="classcxxopts_1_1_options_1a491f557e100e7cc56623527066225abf" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a491f557e100e7cc56623527066225abf" kindref="member">set_width</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>width)</highlight></codeline>
-<codeline lineno="1770"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1771"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a195a58cf2247ca00746c647f942a5fda" kindref="member">m_width</ref><sp/>=<sp/>width;</highlight></codeline>
-<codeline lineno="1772"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1773"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1774"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1775"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options" kindref="compound">Options</ref>&amp;</highlight></codeline>
-<codeline lineno="1776" refid="classcxxopts_1_1_options_1a938a9a0d9d9bdcaa0ed4e4196a6504b4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a938a9a0d9d9bdcaa0ed4e4196a6504b4" kindref="member">set_tab_expansion</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>expansion=</highlight><highlight class="keyword">true</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1777"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1778"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1ad8a944b69e10ac5ac5c163a1415088f1" kindref="member">m_tab_expansion</ref><sp/>=<sp/>expansion;</highlight></codeline>
-<codeline lineno="1779"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1780"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1781"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1782"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref></highlight></codeline>
-<codeline lineno="1783"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="global_8_h_1a735b1ce7a340373ac87191026132d105" kindref="member">parse</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>argc,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">*<sp/>argv);</highlight></codeline>
-<codeline lineno="1784"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1785"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_adder" kindref="compound">OptionAdder</ref></highlight></codeline>
-<codeline lineno="1786"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a8c4fcf551295cde940a1a60012b3e9b6" kindref="member">add_options</ref>(std::string<sp/>group<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="1787"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1788"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1789"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a8c4fcf551295cde940a1a60012b3e9b6" kindref="member">add_options</ref></highlight></codeline>
-<codeline lineno="1790"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1791"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>group,</highlight></codeline>
-<codeline lineno="1792"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::initializer_list&lt;Option&gt;<sp/>options</highlight></codeline>
-<codeline lineno="1793"><highlight class="normal"><sp/><sp/><sp/><sp/>);</highlight></codeline>
-<codeline lineno="1794"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1795"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1796"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1ac698adfe5b5ca50d36017a52b27fb828" kindref="member">add_option</ref></highlight></codeline>
-<codeline lineno="1797"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1798"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>group,</highlight></codeline>
-<codeline lineno="1799"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1_option" kindref="compound">Option</ref>&amp;<sp/>option</highlight></codeline>
-<codeline lineno="1800"><highlight class="normal"><sp/><sp/><sp/><sp/>);</highlight></codeline>
-<codeline lineno="1801"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1802"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1803"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1ac698adfe5b5ca50d36017a52b27fb828" kindref="member">add_option</ref></highlight></codeline>
-<codeline lineno="1804"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1805"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>group,</highlight></codeline>
-<codeline lineno="1806"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>s,</highlight></codeline>
-<codeline lineno="1807"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>l,</highlight></codeline>
-<codeline lineno="1808"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>desc,</highlight></codeline>
-<codeline lineno="1809"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;const<sp/>Value&gt;&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,</highlight></codeline>
-<codeline lineno="1810"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>arg_help</highlight></codeline>
-<codeline lineno="1811"><highlight class="normal"><sp/><sp/><sp/><sp/>);</highlight></codeline>
-<codeline lineno="1812"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1813"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//parse<sp/>positional<sp/>arguments<sp/>into<sp/>the<sp/>given<sp/>option</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1814"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1815"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">parse_positional</ref>(std::string<sp/>option);</highlight></codeline>
-<codeline lineno="1816"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1817"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1818"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">parse_positional</ref>(std::vector&lt;std::string&gt;<sp/>options);</highlight></codeline>
-<codeline lineno="1819"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1820"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1821"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">parse_positional</ref>(std::initializer_list&lt;std::string&gt;<sp/>options);</highlight></codeline>
-<codeline lineno="1822"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1823"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">typename</highlight><highlight class="normal"><sp/>Iterator&gt;</highlight></codeline>
-<codeline lineno="1824"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1825" refid="classcxxopts_1_1_options_1a2e7b51be5b760aab92134268812f2042" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a2e7b51be5b760aab92134268812f2042" kindref="member">parse_positional</ref>(<ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/>begin,<sp/><ref refid="struct_iterator" kindref="compound">Iterator</ref><sp/>end)<sp/>{</highlight></codeline>
-<codeline lineno="1826"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">parse_positional</ref>(std::vector&lt;std::string&gt;{begin,<sp/>end});</highlight></codeline>
-<codeline lineno="1827"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1828"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1829"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string</highlight></codeline>
-<codeline lineno="1830"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a7392b09071f42ed45dea85738af965b4" kindref="member">help</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="classcxxopts_1_1_options_1a86dce378e2f277514653394952715021" kindref="member">groups</ref><sp/>=<sp/>{})<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1831"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1832"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;</highlight></codeline>
-<codeline lineno="1833"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a86dce378e2f277514653394952715021" kindref="member">groups</ref>()<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1834"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1835"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>HelpGroupDetails&amp;</highlight></codeline>
-<codeline lineno="1836"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1ab5ebc9a3f07419d8b5a58d55c9929f09" kindref="member">group_help</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>group)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1837"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1838"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1839"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1840"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1841"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a6a7ca6845bfe17a801b0c3f229655f42" kindref="member">add_one_option</ref></highlight></codeline>
-<codeline lineno="1842"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1843"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option,</highlight></codeline>
-<codeline lineno="1844"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/>details</highlight></codeline>
-<codeline lineno="1845"><highlight class="normal"><sp/><sp/><sp/><sp/>);</highlight></codeline>
-<codeline lineno="1846"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1847"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref></highlight></codeline>
-<codeline lineno="1848"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a7a9611069d511f815c71a1f4aca302eb" kindref="member">help_one_group</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>group)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1849"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1850"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1851"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1ab09329dad31b464891556a4cd2659d04" kindref="member">generate_group_help</ref></highlight></codeline>
-<codeline lineno="1852"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1853"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>result,</highlight></codeline>
-<codeline lineno="1854"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/><ref refid="classcxxopts_1_1_options_1a86dce378e2f277514653394952715021" kindref="member">groups</ref></highlight></codeline>
-<codeline lineno="1855"><highlight class="normal"><sp/><sp/><sp/><sp/>)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1856"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1857"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1858"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1adc15c2e713a3c026c7a25e83612ec247" kindref="member">generate_all_groups_help</ref>(<ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>result)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1859"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1860" refid="classcxxopts_1_1_options_1a49f97b72bcc81357c9df0cbc657bb3a7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_options_1a49f97b72bcc81357c9df0cbc657bb3a7" kindref="member">m_program</ref>{};</highlight></codeline>
-<codeline lineno="1861" refid="classcxxopts_1_1_options_1a415a57d6ed9bac80126e1b9d5e8b800f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/><ref refid="classcxxopts_1_1_options_1a415a57d6ed9bac80126e1b9d5e8b800f" kindref="member">m_help_string</ref>{};</highlight></codeline>
-<codeline lineno="1862" refid="classcxxopts_1_1_options_1a32488bc1b1581d80b90a8a476fbeb1c4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_options_1a32488bc1b1581d80b90a8a476fbeb1c4" kindref="member">m_custom_help</ref>{};</highlight></codeline>
-<codeline lineno="1863" refid="classcxxopts_1_1_options_1ac5274870d676ae960f285a2e8f0dfdf6" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_options_1ac5274870d676ae960f285a2e8f0dfdf6" kindref="member">m_positional_help</ref>{};</highlight></codeline>
-<codeline lineno="1864" refid="classcxxopts_1_1_options_1ae0a47e72e50fc46543bc1bce186fe66a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_options_1ae0a47e72e50fc46543bc1bce186fe66a" kindref="member">m_show_positional</ref>;</highlight></codeline>
-<codeline lineno="1865" refid="classcxxopts_1_1_options_1a862b3814638d3a11f582c417e09f02fc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_options_1a862b3814638d3a11f582c417e09f02fc" kindref="member">m_allow_unrecognised</ref>;</highlight></codeline>
-<codeline lineno="1866" refid="classcxxopts_1_1_options_1a195a58cf2247ca00746c647f942a5fda" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_options_1a195a58cf2247ca00746c647f942a5fda" kindref="member">m_width</ref>;</highlight></codeline>
-<codeline lineno="1867" refid="classcxxopts_1_1_options_1ad8a944b69e10ac5ac5c163a1415088f1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_options_1ad8a944b69e10ac5ac5c163a1415088f1" kindref="member">m_tab_expansion</ref>;</highlight></codeline>
-<codeline lineno="1868"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1869" refid="classcxxopts_1_1_options_1a6eda69429efb7bff7e3837c67c2953be" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::shared_ptr&lt;OptionMap&gt;<sp/><ref refid="classcxxopts_1_1_options_1a6eda69429efb7bff7e3837c67c2953be" kindref="member">m_options</ref>;</highlight></codeline>
-<codeline lineno="1870" refid="classcxxopts_1_1_options_1a2f7e42d87e511d25966cf48b504fa1f9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;std::string&gt;<sp/><ref refid="classcxxopts_1_1_options_1a2f7e42d87e511d25966cf48b504fa1f9" kindref="member">m_positional</ref>{};</highlight></codeline>
-<codeline lineno="1871" refid="classcxxopts_1_1_options_1ad9aeb1f3ce3755f6294442c419a414c1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::unordered_set&lt;std::string&gt;<sp/><ref refid="classcxxopts_1_1_options_1ad9aeb1f3ce3755f6294442c419a414c1" kindref="member">m_positional_set</ref>{};</highlight></codeline>
-<codeline lineno="1872"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1873"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//mapping<sp/>from<sp/>groups<sp/>to<sp/>help<sp/>options</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1874" refid="classcxxopts_1_1_options_1a5df536e6ca2018564263e350c2ed8679" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::map&lt;std::string,<sp/>HelpGroupDetails&gt;<sp/><ref refid="classcxxopts_1_1_options_1a5df536e6ca2018564263e350c2ed8679" kindref="member">m_help</ref>{};</highlight></codeline>
-<codeline lineno="1875"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1876" refid="classcxxopts_1_1_options_1a7408c12072b6d9a6cb7581ec17b48a1e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::list&lt;OptionDetails&gt;<sp/><ref refid="classcxxopts_1_1_options_1a7408c12072b6d9a6cb7581ec17b48a1e" kindref="member">m_option_list</ref>{};</highlight></codeline>
-<codeline lineno="1877" refid="classcxxopts_1_1_options_1adc78b18ef63a36a06c3311e6c56b9ebb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::unordered_map&lt;std::string,<sp/></highlight><highlight class="keyword">decltype</highlight><highlight class="normal">(<ref refid="classcxxopts_1_1_options_1a7408c12072b6d9a6cb7581ec17b48a1e" kindref="member">m_option_list</ref>)::iterator&gt;<sp/><ref refid="classcxxopts_1_1_options_1adc78b18ef63a36a06c3311e6c56b9ebb" kindref="member">m_option_map</ref>{};</highlight></codeline>
-<codeline lineno="1878"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="1879"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1880" refid="classcxxopts_1_1_option_adder" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classcxxopts_1_1_option_adder" kindref="compound">OptionAdder</ref></highlight></codeline>
-<codeline lineno="1881"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1882"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="1883"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1884" refid="classcxxopts_1_1_option_adder_1ac9da55d72245e55eed70486200a60728" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_adder_1ac9da55d72245e55eed70486200a60728" kindref="member">OptionAdder</ref>(<ref refid="classcxxopts_1_1_options" kindref="compound">Options</ref>&amp;<sp/>options,<sp/>std::string<sp/>group)</highlight></codeline>
-<codeline lineno="1885"><highlight class="normal"><sp/><sp/><sp/><sp/>:<sp/><ref refid="classcxxopts_1_1_option_adder_1a84a1bb47fc5417299ceefbbdaf84c6cb" kindref="member">m_options</ref>(options),<sp/><ref refid="classcxxopts_1_1_option_adder_1ab159178d063eaa4836fe828036dc25a8" kindref="member">m_group</ref>(std::move(group))</highlight></codeline>
-<codeline lineno="1886"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1887"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="1891"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
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-<codeline lineno="1893"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>desc,</highlight></codeline>
-<codeline lineno="1894"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;const<sp/>Value&gt;&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref></highlight></codeline>
-<codeline lineno="1895"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>::cxxopts::value&lt;bool&gt;(),</highlight></codeline>
-<codeline lineno="1896"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>arg_help<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="1898"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1899"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
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-<codeline lineno="1901" refid="classcxxopts_1_1_option_adder_1ab159178d063eaa4836fe828036dc25a8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::string<sp/><ref refid="classcxxopts_1_1_option_adder_1ab159178d063eaa4836fe828036dc25a8" kindref="member">m_group</ref>;</highlight></codeline>
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-<codeline lineno="1903"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1904"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">namespace</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1905"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1906"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">constexpr</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>OPTION_LONGEST<sp/>=<sp/>30;</highlight></codeline>
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-<codeline lineno="1908"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1909"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref></highlight></codeline>
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-<codeline lineno="1911"><highlight class="normal"><sp/><sp/><sp/><sp/>(</highlight></codeline>
-<codeline lineno="1912"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1_help_option_details" kindref="compound">HelpOptionDetails</ref>&amp;<sp/>o</highlight></codeline>
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-<codeline lineno="1914"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1915"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>s<sp/>=<sp/>o.<ref refid="structcxxopts_1_1_help_option_details_1a83cb4bc76deb1d40c89de4165e4b0cdc" kindref="member">s</ref>;</highlight></codeline>
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-<codeline lineno="1917"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1918"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>result<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;<sp/><sp/>&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1919"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1920"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!s.empty())</highlight></codeline>
-<codeline lineno="1921"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1922"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;-&quot;</highlight><highlight class="normal"><sp/>+<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(s);</highlight></codeline>
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-<codeline lineno="1925"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;,&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1926"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1927"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1928"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1929"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1930"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;<sp/><sp/><sp/>&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="1931"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1932"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1933"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!l.empty())</highlight></codeline>
-<codeline lineno="1934"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1935"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;<sp/>--&quot;</highlight><highlight class="normal"><sp/>+<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(l);</highlight></codeline>
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-<codeline lineno="1937"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1938"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>arg<sp/>=<sp/>!o.<ref refid="structcxxopts_1_1_help_option_details_1a61afda425e73f688a21eae557efa8f25" kindref="member">arg_help</ref>.empty()<sp/>?<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(o.<ref refid="structcxxopts_1_1_help_option_details_1a61afda425e73f688a21eae557efa8f25" kindref="member">arg_help</ref>)<sp/>:<sp/></highlight><highlight class="stringliteral">&quot;arg&quot;</highlight><highlight class="normal">;</highlight></codeline>
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-<codeline lineno="1940"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!o.<ref refid="structcxxopts_1_1_help_option_details_1ae9edda8b102865694f3b76ef162f0ead" kindref="member">is_boolean</ref>)</highlight></codeline>
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-<codeline lineno="1942"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(o.<ref refid="structcxxopts_1_1_help_option_details_1ad9ddbdca27930394f32b51f7bf3b1748" kindref="member">has_implicit</ref>)</highlight></codeline>
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-<codeline lineno="1946"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="1948"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>arg;</highlight></codeline>
-<codeline lineno="1949"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1950"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1951"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1952"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>result;</highlight></codeline>
-<codeline lineno="1953"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1954"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1955"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref></highlight></codeline>
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-<codeline lineno="1958"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>HelpOptionDetails&amp;<sp/>o,</highlight></codeline>
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-<codeline lineno="1963"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1964"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>desc<sp/>=<sp/>o.desc;</highlight></codeline>
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-<codeline lineno="1966"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(o.has_default<sp/>&amp;&amp;<sp/>(!o.is_boolean<sp/>||<sp/>o.default_value<sp/>!=<sp/></highlight><highlight class="stringliteral">&quot;false&quot;</highlight><highlight class="normal">))</highlight></codeline>
-<codeline lineno="1967"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1968"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">(!o.default_value.empty())</highlight></codeline>
-<codeline lineno="1969"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1970"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>+=<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(</highlight><highlight class="stringliteral">&quot;<sp/>(default:<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>o.default_value<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;)&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="1971"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1972"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1973"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1974"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>+=<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(</highlight><highlight class="stringliteral">&quot;<sp/>(default:<sp/>\&quot;\&quot;)&quot;</highlight><highlight class="normal">);</highlight></codeline>
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-<codeline lineno="1976"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1977"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1978"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>result;</highlight></codeline>
-<codeline lineno="1979"><highlight class="normal"></highlight></codeline>
-<codeline lineno="1980"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(tab_expansion)</highlight></codeline>
-<codeline lineno="1981"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1982"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>desc2;</highlight></codeline>
-<codeline lineno="1983"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>size<sp/>=<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal">{<sp/>0<sp/>};</highlight></codeline>
-<codeline lineno="1984"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>c<sp/>=<sp/>std::begin(desc);<sp/>c<sp/>!=<sp/>std::end(desc);<sp/>++c)</highlight></codeline>
-<codeline lineno="1985"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1986"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*c<sp/>==<sp/></highlight><highlight class="charliteral">&apos;\n&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1987"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1988"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc2<sp/>+=<sp/>*c;</highlight></codeline>
-<codeline lineno="1989"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="1990"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="1991"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*c<sp/>==<sp/></highlight><highlight class="charliteral">&apos;\t&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="1992"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1993"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>skip<sp/>=<sp/>8<sp/>-<sp/>size<sp/>%<sp/>8;</highlight></codeline>
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-<codeline lineno="1995"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>size<sp/>+=<sp/>skip;</highlight></codeline>
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-<codeline lineno="1997"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="1998"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="1999"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc2<sp/>+=<sp/>*c;</highlight></codeline>
-<codeline lineno="2000"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++size;</highlight></codeline>
-<codeline lineno="2001"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2002"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2003"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>=<sp/>desc2;</highlight></codeline>
-<codeline lineno="2004"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2005"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2006"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>desc<sp/>+=<sp/></highlight><highlight class="stringliteral">&quot;<sp/>&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2007"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2008"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>current<sp/>=<sp/>std::begin(desc);</highlight></codeline>
-<codeline lineno="2009"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>previous<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2010"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>startLine<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2011"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>lastSpace<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2012"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2013"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>size<sp/>=<sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal">{};</highlight></codeline>
-<codeline lineno="2014"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2015"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>appendNewLine;</highlight></codeline>
-<codeline lineno="2016"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>onlyWhiteSpace<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2017"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2018"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(current<sp/>!=<sp/>std::end(desc))</highlight></codeline>
-<codeline lineno="2019"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2020"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>appendNewLine<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2021"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2022"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(std::isblank(*previous))</highlight></codeline>
-<codeline lineno="2023"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2024"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>lastSpace<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2025"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2026"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2027"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!std::isblank(*current))</highlight></codeline>
-<codeline lineno="2028"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2029"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>onlyWhiteSpace<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2030"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2031"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2032"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(*current<sp/>==<sp/></highlight><highlight class="charliteral">&apos;\n&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2033"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2034"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>previous<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2035"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++current;</highlight></codeline>
-<codeline lineno="2036"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>appendNewLine<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2037"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2038"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2039"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!appendNewLine<sp/>&amp;&amp;<sp/>size<sp/>&gt;=<sp/>allowed)</highlight></codeline>
-<codeline lineno="2040"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2041"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(lastSpace<sp/>!=<sp/>startLine)</highlight></codeline>
-<codeline lineno="2042"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2043"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>current<sp/>=<sp/>lastSpace;</highlight></codeline>
-<codeline lineno="2044"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>previous<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2045"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2046"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>appendNewLine<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2047"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2048"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2049"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(appendNewLine)</highlight></codeline>
-<codeline lineno="2050"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2051"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(result,<sp/>startLine,<sp/>current);</highlight></codeline>
-<codeline lineno="2052"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>startLine<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2053"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>lastSpace<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2054"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2055"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*previous<sp/>!=<sp/></highlight><highlight class="charliteral">&apos;\n&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2056"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2057"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(result,<sp/></highlight><highlight class="stringliteral">&quot;\n&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="2058"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2059"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2060"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(result,<sp/>start,<sp/></highlight><highlight class="charliteral">&apos;<sp/>&apos;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="2061"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2062"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(*previous<sp/>!=<sp/></highlight><highlight class="charliteral">&apos;\n&apos;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2063"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2064"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(result,<sp/>lastSpace,<sp/>current);</highlight></codeline>
-<codeline lineno="2065"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2066"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2067"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>onlyWhiteSpace<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2068"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>size<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="2069"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2070"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2071"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>previous<sp/>=<sp/>current;</highlight></codeline>
-<codeline lineno="2072"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++current;</highlight></codeline>
-<codeline lineno="2073"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++size;</highlight></codeline>
-<codeline lineno="2074"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2075"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2076"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//append<sp/>whatever<sp/>is<sp/>left<sp/>but<sp/>ignore<sp/>whitespace</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2077"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!onlyWhiteSpace)</highlight></codeline>
-<codeline lineno="2078"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2079"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1aea4319f3c17c89dc3c067d68d0fb915d" kindref="member">stringAppend</ref>(result,<sp/>startLine,<sp/>previous);</highlight></codeline>
-<codeline lineno="2080"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2081"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2082"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>result;</highlight></codeline>
-<codeline lineno="2083"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2084"><highlight class="normal"><sp/><sp/>}<sp/></highlight><highlight class="comment">//<sp/>namespace</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2085"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2086"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2087"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2088" refid="classcxxopts_1_1_options_1a95878aa582f2ed8e0a2b73e735eb287d" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a8c4fcf551295cde940a1a60012b3e9b6" kindref="member">Options::add_options</ref></highlight></codeline>
-<codeline lineno="2089"><highlight class="normal">(</highlight></codeline>
-<codeline lineno="2090"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;group,</highlight></codeline>
-<codeline lineno="2091"><highlight class="normal"><sp/><sp/>std::initializer_list&lt;Option&gt;<sp/>options</highlight></codeline>
-<codeline lineno="2092"><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2093"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2094"><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_adder" kindref="compound">OptionAdder</ref><sp/>option_adder(*</highlight><highlight class="keyword">this</highlight><highlight class="normal">,<sp/>group);</highlight></codeline>
-<codeline lineno="2095"><highlight class="normal"><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>&amp;option:<sp/>options)</highlight></codeline>
-<codeline lineno="2096"><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="2097"><highlight class="normal"><sp/><sp/><sp/>option_adder(option.opts_,<sp/>option.desc_,<sp/>option.value_,<sp/>option.arg_help_);</highlight></codeline>
-<codeline lineno="2098"><highlight class="normal"><sp/>}</highlight></codeline>
-<codeline lineno="2099"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2101"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2102"><highlight class="normal"><ref refid="classcxxopts_1_1_option_adder" kindref="compound">OptionAdder</ref></highlight></codeline>
-<codeline lineno="2103" refid="classcxxopts_1_1_options_1a8c4fcf551295cde940a1a60012b3e9b6" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a8c4fcf551295cde940a1a60012b3e9b6" kindref="member">Options::add_options</ref>(std::string<sp/>group)</highlight></codeline>
-<codeline lineno="2104"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2105"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_option_adder" kindref="compound">OptionAdder</ref>(*</highlight><highlight class="keyword">this</highlight><highlight class="normal">,<sp/>std::move(group));</highlight></codeline>
-<codeline lineno="2106"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2108"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2109"><highlight class="normal"><ref refid="classcxxopts_1_1_option_adder" kindref="compound">OptionAdder</ref>&amp;</highlight></codeline>
-<codeline lineno="2110" refid="classcxxopts_1_1_option_adder_1a4feb747760c5fbaa807a4c8e1c335ac5" refkind="member"><highlight class="normal">OptionAdder::operator()</highlight></codeline>
-<codeline lineno="2111"><highlight class="normal">(</highlight></codeline>
-<codeline lineno="2112"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>opts,</highlight></codeline>
-<codeline lineno="2113"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>desc,</highlight></codeline>
-<codeline lineno="2114"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;const<sp/>Value&gt;&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,</highlight></codeline>
-<codeline lineno="2115"><highlight class="normal"><sp/><sp/>std::string<sp/>arg_help</highlight></codeline>
-<codeline lineno="2116"><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2117"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2118"><highlight class="normal"><sp/><sp/>std::string<sp/>short_sw,<sp/>long_sw;</highlight></codeline>
-<codeline lineno="2119"><highlight class="normal"><sp/><sp/>std::tie(short_sw,<sp/>long_sw)<sp/>=<sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a87d93ecf1931bfdf64feb40a008fa909" kindref="member">values::parser_tool::SplitSwitchDef</ref>(opts);</highlight></codeline>
-<codeline lineno="2120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2121"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!short_sw.length()<sp/>&amp;&amp;<sp/>!long_sw.length())</highlight></codeline>
-<codeline lineno="2122"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2123"><highlight class="normal"><sp/><sp/><sp/><sp/>throw_or_mimic&lt;invalid_option_format_error&gt;(opts);</highlight></codeline>
-<codeline lineno="2124"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2125"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(long_sw.length()<sp/>==<sp/>1<sp/>&amp;&amp;<sp/>short_sw.length())</highlight></codeline>
-<codeline lineno="2126"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2127"><highlight class="normal"><sp/><sp/><sp/><sp/>throw_or_mimic&lt;invalid_option_format_error&gt;(opts);</highlight></codeline>
-<codeline lineno="2128"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2129"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2130"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>option_names<sp/>=<sp/>[]</highlight></codeline>
-<codeline lineno="2131"><highlight class="normal"><sp/><sp/>(</highlight></codeline>
-<codeline lineno="2132"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;short_,</highlight></codeline>
-<codeline lineno="2133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>&amp;long_</highlight></codeline>
-<codeline lineno="2134"><highlight class="normal"><sp/><sp/>)</highlight></codeline>
-<codeline lineno="2135"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(long_.length()<sp/>==<sp/>1)</highlight></codeline>
-<codeline lineno="2137"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2138"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::make_tuple(long_,<sp/>short_);</highlight></codeline>
-<codeline lineno="2139"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2140"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>std::make_tuple(short_,<sp/>long_);</highlight></codeline>
-<codeline lineno="2141"><highlight class="normal"><sp/><sp/>}(short_sw,<sp/>long_sw);</highlight></codeline>
-<codeline lineno="2142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2143"><highlight class="normal"><sp/><sp/>m_options.add_option</highlight></codeline>
-<codeline lineno="2144"><highlight class="normal"><sp/><sp/>(</highlight></codeline>
-<codeline lineno="2145"><highlight class="normal"><sp/><sp/><sp/><sp/>m_group,</highlight></codeline>
-<codeline lineno="2146"><highlight class="normal"><sp/><sp/><sp/><sp/>std::get&lt;0&gt;(option_names),</highlight></codeline>
-<codeline lineno="2147"><highlight class="normal"><sp/><sp/><sp/><sp/>std::get&lt;1&gt;(option_names),</highlight></codeline>
-<codeline lineno="2148"><highlight class="normal"><sp/><sp/><sp/><sp/>desc,</highlight></codeline>
-<codeline lineno="2149"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,</highlight></codeline>
-<codeline lineno="2150"><highlight class="normal"><sp/><sp/><sp/><sp/>std::move(arg_help)</highlight></codeline>
-<codeline lineno="2151"><highlight class="normal"><sp/><sp/>);</highlight></codeline>
-<codeline lineno="2152"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2153"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2154"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2155"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2156"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2157"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2158" refid="classcxxopts_1_1_option_parser_1a28026f132e532009842f11359fb08373" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser_1a28026f132e532009842f11359fb08373" kindref="member">OptionParser::parse_default</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/>details)</highlight></codeline>
-<codeline lineno="2159"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2160"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>TODO:<sp/>remove<sp/>the<sp/>duplicate<sp/>code<sp/>here</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2161"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>store<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" kindref="member">m_parsed</ref>[details-&gt;hash()];</highlight></codeline>
-<codeline lineno="2162"><highlight class="normal"><sp/><sp/>store.parse_default(details);</highlight></codeline>
-<codeline lineno="2163"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1aeebe66824e25c8d466ecfd21c4234380" kindref="member">m_defaults</ref>.emplace_back(details-&gt;long_name(),<sp/>details-&gt;value().get_default_value());</highlight></codeline>
-<codeline lineno="2164"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2166"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2167"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2168" refid="classcxxopts_1_1_option_parser_1a80bbe1ff81b5d39bf6fda208e95a0d04" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser_1a80bbe1ff81b5d39bf6fda208e95a0d04" kindref="member">OptionParser::parse_no_value</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/>details)</highlight></codeline>
-<codeline lineno="2169"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2170"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>store<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" kindref="member">m_parsed</ref>[details-&gt;hash()];</highlight></codeline>
-<codeline lineno="2171"><highlight class="normal"><sp/><sp/>store.parse_no_value(details);</highlight></codeline>
-<codeline lineno="2172"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2173"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2174"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2175"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2176" refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">OptionParser::parse_option</ref></highlight></codeline>
-<codeline lineno="2177"><highlight class="normal">(</highlight></codeline>
-<codeline lineno="2178"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,</highlight></codeline>
-<codeline lineno="2179"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/></highlight><highlight class="comment">/*name*/</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="2180"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>arg</highlight></codeline>
-<codeline lineno="2181"><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2182"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2183"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>hash<sp/>=<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;hash();</highlight></codeline>
-<codeline lineno="2184"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>result<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" kindref="member">m_parsed</ref>[hash];</highlight></codeline>
-<codeline lineno="2185"><highlight class="normal"><sp/><sp/>result.parse(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>arg);</highlight></codeline>
-<codeline lineno="2186"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2187"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a5b4c043201d07e3a37a138313ea53fef" kindref="member">m_sequential</ref>.emplace_back(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;long_name(),<sp/>arg);</highlight></codeline>
-<codeline lineno="2188"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2189"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2190"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2191"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2192" refid="classcxxopts_1_1_option_parser_1a0c093ba32746de7c3b08715eab961aff" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser_1a0c093ba32746de7c3b08715eab961aff" kindref="member">OptionParser::checked_parse_arg</ref></highlight></codeline>
-<codeline lineno="2193"><highlight class="normal">(</highlight></codeline>
-<codeline lineno="2194"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>argc,</highlight></codeline>
-<codeline lineno="2195"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">*<sp/>argv,</highlight></codeline>
-<codeline lineno="2196"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>current,</highlight></codeline>
-<codeline lineno="2197"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,</highlight></codeline>
-<codeline lineno="2198"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name</highlight></codeline>
-<codeline lineno="2199"><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2200"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2201"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(current<sp/>+<sp/>1<sp/>&gt;=<sp/>argc)</highlight></codeline>
-<codeline lineno="2202"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2203"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;value().has_implicit())</highlight></codeline>
-<codeline lineno="2204"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">parse_option</ref>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>name,<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;value().get_implicit_value());</highlight></codeline>
-<codeline lineno="2206"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2207"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2208"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;missing_argument_exception&gt;(name);</highlight></codeline>
-<codeline lineno="2210"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2211"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2212"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2213"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2214"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;value().has_implicit())</highlight></codeline>
-<codeline lineno="2215"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2216"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">parse_option</ref>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>name,<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;value().get_implicit_value());</highlight></codeline>
-<codeline lineno="2217"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2218"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2219"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">parse_option</ref>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>name,<sp/>argv[current<sp/>+<sp/>1]);</highlight></codeline>
-<codeline lineno="2221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++current;</highlight></codeline>
-<codeline lineno="2222"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2223"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2224"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2225"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2226"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2227"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2228" refid="classcxxopts_1_1_option_parser_1a20b45a90265756b859aec3ebcbee8724" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser_1a20b45a90265756b859aec3ebcbee8724" kindref="member">OptionParser::add_to_option</ref>(OptionMap::const_iterator<sp/>iter,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>arg)</highlight></codeline>
-<codeline lineno="2229"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2230"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">parse_option</ref>(iter-&gt;second,<sp/>option,<sp/>arg);</highlight></codeline>
-<codeline lineno="2231"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2232"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2233"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2234"><highlight class="normal"></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2235" refid="classcxxopts_1_1_option_parser_1a4d595d8f6f34760bc2248d1b96af53a4" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser_1a4d595d8f6f34760bc2248d1b96af53a4" kindref="member">OptionParser::consume_positional</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>a,<sp/><ref refid="namespacecxxopts_1a89e13b1a05701bb8a4b6401fdbb1eb71" kindref="member">PositionalListIterator</ref>&amp;<sp/>next)</highlight></codeline>
-<codeline lineno="2236"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2237"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(next<sp/>!=<sp/><ref refid="classcxxopts_1_1_option_parser_1a424687c64b3524f638b2d26376ea39c3" kindref="member">m_positional</ref>.end())</highlight></codeline>
-<codeline lineno="2238"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2239"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>iter<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>.find(*next);</highlight></codeline>
-<codeline lineno="2240"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iter<sp/>!=<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>.end())</highlight></codeline>
-<codeline lineno="2241"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!iter-&gt;second-&gt;value().is_container())</highlight></codeline>
-<codeline lineno="2243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>result<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" kindref="member">m_parsed</ref>[iter-&gt;second-&gt;hash()];</highlight></codeline>
-<codeline lineno="2245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(result.count()<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="2246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a20b45a90265756b859aec3ebcbee8724" kindref="member">add_to_option</ref>(iter,<sp/>*next,<sp/>a);</highlight></codeline>
-<codeline lineno="2248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++next;</highlight></codeline>
-<codeline lineno="2249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++next;</highlight></codeline>
-<codeline lineno="2252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">continue</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a20b45a90265756b859aec3ebcbee8724" kindref="member">add_to_option</ref>(iter,<sp/>*next,<sp/>a);</highlight></codeline>
-<codeline lineno="2255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2256"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2257"><highlight class="normal"><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_not_exists_exception&gt;(*next);</highlight></codeline>
-<codeline lineno="2258"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2259"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2260"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2261"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2262"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2263"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2264"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2265" refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">Options::parse_positional</ref>(std::string<sp/>option)</highlight></codeline>
-<codeline lineno="2266"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2267"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">parse_positional</ref>(std::vector&lt;std::string&gt;{std::move(option)});</highlight></codeline>
-<codeline lineno="2268"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2269"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2270"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2271"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2272" refid="classcxxopts_1_1_options_1a9078209209185ac59cb6b293558919da" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">Options::parse_positional</ref>(std::vector&lt;std::string&gt;<sp/>options)</highlight></codeline>
-<codeline lineno="2273"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2274"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_options_1a2f7e42d87e511d25966cf48b504fa1f9" kindref="member">m_positional</ref><sp/>=<sp/>std::move(options);</highlight></codeline>
-<codeline lineno="2275"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2276"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_options_1ad9aeb1f3ce3755f6294442c419a414c1" kindref="member">m_positional_set</ref>.insert(<ref refid="classcxxopts_1_1_options_1a2f7e42d87e511d25966cf48b504fa1f9" kindref="member">m_positional</ref>.begin(),<sp/><ref refid="classcxxopts_1_1_options_1a2f7e42d87e511d25966cf48b504fa1f9" kindref="member">m_positional</ref>.end());</highlight></codeline>
-<codeline lineno="2277"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2278"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2279"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2280"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2281" refid="classcxxopts_1_1_options_1a21ddde716cb71a6ba1b7943e313a3398" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">Options::parse_positional</ref>(std::initializer_list&lt;std::string&gt;<sp/>options)</highlight></codeline>
-<codeline lineno="2282"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2283"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_options_1a08d69938b38f43d9bc534ec3b60e672b" kindref="member">parse_positional</ref>(std::vector&lt;std::string&gt;(options));</highlight></codeline>
-<codeline lineno="2284"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2285"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2286"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2287"><highlight class="normal"><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref></highlight></codeline>
-<codeline lineno="2288" refid="classcxxopts_1_1_options_1a3e740564cc4c991078f1451e1fcd082b" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a3e740564cc4c991078f1451e1fcd082b" kindref="member">Options::parse</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>argc,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">*<sp/>argv)</highlight></codeline>
-<codeline lineno="2289"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2290"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_option_parser" kindref="compound">OptionParser</ref><sp/>parser(*<ref refid="classcxxopts_1_1_options_1a6eda69429efb7bff7e3837c67c2953be" kindref="member">m_options</ref>,<sp/><ref refid="classcxxopts_1_1_options_1a2f7e42d87e511d25966cf48b504fa1f9" kindref="member">m_positional</ref>,<sp/><ref refid="classcxxopts_1_1_options_1a862b3814638d3a11f582c417e09f02fc" kindref="member">m_allow_unrecognised</ref>);</highlight></codeline>
-<codeline lineno="2291"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2292"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>parser.<ref refid="classcxxopts_1_1_option_parser_1a4218816ce33c211b54acb9e71603ea0b" kindref="member">parse</ref>(argc,<sp/>argv);</highlight></codeline>
-<codeline lineno="2293"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2294"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2295"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref></highlight></codeline>
-<codeline lineno="2296" refid="classcxxopts_1_1_option_parser_1a4218816ce33c211b54acb9e71603ea0b" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser_1a4218816ce33c211b54acb9e71603ea0b" kindref="member">OptionParser::parse</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>argc,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">*<sp/>argv)</highlight></codeline>
-<codeline lineno="2297"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2298"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>current<sp/>=<sp/>1;</highlight></codeline>
-<codeline lineno="2299"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>consume_remaining<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2300"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>next_positional<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a424687c64b3524f638b2d26376ea39c3" kindref="member">m_positional</ref>.<ref refid="classcxxopts_1_1_parse_result_1a04bc1c49adacb8ded2d4f615a1b8bc82" kindref="member">begin</ref>();</highlight></codeline>
-<codeline lineno="2301"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2302"><highlight class="normal"><sp/><sp/>std::vector&lt;std::string&gt;<sp/>unmatched;</highlight></codeline>
-<codeline lineno="2303"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2304"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(current<sp/>!=<sp/>argc)</highlight></codeline>
-<codeline lineno="2305"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2306"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(strcmp(argv[current],<sp/></highlight><highlight class="stringliteral">&quot;--&quot;</highlight><highlight class="normal">)<sp/>==<sp/>0)</highlight></codeline>
-<codeline lineno="2307"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>consume_remaining<sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++current;</highlight></codeline>
-<codeline lineno="2310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2311"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2312"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>matched<sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2313"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc" kindref="compound">values::parser_tool::ArguDesc</ref><sp/>argu_desc<sp/>=</highlight></codeline>
-<codeline lineno="2314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1_1values_1_1parser__tool_1a0c95fda26d85865d26182d1df061ed8a" kindref="member">values::parser_tool::ParseArgument</ref>(argv[current],<sp/>matched);</highlight></codeline>
-<codeline lineno="2315"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2316"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!matched)</highlight></codeline>
-<codeline lineno="2317"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//not<sp/>a<sp/>flag</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2319"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2320"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>but<sp/>if<sp/>it<sp/>starts<sp/>with<sp/>a<sp/>`-`,<sp/>then<sp/>it&apos;s<sp/>an<sp/>error</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2321"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(argv[current][0]<sp/>==<sp/></highlight><highlight class="charliteral">&apos;-&apos;</highlight><highlight class="normal"><sp/>&amp;&amp;<sp/>argv[current][1]<sp/>!=<sp/></highlight><highlight class="charliteral">&apos;\0&apos;</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="2322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="classcxxopts_1_1_option_parser_1a9603840d51c4695b3ad5258702c619d9" kindref="member">m_allow_unrecognised</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="2323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_syntax_exception&gt;(argv[current]);</highlight></codeline>
-<codeline lineno="2324"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2326"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//if<sp/>true<sp/>is<sp/>returned<sp/>here<sp/>then<sp/>it<sp/>was<sp/>consumed,<sp/>otherwise<sp/>it<sp/>is</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//ignored</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1_option_parser_1a4d595d8f6f34760bc2248d1b96af53a4" kindref="member">consume_positional</ref>(argv[current],<sp/>next_positional))</highlight></codeline>
-<codeline lineno="2330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unmatched.emplace_back(argv[current]);</highlight></codeline>
-<codeline lineno="2335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//if<sp/>we<sp/>return<sp/>from<sp/>here<sp/>then<sp/>it<sp/>was<sp/>parsed<sp/>successfully,<sp/>so<sp/>continue</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2337"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2338"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2339"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//short<sp/>or<sp/>long<sp/>option?</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a40b774c45dd1737936c205efa87168e4" kindref="member">grouping</ref>)</highlight></codeline>
-<codeline lineno="2342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>s<sp/>=<sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a35ee7f646c94992a633956cfb1807d70" kindref="member">arg_name</ref>;</highlight></codeline>
-<codeline lineno="2344"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(std::size_t<sp/>i<sp/>=<sp/>0;<sp/>i<sp/>!=<sp/>s.size();<sp/>++i)</highlight></codeline>
-<codeline lineno="2346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>name(1,<sp/>s[i]);</highlight></codeline>
-<codeline lineno="2348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>iter<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>.find(name);</highlight></codeline>
-<codeline lineno="2349"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2350"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iter<sp/>==<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>.end())</highlight></codeline>
-<codeline lineno="2351"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1_option_parser_1a9603840d51c4695b3ad5258702c619d9" kindref="member">m_allow_unrecognised</ref>)</highlight></codeline>
-<codeline lineno="2353"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2354"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unmatched.push_back(std::string(</highlight><highlight class="stringliteral">&quot;-&quot;</highlight><highlight class="normal">)<sp/>+<sp/>s[i]);</highlight></codeline>
-<codeline lineno="2355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">continue</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//error</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2358"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_not_exists_exception&gt;(name);</highlight></codeline>
-<codeline lineno="2359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2360"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2361"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref><sp/>=<sp/>iter-&gt;second;</highlight></codeline>
-<codeline lineno="2362"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2363"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i<sp/>+<sp/>1<sp/>==<sp/>s.size())</highlight></codeline>
-<codeline lineno="2364"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//it<sp/>must<sp/>be<sp/>the<sp/>last<sp/>argument</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2366"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a0c093ba32746de7c3b08715eab961aff" kindref="member">checked_parse_arg</ref>(argc,<sp/>argv,<sp/>current,<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>name);</highlight></codeline>
-<codeline lineno="2367"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;value().has_implicit())</highlight></codeline>
-<codeline lineno="2369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2370"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">parse_option</ref>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>name,<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;value().get_implicit_value());</highlight></codeline>
-<codeline lineno="2371"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i<sp/>+<sp/>1<sp/>&lt;<sp/>s.size())</highlight></codeline>
-<codeline lineno="2373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::string<sp/>arg_value<sp/>=<sp/>s.substr(i<sp/>+<sp/>1);</highlight></codeline>
-<codeline lineno="2375"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">parse_option</ref>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,<sp/>name,<sp/>arg_value);</highlight></codeline>
-<codeline lineno="2376"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2377"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2378"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//error</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2381"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_requires_argument_exception&gt;(name);</highlight></codeline>
-<codeline lineno="2382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2385"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a35ee7f646c94992a633956cfb1807d70" kindref="member">arg_name</ref>.length()<sp/>!=<sp/>0)</highlight></codeline>
-<codeline lineno="2386"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name<sp/>=<sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a35ee7f646c94992a633956cfb1807d70" kindref="member">arg_name</ref>;</highlight></codeline>
-<codeline lineno="2388"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2389"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>iter<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>.find(name);</highlight></codeline>
-<codeline lineno="2390"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(iter<sp/>==<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>.end())</highlight></codeline>
-<codeline lineno="2392"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2393"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1_option_parser_1a9603840d51c4695b3ad5258702c619d9" kindref="member">m_allow_unrecognised</ref>)</highlight></codeline>
-<codeline lineno="2394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2395"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>keep<sp/>unrecognised<sp/>options<sp/>in<sp/>argument<sp/>list,<sp/>skip<sp/>to<sp/>next<sp/>argument</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unmatched.emplace_back(argv[current]);</highlight></codeline>
-<codeline lineno="2397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>++current;</highlight></codeline>
-<codeline lineno="2398"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">continue</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2399"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2400"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//error</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_not_exists_exception&gt;(name);</highlight></codeline>
-<codeline lineno="2402"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2403"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>opt<sp/>=<sp/>iter-&gt;second;</highlight></codeline>
-<codeline lineno="2405"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2406"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//equals<sp/>provided<sp/>for<sp/>long<sp/>option?</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1a2bb71b16c97fa27af41d8d03bca1f06a" kindref="member">set_value</ref>)</highlight></codeline>
-<codeline lineno="2408"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//parse<sp/>the<sp/>option<sp/>given</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2410"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a07db7b6bb2095df7b75b50ed2311ffe5" kindref="member">parse_option</ref>(opt,<sp/>name,<sp/>argu_desc.<ref refid="structcxxopts_1_1values_1_1parser__tool_1_1_argu_desc_1ac60c40e3b9798897ebbfd76040eb2208" kindref="member">value</ref>);</highlight></codeline>
-<codeline lineno="2412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2415"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//parse<sp/>the<sp/>next<sp/>argument</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2416"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a0c093ba32746de7c3b08715eab961aff" kindref="member">checked_parse_arg</ref>(argc,<sp/>argv,<sp/>current,<sp/>opt,<sp/>name);</highlight></codeline>
-<codeline lineno="2417"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2418"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2419"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2420"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2421"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2422"><highlight class="normal"><sp/><sp/><sp/><sp/>++current;</highlight></codeline>
-<codeline lineno="2423"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2424"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2425"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>opt<sp/>:<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>)</highlight></codeline>
-<codeline lineno="2426"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2427"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>detail<sp/>=<sp/>opt.second;</highlight></codeline>
-<codeline lineno="2428"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref><sp/>=<sp/>detail-&gt;value();</highlight></codeline>
-<codeline lineno="2429"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2430"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>store<sp/>=<sp/><ref refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" kindref="member">m_parsed</ref>[detail-&gt;hash()];</highlight></codeline>
-<codeline lineno="2431"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2432"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>.has_default())<sp/>{</highlight></codeline>
-<codeline lineno="2433"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!store.count()<sp/>&amp;&amp;<sp/>!store.has_default())<sp/>{</highlight></codeline>
-<codeline lineno="2434"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a28026f132e532009842f11359fb08373" kindref="member">parse_default</ref>(detail);</highlight></codeline>
-<codeline lineno="2435"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2436"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2437"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="2438"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a80bbe1ff81b5d39bf6fda208e95a0d04" kindref="member">parse_no_value</ref>(detail);</highlight></codeline>
-<codeline lineno="2439"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2440"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2441"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2442"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(consume_remaining)</highlight></codeline>
-<codeline lineno="2443"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2444"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(current<sp/>&lt;<sp/>argc)</highlight></codeline>
-<codeline lineno="2445"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="classcxxopts_1_1_option_parser_1a4d595d8f6f34760bc2248d1b96af53a4" kindref="member">consume_positional</ref>(argv[current],<sp/>next_positional))<sp/>{</highlight></codeline>
-<codeline lineno="2447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">break</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2448"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++current;</highlight></codeline>
-<codeline lineno="2450"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2451"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2452"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//adjust<sp/>argv<sp/>for<sp/>any<sp/>that<sp/>couldn&apos;t<sp/>be<sp/>swallowed</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2453"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal"><sp/>(current<sp/>!=<sp/>argc)<sp/>{</highlight></codeline>
-<codeline lineno="2454"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>unmatched.emplace_back(argv[current]);</highlight></codeline>
-<codeline lineno="2455"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>++current;</highlight></codeline>
-<codeline lineno="2456"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2457"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2458"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2459"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a375fff61bb08268e6deb81baa0514b27" kindref="member">finalise_aliases</ref>();</highlight></codeline>
-<codeline lineno="2460"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2461"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_parse_result" kindref="compound">ParseResult</ref><sp/>parsed(std::move(<ref refid="classcxxopts_1_1_option_parser_1a55888886d57470ca84f908948b39fe6b" kindref="member">m_keys</ref>),<sp/>std::move(<ref refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" kindref="member">m_parsed</ref>),<sp/>std::move(<ref refid="classcxxopts_1_1_option_parser_1a5b4c043201d07e3a37a138313ea53fef" kindref="member">m_sequential</ref>),<sp/>std::move(<ref refid="classcxxopts_1_1_option_parser_1aeebe66824e25c8d466ecfd21c4234380" kindref="member">m_defaults</ref>),<sp/>std::move(unmatched));</highlight></codeline>
-<codeline lineno="2462"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>parsed;</highlight></codeline>
-<codeline lineno="2463"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2464"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2465"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2466"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2467" refid="classcxxopts_1_1_option_parser_1a375fff61bb08268e6deb81baa0514b27" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_option_parser_1a375fff61bb08268e6deb81baa0514b27" kindref="member">OptionParser::finalise_aliases</ref>()</highlight></codeline>
-<codeline lineno="2468"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2469"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>option:<sp/><ref refid="classcxxopts_1_1_option_parser_1a1daaa87be1a5f6cc379f880e916b9958" kindref="member">m_options</ref>)</highlight></codeline>
-<codeline lineno="2470"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2471"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>detail<sp/>=<sp/>*option.second;</highlight></codeline>
-<codeline lineno="2472"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>hash<sp/>=<sp/>detail.hash();</highlight></codeline>
-<codeline lineno="2473"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a55888886d57470ca84f908948b39fe6b" kindref="member">m_keys</ref>[detail.short_name()]<sp/>=<sp/>hash;</highlight></codeline>
-<codeline lineno="2474"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a55888886d57470ca84f908948b39fe6b" kindref="member">m_keys</ref>[detail.long_name()]<sp/>=<sp/>hash;</highlight></codeline>
-<codeline lineno="2475"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2476"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_option_parser_1a941358c67afc74005bdd779c39c9ed44" kindref="member">m_parsed</ref>.emplace(hash,<sp/><ref refid="classcxxopts_1_1_option_value" kindref="compound">OptionValue</ref>());</highlight></codeline>
-<codeline lineno="2477"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2478"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2479"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2480"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2481"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2482" refid="classcxxopts_1_1_options_1ac698adfe5b5ca50d36017a52b27fb828" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1ac698adfe5b5ca50d36017a52b27fb828" kindref="member">Options::add_option</ref></highlight></codeline>
-<codeline lineno="2483"><highlight class="normal">(</highlight></codeline>
-<codeline lineno="2484"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>group,</highlight></codeline>
-<codeline lineno="2485"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="structcxxopts_1_1_option" kindref="compound">Option</ref>&amp;<sp/>option</highlight></codeline>
-<codeline lineno="2486"><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2487"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2488"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a8c4fcf551295cde940a1a60012b3e9b6" kindref="member">add_options</ref>(group,<sp/>{option});</highlight></codeline>
-<codeline lineno="2489"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2490"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2491"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2492"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2493" refid="classcxxopts_1_1_options_1af6a920c65d1a22140278b8f2637f8930" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1ac698adfe5b5ca50d36017a52b27fb828" kindref="member">Options::add_option</ref></highlight></codeline>
-<codeline lineno="2494"><highlight class="normal">(</highlight></codeline>
-<codeline lineno="2495"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>group,</highlight></codeline>
-<codeline lineno="2496"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>s,</highlight></codeline>
-<codeline lineno="2497"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>l,</highlight></codeline>
-<codeline lineno="2498"><highlight class="normal"><sp/><sp/>std::string<sp/>desc,</highlight></codeline>
-<codeline lineno="2499"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;const<sp/>Value&gt;&amp;<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>,</highlight></codeline>
-<codeline lineno="2500"><highlight class="normal"><sp/><sp/>std::string<sp/>arg_help</highlight></codeline>
-<codeline lineno="2501"><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2502"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2503"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>stringDesc<sp/>=<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(std::move(desc));</highlight></codeline>
-<codeline lineno="2504"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>option<sp/>=<sp/>std::make_shared&lt;OptionDetails&gt;(s,<sp/>l,<sp/>stringDesc,<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>);</highlight></codeline>
-<codeline lineno="2505"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2506"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!s.empty())</highlight></codeline>
-<codeline lineno="2507"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2508"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a6a7ca6845bfe17a801b0c3f229655f42" kindref="member">add_one_option</ref>(s,<sp/>option);</highlight></codeline>
-<codeline lineno="2509"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2510"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2511"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!l.empty())</highlight></codeline>
-<codeline lineno="2512"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2513"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a6a7ca6845bfe17a801b0c3f229655f42" kindref="member">add_one_option</ref>(l,<sp/>option);</highlight></codeline>
-<codeline lineno="2514"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2515"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2516"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_options_1a7408c12072b6d9a6cb7581ec17b48a1e" kindref="member">m_option_list</ref>.push_front(*option.get());</highlight></codeline>
-<codeline lineno="2517"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>iter<sp/>=<sp/><ref refid="classcxxopts_1_1_options_1a7408c12072b6d9a6cb7581ec17b48a1e" kindref="member">m_option_list</ref>.begin();</highlight></codeline>
-<codeline lineno="2518"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_options_1adc78b18ef63a36a06c3311e6c56b9ebb" kindref="member">m_option_map</ref>[s]<sp/>=<sp/>iter;</highlight></codeline>
-<codeline lineno="2519"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_options_1adc78b18ef63a36a06c3311e6c56b9ebb" kindref="member">m_option_map</ref>[l]<sp/>=<sp/>iter;</highlight></codeline>
-<codeline lineno="2520"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2521"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//add<sp/>the<sp/>help<sp/>details</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2522"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>options<sp/>=<sp/><ref refid="classcxxopts_1_1_options_1a5df536e6ca2018564263e350c2ed8679" kindref="member">m_help</ref>[group];</highlight></codeline>
-<codeline lineno="2523"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2524"><highlight class="normal"><sp/><sp/>options.options.emplace_back(<ref refid="structcxxopts_1_1_help_option_details" kindref="compound">HelpOptionDetails</ref>{s,<sp/>l,<sp/>stringDesc,</highlight></codeline>
-<codeline lineno="2525"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;<ref refid="structcxxopts_1_1_help_option_details_1ac869dd2ac03fc090f34bce1907f5edd5" kindref="member">has_default</ref>(),<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;get_default_value(),</highlight></codeline>
-<codeline lineno="2526"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;has_implicit(),<sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;get_implicit_value(),</highlight></codeline>
-<codeline lineno="2527"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>std::move(arg_help),</highlight></codeline>
-<codeline lineno="2528"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;is_container(),</highlight></codeline>
-<codeline lineno="2529"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6b58e451713ebbf12866c1cd8e0a66ab" kindref="member">value</ref>-&gt;is_boolean()});</highlight></codeline>
-<codeline lineno="2530"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2531"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2532"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2533"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2534" refid="classcxxopts_1_1_options_1a6a7ca6845bfe17a801b0c3f229655f42" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a6a7ca6845bfe17a801b0c3f229655f42" kindref="member">Options::add_one_option</ref></highlight></codeline>
-<codeline lineno="2535"><highlight class="normal">(</highlight></codeline>
-<codeline lineno="2536"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>option,</highlight></codeline>
-<codeline lineno="2537"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;OptionDetails&gt;&amp;<sp/>details</highlight></codeline>
-<codeline lineno="2538"><highlight class="normal">)</highlight></codeline>
-<codeline lineno="2539"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2540"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>in<sp/>=<sp/><ref refid="classcxxopts_1_1_options_1a6eda69429efb7bff7e3837c67c2953be" kindref="member">m_options</ref>-&gt;emplace(option,<sp/>details);</highlight></codeline>
-<codeline lineno="2541"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2542"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!in.second)</highlight></codeline>
-<codeline lineno="2543"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2544"><highlight class="normal"><sp/><sp/><sp/><sp/>throw_or_mimic&lt;option_exists_error&gt;(option);</highlight></codeline>
-<codeline lineno="2545"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2546"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2547"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2548"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2549"><highlight class="normal"><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref></highlight></codeline>
-<codeline lineno="2550" refid="classcxxopts_1_1_options_1a7a9611069d511f815c71a1f4aca302eb" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a7a9611069d511f815c71a1f4aca302eb" kindref="member">Options::help_one_group</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>g)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="2551"><highlight class="keyword"></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2552"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal">OptionHelp<sp/>=<sp/>std::vector&lt;std::pair&lt;String,<sp/>String&gt;&gt;;</highlight></codeline>
-<codeline lineno="2553"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2554"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>group<sp/>=<sp/><ref refid="classcxxopts_1_1_options_1a5df536e6ca2018564263e350c2ed8679" kindref="member">m_help</ref>.find(g);</highlight></codeline>
-<codeline lineno="2555"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(group<sp/>==<sp/><ref refid="classcxxopts_1_1_options_1a5df536e6ca2018564263e350c2ed8679" kindref="member">m_help</ref>.end())</highlight></codeline>
-<codeline lineno="2556"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2557"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2558"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2559"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2560"><highlight class="normal"><sp/><sp/>OptionHelp<sp/>format;</highlight></codeline>
-<codeline lineno="2561"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2562"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>longest<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="2563"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2564"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>result;</highlight></codeline>
-<codeline lineno="2565"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2566"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!g.empty())</highlight></codeline>
-<codeline lineno="2567"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2568"><highlight class="normal"><sp/><sp/><sp/><sp/>result<sp/>+=<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(</highlight><highlight class="stringliteral">&quot;<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/>g<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>options:\n&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="2569"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2570"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2571"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>o<sp/>:<sp/>group-&gt;second.options)</highlight></codeline>
-<codeline lineno="2572"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2573"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1_options_1ad9aeb1f3ce3755f6294442c419a414c1" kindref="member">m_positional_set</ref>.find(o.l)<sp/>!=<sp/><ref refid="classcxxopts_1_1_options_1ad9aeb1f3ce3755f6294442c419a414c1" kindref="member">m_positional_set</ref>.end()<sp/>&amp;&amp;</highlight></codeline>
-<codeline lineno="2574"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>!<ref refid="classcxxopts_1_1_options_1ae0a47e72e50fc46543bc1bce186fe66a" kindref="member">m_show_positional</ref>)</highlight></codeline>
-<codeline lineno="2575"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2576"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">continue</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2577"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2578"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2579"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>s<sp/>=<sp/>format_option(o);</highlight></codeline>
-<codeline lineno="2580"><highlight class="normal"><sp/><sp/><sp/><sp/>longest<sp/>=<sp/>(std::max)(longest,<sp/><ref refid="namespacecxxopts_1a6e40a21a193047cd4575ac90411ca295" kindref="member">stringLength</ref>(s));</highlight></codeline>
-<codeline lineno="2581"><highlight class="normal"><sp/><sp/><sp/><sp/>format.push_back(std::make_pair(s,<sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>()));</highlight></codeline>
-<codeline lineno="2582"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2583"><highlight class="normal"><sp/><sp/>longest<sp/>=<sp/>(std::min)(longest,<sp/>OPTION_LONGEST);</highlight></codeline>
-<codeline lineno="2584"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2585"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//widest<sp/>allowed<sp/>description<sp/>--<sp/>min<sp/>10<sp/>chars<sp/>for<sp/>helptext/line</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2586"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>allowed<sp/>=<sp/>10;</highlight></codeline>
-<codeline lineno="2587"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1_options_1a195a58cf2247ca00746c647f942a5fda" kindref="member">m_width</ref><sp/>&gt;<sp/>allowed<sp/>+<sp/>longest<sp/>+<sp/>OPTION_DESC_GAP)</highlight></codeline>
-<codeline lineno="2588"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2589"><highlight class="normal"><sp/><sp/><sp/><sp/>allowed<sp/>=<sp/><ref refid="classcxxopts_1_1_options_1a195a58cf2247ca00746c647f942a5fda" kindref="member">m_width</ref><sp/>-<sp/>longest<sp/>-<sp/>OPTION_DESC_GAP;</highlight></codeline>
-<codeline lineno="2590"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2591"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2592"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>fiter<sp/>=<sp/>format.begin();</highlight></codeline>
-<codeline lineno="2593"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal">&amp;<sp/>o<sp/>:<sp/>group-&gt;second.options)</highlight></codeline>
-<codeline lineno="2594"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2595"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classcxxopts_1_1_options_1ad9aeb1f3ce3755f6294442c419a414c1" kindref="member">m_positional_set</ref>.find(o.l)<sp/>!=<sp/><ref refid="classcxxopts_1_1_options_1ad9aeb1f3ce3755f6294442c419a414c1" kindref="member">m_positional_set</ref>.end()<sp/>&amp;&amp;</highlight></codeline>
-<codeline lineno="2596"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>!<ref refid="classcxxopts_1_1_options_1ae0a47e72e50fc46543bc1bce186fe66a" kindref="member">m_show_positional</ref>)</highlight></codeline>
-<codeline lineno="2597"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2598"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">continue</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2599"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2600"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2601"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>d<sp/>=<sp/>format_description(o,<sp/>longest<sp/>+<sp/>OPTION_DESC_GAP,<sp/>allowed,<sp/><ref refid="classcxxopts_1_1_options_1ad8a944b69e10ac5ac5c163a1415088f1" kindref="member">m_tab_expansion</ref>);</highlight></codeline>
-<codeline lineno="2602"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2603"><highlight class="normal"><sp/><sp/><sp/><sp/>result<sp/>+=<sp/>fiter-&gt;first;</highlight></codeline>
-<codeline lineno="2604"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="namespacecxxopts_1a6e40a21a193047cd4575ac90411ca295" kindref="member">stringLength</ref>(fiter-&gt;first)<sp/>&gt;<sp/>longest)</highlight></codeline>
-<codeline lineno="2605"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2606"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/></highlight><highlight class="charliteral">&apos;\n&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2607"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(std::string(longest<sp/>+<sp/>OPTION_DESC_GAP,<sp/></highlight><highlight class="charliteral">&apos;<sp/>&apos;</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="2608"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2609"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2610"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2611"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(std::string(longest<sp/>+<sp/>OPTION_DESC_GAP<sp/>-</highlight></codeline>
-<codeline lineno="2612"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1a6e40a21a193047cd4575ac90411ca295" kindref="member">stringLength</ref>(fiter-&gt;first),</highlight></codeline>
-<codeline lineno="2613"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="charliteral">&apos;<sp/>&apos;</highlight><highlight class="normal">));</highlight></codeline>
-<codeline lineno="2614"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2615"><highlight class="normal"><sp/><sp/><sp/><sp/>result<sp/>+=<sp/>d;</highlight></codeline>
-<codeline lineno="2616"><highlight class="normal"><sp/><sp/><sp/><sp/>result<sp/>+=<sp/></highlight><highlight class="charliteral">&apos;\n&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2617"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2618"><highlight class="normal"><sp/><sp/><sp/><sp/>++fiter;</highlight></codeline>
-<codeline lineno="2619"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2620"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2621"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>result;</highlight></codeline>
-<codeline lineno="2622"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2623"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2624"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2625"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2626" refid="classcxxopts_1_1_options_1ab09329dad31b464891556a4cd2659d04" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1ab09329dad31b464891556a4cd2659d04" kindref="member">Options::generate_group_help</ref></highlight></codeline>
-<codeline lineno="2627"><highlight class="normal">(</highlight></codeline>
-<codeline lineno="2628"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>result,</highlight></codeline>
-<codeline lineno="2629"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/>print_groups</highlight></codeline>
-<codeline lineno="2630"><highlight class="normal">)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="2631"><highlight class="keyword"></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2632"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>i<sp/>=<sp/>0;<sp/>i<sp/>!=<sp/>print_groups.size();<sp/>++i)</highlight></codeline>
-<codeline lineno="2633"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2634"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>group_help_text<sp/>=<sp/><ref refid="classcxxopts_1_1_options_1a7a9611069d511f815c71a1f4aca302eb" kindref="member">help_one_group</ref>(print_groups[i]);</highlight></codeline>
-<codeline lineno="2635"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="namespacecxxopts_1a3ffde9e4565bba175bd56c06c0f99162" kindref="member">empty</ref>(group_help_text))</highlight></codeline>
-<codeline lineno="2636"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2637"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">continue</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2638"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2639"><highlight class="normal"><sp/><sp/><sp/><sp/>result<sp/>+=<sp/>group_help_text;</highlight></codeline>
-<codeline lineno="2640"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i<sp/>&lt;<sp/>print_groups.size()<sp/>-<sp/>1)</highlight></codeline>
-<codeline lineno="2641"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2642"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>result<sp/>+=<sp/></highlight><highlight class="charliteral">&apos;\n&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="2643"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2644"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2645"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2646"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2647"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2648"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2649" refid="classcxxopts_1_1_options_1adc15c2e713a3c026c7a25e83612ec247" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1adc15c2e713a3c026c7a25e83612ec247" kindref="member">Options::generate_all_groups_help</ref>(<ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref>&amp;<sp/>result)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="2650"><highlight class="keyword"></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2651"><highlight class="normal"><sp/><sp/>std::vector&lt;std::string&gt;<sp/>all_groups;</highlight></codeline>
-<codeline lineno="2652"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2653"><highlight class="normal"><sp/><sp/>std::transform(</highlight></codeline>
-<codeline lineno="2654"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a5df536e6ca2018564263e350c2ed8679" kindref="member">m_help</ref>.begin(),</highlight></codeline>
-<codeline lineno="2655"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classcxxopts_1_1_options_1a5df536e6ca2018564263e350c2ed8679" kindref="member">m_help</ref>.end(),</highlight></codeline>
-<codeline lineno="2656"><highlight class="normal"><sp/><sp/><sp/><sp/>std::back_inserter(all_groups),</highlight></codeline>
-<codeline lineno="2657"><highlight class="normal"><sp/><sp/><sp/><sp/>[]<sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::map&lt;std::string,<sp/>HelpGroupDetails&gt;::value_type&amp;<sp/>group)</highlight></codeline>
-<codeline lineno="2658"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="2659"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>return<sp/>group.first;</highlight></codeline>
-<codeline lineno="2660"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="2661"><highlight class="normal"><sp/><sp/>);</highlight></codeline>
-<codeline lineno="2662"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2663"><highlight class="normal"><sp/><sp/><ref refid="classcxxopts_1_1_options_1ab09329dad31b464891556a4cd2659d04" kindref="member">generate_group_help</ref>(result,<sp/>all_groups);</highlight></codeline>
-<codeline lineno="2664"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="2665"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2666"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2667"><highlight class="normal">std::string</highlight></codeline>
-<codeline lineno="2668" refid="classcxxopts_1_1_options_1a7392b09071f42ed45dea85738af965b4" refkind="member"><highlight class="normal"><ref refid="classcxxopts_1_1_options_1a7392b09071f42ed45dea85738af965b4" kindref="member">Options::help</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;std::string&gt;&amp;<sp/>help_groups)</highlight><highlight class="keyword"><sp/>const</highlight></codeline>
-<codeline lineno="2669"><highlight class="keyword"></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="2670"><highlight class="normal"><sp/><sp/><ref refid="namespacecxxopts_1a0ae1a379f800ffc427fa06539fb72b2f" kindref="member">String</ref><sp/>result<sp/>=<sp/><ref refid="classcxxopts_1_1_options_1a415a57d6ed9bac80126e1b9d5e8b800f" kindref="member">m_help_string</ref><sp/>+<sp/></highlight><highlight class="stringliteral">&quot;\nUsage:\n<sp/><sp/>&quot;</highlight><highlight class="normal"><sp/>+</highlight></codeline>
-<codeline lineno="2671"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(<ref refid="classcxxopts_1_1_options_1a49f97b72bcc81357c9df0cbc657bb3a7" kindref="member">m_program</ref>)<sp/>+<sp/></highlight><highlight class="stringliteral">&quot;<sp/>&quot;</highlight><highlight class="normal"><sp/>+<sp/><ref refid="namespacecxxopts_1ac8ee50fdeb30245d157343a3bade9ede" kindref="member">toLocalString</ref>(<ref refid="classcxxopts_1_1_options_1a32488bc1b1581d80b90a8a476fbeb1c4" kindref="member">m_custom_help</ref>);</highlight></codeline>
-<codeline lineno="2672"><highlight class="normal"></highlight></codeline>
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deleted file mode 100644
index 11e0bf9..0000000
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deleted file mode 100644
index cbe969a..0000000
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deleted file mode 100644
index b51ec3b..0000000
--- a/doxyxml/dir_bc1ea1dd34437456447120be9e7e4b32.xml
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deleted file mode 100644
index ceaaf84..0000000
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deleted file mode 100644
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diff --git a/doxyxml/expand_8_h.xml b/doxyxml/expand_8_h.xml
deleted file mode 100644
index 662b164..0000000
--- a/doxyxml/expand_8_h.xml
+++ /dev/null
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-<para>This routine is an NBODY code whose force calculation is based on a biorthogonal phase-space expansion; for now, the expansion set is based on the eigenfunctions of the spherical Laplacian: <verbatim>       Y_{lm} * j_n
-         ^       ^
-         |       |
-         |       spherical Bessel functions
-         | spherical harmonics
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-<title>Call sequence:</title>
-<para>exp [-f parameter file] [ [keyword=value] [keyword=value] ... ]</para>
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-<title>Parameters:</title>
-<para>The parameter file may be used instead of the keyword/value pairs. The available keywords are:</para>
-<para>KEYWORD EXPLANATION DEFAULT <hruler/>
- lmax = maximum harmonic order 4 nmax = maximum radial order 18 nlog = interval between log output 10 nlist = interval between p-s output 50 nsteps = total number of steps to run 500 fixacc = add off set to acceleration to conserve momentum 1 (1=yes 0=no) selfgrav = turn-on self-gravity 1 outbods = output phase space 1 outengy = output per particle energies 0 diag = diagnostic output 0 dtime = time step 0.1 rmax = maximum radial extent (computed from input) logfile = logfile name LOG.FILE infile = input parameter file IN.FILE outname = output file prefix OUT parmfile = parameter file name PARMS.FILE</para>
-<para>$Id$ </para>
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-        <location file="/home/weinberg/Projects/EXP/src/expand.H" line="119" column="8" declfile="/home/weinberg/Projects/EXP/src/expand.H" declline="119" declcolumn="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_expand_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_expand_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;config_exp.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="expand_8_h_1ab67f49e412705befeaa20562f6bace06" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>BSD_SOURCE</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;mpi.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;pthread.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;stdexcept&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstdlib&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstring&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;sstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;limits&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">std;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>USE_DMALLOC</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;dmalloc.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Turn<sp/>on<sp/>sequence<sp/>checking<sp/>on<sp/>debug</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>DEBUG</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>SEQCHECK</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Function<sp/>declarations</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="expand_8_h_1a17631e8bd17ac8860b587c7c7f46109c" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a17631e8bd17ac8860b587c7c7f46109c" kindref="member">init_velocity</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="89" refid="expand_8_h_1a5f739c0390c4e3af9be40c62f5fd75ed" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a5f739c0390c4e3af9be40c62f5fd75ed" kindref="member">begin_run</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="90" refid="expand_8_h_1a2921b9196d1c435d169f621f3ce0a8f1" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a2921b9196d1c435d169f621f3ce0a8f1" kindref="member">incr_position</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dt,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlevel=0);</highlight></codeline>
-<codeline lineno="91" refid="expand_8_h_1a387e0113da253aa40ae926bf57ab1182" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a387e0113da253aa40ae926bf57ab1182" kindref="member">incr_velocity</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dt,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mlevel=0);</highlight></codeline>
-<codeline lineno="92" refid="expand_8_h_1a2f871c29ec4b193ae67ce86b4d7d2168" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a2f871c29ec4b193ae67ce86b4d7d2168" kindref="member">incr_com_position</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dt);</highlight></codeline>
-<codeline lineno="93" refid="expand_8_h_1a7644124a5b1882ed9bba4ca676a33004" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a7644124a5b1882ed9bba4ca676a33004" kindref="member">incr_com_velocity</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dt);</highlight></codeline>
-<codeline lineno="94" refid="expand_8_h_1a97e218c730e4eec80a6196f7efb84ac8" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a97e218c730e4eec80a6196f7efb84ac8" kindref="member">write_parm</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="95" refid="expand_8_h_1af3a8b4c3c90489cea7f78c3b96c03319" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1af3a8b4c3c90489cea7f78c3b96c03319" kindref="member">initialize_multistep</ref>();</highlight></codeline>
-<codeline lineno="96" refid="expand_8_h_1a754e02fb4307a07f2717562067e9a711" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a754e02fb4307a07f2717562067e9a711" kindref="member">sync_eval_multistep</ref>();</highlight></codeline>
-<codeline lineno="97" refid="expand_8_h_1a2be7261d2c5b321388a3a465fcc6c5f3" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a2be7261d2c5b321388a3a465fcc6c5f3" kindref="member">adjust_multistep_level</ref>();</highlight></codeline>
-<codeline lineno="98" refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aabd39b8eecb8cb426592ccefd1e5e5b6" kindref="member">initialize_cuda</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>MAX</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="103" refid="expand_8_h_1ad935f1ff1a50822e317bdb321ce991ad" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>MAX(A,B)<sp/>(A&gt;B<sp/>?<sp/>A<sp/>:<sp/>B)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>MIN</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="expand_8_h_1adcd021ac91d43a62b2cdecf9a5b971a7" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>MIN(A,B)<sp/>(A&lt;B<sp/>?<sp/>A<sp/>:<sp/>B)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight><highlight class="comment">//*****Stuff<sp/>for<sp/>expand.c*****</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="expand_8_h_1acae75336d7f93ec43e8151678f65a72e" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1acae75336d7f93ec43e8151678f65a72e" kindref="member">get_dens</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*coef);</highlight></codeline>
-<codeline lineno="112" refid="expand_8_h_1af88a260cf1ae1622666e784e70780c70" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1af88a260cf1ae1622666e784e70780c70" kindref="member">densi</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rr,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n),<ref refid="expand_8_h_1ad23f325ac4be31338f7aee5cb07e159b" kindref="member">potli</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rr,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="113" refid="expand_8_h_1a25ff187cc18b5614106e1f5e1dc157a0" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a25ff187cc18b5614106e1f5e1dc157a0" kindref="member">make_grid</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>lmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nmax);</highlight></codeline>
-<codeline lineno="114" refid="expand_8_h_1af5ca8ebfd0d974c3a97ad02022938150" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1af5ca8ebfd0d974c3a97ad02022938150" kindref="member">get_potacc</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*coef,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*dp);</highlight></codeline>
-<codeline lineno="115" refid="expand_8_h_1a641917a78e19e88a42271a8cffeda925" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a641917a78e19e88a42271a8cffeda925" kindref="member">set_global_com</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="116" refid="expand_8_h_1a149f7f86106e48afbdc7d180578cf348" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a149f7f86106e48afbdc7d180578cf348" kindref="member">create_tipsy</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight><highlight class="comment">//******Mathematical<sp/>utilities******</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="119" refid="expand_8_h_1a6e0f498dcf0bee81ec1da49b80fcd0ed" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a6e0f498dcf0bee81ec1da49b80fcd0ed" kindref="member">zbrent</ref>();</highlight></codeline>
-<codeline lineno="120" refid="expand_8_h_1ac71f6f2a8ff6951d6edb09d4c53b535a" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;C&quot;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ac71f6f2a8ff6951d6edb09d4c53b535a" kindref="member">dgammln</ref>();</highlight></codeline>
-<codeline lineno="121" refid="expand_8_h_1af2f4ae87f03750cb9cca117d0cfcf2fb" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1af2f4ae87f03750cb9cca117d0cfcf2fb" kindref="member">locate</ref>();</highlight></codeline>
-<codeline lineno="122" refid="expand_8_h_1afafcb9b8728162991baeec65e7cf5ab9" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1afafcb9b8728162991baeec65e7cf5ab9" kindref="member">plgndr</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="123" refid="expand_8_h_1a8ed48869a8e12ee6a57c5387755e58fa" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a8ed48869a8e12ee6a57c5387755e58fa" kindref="member">dplgndr</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="124" refid="expand_8_h_1ad912a662af91c94aab43271eb3d1ba92" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ad912a662af91c94aab43271eb3d1ba92" kindref="member">factrl</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n);</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Constants</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"></highlight></codeline>
-<codeline lineno="130" refid="expand_8_h_1aa1cc8718b17bb81c90c7075d1fa97424" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aa1cc8718b17bb81c90c7075d1fa97424" kindref="member">DSMALL</ref><sp/>=<sp/>1.0e-16;</highlight></codeline>
-<codeline lineno="131" refid="expand_8_h_1a3729a2d83d6e49a2a5580fb26119da2f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="expand_8_h_1a3729a2d83d6e49a2a5580fb26119da2f" kindref="member">mdtDim</ref><sp/>=<sp/>7;</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Parallel<sp/>prototypes</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="135"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="136"><highlight class="normal"></highlight></codeline>
-<codeline lineno="137" refid="expand_8_h_1a819df5e45f63ad305a9e95b28dd9a20a" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a819df5e45f63ad305a9e95b28dd9a20a" kindref="member">setup_distribution</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="138" refid="expand_8_h_1a5ab9de9467ece151f426400763d57547" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a5ab9de9467ece151f426400763d57547" kindref="member">redistribute_particles</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="139" refid="expand_8_h_1aeb20c799c8af9379f57d8e537c027a77" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aeb20c799c8af9379f57d8e537c027a77" kindref="member">test_mpi</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="140" refid="expand_8_h_1a59027eeb222cd59aa1b95600f46af2c2" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a59027eeb222cd59aa1b95600f46af2c2" kindref="member">parallel_gather_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="141" refid="expand_8_h_1a5fc71ed0c35b7440efe60f7f763771a1" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a5fc71ed0c35b7440efe60f7f763771a1" kindref="member">parallel_distribute_coefficients</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="142" refid="expand_8_h_1aa97d9b29e1ba1546fc2a5db8d6d01787" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aa97d9b29e1ba1546fc2a5db8d6d01787" kindref="member">recompute_processor_rates</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="143" refid="expand_8_h_1a8a7a85aa71187c1a18018773c214c252" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a8a7a85aa71187c1a18018773c214c252" kindref="member">MPL_reset_timer</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="144" refid="expand_8_h_1a7790a8b3c8bfb9297703585692b75cd3" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a7790a8b3c8bfb9297703585692b75cd3" kindref="member">MPL_start_timer</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="145" refid="expand_8_h_1ac754e013c15f2bc331f9ea74c94d0317" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ac754e013c15f2bc331f9ea74c94d0317" kindref="member">MPL_stop_timer</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="146" refid="expand_8_h_1a697a074751116782d2234456c298a51b" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a697a074751116782d2234456c298a51b" kindref="member">MPL_read_timer</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>reset);</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Utilities</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="150"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight></codeline>
-<codeline lineno="152" refid="expand_8_h_1aed8de3eb31c43b0b3865babd3e756a90" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1aed8de3eb31c43b0b3865babd3e756a90" kindref="member">get_ultra</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nmax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::VectorXd&amp;<sp/>p);</highlight></codeline>
-<codeline lineno="153" refid="expand_8_h_1a55432c0ec4732f941644f0bec753bb6d" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a55432c0ec4732f941644f0bec753bb6d" kindref="member">trimRight</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="154" refid="expand_8_h_1a2713d01555ac0139d34974be62cc15cf" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a2713d01555ac0139d34974be62cc15cf" kindref="member">trimLeft</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="155" refid="expand_8_h_1ae167d6d12c65f490523c0f9a97109f42" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ae167d6d12c65f490523c0f9a97109f42" kindref="member">trimComment</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="156" refid="expand_8_h_1a34788a4951c943da34b3edc632e133d9" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a34788a4951c943da34b3edc632e133d9" kindref="member">atof</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>s)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a34788a4951c943da34b3edc632e133d9" kindref="member">atof</ref>(s.c_str());}</highlight></codeline>
-<codeline lineno="157" refid="expand_8_h_1ae3e23f0c0cd22fcc076fea458d657d42" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ae3e23f0c0cd22fcc076fea458d657d42" kindref="member">atoi</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>s)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ae3e23f0c0cd22fcc076fea458d657d42" kindref="member">atoi</ref>(s.c_str());}</highlight></codeline>
-<codeline lineno="158" refid="expand_8_h_1a0d19215d158f5323e78e73113ac9e4fe" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a0d19215d158f5323e78e73113ac9e4fe" kindref="member">atol</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>s)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ae3e23f0c0cd22fcc076fea458d657d42" kindref="member">atoi</ref>(s.c_str())<sp/>?<sp/>true<sp/>:<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;}</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="161"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="162"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Component<sp/>structures</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="164"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_component_container_8_h" kindref="compound">ComponentContainer.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight><highlight class="comment">//<sp/>External<sp/>forces</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="169"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="171"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_external_force_8_h" kindref="compound">ExternalForce.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="172"><highlight class="normal"></highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Output<sp/>list</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="176"><highlight class="normal"></highlight></codeline>
-<codeline lineno="177"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_output_8_h" kindref="compound">Output.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="178"><highlight class="normal"></highlight></codeline>
-<codeline lineno="179" refid="expand_8_h_1a7e1b26ed04ad446033a4b441924dabdb" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a7e1b26ed04ad446033a4b441924dabdb" kindref="member">do_output_init</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"></highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="182"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Parameter<sp/>database</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="183"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="184"><highlight class="normal"></highlight></codeline>
-<codeline lineno="185"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;yaml-cpp/yaml.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="186"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_component_container_8_h" kindref="compound">ComponentContainer.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="187"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="global_8_h" kindref="compound">global.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="188"><highlight class="normal"></highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="190"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Handlers<sp/>defined<sp/>in<sp/>signal.cc</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193" refid="expand_8_h_1a8e6601c6deaf409bc963ba962eed414a" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a8e6601c6deaf409bc963ba962eed414a" kindref="member">set_fpu_invalid_handler</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"></highlight></codeline>
-<codeline lineno="195" refid="expand_8_h_1abbd5182c07d128216d8ebc2bcc04aa6d" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1abbd5182c07d128216d8ebc2bcc04aa6d" kindref="member">set_fpu_trace_handler</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="197" refid="expand_8_h_1a916518b78a91c9ed7cf106f81ce46961" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a916518b78a91c9ed7cf106f81ce46961" kindref="member">set_fpu_gdb_handler</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight></codeline>
-<codeline lineno="199" refid="expand_8_h_1ae11bac7b5e54518b79a87df99af6367c" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ae11bac7b5e54518b79a87df99af6367c" kindref="member">exp_mpi_error_handler</ref>(MPI_Comm<sp/>*communicator,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>*error_code,<sp/>...);</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
-<codeline lineno="201" refid="expand_8_h_1ad76934ce385c40e93212f9326b40309f" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ad76934ce385c40e93212f9326b40309f" kindref="member">signal_handler_stop</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sig);</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"></highlight></codeline>
-<codeline lineno="203" refid="expand_8_h_1a70eb70d04b5d62461301cc4ca8e86926" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a70eb70d04b5d62461301cc4ca8e86926" kindref="member">signal_handler_dump</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sig);</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Handlers<sp/>defined<sp/>in<sp/>exputil/stack.cc</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="207"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="208"><highlight class="normal"></highlight></codeline>
-<codeline lineno="209" refid="expand_8_h_1a5f7d0e4bf7d60319f281c36ed109216e" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a5f7d0e4bf7d60319f281c36ed109216e" kindref="member">print_trace</ref>(std::ostream&amp;<sp/>out,</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*<ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>line);</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"></highlight></codeline>
-<codeline lineno="212" refid="expand_8_h_1ae07814c54e259e76d65cb4f0056ce23c" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1ae07814c54e259e76d65cb4f0056ce23c" kindref="member">mpi_print_trace</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>routine,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>msg,</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*<ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>line);</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"></highlight></codeline>
-<codeline lineno="215" refid="expand_8_h_1abcc0f1f6c53b0ee8679b49e2ca87ddf5" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1abcc0f1f6c53b0ee8679b49e2ca87ddf5" kindref="member">mpi_gdb_print_trace</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sig);</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"></highlight></codeline>
-<codeline lineno="217" refid="expand_8_h_1a46e54dba3247f02231f3283d103f49ba" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a46e54dba3247f02231f3283d103f49ba" kindref="member">mpi_gdb_wait_trace</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sig);</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight></codeline>
-<codeline lineno="219"><highlight class="normal"></highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="221"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Exception<sp/>handler</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="222"><highlight class="normal"></highlight><highlight class="comment">//===========================================</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="223"><highlight class="normal"></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_e_x_p_exception_8_h" kindref="compound">EXPException.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="225"><highlight class="normal"></highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/expand.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/exponential_8_h.xml b/doxyxml/exponential_8_h.xml
deleted file mode 100644
index a70eb71..0000000
--- a/doxyxml/exponential_8_h.xml
+++ /dev/null
@@ -1,246 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="exponential_8_h" kind="file" language="C++">
-    <compoundname>exponential.H</compoundname>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <includedby refid="_disk2d_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</includedby>
-    <includedby refid="_disk_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</includedby>
-    <incdepgraph>
-      <node id="20">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/exponential.H</label>
-        <link refid="exponential_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="18">
-        <label>cstdlib</label>
-      </node>
-      <node id="8">
-        <label>deque</label>
-      </node>
-      <node id="13">
-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
-      </node>
-      <node id="15">
-        <label>iostream</label>
-      </node>
-      <node id="10">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="5">
-        <label>random</label>
-      </node>
-      <node id="17">
-        <label>sstream</label>
-      </node>
-      <node id="11">
-        <label>string</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/exponential.H</label>
-        <link refid="exponential_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</label>
-        <link refid="_disk2d_halo_8_h"/>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</label>
-        <link refid="_disk_halo_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_exponential_disk" prot="public">ExponentialDisk</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Exponential<sp/>disk</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_Expon_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Expon_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="class_exponential_disk" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_exponential_disk" kindref="compound">ExponentialDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="11"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="14" refid="class_exponential_disk_1a8d76e2b4c421753d2f30c0b1f5c2f110" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a8d76e2b4c421753d2f30c0b1f5c2f110" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="15" refid="class_exponential_disk_1a28973d85ac1f19b47adacb421b787463" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a28973d85ac1f19b47adacb421b787463" kindref="member">m</ref>;</highlight></codeline>
-<codeline lineno="16" refid="class_exponential_disk_1a6ca98db163b8ed33acb01f3c9c348563" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a6ca98db163b8ed33acb01f3c9c348563" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_exponential_disk_1a4ba43b0ae1b8146aae267dd64fe387d9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a4ba43b0ae1b8146aae267dd64fe387d9" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="18" refid="class_exponential_disk_1af73927e6a2b99ab772348a3b05c44425" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1af73927e6a2b99ab772348a3b05c44425" kindref="member">den0</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_exponential_disk_1a50278d030aef597c0ca802e5135a6a13" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_exponential_disk_1a50278d030aef597c0ca802e5135a6a13" kindref="member">ExponentialDisk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RSCALE=1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX=20.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DMASS=1.0)<sp/></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_exponential_disk_1a8d76e2b4c421753d2f30c0b1f5c2f110" kindref="member">a</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>RSCALE;<sp/></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_exponential_disk_1a6ca98db163b8ed33acb01f3c9c348563" kindref="member">rmin</ref><sp/><sp/><sp/><sp/>=<sp/>1.0e-8;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_exponential_disk_1a4ba43b0ae1b8146aae267dd64fe387d9" kindref="member">rmax</ref><sp/><sp/><sp/><sp/>=<sp/>RMAX;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_exponential_disk_1a28973d85ac1f19b47adacb421b787463" kindref="member">m</ref><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>DMASS;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_exponential_disk_1af73927e6a2b99ab772348a3b05c44425" kindref="member">den0</ref><sp/><sp/><sp/><sp/>=<sp/><ref refid="class_exponential_disk_1a28973d85ac1f19b47adacb421b787463" kindref="member">m</ref>*0.5/M_PI/<ref refid="class_exponential_disk_1a8d76e2b4c421753d2f30c0b1f5c2f110" kindref="member">a</ref>/<ref refid="class_exponential_disk_1a8d76e2b4c421753d2f30c0b1f5c2f110" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;ExponentialDisk&quot;</highlight><highlight class="normal">;<sp/></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_exponential_disk_1aab1bb2d22f8c4b8d5c2fb20b51989373" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1aab1bb2d22f8c4b8d5c2fb20b51989373" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a28973d85ac1f19b47adacb421b787463" kindref="member">m</ref>*(1.0<sp/>-<sp/>exp(-r/<ref refid="class_exponential_disk_1a8d76e2b4c421753d2f30c0b1f5c2f110" kindref="member">a</ref>)*(1.0+r/<ref refid="class_exponential_disk_1a8d76e2b4c421753d2f30c0b1f5c2f110" kindref="member">a</ref>));<sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_exponential_disk_1acdc1edb0d7993b793c1dd57d9bd3a189" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1acdc1edb0d7993b793c1dd57d9bd3a189" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1af73927e6a2b99ab772348a3b05c44425" kindref="member">den0</ref>*exp(-r/<ref refid="class_exponential_disk_1a8d76e2b4c421753d2f30c0b1f5c2f110" kindref="member">a</ref>);<sp/>}</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_exponential_disk_1ab44c3a14a2887e077acd3c57abece743" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1ab44c3a14a2887e077acd3c57abece743" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_exponential_disk_1af4049b4d62c5b47622aedec3ca2fed48" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1af4049b4d62c5b47622aedec3ca2fed48" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_exponential_disk_1a81c1a4ba41b67dc7742d5f62c8ac65cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a81c1a4ba41b67dc7742d5f62c8ac65cf" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_exponential_disk_1a28418ece1514b658f0130e1ec593881d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a28418ece1514b658f0130e1ec593881d" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur);</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_exponential_disk_1a2db4b79f560ce385e19079e903209ebc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a2db4b79f560ce385e19079e903209ebc" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a6ca98db163b8ed33acb01f3c9c348563" kindref="member">rmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="53" refid="class_exponential_disk_1a5215563cdffb2e8eb89c655ff1d6975b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a5215563cdffb2e8eb89c655ff1d6975b" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a4ba43b0ae1b8146aae267dd64fe387d9" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_exponential_disk_1af8a33f88f2d312a4d25b82f894cc30b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1af8a33f88f2d312a4d25b82f894cc30b6" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_exponential_disk_1ae6bb65bad474e5969737a48409a3dd39" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1ae6bb65bad474e5969737a48409a3dd39" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_exponential_disk_1a53953c3c52c784e06dabda45316797c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1a53953c3c52c784e06dabda45316797c2" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="70" refid="class_exponential_disk_1aa78c1fcb29ac9a51cabdbdc6c42d6887" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_exponential_disk_1aa78c1fcb29ac9a51cabdbdc6c42d6887" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Dist<sp/>fct<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/exponential.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/exputils_8_h.xml b/doxyxml/exputils_8_h.xml
deleted file mode 100644
index 2c8a284..0000000
--- a/doxyxml/exputils_8_h.xml
+++ /dev/null
@@ -1,90 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="exputils_8_h" kind="file" language="C++">
-    <compoundname>exputils.H</compoundname>
-    <includes local="no">string</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/exputils.H</label>
-        <link refid="exputils_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="2">
-        <label>string</label>
-      </node>
-    </incdepgraph>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="exputils_8_h_1a37b433809e32a3f1ca9c1752e94a7c07" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::tuple&lt; bool, double, std::vector&lt; double &gt; &gt;</type>
-        <definition>std::tuple&lt; bool, double, std::vector&lt; double &gt; &gt; orthoCompute</definition>
-        <argsstring>(const std::vector&lt; Eigen::MatrixXd &gt; &amp;tests)</argsstring>
-        <name>orthoCompute</name>
-        <param>
-          <type>const std::vector&lt; Eigen::MatrixXd &gt; &amp;</type>
-          <declname>tests</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/exputils.H" line="10" column="1" declfile="/home/weinberg/Projects/EXP/include/exputils.H" declline="10" declcolumn="1"/>
-      </memberdef>
-      <memberdef kind="function" id="exputils_8_h_1aa87990e534a511950e6182dbaa831ce1" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void orthoTest</definition>
-        <argsstring>(const std::vector&lt; Eigen::MatrixXd &gt; &amp;tests, const std::string &amp;classname, const std::string &amp;indexname)</argsstring>
-        <name>orthoTest</name>
-        <param>
-          <type>const std::vector&lt; Eigen::MatrixXd &gt; &amp;</type>
-          <declname>tests</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>classname</declname>
-        </param>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>indexname</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/exputils.H" line="12" column="6" declfile="/home/weinberg/Projects/EXP/include/exputils.H" declline="12" declcolumn="6"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>exputils<sp/>signatures</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_EXPUTILS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_EXPUTILS_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal">std::tuple&lt;bool,<sp/>double,<sp/>std::vector&lt;double&gt;&gt;</highlight></codeline>
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-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="13"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>classname,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>indexname);</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
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-  </compounddef>
-</doxygen>
diff --git a/doxyxml/external_shock_8_h.xml b/doxyxml/external_shock_8_h.xml
deleted file mode 100644
index 854f721..0000000
--- a/doxyxml/external_shock_8_h.xml
+++ /dev/null
@@ -1,186 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <compoundname>externalShock.H</compoundname>
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-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
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-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="3" relation="include">
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-        <childnode refid="4" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/externalShock.H</label>
-        <link refid="external_shock_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="10">
-        <label>cstdlib</label>
-      </node>
-      <node id="16">
-        <label>deque</label>
-      </node>
-      <node id="3">
-        <label>functional</label>
-      </node>
-      <node id="8">
-        <label>iomanip</label>
-      </node>
-      <node id="7">
-        <label>iostream</label>
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-      <node id="18">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
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-        <label>random</label>
-      </node>
-      <node id="9">
-        <label>sstream</label>
-      </node>
-      <node id="11">
-        <label>string</label>
-      </node>
-      <node id="12">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="classexternal_shock" prot="public">externalShock</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_externalShock_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_externalShock_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="orbit_8_h" kindref="compound">orbit.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8" refid="classexternal_shock" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classexternal_shock" kindref="compound">externalShock</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_external_force" kindref="compound">ExternalForce</ref></highlight></codeline>
-<codeline lineno="9"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13" refid="classexternal_shock_1a75faa9fbe26c97bd9375c5b8e3dcfbae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classexternal_shock_1a7830e0f39ea97e1a1e63323c3fe5ec83" kindref="member">E</ref>,<sp/><ref refid="classexternal_shock_1ad6b633ea80b75614401a7537a1108877" kindref="member">K</ref>,<sp/><ref refid="classexternal_shock_1aa610525676fef2f4b92a0e9b927f587a" kindref="member">PER</ref>,<sp/><ref refid="classexternal_shock_1a75faa9fbe26c97bd9375c5b8e3dcfbae" kindref="member">AMPL</ref>;</highlight></codeline>
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-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="classexternal_shock_1a70dbdb58334cf16cb4a34b3662896d2c" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SphericalModelTable&gt;<sp/><ref refid="classexternal_shock_1a70dbdb58334cf16cb4a34b3662896d2c" kindref="member">model</ref>;</highlight></codeline>
-<codeline lineno="17" refid="classexternal_shock_1ac5a009ebe10e383c2cdd6effba62820b" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;SphericalOrbit&gt;<sp/><ref refid="classexternal_shock_1ac5a009ebe10e383c2cdd6effba62820b" kindref="member">t</ref>;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="classexternal_shock_1aa78ed3c29c2759c2ac0a180c072c833e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classexternal_shock_1aa78ed3c29c2759c2ac0a180c072c833e" kindref="member">get_tidal_shock</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>T);</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="classexternal_shock_1a10d5542ceb79cfad75a206569db0a7f1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classexternal_shock_1a10d5542ceb79cfad75a206569db0a7f1" kindref="member">externalShock</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/><ref refid="class_pot_accel_1ab682d4480d7d2946a7bef7f93ac0c6a0" kindref="member">conf</ref>);</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-    </programlisting>
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-</doxygen>
diff --git a/doxyxml/foarray_8_h.xml b/doxyxml/foarray_8_h.xml
deleted file mode 100644
index 263b6e9..0000000
--- a/doxyxml/foarray_8_h.xml
+++ /dev/null
@@ -1,84 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="foarray_8_h" kind="file" language="C++">
-    <compoundname>foarray.H</compoundname>
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-    <innerclass refid="classfoarray" prot="public">foarray</innerclass>
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-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;algorithm&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">std;</highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Maintain<sp/>an<sp/>array<sp/>of<sp/>pointers<sp/>to<sp/>ofstreams</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="classfoarray" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classfoarray" kindref="compound">foarray</ref></highlight></codeline>
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-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="classfoarray_1a00dbe5bc427c0cc59cdf36cba11c839c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classfoarray_1a00dbe5bc427c0cc59cdf36cba11c839c" kindref="member">foarray</ref>(vector&lt;string&gt;&amp;<sp/>names,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>append=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
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-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(append)</highlight></codeline>
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-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!*<ref refid="classfoarray_1aee0297dd51e58572455503a9a6425fd4" kindref="member">fo</ref>[n])<sp/>{</highlight></codeline>
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-<codeline lineno="37"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="40"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/>n<sp/>=<sp/>min&lt;int&gt;(max&lt;int&gt;(n,<sp/>0),<sp/>n);</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*(<ref refid="classfoarray_1aee0297dd51e58572455503a9a6425fd4" kindref="member">fo</ref>[n]);<sp/></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="44"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/foarray.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/fpetrap_8h.xml b/doxyxml/fpetrap_8h.xml
deleted file mode 100644
index fc6c36c..0000000
--- a/doxyxml/fpetrap_8h.xml
+++ /dev/null
@@ -1,190 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="fpetrap_8h" kind="file" language="C++">
-    <compoundname>fpetrap.h</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">iomanip</includes>
-    <includes local="no">cfenv</includes>
-    <includes local="no">list</includes>
-    <includes local="no">signal.h</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/fpetrap.h</label>
-        <link refid="fpetrap_8h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
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-        <label>cfenv</label>
-      </node>
-      <node id="3">
-        <label>iomanip</label>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-      <node id="5">
-        <label>list</label>
-      </node>
-      <node id="6">
-        <label>signal.h</label>
-      </node>
-    </incdepgraph>
-    <sectiondef kind="var">
-      <memberdef kind="variable" id="fpetrap_8h_1a361ed6a787b7e40102cf6cb632bfaf3f" prot="public" static="yes" mutable="no">
-        <type>int</type>
-        <definition>int my_err</definition>
-        <argsstring></argsstring>
-        <name>my_err</name>
-        <briefdescription>
-<para>Global to hold error code. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Some FPE trapping stuff for debugging </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/fpetrap.h" line="19" column="12" bodyfile="/home/weinberg/Projects/EXP/include/fpetrap.h" bodystart="19" bodyend="-1"/>
-        <referencedby refid="fpetrap_8h_1a2226e0dd8dd57eefc21a83b6462022a7" compoundref="fpetrap_8h" startline="22" endline="26">my_fpu_handler</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="fpetrap_8h_1a942b8fb4c34353a6183d3bd574ba768f" prot="public" static="yes" mutable="no">
-        <type>void(*</type>
-        <definition>void(* oldhandler) (int)</definition>
-        <argsstring>)(int)</argsstring>
-        <name>oldhandler</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/fpetrap.h" line="28" column="8" bodyfile="/home/weinberg/Projects/EXP/include/fpetrap.h" bodystart="28" bodyend="-1"/>
-        <referencedby refid="fpetrap_8h_1a76440b3b5a08d9d65df560ed501d1f4d" compoundref="fpetrap_8h" startline="35" endline="73">set_fpu_handler</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="fpetrap_8h_1a2226e0dd8dd57eefc21a83b6462022a7" prot="public" static="yes" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>static void my_fpu_handler</definition>
-        <argsstring>(int err)</argsstring>
-        <name>my_fpu_handler</name>
-        <param>
-          <type>int</type>
-          <declname>err</declname>
-        </param>
-        <briefdescription>
-<para>Very lean error handler. Only good for setting a debugger breakpoint. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/fpetrap.h" line="22" column="13" bodyfile="/home/weinberg/Projects/EXP/include/fpetrap.h" bodystart="22" bodyend="26"/>
-        <references refid="fpetrap_8h_1a361ed6a787b7e40102cf6cb632bfaf3f" compoundref="fpetrap_8h" startline="19">my_err</references>
-        <referencedby refid="fpetrap_8h_1a76440b3b5a08d9d65df560ed501d1f4d" compoundref="fpetrap_8h" startline="35" endline="73">set_fpu_handler</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="fpetrap_8h_1a76440b3b5a08d9d65df560ed501d1f4d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void set_fpu_handler</definition>
-        <argsstring>(void)</argsstring>
-        <name>set_fpu_handler</name>
-        <param>
-          <type>void</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Turns on exceptions for invalid, div by zero and overflow, other <linebreak/>
- bits default. This will only work for x86 architecture. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/fpetrap.h" line="35" column="6" bodyfile="/home/weinberg/Projects/EXP/include/fpetrap.h" bodystart="35" bodyend="73"/>
-        <references refid="fpetrap_8h_1a2226e0dd8dd57eefc21a83b6462022a7" compoundref="fpetrap_8h" startline="22" endline="26">my_fpu_handler</references>
-        <references refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" compoundref="localmpi_8_h" startline="17">myid</references>
-        <references refid="fpetrap_8h_1a942b8fb4c34353a6183d3bd574ba768f" compoundref="fpetrap_8h" startline="28">oldhandler</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>FPE_TRAP_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>FPE_TRAP_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cfenv&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;list&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;signal.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>HAVE_FPU_CONTROL_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fpu_control.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="fpetrap_8h_1a361ed6a787b7e40102cf6cb632bfaf3f" refkind="member"><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="fpetrap_8h_1a361ed6a787b7e40102cf6cb632bfaf3f" kindref="member">my_err</ref>;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="fpetrap_8h_1a2226e0dd8dd57eefc21a83b6462022a7" refkind="member"><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="fpetrap_8h_1a2226e0dd8dd57eefc21a83b6462022a7" kindref="member">my_fpu_handler</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>err)</highlight></codeline>
-<codeline lineno="23"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><ref refid="fpetrap_8h_1a361ed6a787b7e40102cf6cb632bfaf3f" kindref="member">my_err</ref><sp/>=<sp/>err;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;FP<sp/>trapped<sp/>error=&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="fpetrap_8h_1a361ed6a787b7e40102cf6cb632bfaf3f" kindref="member">my_err</ref><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="fpetrap_8h_1a942b8fb4c34353a6183d3bd574ba768f" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>void<sp/>(*<ref refid="fpetrap_8h_1a942b8fb4c34353a6183d3bd574ba768f" kindref="member">oldhandler</ref>)(int);<sp/></highlight><highlight class="comment">//<sp/>keep<sp/>a<sp/>reference<sp/>to<sp/>the<sp/>initial<sp/>value</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>so<sp/>it<sp/>can<sp/>be<sp/>restored<sp/>later</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="fpetrap_8h_1a76440b3b5a08d9d65df560ed501d1f4d" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="fpetrap_8h_1a76440b3b5a08d9d65df560ed501d1f4d" kindref="member">set_fpu_handler</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="36"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>HAVE_FPU_CONTROL_H<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Set<sp/>control<sp/>flag<sp/>(see<sp/>fpu_control.h)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">short</highlight><highlight class="normal"><sp/>cw<sp/>=<sp/>0x0372;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/>_FPU_SETCW(cw);</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><ref refid="fpetrap_8h_1a942b8fb4c34353a6183d3bd574ba768f" kindref="member">oldhandler</ref><sp/>=<sp/>signal(SIGFPE,<sp/><ref refid="fpetrap_8h_1a2226e0dd8dd57eefc21a83b6462022a7" kindref="member">my_fpu_handler</ref>);</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(SIG_ERR<sp/>==<sp/><ref refid="fpetrap_8h_1a942b8fb4c34353a6183d3bd574ba768f" kindref="member">oldhandler</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;EXP:<sp/>Cannot<sp/>install<sp/>floating-point<sp/>exception<sp/>handler&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/>exit(-1);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;EXP:<sp/>Floating<sp/>point-exception<sp/>handler<sp/>installed&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>HAVE_FPU_CONTROL_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/>feenableexcept(FE_ALL_EXCEPT<sp/>&amp;<sp/>~FE_INEXACT);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Print<sp/>enabled<sp/>flags<sp/>to<sp/>root<sp/>node</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)<sp/>{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::list&lt;std::pair&lt;int,<sp/>std::string&gt;&gt;<sp/>flags<sp/>=</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>{<sp/>{FE_DIVBYZERO,<sp/></highlight><highlight class="stringliteral">&quot;divide-by-zero&quot;</highlight><highlight class="normal">},</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{FE_INEXACT,<sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;inexact&quot;</highlight><highlight class="normal">},</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{FE_INVALID,<sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;invalid&quot;</highlight><highlight class="normal">},</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{FE_OVERFLOW,<sp/><sp/></highlight><highlight class="stringliteral">&quot;overflow&quot;</highlight><highlight class="normal">},</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{FE_UNDERFLOW,<sp/></highlight><highlight class="stringliteral">&quot;underflow&quot;</highlight><highlight class="normal">}<sp/>};</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>_flags<sp/>=<sp/>fegetexcept();</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;----<sp/>Enabled<sp/>FE<sp/>flags:<sp/>&lt;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>v<sp/>:<sp/>flags)<sp/>{</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(v.first<sp/>&amp;<sp/>_flags)<sp/>std::cout<sp/>&lt;&lt;<sp/>v.second<sp/>&lt;&lt;<sp/></highlight><highlight class="charliteral">&apos;<sp/>&apos;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;\b&gt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="73"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/fpetrap.h"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/gadget_8_h.xml b/doxyxml/gadget_8_h.xml
deleted file mode 100644
index 7676a1f..0000000
--- a/doxyxml/gadget_8_h.xml
+++ /dev/null
@@ -1,68 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="gadget_8_h" kind="file" language="C++">
-    <compoundname>gadget.H</compoundname>
-    <includedby refid="_particle_reader_8_h" local="no">/home/weinberg/Projects/EXP/include/ParticleReader.H</includedby>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/ParticleReader.H</label>
-        <link refid="_particle_reader_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/gadget.H</label>
-        <link refid="gadget_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="structgadget__header" prot="public">gadget_header</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_gadget_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_gadget_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4" refid="structgadget__header" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="structgadget__header" kindref="compound">gadget_header</ref></highlight></codeline>
-<codeline lineno="5"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="7" refid="structgadget__header_1a882f8673fa4f20ebd20ee47e6e04a0dc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="structgadget__header_1a882f8673fa4f20ebd20ee47e6e04a0dc" kindref="member">npart</ref>[6];<sp/><sp/></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
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deleted file mode 100644
index 5429598..0000000
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/EllipsoidForce.H</label>
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/SphericalSL.H</label>
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H</label>
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-        <label>/home/weinberg/Projects/EXP/utils/PhaseSpace/MakeModel.H</label>
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-    </invincdepgraph>
-    <innerclass refid="class_gauss_quad" prot="public">GaussQuad</innerclass>
-    <innerclass refid="class_herm_quad" prot="public">HermQuad</innerclass>
-    <innerclass refid="class_jaco_quad" prot="public">JacoQuad</innerclass>
-    <innerclass refid="class_lagu_quad" prot="public">LaguQuad</innerclass>
-    <innerclass refid="class_lege_quad" prot="public">LegeQuad</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">/*</highlight></codeline>
-<codeline lineno="2"><highlight class="comment"></highlight></codeline>
-<codeline lineno="3"><highlight class="comment">SYNOPSIS</highlight></codeline>
-<codeline lineno="4"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>#include<sp/>&lt;gaussQ.H&gt;</highlight></codeline>
-<codeline lineno="5"><highlight class="comment"></highlight></codeline>
-<codeline lineno="6"><highlight class="comment"></highlight></codeline>
-<codeline lineno="7"><highlight class="comment">DESCRIPTION</highlight></codeline>
-<codeline lineno="8"><highlight class="comment"></highlight></codeline>
-<codeline lineno="9"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>The<sp/>functions<sp/>compute<sp/>the<sp/>abscissas<sp/>and<sp/><sp/>weight<sp/><sp/>factors<sp/><sp/>of</highlight></codeline>
-<codeline lineno="10"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>various<sp/><sp/><sp/>Gaussian<sp/><sp/><sp/>quadrature<sp/><sp/><sp/>formulas.</highlight></codeline>
-<codeline lineno="11"><highlight class="comment"></highlight></codeline>
-<codeline lineno="12"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>For<sp/>the<sp/>&quot;Jacobi&quot;<sp/>series,<sp/>the<sp/>weight<sp/>function<sp/>is</highlight></codeline>
-<codeline lineno="13"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>w(x)<sp/>=<sp/>x**alpha<sp/>*<sp/>(1-x)**beta</highlight></codeline>
-<codeline lineno="14"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>over<sp/>the<sp/>interval<sp/>0<sp/>&lt;=<sp/>x<sp/>&lt;=<sp/>1,<sp/>with<sp/>alpha,<sp/>beta<sp/>&gt;<sp/>-1.</highlight></codeline>
-<codeline lineno="15"><highlight class="comment"></highlight></codeline>
-<codeline lineno="16"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>For<sp/>the<sp/>&quot;Legendre&quot;<sp/>series,<sp/>the<sp/>weight<sp/>function<sp/>is</highlight></codeline>
-<codeline lineno="17"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>w(x)<sp/>=<sp/>1</highlight></codeline>
-<codeline lineno="18"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>over<sp/>the<sp/>interval<sp/>0<sp/>&lt;=<sp/>x<sp/>&lt;=<sp/>1</highlight></codeline>
-<codeline lineno="19"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>(This<sp/>is<sp/>computed<sp/>as<sp/>a<sp/>special<sp/>case<sp/>of<sp/>the<sp/>Jacobi<sp/>series)</highlight></codeline>
-<codeline lineno="20"><highlight class="comment"></highlight></codeline>
-<codeline lineno="21"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>For<sp/>the<sp/>&quot;Laguerre&quot;<sp/>series,<sp/>the<sp/>weight<sp/>function<sp/>is</highlight></codeline>
-<codeline lineno="22"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>w(x)<sp/>=<sp/>x**alpha<sp/>*<sp/>exp(-x)</highlight></codeline>
-<codeline lineno="23"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>over<sp/>the<sp/>interval<sp/>0<sp/>&lt;=<sp/>x<sp/>&lt;<sp/>+infinity,<sp/>with<sp/>alpha<sp/>&gt;<sp/>-1.</highlight></codeline>
-<codeline lineno="24"><highlight class="comment"></highlight></codeline>
-<codeline lineno="25"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>For<sp/>the<sp/>&quot;Hermite&quot;<sp/>series,<sp/>the<sp/>weight<sp/>function<sp/>is</highlight></codeline>
-<codeline lineno="26"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>w(x)<sp/>=<sp/>abs(x)**alpha<sp/>*<sp/>exp(-x**2)</highlight></codeline>
-<codeline lineno="27"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>over<sp/>the<sp/>interval<sp/>-infinity<sp/>&lt;<sp/>x<sp/>&lt;<sp/>+infinity,</highlight></codeline>
-<codeline lineno="28"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>with<sp/>alpha<sp/>&gt;<sp/>-1.</highlight></codeline>
-<codeline lineno="29"><highlight class="comment"></highlight></codeline>
-<codeline lineno="30"><highlight class="comment">DIAGNOSTICS</highlight></codeline>
-<codeline lineno="31"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>Aborts<sp/>with<sp/>error<sp/>message<sp/>on<sp/>creation<sp/>if<sp/>alpha<sp/>or<sp/>beta<sp/>&lt;=<sp/>-1.</highlight></codeline>
-<codeline lineno="32"><highlight class="comment"></highlight></codeline>
-<codeline lineno="33"><highlight class="comment">HISTORY</highlight></codeline>
-<codeline lineno="34"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>22-Sep-85<sp/><sp/>asselin<sp/>at<sp/>Carnegie-Mellon<sp/>University</highlight></codeline>
-<codeline lineno="35"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Created.<sp/>(C-code)</highlight></codeline>
-<codeline lineno="36"><highlight class="comment"></highlight></codeline>
-<codeline lineno="37"><highlight class="comment"><sp/><sp/><sp/><sp/><sp/>01/18/94<sp/>C++<sp/>wrapper<sp/>MDW</highlight></codeline>
-<codeline lineno="38"><highlight class="comment"></highlight></codeline>
-<codeline lineno="39"><highlight class="comment">*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_gaussQ_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_gaussQ_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">std;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iomanip&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;sstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cstdlib&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_gauss_quad" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_gauss_quad" kindref="compound">GaussQuad</ref><sp/></highlight></codeline>
-<codeline lineno="54"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57" refid="class_gauss_quad_1ad1428170032a5c603f2e27044dc0817e" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_gauss_quad_1ad1428170032a5c603f2e27044dc0817e" kindref="member">FunctionID</ref>;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_gauss_quad_1ae694260fcd21e6c830823fd780a782be" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_gauss_quad_1ae694260fcd21e6c830823fd780a782be" kindref="member">w</ref>;</highlight></codeline>
-<codeline lineno="60" refid="class_gauss_quad_1a741719a378924dc7c11b9debb4e9b225" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_gauss_quad_1a741719a378924dc7c11b9debb4e9b225" kindref="member">r</ref>;</highlight></codeline>
-<codeline lineno="61" refid="class_gauss_quad_1a9c69bf4fa86abd41689d3dcffa4a5851" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a9c69bf4fa86abd41689d3dcffa4a5851" kindref="member">alpha</ref>;</highlight></codeline>
-<codeline lineno="62" refid="class_gauss_quad_1a5e3f4ea3271cac850f964c12fd6d6eee" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a5e3f4ea3271cac850f964c12fd6d6eee" kindref="member">beta</ref>;</highlight></codeline>
-<codeline lineno="63" refid="class_gauss_quad_1af6bcda50fcfae1b73a9e1e2dfa3c83cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1af6bcda50fcfae1b73a9e1e2dfa3c83cf" kindref="member">n</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_gauss_quad_1a2d164fe57b165dcd45a3f9ad4b102903" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_gauss_quad_1a2d164fe57b165dcd45a3f9ad4b102903" kindref="member">GaussQuad</ref>()<sp/>:<sp/><ref refid="class_gauss_quad_1a9c69bf4fa86abd41689d3dcffa4a5851" kindref="member">alpha</ref>(0),<sp/><ref refid="class_gauss_quad_1a5e3f4ea3271cac850f964c12fd6d6eee" kindref="member">beta</ref>(0),<sp/><ref refid="class_gauss_quad_1af6bcda50fcfae1b73a9e1e2dfa3c83cf" kindref="member">n</ref>(0)<sp/>{}</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_gauss_quad_1a5cac0f24ea4719573bf3913c7bef6490" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a5cac0f24ea4719573bf3913c7bef6490" kindref="member">weight</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;0<sp/>||<sp/>i&gt;=<ref refid="class_gauss_quad_1af6bcda50fcfae1b73a9e1e2dfa3c83cf" kindref="member">n</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1aec3155c26b5792115c894a8288185fa5" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;index<sp/>out<sp/>of<sp/>bounds&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1ae694260fcd21e6c830823fd780a782be" kindref="member">w</ref>[i];<sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_gauss_quad_1a30ed9e0400fddda528ad20b71fb040aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a30ed9e0400fddda528ad20b71fb040aa" kindref="member">knot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;0<sp/>||<sp/>i&gt;=<ref refid="class_gauss_quad_1af6bcda50fcfae1b73a9e1e2dfa3c83cf" kindref="member">n</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1aec3155c26b5792115c894a8288185fa5" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;index<sp/>out<sp/>of<sp/>bounds&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a741719a378924dc7c11b9debb4e9b225" kindref="member">r</ref>[i];<sp/>}</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73" refid="class_gauss_quad_1a788426d5845819287474b161975389a0" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;&amp;<sp/><ref refid="class_gauss_quad_1a788426d5845819287474b161975389a0" kindref="member">wV</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1ae694260fcd21e6c830823fd780a782be" kindref="member">w</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="74" refid="class_gauss_quad_1ab5ce159e90af9f0912424e4351844882" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;&amp;<sp/><ref refid="class_gauss_quad_1ab5ce159e90af9f0912424e4351844882" kindref="member">kV</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a741719a378924dc7c11b9debb4e9b225" kindref="member">r</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="75" refid="class_gauss_quad_1a4522920cf5303e3d0040b626b6ada8a6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a4522920cf5303e3d0040b626b6ada8a6" kindref="member">get_n</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1af6bcda50fcfae1b73a9e1e2dfa3c83cf" kindref="member">n</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="76" refid="class_gauss_quad_1ad0ff3faadab8afbd0ff35111a02938dc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1ad0ff3faadab8afbd0ff35111a02938dc" kindref="member">get_alpha</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a9c69bf4fa86abd41689d3dcffa4a5851" kindref="member">alpha</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="77" refid="class_gauss_quad_1a647dda30c76a016d266d6ccc83ae79a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a647dda30c76a016d266d6ccc83ae79a7" kindref="member">get_beta</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1a5e3f4ea3271cac850f964c12fd6d6eee" kindref="member">beta</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79" refid="class_gauss_quad_1aec3155c26b5792115c894a8288185fa5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad_1aec3155c26b5792115c894a8288185fa5" kindref="member">bomb</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*s)<sp/>{</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;ERROR<sp/>from<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_gauss_quad_1ad1428170032a5c603f2e27044dc0817e" kindref="member">FunctionID</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>s;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="84"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_herm_quad" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_herm_quad" kindref="compound">HermQuad</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad" kindref="compound">GaussQuad</ref></highlight></codeline>
-<codeline lineno="87"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="89" refid="class_herm_quad_1a57421fe7c96898260f3b384843797cd6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_herm_quad_1a57421fe7c96898260f3b384843797cd6" kindref="member">HermQuad</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N=10,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ALPHA=0.0);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_lagu_quad" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_lagu_quad" kindref="compound">LaguQuad</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad" kindref="compound">GaussQuad</ref></highlight></codeline>
-<codeline lineno="93"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="95" refid="class_lagu_quad_1aa121cf9a2780d51efc18dc64949c3f5a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_lagu_quad_1aa121cf9a2780d51efc18dc64949c3f5a" kindref="member">LaguQuad</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N=10,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ALPHA=0.0);</highlight></codeline>
-<codeline lineno="96"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_jaco_quad" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_jaco_quad" kindref="compound">JacoQuad</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_gauss_quad" kindref="compound">GaussQuad</ref></highlight></codeline>
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deleted file mode 100644
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deleted file mode 100644
index 76ce7ca..0000000
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-        <argsstring></argsstring>
-        <name>restart_cmd</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Restart command on successful completion but early termination according to the checkpoint timer </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="293" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="293" declcolumn="15"/>
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-        <type>int</type>
-        <definition>int rlimit_val</definition>
-        <argsstring></argsstring>
-        <name>rlimit_val</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Default memory limit value in GB. If value is set to zero, use the system default. If value is less than zero, attempt to set memory to unlimited. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="322" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="322" declcolumn="13"/>
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-        <type>double</type>
-        <definition>double runtime</definition>
-        <argsstring></argsstring>
-        <name>runtime</name>
-        <briefdescription>
-<para>Total alloted runtime (runtime &lt; 0 turns off timer) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <type>bool</type>
-        <definition>bool use_cuda</definition>
-        <argsstring></argsstring>
-        <name>use_cuda</name>
-        <briefdescription>
-<para>Set to false to suppress cuda computation. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="329" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="329" declcolumn="13"/>
-        <referencedby refid="class_component_1a118ca15a00fb10267b9e784a1912ab15" compoundref="_component_8_h" startline="590" endline="597">Component::fix_positions</referencedby>
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-        <type>bool</type>
-        <definition>bool all_couples</definition>
-        <argsstring></argsstring>
-        <name>all_couples</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Toggle interactions &quot;on&quot; or &quot;off&quot; by default. If interactions are &quot;on&quot; (the default), interactions listed in the &apos;<ref refid="class_interaction" kindref="compound">Interaction</ref>&apos; list be turned &quot;off&quot;. Alternatively, if interactions are &quot;off&quot;, interactions listed in the &apos;<ref refid="class_interaction" kindref="compound">Interaction</ref>&apos; list be turned &quot;on&quot;. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="211" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="211" declcolumn="13"/>
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-        <type>int</type>
-        <definition>int centerlevl</definition>
-        <argsstring></argsstring>
-        <name>centerlevl</name>
-        <briefdescription>
-<para>Lowest level for centering recomputation (default: multistep/2) </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="92" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="92" declcolumn="12"/>
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-        <type>double</type>
-        <definition>double dbthresh</definition>
-        <argsstring></argsstring>
-        <name>dbthresh</name>
-        <briefdescription>
-<para>Load balancing threshold (larger difference initiates balancing) </para>
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-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="62" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="62" declcolumn="15"/>
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-        <definition>vector&lt; vector&lt;int&gt; &gt; dstepL</definition>
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-        <name>dstepL</name>
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-<para>Multistep interpolation array. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="178" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="178" declcolumn="15"/>
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-        <definition>vector&lt; vector&lt;int&gt; &gt; dstepN</definition>
-        <argsstring></argsstring>
-        <name>dstepN</name>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="178" column="22" bodyfile="/home/weinberg/Projects/EXP/src/global.H" bodystart="178" bodyend="-1"/>
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-        <type>double</type>
-        <definition>double dtime</definition>
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-        <name>dtime</name>
-        <briefdescription>
-<para><ref refid="class_time" kindref="compound">Time</ref> step. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="68" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="68" declcolumn="15"/>
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-        <type>unsigned char</type>
-        <definition>unsigned char dump_signal</definition>
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-        <name>dump_signal</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para><ref refid="class_phase" kindref="compound">Phase</ref> space dump on next step</para>
-<para>This flag is set by signalling the root process with SIGHUP </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="218" column="22" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="218" declcolumn="22"/>
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-        <type>int</type>
-        <definition>int dump_signal0</definition>
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-        <name>dump_signal0</name>
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-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="236" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="236" declcolumn="12"/>
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-        <type>double</type>
-        <definition>double dynfracA</definition>
-        <argsstring></argsstring>
-        <name>dynfracA</name>
-        <briefdescription>
-<para>Acceleration coefficient (default: 0.03) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="107" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="107" declcolumn="15"/>
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-        <type>double</type>
-        <definition>double dynfracD</definition>
-        <argsstring></argsstring>
-        <name>dynfracD</name>
-        <briefdescription>
-<para>Drift coefficient (default: 1000.0) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="101" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="101" declcolumn="15"/>
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-        <type>double</type>
-        <definition>double dynfracP</definition>
-        <argsstring></argsstring>
-        <name>dynfracP</name>
-        <briefdescription>
-<para>Escape time scale coefficient (default: 0.05) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="110" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="110" declcolumn="15"/>
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-        <type>double</type>
-        <definition>double dynfracS</definition>
-        <argsstring></argsstring>
-        <name>dynfracS</name>
-        <briefdescription>
-<para>Fraction of dynamical time for determining multistep level. </para>
-        </briefdescription>
-        <detaileddescription>
-<para>Scale coefficient (default: 1.00) </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="98" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="98" declcolumn="15"/>
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-        <type>double</type>
-        <definition>double dynfracV</definition>
-        <argsstring></argsstring>
-        <name>dynfracV</name>
-        <briefdescription>
-<para>Velocity coefficient (default: 0.01) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="104" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="104" declcolumn="15"/>
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-        <type>bool</type>
-        <definition>bool eqmotion</definition>
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-        <name>eqmotion</name>
-        <briefdescription>
-<para>Toggle phase space advance (e.g. for use with externally supplied mapping). On by default. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="86" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="86" declcolumn="13"/>
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-        <definition>bool fpe_trace</definition>
-        <argsstring></argsstring>
-        <name>fpe_trace</name>
-        <briefdescription>
-<para>Install error handler for fpe backtrace. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="38" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="38" declcolumn="13"/>
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-        <name>fpe_trap</name>
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-<para>Install error handler for fpe debugging. </para>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="35" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="35" declcolumn="13"/>
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-<para>Install error handler for fpe wait. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="44" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="44" declcolumn="13"/>
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-        <type>double *</type>
-        <definition>double* gcom</definition>
-        <argsstring></argsstring>
-        <name>gcom</name>
-        <briefdescription>
-<para>Global center of mass. </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="145" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="145" declcolumn="15"/>
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-        <type>double *</type>
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-        <argsstring></argsstring>
-        <name>gcov</name>
-        <briefdescription>
-<para>Global center of velocity. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="148" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="148" declcolumn="15"/>
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-<para>Use gdb or native trace handling. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="41" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="41" declcolumn="13"/>
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-        <briefdescription>
-<para>Resets total center of velocity to zero if true. </para>
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-        <inbodydescription>
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-        <name>homedir</name>
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-<para>Home directory for configuration files, etc. </para>
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-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="71" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="71" declcolumn="15"/>
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-<para>Suppress parsing of info fields on restart; use config specified parameters instead </para>
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-        <name>infile</name>
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-<para>Input file (for restart) </para>
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-        <detaileddescription>
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-        <inbodydescription>
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-<para>True when initializing before first time step. </para>
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-<para>Used to flag separate behavior on inintialization (unused) </para>
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-        <definition>string ldlibdir</definition>
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-<para>Directory to look for loadable modules. </para>
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-        <name>mactive</name>
-        <briefdescription>
-<para>Multistep level flag: levels currently synchronized. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="181" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="181" declcolumn="15"/>
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-      <memberdef kind="variable" id="global_8_h_1a39fdaf6a894c8175a85b4c1025ce5b7d" prot="public" static="no" extern="yes" mutable="no">
-        <type>double</type>
-        <definition>double max_mindt</definition>
-        <argsstring></argsstring>
-        <name>max_mindt</name>
-        <briefdescription>
-<para>Maximum fraction of particles that request a smaller than minimum timestep. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="139" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="139" declcolumn="15"/>
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-      <memberdef kind="variable" id="global_8_h_1a36f3515c1de63a585ba000988c4e9e5e" prot="public" static="no" extern="yes" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned maxlev</definition>
-        <argsstring></argsstring>
-        <name>maxlev</name>
-        <briefdescription>
-<para>Multistep sublevel info used for nbody. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="163" column="17" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="163" declcolumn="17"/>
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-      <memberdef kind="variable" id="global_8_h_1ace19188521d679179f62686801a17451" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int mdrft</definition>
-        <argsstring></argsstring>
-        <name>mdrft</name>
-        <briefdescription>
-<para>Current point in multistepping for drift step. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="160" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="160" declcolumn="12"/>
-        <referencedby refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" compoundref="_cylinder_8_h" startline="417" endline="430">Cylinder::multistep_update_begin</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="global_8_h_1ae68076dadfc8e0ee051559218f8a16aa" prot="public" static="no" extern="yes" mutable="no">
-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; mfirst</definition>
-        <argsstring></argsstring>
-        <name>mfirst</name>
-        <briefdescription>
-<para>Lowest synchronized level at a step. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="175" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="175" declcolumn="15"/>
-        <referencedby refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" compoundref="_cyl_two_d_8_h" startline="159" endline="167">Cylinder::compute_multistep_coefficients</referencedby>
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-        <type>vector&lt; int &gt;</type>
-        <definition>vector&lt;int&gt; mintvl</definition>
-        <argsstring></argsstring>
-        <name>mintvl</name>
-        <briefdescription>
-<para>Multistep time step spacing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="172" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="172" declcolumn="15"/>
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-      <memberdef kind="variable" id="global_8_h_1aed81e434ac70ad715ebc7559c1e1e2cd" prot="public" static="no" extern="yes" mutable="no">
-        <type>MPI_Comm</type>
-        <definition>MPI_Comm MPI_COMM_WORKER</definition>
-        <argsstring></argsstring>
-        <name>MPI_COMM_WORKER</name>
-        <briefdescription>
-<para>Internally defined worker communicator. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="244" column="17" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="244" declcolumn="17"/>
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-      <memberdef kind="variable" id="global_8_h_1a35d8907068919380de34d0135d74bee5" prot="public" static="no" extern="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool mpi_wait</definition>
-        <argsstring></argsstring>
-        <name>mpi_wait</name>
-        <briefdescription>
-<para>Install error handler for MPI debugging. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="32" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="32" declcolumn="13"/>
-      </memberdef>
-      <memberdef kind="variable" id="global_8_h_1a88502f2706794e5f58c96bfa9a6287d0" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int mstep</definition>
-        <argsstring></argsstring>
-        <name>mstep</name>
-        <briefdescription>
-<para>Current point in multistepping for velocity step. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="166" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="166" declcolumn="12"/>
-        <referencedby refid="class_cylinder_1a8fe6465fcda2c9d81b9986fb30db316a" compoundref="_cyl_two_d_8_h" startline="159" endline="167">Cylinder::compute_multistep_coefficients</referencedby>
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-      <memberdef kind="variable" id="global_8_h_1a9d38ce195bc9586a796e874856b439e2" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int Mstep</definition>
-        <argsstring></argsstring>
-        <name>Mstep</name>
-        <briefdescription>
-<para>Maximum number of multistep steps. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="169" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="169" declcolumn="12"/>
-      </memberdef>
-      <memberdef kind="variable" id="global_8_h_1af91f8a0b7884c44b57e098c735affded" prot="public" static="no" extern="yes" mutable="no">
-        <type>double</type>
-        <definition>double mtot</definition>
-        <argsstring></argsstring>
-        <name>mtot</name>
-        <briefdescription>
-<para>Total mass in simulation (used by <ref refid="class_orient" kindref="compound">Orient</ref> and log diagnostics) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="142" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="142" declcolumn="15"/>
-      </memberdef>
-      <memberdef kind="variable" id="global_8_h_1aa942c9c85282e2ef97e4ad7e8bfa29bd" prot="public" static="no" extern="yes" mutable="no">
-        <type>std::map&lt; std::string, std::vector&lt; int &gt; &gt;</type>
-        <definition>std::map&lt;std::string, std::vector&lt;int&gt; &gt; nameMap</definition>
-        <argsstring></argsstring>
-        <name>nameMap</name>
-        <briefdescription>
-<para>List of host names and ranks. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="247" column="17" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="247" declcolumn="17"/>
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-      <memberdef kind="variable" id="global_8_h_1a01da99b04f54c47634bc4254db18b4a8" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int nbalance</definition>
-        <argsstring></argsstring>
-        <name>nbalance</name>
-        <briefdescription>
-<para>Number of steps between load balancing (use 0 for none) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="59" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="59" declcolumn="12"/>
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-        <type>int</type>
-        <definition>int ngpus</definition>
-        <argsstring></argsstring>
-        <name>ngpus</name>
-        <briefdescription>
-<para>Number of gpu devices per node. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="53" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="53" declcolumn="12"/>
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-        <type>int</type>
-        <definition>int NICE</definition>
-        <argsstring></argsstring>
-        <name>NICE</name>
-        <briefdescription>
-<para>Process priority set to NICE value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="124" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="124" declcolumn="12"/>
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-      <memberdef kind="variable" id="global_8_h_1ad3107242422650d1716f98acaa3c16ae" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int nreport</definition>
-        <argsstring></argsstring>
-        <name>nreport</name>
-        <briefdescription>
-<para>Number of steps between particle number reports (use 0 for none) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="56" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="56" declcolumn="12"/>
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-      <memberdef kind="variable" id="global_8_h_1aa2414080b021dbb9b56eeaeedec0ffa2" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int nsteps</definition>
-        <argsstring></argsstring>
-        <name>nsteps</name>
-        <briefdescription>
-<para>Maximum number of steps to execute. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="50" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="50" declcolumn="12"/>
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-      <memberdef kind="variable" id="global_8_h_1a49d4ae0e359da5d25a267486acdbd008" prot="public" static="no" extern="yes" mutable="no">
-        <type>string</type>
-        <definition>string parmfile</definition>
-        <argsstring></argsstring>
-        <name>parmfile</name>
-        <briefdescription>
-<para>Parameter dump file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="80" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="80" declcolumn="15"/>
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-      <memberdef kind="variable" id="global_8_h_1a1545b24fd58381f1043ed453da966811" prot="public" static="no" extern="yes" mutable="no">
-        <type>unsigned</type>
-        <definition>unsigned PFbufsz</definition>
-        <argsstring></argsstring>
-        <name>PFbufsz</name>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> ferry buffer size. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="65" column="17" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="65" declcolumn="17"/>
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-      <memberdef kind="variable" id="global_8_h_1a4ed092beb16afee59d5d3027ff7815e3" prot="public" static="no" extern="yes" mutable="no">
-        <type>vector&lt; <ref refid="structthrd__pass__posvel" kindref="compound">thrd_pass_posvel</ref> &gt;</type>
-        <definition>vector&lt;thrd_pass_posvel&gt; posvel_data</definition>
-        <argsstring></argsstring>
-        <name>posvel_data</name>
-        <briefdescription>
-<para>Multithreding data structures for incr_position and incr_velocity. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="198" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="198" declcolumn="15"/>
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-      <memberdef kind="variable" id="global_8_h_1a8edc685f083ec1e94f0f795d0b1cf6f6" prot="public" static="no" extern="yes" mutable="no">
-        <type>vector&lt; pthread_t &gt;</type>
-        <definition>vector&lt;pthread_t&gt; posvel_thrd</definition>
-        <argsstring></argsstring>
-        <name>posvel_thrd</name>
-        <briefdescription>
-<para>Threads for incr_position and incr_velocity. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="201" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="201" declcolumn="15"/>
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-      <memberdef kind="variable" id="global_8_h_1af76758837c4e9dbe2ab89cf956b9216c" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int psdump</definition>
-        <argsstring></argsstring>
-        <name>psdump</name>
-        <briefdescription>
-<para>Last phase space dump step. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="136" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="136" declcolumn="12"/>
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-      <memberdef kind="variable" id="global_8_h_1ad602774976cac4e518347eac0af7f11c" prot="public" static="no" extern="yes" mutable="no">
-        <type>unsigned char</type>
-        <definition>unsigned char quit_signal</definition>
-        <argsstring></argsstring>
-        <name>quit_signal</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Quit now</para>
-<para>This flag is set by checkpoint itmer </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="232" column="22" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="232" declcolumn="22"/>
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-        <type>string</type>
-        <definition>string ratefile</definition>
-        <argsstring></argsstring>
-        <name>ratefile</name>
-        <briefdescription>
-<para>Initial processor rate file. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="83" column="15" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="83" declcolumn="15"/>
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-      <memberdef kind="variable" id="global_8_h_1a8649fdfafe4f3ed5fa96bb5261379247" prot="public" static="no" extern="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool restart</definition>
-        <argsstring></argsstring>
-        <name>restart</name>
-        <briefdescription>
-<para>Global set on restart (to used by initializers and user modules) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="118" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="118" declcolumn="13"/>
-        <referencedby refid="classprogress_1_1progress__display_1a0c5dbbd210b906fea6360f7f4f29a07a" compoundref="_progress_8_h" startline="39" endline="45">progress::progress_display::progress_display</referencedby>
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-        <type>unsigned</type>
-        <definition>unsigned shiftlevl</definition>
-        <argsstring></argsstring>
-        <name>shiftlevl</name>
-        <briefdescription>
-<para>Constrain level changes per step (default: 0 means no constraint) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="89" column="17" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="89" declcolumn="17"/>
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-      <memberdef kind="variable" id="global_8_h_1ab8db74cb92c09c21783b488d231fb464" prot="public" static="no" extern="yes" mutable="no">
-        <type>std::vector&lt; int &gt;</type>
-        <definition>std::vector&lt;int&gt; siblingList</definition>
-        <argsstring></argsstring>
-        <name>siblingList</name>
-        <briefdescription>
-<para>List of sibling ranks. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="250" column="20" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="250" declcolumn="20"/>
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-      <memberdef kind="variable" id="global_8_h_1a37a81d21ee23bb0b038d33c2739fd1c5" prot="public" static="no" extern="yes" mutable="no">
-        <type>bool</type>
-        <definition>bool step_timing</definition>
-        <argsstring></argsstring>
-        <name>step_timing</name>
-        <briefdescription>
-<para>Step timing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="130" column="13" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="130" declcolumn="13"/>
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-      <memberdef kind="variable" id="global_8_h_1ae3e742d9bd58bdcb877de6e799dc2a11" prot="public" static="no" extern="yes" mutable="no">
-        <type>unsigned char</type>
-        <definition>unsigned char stop_signal</definition>
-        <argsstring></argsstring>
-        <name>stop_signal</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Stop on next step</para>
-<para>This flag is set by signalling the root process with SIGTERM </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="225" column="22" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="225" declcolumn="22"/>
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-      <memberdef kind="variable" id="global_8_h_1a9966c2c13588eb5028797f9a4b7acf5f" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int stop_signal0</definition>
-        <argsstring></argsstring>
-        <name>stop_signal0</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>Implementation variables for handlers </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="235" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="235" declcolumn="12"/>
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-      <memberdef kind="variable" id="global_8_h_1a75043af440748a82fcf73bb6948b476e" prot="public" static="no" extern="yes" mutable="no">
-        <type>int</type>
-        <definition>int this_step</definition>
-        <argsstring></argsstring>
-        <name>this_step</name>
-        <briefdescription>
-<para>Current Nbody step id. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="157" column="12" declfile="/home/weinberg/Projects/EXP/src/global.H" declline="157" declcolumn="12"/>
-        <referencedby refid="class_cylinder_1a5c444052ebe63288e65ea8da6f3a2918" compoundref="_cylinder_8_h" startline="417" endline="430">Cylinder::multistep_update_begin</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="global_8_h_1aee2e12c455ac1712da2b8c5a7eadb147" prot="public" static="no" extern="yes" mutable="no">
-        <type>double</type>
-        <definition>double tnow</definition>
-        <argsstring></argsstring>
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-<codeline lineno="187" refid="structthrd__pass__posvel_1a68df87648fa189497db1136090925eca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="structthrd__pass__posvel_1a68df87648fa189497db1136090925eca" kindref="member">dt</ref>;</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"></highlight></codeline>
-<codeline lineno="190" refid="structthrd__pass__posvel_1a5e79046aca11e013713e0f9b94f2bb82" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="structthrd__pass__posvel_1a5e79046aca11e013713e0f9b94f2bb82" kindref="member">mlevel</ref>;</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193" refid="structthrd__pass__posvel_1a5fef752c3b812831522b33e73133c81e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="structthrd__pass__posvel_1a5fef752c3b812831522b33e73133c81e" kindref="member">id</ref>;</highlight></codeline>
-<codeline lineno="194"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight></codeline>
-<codeline lineno="196"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/>vector&lt;thrd_pass_posvel&gt;<sp/><ref refid="global_8_h_1a4ed092beb16afee59d5d3027ff7815e3" kindref="member">posvel_data</ref>;</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"></highlight></codeline>
-<codeline lineno="201"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/>vector&lt;pthread_t&gt;<sp/><ref refid="global_8_h_1a8edc685f083ec1e94f0f795d0b1cf6f6" kindref="member">posvel_thrd</ref>;</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a41bc2d24fbdcce1a20df5fd464670d3b" kindref="member">ignore_info</ref>;</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="211"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1ae580ea2f336fc5dfa122b75b9d5f1c29" kindref="member">all_couples</ref>;</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight></codeline>
-<codeline lineno="218"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a32cdb52c36acd3cc3456caa6eb6355ad" kindref="member">dump_signal</ref>;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"></highlight></codeline>
-<codeline lineno="225"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1ae3e742d9bd58bdcb877de6e799dc2a11" kindref="member">stop_signal</ref>;</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="232"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1ad602774976cac4e518347eac0af7f11c" kindref="member">quit_signal</ref>;</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a9966c2c13588eb5028797f9a4b7acf5f" kindref="member">stop_signal0</ref>;</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a02481c44bf59a34959d709f59fd28c9e" kindref="member">dump_signal0</ref>;</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>MPI<sp/>variables</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="239"><highlight class="normal"></highlight></codeline>
-<codeline lineno="241"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a4988f08f2acb7a37c1b1a9c4e493b5ce" kindref="member">is_init</ref>;</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/>MPI_Comm<sp/><ref refid="global_8_h_1aed81e434ac70ad715ebc7559c1e1e2cd" kindref="member">MPI_COMM_WORKER</ref>;</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="247"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/>std::map&lt;std::string,<sp/>std::vector&lt;int&gt;<sp/>&gt;<sp/><ref refid="global_8_h_1aa942c9c85282e2ef97e4ad7e8bfa29bd" kindref="member">nameMap</ref>;</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"></highlight></codeline>
-<codeline lineno="250"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/>std::vector&lt;int&gt;<sp/><ref refid="global_8_h_1ab8db74cb92c09c21783b488d231fb464" kindref="member">siblingList</ref>;</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"></highlight></codeline>
-<codeline lineno="255"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_cyl_coef_header" kindref="compound">CylCoefHeader</ref><sp/><sp/><ref refid="global_8_h_1a969804c7cbc6238ce258cf2b5b44a59d" kindref="member">coefheadercyl</ref>;</highlight></codeline>
-<codeline lineno="257"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_sph_coef_header" kindref="compound">SphCoefHeader</ref><sp/><sp/><ref refid="global_8_h_1a058880ce947a8186f5395d65775c8951" kindref="member">coefheadersph</ref>;</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"></highlight></codeline>
-<codeline lineno="260"><highlight class="normal"></highlight></codeline>
-<codeline lineno="261"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Particle<sp/>components</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="262"><highlight class="normal"></highlight></codeline>
-<codeline lineno="264"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_component_container" kindref="compound">ComponentContainer</ref>;</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/><ref refid="class_component_container" kindref="compound">ComponentContainer</ref><sp/>*<ref refid="global_8_h_1ae1a3198745d4fefb926a291369103d3f" kindref="member">comp</ref>;</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="267"><highlight class="normal"></highlight><highlight class="comment">//<sp/>External<sp/>forces</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="268"><highlight class="normal"></highlight></codeline>
-<codeline lineno="270"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_external_collection" kindref="compound">ExternalCollection</ref>;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/><ref refid="class_external_collection" kindref="compound">ExternalCollection</ref><sp/>*<ref refid="global_8_h_1aaee6a7367d890c38c86d2cdcc2ad9cbf" kindref="member">external</ref>;</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"></highlight></codeline>
-<codeline lineno="273"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Output<sp/>list</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="274"><highlight class="normal"></highlight></codeline>
-<codeline lineno="275"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_output_container" kindref="compound">OutputContainer</ref>;</highlight></codeline>
-<codeline lineno="277"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/><ref refid="class_output_container" kindref="compound">OutputContainer</ref><sp/>*<ref refid="global_8_h_1aa4b58afce7110c34964275a183c39e62" kindref="member">output</ref>;</highlight></codeline>
-<codeline lineno="278"><highlight class="normal"></highlight></codeline>
-<codeline lineno="280"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/>YAML::Node<sp/><ref refid="global_8_h_1a735b1ce7a340373ac87191026132d105" kindref="member">parse</ref>;</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"></highlight></codeline>
-<codeline lineno="283"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a01143f6725f562bed4255476fa737925" kindref="member">runtime</ref>;</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"></highlight></codeline>
-<codeline lineno="286" refid="global_8_h_1a79830924a920190593f9a1d81206b42d" refkind="member"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a5476753eace29f10635dd0997326caef" kindref="member">lastPS</ref>,<sp/><ref refid="global_8_h_1a79830924a920190593f9a1d81206b42d" kindref="member">lastPSQ</ref>,<sp/><ref refid="global_8_h_1a62585d06a8e49b36c2d2d76c090ac20a" kindref="member">lastPSR</ref>;</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"></highlight></codeline>
-<codeline lineno="289"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/><ref refid="class_checkpoint_timer" kindref="compound">CheckpointTimer</ref><sp/><ref refid="global_8_h_1acba9660dd6a22551d7bf96ae16fdfb29" kindref="member">chktimer</ref>;</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"></highlight></codeline>
-<codeline lineno="293"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1af43954febeb3c195d2d7ada7dfff9025" kindref="member">restart_cmd</ref>;</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"></highlight></codeline>
-<codeline lineno="296"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/>MPI_Datatype<sp/><ref refid="global_8_h_1aabdbaacaa617bdc02e17d0496697c5a4" kindref="member">MPI_EXP_KEYTYPE</ref>;</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/><ref refid="class_barrier_wrapper" kindref="compound">BarrierWrapper</ref><sp/>*<ref refid="global_8_h_1abdcc1508a5de0342b0f458ab91e5a17c" kindref="member">barrier</ref>;</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"></highlight></codeline>
-<codeline lineno="302"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a358c440f6f0837bfb64a8f88ba103a26" kindref="member">barrier_check</ref>;</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"></highlight></codeline>
-<codeline lineno="305"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a9b47b634fe1f19fcf64c207c3f6a75c7" kindref="member">barrier_debug</ref>;</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight></codeline>
-<codeline lineno="308"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1ab9391df1adf96c212739de35979dd988" kindref="member">barrier_extra</ref>;</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"></highlight></codeline>
-<codeline lineno="311"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a146fecec3cba63b7082b9affd48390ed" kindref="member">barrier_label</ref>;</highlight></codeline>
-<codeline lineno="312"><highlight class="normal"></highlight></codeline>
-<codeline lineno="314"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a0dd5a41f849ed3ae82fcdb2376fc70fb" kindref="member">barrier_light</ref>;</highlight></codeline>
-<codeline lineno="315"><highlight class="normal"></highlight></codeline>
-<codeline lineno="317"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1ad312e23f29dd821ea4f290afa5689950" kindref="member">barrier_quiet</ref>;</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"></highlight></codeline>
-<codeline lineno="322"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><ref refid="global_8_h_1a2d5327a407d0af61e6e0a06221fc5a7b" kindref="member">rlimit_val</ref>;</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"></highlight></codeline>
-<codeline lineno="325"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1ae3fbd2f6eb3ab1b55e94fc277ab00328" kindref="member">debug_wait</ref>;</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1ab92be6ba951b6af1ccda46e3b228ea83" kindref="member">main_wait</ref>;</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"></highlight></codeline>
-<codeline lineno="329"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a0ad8ed6e0196a9477f123c6bf569233b" kindref="member">use_cuda</ref>;</highlight></codeline>
-<codeline lineno="330"><highlight class="normal"></highlight></codeline>
-<codeline lineno="332"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1a208eb1eecdfa4ea82b24ca6715636463" kindref="member">leapfrog_cuda</ref>;</highlight></codeline>
-<codeline lineno="333"><highlight class="normal"></highlight></codeline>
-<codeline lineno="336"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="global_8_h_1ad8f58d79bc8e3e3dec8f778ab8a4b3aa" kindref="member">random_seed</ref>;</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"></highlight></codeline>
-<codeline lineno="339"><highlight class="preprocessor">#include<sp/>&lt;<ref refid="libvars_8_h" kindref="compound">libvars.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="340"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">__EXP__;</highlight></codeline>
-<codeline lineno="341"><highlight class="normal"></highlight></codeline>
-<codeline lineno="343"><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="global_8_h_1ae5fcffdfa527121d2b3f80644536edbd" kindref="member">cuda_prof</ref>;</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"></highlight></codeline>
-<codeline lineno="345"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&quot;<ref refid="_species_8_h" kindref="compound">Species.H</ref>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="346"><highlight class="normal"></highlight></codeline>
-<codeline lineno="347"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>HAVE_LIBCUDA==1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="348"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>cudaGlobalDevice;</highlight></codeline>
-<codeline lineno="349"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined<sp/>(__NVCC__)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="350"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cudaUtil.cuH&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="351"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/>thrust::device_vector&lt;int&gt;<sp/>cuDstepL,<sp/>cuDstepN;</highlight></codeline>
-<codeline lineno="352"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="353"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="354"><highlight class="normal"></highlight></codeline>
-<codeline lineno="355"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/src/global.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/global__key__set_8_h.xml b/doxyxml/global__key__set_8_h.xml
deleted file mode 100644
index 381bfac..0000000
--- a/doxyxml/global__key__set_8_h.xml
+++ /dev/null
@@ -1,86 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="global__key__set_8_h" kind="file" language="C++">
-    <compoundname>global_key_set.H</compoundname>
-    <sectiondef kind="var">
-      <memberdef kind="variable" id="global__key__set_8_h_1a89800fe0f67ca7726c36c6d72ff9d86c" prot="public" static="no" mutable="no">
-        <type>const std::set&lt; std::string &gt;</type>
-        <definition>const std::set&lt;std::string&gt; global_valid_keys</definition>
-        <argsstring></argsstring>
-        <name>global_valid_keys</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global_key_set.H" line="2" column="1" bodyfile="/home/weinberg/Projects/EXP/src/global_key_set.H" bodystart="2" bodyend="57"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::set&lt;std::string&gt;</highlight></codeline>
-<codeline lineno="2" refid="global__key__set_8_h_1a89800fe0f67ca7726c36c6d72ff9d86c" refkind="member"><highlight class="normal"><ref refid="global__key__set_8_h_1a89800fe0f67ca7726c36c6d72ff9d86c" kindref="member">global_valid_keys</ref><sp/>=<sp/>{</highlight></codeline>
-<codeline lineno="3"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;nsteps&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="4"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;nthrds&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="5"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;ngpus&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="6"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;nreport&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="7"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;nbalance&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;dbthresh&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;time&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;dtime&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;PFbufsz&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;NICE&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;VERBOSE&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;rlimit&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;runtime&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/><sp/></highlight><highlight class="stringliteral">&quot;multistep&quot;</highlight><highlight class="normal">,</highlight></codeline>
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-<codeline lineno="34"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_component_header" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_component_header" kindref="compound">ComponentHeader</ref><sp/></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="43" refid="class_component_header_1adbc701a318d16c3801ae8e3bbc9abc8d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1adbc701a318d16c3801ae8e3bbc9abc8d" kindref="member">nbod</ref>;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_component_header_1aba4fd93dbac413df72a87c414a0d7c54" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1aba4fd93dbac413df72a87c414a0d7c54" kindref="member">niatr</ref>;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_component_header_1ac8ca5923a927b86910716613d589a6dc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1ac8ca5923a927b86910716613d589a6dc" kindref="member">ndatr</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" kindref="member">ninfochar</ref>;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;char&gt;<sp/><ref refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" kindref="member">info</ref>;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="58" refid="class_component_header_1af62c07db9d54ed90f507d904f52fc38a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1af62c07db9d54ed90f507d904f52fc38a" kindref="member">defaultInfoSize</ref>;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61" refid="class_component_header_1a92e952f6c00b6d706f1b0d51017da56e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component_header_1a92e952f6c00b6d706f1b0d51017da56e" kindref="member">ComponentHeader</ref>()<sp/></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" kindref="member">ninfochar</ref><sp/>=<sp/><ref refid="class_component_header_1af62c07db9d54ed90f507d904f52fc38a" kindref="member">defaultInfoSize</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>this<sp/>as<sp/>of<sp/>C++17</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>info<sp/>=<sp/>std::make_shared&lt;char[]&gt;(ninfochar+1);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>C++14<sp/>workaround:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" kindref="member">info</ref><sp/>=<sp/>std::shared_ptr&lt;char&gt;(</highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">[<ref refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" kindref="member">ninfochar</ref>+1],</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::default_delete&lt;</highlight><highlight class="keywordtype">char</highlight><highlight class="normal">[]&gt;());</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/>std::fill(<ref refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" kindref="member">info</ref>.get(),<sp/><ref refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" kindref="member">info</ref>.get()+<ref refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" kindref="member">ninfochar</ref>+1,<sp/>0);</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_component_header_1af20ccd285e7f059f5a4a9f1b01de541a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_component_header_1af20ccd285e7f059f5a4a9f1b01de541a" kindref="member">ComponentHeader</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" kindref="member">ninfochar</ref><sp/>=<sp/>n;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Use<sp/>this<sp/>as<sp/>of<sp/>C++17</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>info<sp/>=<sp/>std::make_shared&lt;char[]&gt;(ninfochar+1);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>C++14<sp/>workaround:</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" kindref="member">info</ref><sp/>=<sp/>std::shared_ptr&lt;char&gt;(</highlight><highlight class="keyword">new</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">[<ref refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" kindref="member">ninfochar</ref>+1],</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::default_delete&lt;</highlight><highlight class="keywordtype">char</highlight><highlight class="normal">[]&gt;());</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/>std::fill(<ref refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" kindref="member">info</ref>.get(),<sp/><ref refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" kindref="member">info</ref>.get()+<ref refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" kindref="member">ninfochar</ref>+1,<sp/>0);</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_component_header_1a311e3d9b8a0c66cf9148e73fc85bfbe9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1a311e3d9b8a0c66cf9148e73fc85bfbe9" kindref="member">write</ref>(ostream<sp/>*out);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90" refid="class_component_header_1a55cc35a1d4bf5329da2d19b8ac9f23cb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1a55cc35a1d4bf5329da2d19b8ac9f23cb" kindref="member">write_mpi</ref>(MPI_File&amp;<sp/>out,<sp/>MPI_Offset&amp;<sp/>offset);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_component_header_1a565d1ca7343e35c48387e69ca0f924f1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1a565d1ca7343e35c48387e69ca0f924f1" kindref="member">read</ref>(istream<sp/>*in);</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="class_component_header_1a072c894dff0c7f24f68af4f786347bc9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_component_header_1a072c894dff0c7f24f68af4f786347bc9" kindref="member">getSize</ref>()</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(int)*4<sp/>+<sp/><ref refid="class_component_header_1af3ebdc1825b61cb7ee27858d26966282" kindref="member">ninfochar</ref>;</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101" refid="class_component_header_1a4fe829090b21722256ef4ddbcc01eb73" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/>std::ostream&amp;<sp/><ref refid="class_component_header_1a4fe829090b21722256ef4ddbcc01eb73" kindref="member">operator&lt;&lt;</ref>(<sp/>std::ostream&amp;<sp/>os,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_component_header" kindref="compound">ComponentHeader</ref>&amp;<sp/>p<sp/>)<sp/></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/>os<sp/>&lt;&lt;<sp/>std::setw(14)<sp/>&lt;&lt;<sp/>std::right<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Nbod&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(14)<sp/>&lt;&lt;<sp/>std::left<sp/><sp/>&lt;&lt;<sp/>p.<ref refid="class_component_header_1adbc701a318d16c3801ae8e3bbc9abc8d" kindref="member">nbod</ref><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(14)<sp/>&lt;&lt;<sp/>std::right<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;N(int)&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(14)<sp/>&lt;&lt;<sp/>std::left<sp/><sp/>&lt;&lt;<sp/>p.<ref refid="class_component_header_1aba4fd93dbac413df72a87c414a0d7c54" kindref="member">niatr</ref><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(14)<sp/>&lt;&lt;<sp/>std::right<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;N(real)&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(14)<sp/>&lt;&lt;<sp/>std::left<sp/><sp/>&lt;&lt;<sp/>p.<ref refid="class_component_header_1ac8ca5923a927b86910716613d589a6dc" kindref="member">ndatr</ref><sp/>&lt;&lt;<sp/>std::endl</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(14)<sp/>&lt;&lt;<sp/>std::right<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Info&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;<sp/>:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>std::setw(60)<sp/>&lt;&lt;<sp/>std::right<sp/>&lt;&lt;<sp/>p.<ref refid="class_component_header_1a51f61d57f69385929030a09a658a4ce5" kindref="member">info</ref><sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>os;</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"></highlight></codeline>
-<codeline lineno="115"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/header.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/hernquist__model_8_h.xml b/doxyxml/hernquist__model_8_h.xml
deleted file mode 100644
index 2f978ec..0000000
--- a/doxyxml/hernquist__model_8_h.xml
+++ /dev/null
@@ -1,240 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="hernquist__model_8_h" kind="file" language="C++">
-    <compoundname>hernquist_model.H</compoundname>
-    <includes local="no">cmath</includes>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
-      <node id="21">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
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-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
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-        </childnode>
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-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/hernquist_model.H</label>
-        <link refid="hernquist__model_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="2">
-        <label>cmath</label>
-      </node>
-      <node id="19">
-        <label>cstdlib</label>
-      </node>
-      <node id="9">
-        <label>deque</label>
-      </node>
-      <node id="14">
-        <label>functional</label>
-      </node>
-      <node id="17">
-        <label>iomanip</label>
-      </node>
-      <node id="16">
-        <label>iostream</label>
-      </node>
-      <node id="11">
-        <label>map</label>
-      </node>
-      <node id="5">
-        <label>memory</label>
-      </node>
-      <node id="6">
-        <label>random</label>
-      </node>
-      <node id="18">
-        <label>sstream</label>
-      </node>
-      <node id="12">
-        <label>string</label>
-      </node>
-      <node id="4">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_hernquist_sphere" prot="public">HernquistSphere</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_hernquistmodel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_hernquistmodel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="class_hernquist_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_hernquist_sphere" kindref="compound">HernquistSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="8"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="10" refid="class_hernquist_sphere_1aa094a060562a5b421cc451a674ff0296" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1aa094a060562a5b421cc451a674ff0296" kindref="member">rot</ref>;</highlight></codeline>
-<codeline lineno="11" refid="class_hernquist_sphere_1a0687c820fdfe76c1490906ebfff13255" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a0687c820fdfe76c1490906ebfff13255" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="12" refid="class_hernquist_sphere_1a369aaa81a491be8984c2f41ca5a89ec8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a369aaa81a491be8984c2f41ca5a89ec8" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="13" refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>;</highlight></codeline>
-<codeline lineno="14" refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_hernquist_sphere_1a984f3ad39bf053316522666c3318af89" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_hernquist_sphere_1a984f3ad39bf053316522666c3318af89" kindref="member">HernquistSphere</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RSCL<sp/>=<sp/>1.0,<sp/></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMIN<sp/>=<sp/>1.0e-6,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX<sp/>=<sp/>1.0e6,<sp/></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>TOLE=1.0e-5)</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/><ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref><sp/>=<sp/>RSCL;<sp/><ref refid="class_hernquist_sphere_1a0687c820fdfe76c1490906ebfff13255" kindref="member">rmin</ref><sp/>=<sp/>RMIN;<sp/><ref refid="class_hernquist_sphere_1a369aaa81a491be8984c2f41ca5a89ec8" kindref="member">rmax</ref><sp/>=<sp/>RMAX;<sp/></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;HernquistSphere&quot;</highlight><highlight class="normal">;<sp/></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/>=<sp/>3;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref><sp/>=<sp/>TOLE;<sp/>}</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_hernquist_sphere_1ad71a1eef352f07e5da69e0ad33d3869a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1ad71a1eef352f07e5da69e0ad33d3869a" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r*r*pow(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>,-2.0);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_hernquist_sphere_1a85bbadfba50fe5f4e81b00e5eb68b5fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a85bbadfba50fe5f4e81b00e5eb68b5fe" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>/(2.0*M_PI*r)*pow(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>,-3.0);</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_hernquist_sphere_1a6aed89baa36f399e4ae381857032ee02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a6aed89baa36f399e4ae381857032ee02" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-1.0/(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>);</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_hernquist_sphere_1a926ec2665ba371cb35b5f43df81c1d90" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a926ec2665ba371cb35b5f43df81c1d90" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0/(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>)/(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>);</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_hernquist_sphere_1abb190a388e0df34ac058c739c8dde702" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1abb190a388e0df34ac058c739c8dde702" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-2.0/(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>)/(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>)/(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="52" refid="class_hernquist_sphere_1a57fe33d175c333d8f7df0b9689d25234" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a57fe33d175c333d8f7df0b9689d25234" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/>{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/>ur<sp/>=<sp/>-1.0/(r+<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>);<sp/>dur<sp/>=<sp/>ur*ur;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_hernquist_sphere_1ae6d8d9df1927efa05224264452ca0f84" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1ae6d8d9df1927efa05224264452ca0f84" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a0687c820fdfe76c1490906ebfff13255" kindref="member">rmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="59" refid="class_hernquist_sphere_1a97a291bb7c67e70f74abc79ae841ead8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a97a291bb7c67e70f74abc79ae841ead8" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a369aaa81a491be8984c2f41ca5a89ec8" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61" refid="class_hernquist_sphere_1a8b0132401b94171ffaf309792ac7b989" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a8b0132401b94171ffaf309792ac7b989" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>q,cq;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/>q<sp/>=<sp/>sqrt(-<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>*E);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/>cq<sp/>=<sp/>sqrt(1.0-q*q);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.125/(M_SQRT2*M_PI*M_PI*M_PI)<sp/>/(cq*cq*cq*cq*cq*pow(<ref refid="class_hernquist_sphere_1a85e8ade11ce479674207e85e6af19b68" kindref="member">rscl</ref>,<sp/>1.5))<sp/>*</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>(<sp/>3.0*asin(q)<sp/>+<sp/>q*cq*(1.0<sp/>-<sp/>2.0*q*q)*(8.0*q*q*(q*q<sp/>-<sp/>1.0)<sp/>-<sp/>3.0)<sp/>);</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_hernquist_sphere_1aa0d27f1e5dc455ddcf49e10202a853f1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1aa0d27f1e5dc455ddcf49e10202a853f1" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.5*(<ref refid="class_hernquist_sphere_1a8b0132401b94171ffaf309792ac7b989" kindref="member">distf</ref>(E+<ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref>,L)-<ref refid="class_hernquist_sphere_1a8b0132401b94171ffaf309792ac7b989" kindref="member">distf</ref>(E-<ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref>,L))/<ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref>;</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_hernquist_sphere_1a6005707847dfe35ca2b6e423a7f40c97" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1a6005707847dfe35ca2b6e423a7f40c97" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="class_hernquist_sphere_1afab9f5efb35adb4e61e5b3758e90a2ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_sphere_1afab9f5efb35adb4e61e5b3758e90a2ac" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(<ref refid="class_hernquist_sphere_1a8b0132401b94171ffaf309792ac7b989" kindref="member">distf</ref>(E+<ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref>,L)+<ref refid="class_hernquist_sphere_1a8b0132401b94171ffaf309792ac7b989" kindref="member">distf</ref>(E-<ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref>,L)<sp/>-<sp/>2*<ref refid="class_hernquist_sphere_1a8b0132401b94171ffaf309792ac7b989" kindref="member">distf</ref>(E,L))/(<ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref>*<ref refid="class_hernquist_sphere_1ad7dc5d0d7044fc41178167e23f803c67" kindref="member">tolE</ref>);</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/hernquist_model.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/hunter_8_h.xml b/doxyxml/hunter_8_h.xml
deleted file mode 100644
index 26d62e6..0000000
--- a/doxyxml/hunter_8_h.xml
+++ /dev/null
@@ -1,271 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="hunter_8_h" kind="file" language="C++">
-    <compoundname>hunter.H</compoundname>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <includedby refid="_hunter_x_8_h" local="no">/home/weinberg/Projects/EXP/include/HunterX.H</includedby>
-    <incdepgraph>
-      <node id="20">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/hunter.H</label>
-        <link refid="hunter_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="18">
-        <label>cstdlib</label>
-      </node>
-      <node id="8">
-        <label>deque</label>
-      </node>
-      <node id="13">
-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
-      </node>
-      <node id="15">
-        <label>iostream</label>
-      </node>
-      <node id="10">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="5">
-        <label>random</label>
-      </node>
-      <node id="17">
-        <label>sstream</label>
-      </node>
-      <node id="11">
-        <label>string</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/HunterX.H</label>
-        <link refid="_hunter_x_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/hunter.H</label>
-        <link refid="hunter_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_hunter_disk" prot="public">HunterDisk</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Hunter&apos;s<sp/>Legendre<sp/>Models</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//<sp/>1964,<sp/>MN,<sp/>129,<sp/>321</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_hunter_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_hunter_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_hunter_disk" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_hunter_disk" kindref="compound">HunterDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="15" refid="class_hunter_disk_1afff8fe078ebf1d8711614ec4f7ef0014" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1afff8fe078ebf1d8711614ec4f7ef0014" kindref="member">n</ref>;</highlight></codeline>
-<codeline lineno="16" refid="class_hunter_disk_1a70eb6b3d3d47eb2bbcaeffd2f0563489" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a6687d3c573a707f9b72cc97d4adac59d" kindref="member">rmax</ref>,<sp/><ref refid="class_hunter_disk_1a70eb6b3d3d47eb2bbcaeffd2f0563489" kindref="member">mass</ref>,<sp/><ref refid="class_hunter_disk_1abf01ce72bdade42bbe5eaee91d817d98" kindref="member">rcut</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_hunter_disk_1a88454d3b998edb9c198abb3e16ac3e5e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a124bae6cdffff5bd40cc122d035d4e4c" kindref="member">sfac</ref>,<sp/><ref refid="class_hunter_disk_1a38a02ba1ecec55948df5849f0ebade11" kindref="member">omfac</ref>,<sp/><ref refid="class_hunter_disk_1a7a08c35750e9e390621f30ffe62c6ae8" kindref="member">pfac</ref>,<sp/><ref refid="class_hunter_disk_1a88454d3b998edb9c198abb3e16ac3e5e" kindref="member">kfac</ref>;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_hunter_disk_1abdf5098713085801ee54b617bad71dd3" refkind="member"><highlight class="normal"><sp/><sp/>Vector<sp/><ref refid="class_hunter_disk_1ade5637c7bd38f07cfd076ec3bb5157cf" kindref="member">gam</ref>,<sp/><ref refid="class_hunter_disk_1abdf5098713085801ee54b617bad71dd3" kindref="member">cvec</ref>;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_hunter_disk_1a24a0924957dad7e0c0f88c2f07d0895f" refkind="member"><highlight class="normal"><sp/><sp/>Logic<sp/><ref refid="class_hunter_disk_1a24a0924957dad7e0c0f88c2f07d0895f" kindref="member">model_setup</ref>;</highlight></codeline>
-<codeline lineno="22" refid="class_hunter_disk_1ae6d965d87d1cf5be7608fd66d9de3b41" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1ae6d965d87d1cf5be7608fd66d9de3b41" kindref="member">setup_model</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="23" refid="class_hunter_disk_1a3daf9fabb6eeb29fe19b441061b4f29e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a3daf9fabb6eeb29fe19b441061b4f29e" kindref="member">nint</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="class_hunter_disk_1a1137c0681e72b99035015b1d4501716a" refkind="member"><highlight class="normal"><sp/><sp/>Vector<sp/><ref refid="class_hunter_disk_1a5d9dc6c1a508e857e3b262fc96cb9878" kindref="member">vplgndr</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">),<sp/><ref refid="class_hunter_disk_1a3619ddaa065b3e24bc1c62be0869375b" kindref="member">dvplgndr</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">),<sp/><ref refid="class_hunter_disk_1a1137c0681e72b99035015b1d4501716a" kindref="member">d2vplgndr</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="27" refid="class_hunter_disk_1aa8c7bd3888aaf6c8848490cd28a40b7f" refkind="member"><highlight class="normal"><sp/><sp/>Logic<sp/><ref refid="class_hunter_disk_1aa8c7bd3888aaf6c8848490cd28a40b7f" kindref="member">mass_setup</ref>;</highlight></codeline>
-<codeline lineno="28" refid="class_hunter_disk_1afa468a36fe2362936e72ada1f4a729a9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1afa468a36fe2362936e72ada1f4a729a9" kindref="member">setup_mass</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="29" refid="class_hunter_disk_1a1b362f6d37cb2738b508366161046af6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a1b362f6d37cb2738b508366161046af6" kindref="member">mgrid</ref>;</highlight></codeline>
-<codeline lineno="30" refid="class_hunter_disk_1ad15ebfaf68f042d8af7f372b42821203" refkind="member"><highlight class="normal"><sp/><sp/>Vector<sp/><ref refid="class_hunter_disk_1a9a089c805396ceb5ea033aa11b59ce6a" kindref="member">r_mass</ref>,<sp/><ref refid="class_hunter_disk_1ad15ebfaf68f042d8af7f372b42821203" kindref="member">m_mass</ref>;</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_hunter_disk_1a363cd7b6341774439c02513885fb1e40" refkind="member"><highlight class="normal"><sp/><sp/>Logic<sp/><ref refid="class_hunter_disk_1a363cd7b6341774439c02513885fb1e40" kindref="member">hankel_setup</ref>;</highlight></codeline>
-<codeline lineno="33" refid="class_hunter_disk_1a47198276536f12718495b2547e045385" refkind="member"><highlight class="normal"><sp/><sp/>Vector<sp/><ref refid="class_hunter_disk_1afac88f68933ae9bd48d5fb945c0c4949" kindref="member">S_K</ref>,<sp/><ref refid="class_hunter_disk_1a47198276536f12718495b2547e045385" kindref="member">K</ref>;</highlight></codeline>
-<codeline lineno="34" refid="class_hunter_disk_1a8c56957216bf9ca56efe91e375d1f2c1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a8c56957216bf9ca56efe91e375d1f2c1" kindref="member">kmax</ref>;</highlight></codeline>
-<codeline lineno="35" refid="class_hunter_disk_1a1980d397e8f328316e23d08e7348e212" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><ref refid="class_hunter_disk_1a1980d397e8f328316e23d08e7348e212" kindref="member">nhank</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_hunter_disk_1afbc512c906143b5cc020896188c6790e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1afbc512c906143b5cc020896188c6790e" kindref="member">tabulate_hankel</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_hunter_disk_1ab6161283ab6067e78523cb3ce45120d4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1ab6161283ab6067e78523cb3ce45120d4" kindref="member">offset_p</ref>;</highlight></codeline>
-<codeline lineno="40" refid="class_hunter_disk_1aa5c2e4339ea330b5eb5be02f6c4693ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1aa5c2e4339ea330b5eb5be02f6c4693ae" kindref="member">offset_dp</ref>;</highlight></codeline>
-<codeline lineno="41" refid="class_hunter_disk_1a03f1f7db82b82043935dc35dbbf05709" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a03f1f7db82b82043935dc35dbbf05709" kindref="member">offset_dp2</ref>;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_hunter_disk_1a2aa59d0c4e6e7b14ff7025aa5dd3c84f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a2aa59d0c4e6e7b14ff7025aa5dd3c84f" kindref="member">defNINT</ref>=200;</highlight></codeline>
-<codeline lineno="44" refid="class_hunter_disk_1a2fde533420a8f0d3b7a472191853a231" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a2fde533420a8f0d3b7a472191853a231" kindref="member">defMGRID</ref>=200;</highlight></codeline>
-<codeline lineno="45" refid="class_hunter_disk_1a7599a22f73a869e0c6ed9cb9906565b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a7599a22f73a869e0c6ed9cb9906565b3" kindref="member">defNHANK</ref>=400;</highlight></codeline>
-<codeline lineno="46" refid="class_hunter_disk_1a7aeccddb17c9d8320ec9f1daf71830ec" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a7aeccddb17c9d8320ec9f1daf71830ec" kindref="member">defKMAX</ref>=20.0;</highlight></codeline>
-<codeline lineno="47" refid="class_hunter_disk_1a60885b6ff4672898796457c4d1ea72c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a60885b6ff4672898796457c4d1ea72c2" kindref="member">defRCUT</ref>=8.0;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Constructors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_hunter_disk_1a1156f9f91f6db7bb82c76c392b92fe43" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_hunter_disk_1a1156f9f91f6db7bb82c76c392b92fe43" kindref="member">HunterDisk</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX=1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>MASS=1.0);</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="55" refid="class_hunter_disk_1a04e5d347ff8c031375f00846150a9fff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a04e5d347ff8c031375f00846150a9fff" kindref="member">set_params</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>KMAX=20.0,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RCUT=8.0,<sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NINT=200,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>MGRID=200,<sp/></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NHANK=400);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_hunter_disk_1a54d5a3014d036e20d5379483e86fd316" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a54d5a3014d036e20d5379483e86fd316" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_hunter_disk_1a42a9fa1f93af1ced9f80fa63c1f7bd15" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a42a9fa1f93af1ced9f80fa63c1f7bd15" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_hunter_disk_1a275d6e4c24f2f60a4dc8e245f53602fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a275d6e4c24f2f60a4dc8e245f53602fe" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68" refid="class_hunter_disk_1af99a03a59ba0b83966f467808ad2a27a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1af99a03a59ba0b83966f467808ad2a27a" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_hunter_disk_1a25b4689e9ac2cdef2c021ee18e0bafdb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a25b4689e9ac2cdef2c021ee18e0bafdb" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_hunter_disk_1a289f52f9c77980fafde8fa76ebe9528b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a289f52f9c77980fafde8fa76ebe9528b" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76" refid="class_hunter_disk_1a2a2476206cb5f4e62a3ca2db46837a6b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a2a2476206cb5f4e62a3ca2db46837a6b" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>double<sp/>get_max_radius(void)<sp/>{<sp/>return<sp/>rmax;<sp/>}</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78" refid="class_hunter_disk_1a3c62bdf7240114cd0b33299b8e6252c4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a3c62bdf7240114cd0b33299b8e6252c4" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0e10;<sp/>}</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_hunter_disk_1a615ce48a7e56365fa147b8c942ef29cb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a615ce48a7e56365fa147b8c942ef29cb" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Function<sp/>&lt;distf&gt;<sp/>not<sp/>implemented&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_hunter_disk_1ae5befb0384c024c55cfbe426854d5fda" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1ae5befb0384c024c55cfbe426854d5fda" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Function<sp/>&lt;dfde&gt;<sp/>not<sp/>implemented&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_hunter_disk_1a84dc8c74bcfa02317ebe9ff29bbe45dd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a84dc8c74bcfa02317ebe9ff29bbe45dd" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Function<sp/>&lt;dfdl&gt;<sp/>not<sp/>implemented&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_hunter_disk_1a673cc41f41f7bc72593c5419eb5e8987" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a673cc41f41f7bc72593c5419eb5e8987" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;Function<sp/>&lt;d2fde2&gt;<sp/>not<sp/>implemented&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="class_hunter_disk_1a9f2470c94a8ec620d96a7eea14f5732b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a9f2470c94a8ec620d96a7eea14f5732b" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_hunter_disk_1ad9076b5c77a753e868411485681602a5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1ad9076b5c77a753e868411485681602a5" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_hunter_disk_1a05ba212df8a443c0ea94a8d5a9f3446d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a05ba212df8a443c0ea94a8d5a9f3446d" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_hunter_disk_1a9388a8bdb5d0b369292193dae69aa84c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hunter_disk_1a9388a8bdb5d0b369292193dae69aa84c" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur);</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/hunter.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/include_2_particle_8_h.xml b/doxyxml/include_2_particle_8_h.xml
deleted file mode 100644
index c21c676..0000000
--- a/doxyxml/include_2_particle_8_h.xml
+++ /dev/null
@@ -1,327 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="include_2_particle_8_h" kind="file" language="C++">
-    <compoundname>Particle.H</compoundname>
-    <includes local="no">unordered_map</includes>
-    <includes local="no">vector</includes>
-    <includes local="no">memory</includes>
-    <includedby refid="_emp_cyl_s_l_8_h" local="no">/home/weinberg/Projects/EXP/include/EmpCylSL.H</includedby>
-    <includedby refid="_particle_reader_8_h" local="no">/home/weinberg/Projects/EXP/include/ParticleReader.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="2">
-        <label>unordered_map</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/include/DiskModels.H</label>
-        <link refid="_disk_models_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/Particle.H</label>
-        <link refid="include_2_particle_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>/home/weinberg/Projects/EXP/include/ParticleReader.H</label>
-        <link refid="_particle_reader_8_h"/>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="7">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="10">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/src/TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H</label>
-        <link refid="_cyl_disk_8_h"/>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H</label>
-        <link refid="_disk_eval_8_h"/>
-      </node>
-      <node id="12">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</label>
-        <link refid="_disk_halo_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_particle" prot="public">Particle</innerclass>
-    <innerclass refid="class_particle_buffer" prot="public">ParticleBuffer</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="include_2_particle_8_h_1a101c54b6d6078eb4deaf9cf51db53c24" prot="public" static="no">
-        <type>std::unordered_map&lt; unsigned long, <ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref> &gt;</type>
-        <definition>typedef std::unordered_map&lt;unsigned long, PartPtr&gt; PartMap</definition>
-        <argsstring></argsstring>
-        <name>PartMap</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="171" column="28" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="171" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="include_2_particle_8_h_1aa1ab6cdbac1d2824f81a094ddd9466ae" prot="public" static="no">
-        <type>std::unordered_map&lt; unsignedlong, <ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref> &gt;::iterator</type>
-        <definition>typedef std::unordered_map&lt;unsignedlong,PartPtr&gt;::iterator PartMapItr</definition>
-        <argsstring></argsstring>
-        <name>PartMapItr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="172" column="39" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="172" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_particle" kindref="compound">Particle</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;Particle&gt; PartPtr</definition>
-        <argsstring></argsstring>
-        <name>PartPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="170" column="25" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="170" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="include_2_particle_8_h_1a7ce7598fd61576bce08734064841450d" prot="public" static="no">
-        <type>std::pair&lt; unsigned long, <ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref> &gt;</type>
-        <definition>typedef std::pair&lt;unsigned long, PartPtr&gt; PMapType</definition>
-        <argsstring></argsstring>
-        <name>PMapType</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="173" column="19" bodyfile="/home/weinberg/Projects/EXP/include/Particle.H" bodystart="173" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="include_2_particle_8_h_1ac4599e478798c941aa512cbbb24cecdc" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::ostream &amp;</type>
-        <definition>std::ostream &amp; operator&lt;&lt;</definition>
-        <argsstring>(std::ostream &amp;os, const PMapType &amp;p)</argsstring>
-        <name>operator&lt;&lt;</name>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>os</declname>
-        </param>
-        <param>
-          <type>const <ref refid="include_2_particle_8_h_1a7ce7598fd61576bce08734064841450d" kindref="member">PMapType</ref> &amp;</type>
-          <declname>p</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Particle.H" line="174" column="1" declfile="/home/weinberg/Projects/EXP/include/Particle.H" declline="174" declcolumn="1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>Particle_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>Particle_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;unordered_map&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">std;</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Helper<sp/>class<sp/>for<sp/>buffered<sp/>binary<sp/>writes</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_particle_buffer" kindref="compound">ParticleBuffer</ref>;</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_particle" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_particle" kindref="compound">Particle</ref></highlight></codeline>
-<codeline lineno="19"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="class_particle_1a1fb0b2da600a8ad44057823c19938515" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;char&gt;<sp/><ref refid="class_particle_1a1fb0b2da600a8ad44057823c19938515" kindref="member">buffer</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_particle_1adf9aa4abfe0f5205fd71755d80fa36f0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="class_particle_1adf9aa4abfe0f5205fd71755d80fa36f0" kindref="member">effort_default</ref>;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_particle_1ae6d46dc24a6666d526f211151fecca5f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1ae6d46dc24a6666d526f211151fecca5f" kindref="member">mass</ref>;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_particle_1a3606e8a85c0b5ef30d7cf2777907e58e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a3606e8a85c0b5ef30d7cf2777907e58e" kindref="member">pos</ref>[3];</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37" refid="class_particle_1a13bd0267040135a338f62130ca1614d6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a13bd0267040135a338f62130ca1614d6" kindref="member">vel</ref>[3];</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_particle_1ac575fbf68c83530ee242ba22fb38a264" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1ac575fbf68c83530ee242ba22fb38a264" kindref="member">acc</ref>[3];</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="class_particle_1a235e3eb6c466429f43f4f4564e343724" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a235e3eb6c466429f43f4f4564e343724" kindref="member">pot</ref>;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="class_particle_1afffdbb3da7a0222fddde253f974b5f8a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1afffdbb3da7a0222fddde253f974b5f8a" kindref="member">potext</ref>;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="49" refid="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;int&gt;<sp/><ref refid="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" kindref="member">iattrib</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_particle_1a04153827c29d7a278023801845f9c8f3" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_particle_1a04153827c29d7a278023801845f9c8f3" kindref="member">dattrib</ref>;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_particle_1a01205d006724dc26a6f49758f2722382" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a01205d006724dc26a6f49758f2722382" kindref="member">level</ref>;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_particle_1aab8165b0c94a793caa326da0b1a5ed60" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="class_particle_1aab8165b0c94a793caa326da0b1a5ed60" kindref="member">dtreq</ref>;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="61" refid="class_particle_1a5c7aecc4ecec7c9e8c8b928bd80e35ea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a5c7aecc4ecec7c9e8c8b928bd80e35ea" kindref="member">scale</ref>;</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_particle_1a478372f50864a61ed194123ed219f721" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">float</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a478372f50864a61ed194123ed219f721" kindref="member">effort</ref>;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_particle_1a041051e4763a83554abed7304dfda4a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a041051e4763a83554abed7304dfda4a7" kindref="member">indx</ref>;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_particle_1a49d4f04b43b6200dd4cef28da20a739d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a49d4f04b43b6200dd4cef28da20a739d" kindref="member">tree</ref>;</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73" refid="class_particle_1a40fcbe2d8647d560e2a7eb1227cf4808" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a40fcbe2d8647d560e2a7eb1227cf4808" kindref="member">key</ref>;</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="75" refid="class_particle_1a7cdcdaaa7c1177c733b888e9e60d0fb9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::pair&lt;unsigned<sp/>short,<sp/>unsigned<sp/>short&gt;<sp/><ref refid="class_particle_1a7cdcdaaa7c1177c733b888e9e60d0fb9" kindref="member">speciesKey</ref>;</highlight></codeline>
-<codeline lineno="76" refid="class_particle_1a82e75d23385a26273d1d33fdde947a4a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a7cdcdaaa7c1177c733b888e9e60d0fb9" kindref="member">speciesKey</ref><sp/><ref refid="class_particle_1a82e75d23385a26273d1d33fdde947a4a" kindref="member">defaultKey</ref>;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_particle_1a25f2943d2559c9b00e52595585022a47" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_1a7cdcdaaa7c1177c733b888e9e60d0fb9" kindref="member">speciesKey</ref><sp/><ref refid="class_particle_1a25f2943d2559c9b00e52595585022a47" kindref="member">skey</ref>;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" kindref="member">Particle</ref>();</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_particle_1a56a5ccec698415615a050e9bfd820b3a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_1a56a5ccec698415615a050e9bfd820b3a" kindref="member">Particle</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>niatr,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>ndatr);</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_particle_1a875d390662507790e0b248f53bff2ad1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_1a875d390662507790e0b248f53bff2ad1" kindref="member">Particle</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_particle_1ad619d82125defc278a08e2908b6115c7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_1ad619d82125defc278a08e2908b6115c7" kindref="member">readAscii</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>seq,<sp/>std::istream*<sp/>fin);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_particle_1a5522f47432b7ed4de4584dbea0ac12c7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a5522f47432b7ed4de4584dbea0ac12c7" kindref="member">readBinary</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>seq,<sp/>std::istream<sp/>*in);</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_particle_1a63a4e5661ae98308893d86e33f059576" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a63a4e5661ae98308893d86e33f059576" kindref="member">writeAscii</ref>(</highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>accel,<sp/>std::ostream*<sp/>out);</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101" refid="class_particle_1ac36f173dd3cf6b19a6e8bf8538fabf4b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_1ac36f173dd3cf6b19a6e8bf8538fabf4b" kindref="member">writeBinaryBuffered</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing,<sp/>std::ostream<sp/>*out,<sp/><ref refid="class_particle_buffer" kindref="compound">ParticleBuffer</ref>&amp;<sp/>buf)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104" refid="class_particle_1aeae52277bb1d013be9080d87d3b6a436" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_1aeae52277bb1d013be9080d87d3b6a436" kindref="member">writeBinaryThreaded</ref></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing,<sp/><ref refid="class_particle_buffer" kindref="compound">ParticleBuffer</ref>&amp;<sp/>buf,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>count)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_particle_1a5bb1f74e19cebdb828f95af23bc386cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a5bb1f74e19cebdb828f95af23bc386cf" kindref="member">writeBinary</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing,<sp/>std::ostream<sp/>*out)<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_particle_1a6a0d56643139eafef77b04372098e34a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a6a0d56643139eafef77b04372098e34a" kindref="member">writeBinaryMPI</ref>(</highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/>buf,<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="114" refid="class_particle_1ab3e060354cd4e942646520e9af3fa341" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_1ab3e060354cd4e942646520e9af3fa341" kindref="member">getMPIBufSize</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing)</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>csize<sp/>=<sp/>(8<sp/>+<sp/><ref refid="class_particle_1a04153827c29d7a278023801845f9c8f3" kindref="member">dattrib</ref>.size())<sp/>*<sp/>rsize<sp/>+<sp/><ref refid="class_particle_1a55c3bc6bd2f03824312414c219ee0d71" kindref="member">iattrib</ref>.size()<sp/>*<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(int);</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(indexing)<sp/>csize<sp/>+=<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>long);</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>csize;</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="120"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123" refid="class_particle_buffer" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_particle_buffer" kindref="compound">ParticleBuffer</ref></highlight></codeline>
-<codeline lineno="124"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight></codeline>
-<codeline lineno="128" refid="class_particle_buffer_1ad1234c964357d82be0677be6cd3a885c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1ad1234c964357d82be0677be6cd3a885c" kindref="member">maxBufCount</ref><sp/>=<sp/>1048576;<sp/></highlight><highlight class="comment">//<sp/>1MB</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="129"><highlight class="normal"></highlight></codeline>
-<codeline lineno="130"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133" refid="class_particle_buffer_1a9214167348e2e3c4ed7cf0e1d180870b" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;char&gt;<sp/><ref refid="class_particle_buffer_1a9214167348e2e3c4ed7cf0e1d180870b" kindref="member">charBuffer</ref>;</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136" refid="class_particle_buffer_1ac4ed20cda1ff2f216fb886b0cd0ab41e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1ac4ed20cda1ff2f216fb886b0cd0ab41e" kindref="member">parSize</ref>;</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139" refid="class_particle_buffer_1a44acc0ab241b4073573b275d2accd74a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1a44acc0ab241b4073573b275d2accd74a" kindref="member">bufSize</ref>;</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142" refid="class_particle_buffer_1ab9a31c4716fd288293660d9a5e6277fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1ab9a31c4716fd288293660d9a5e6277fe" kindref="member">bufCount</ref>;</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight></codeline>
-<codeline lineno="144"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147" refid="class_particle_buffer_1ae0dbcb81d6e5c4f8db390f09461534ea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/><ref refid="class_particle_buffer_1ae0dbcb81d6e5c4f8db390f09461534ea" kindref="member">Loc</ref>;</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="150" refid="class_particle_buffer_1a3f6250a8f96673dcc7548c6a7d56ac8e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_buffer_1a3f6250a8f96673dcc7548c6a7d56ac8e" kindref="member">ParticleBuffer</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>rsize,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>indexing,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref><sp/>*p);</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153" refid="class_particle_buffer_1ae1db7eea29ba7f9add495c3931dc1e3b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1ae1db7eea29ba7f9add495c3931dc1e3b" kindref="member">writeBuffer</ref>(std::ostream<sp/>*out,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>finish=</highlight><highlight class="keyword">false</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156" refid="class_particle_buffer_1ab7891de1d66a6109d9433c8c2a1f6249" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1ab7891de1d66a6109d9433c8c2a1f6249" kindref="member">operator++</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>{<sp/><ref refid="class_particle_buffer_1ab9a31c4716fd288293660d9a5e6277fe" kindref="member">bufCount</ref>++;<sp/>}</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_particle_buffer_1a6c457bb37d16e709eccbdb9861fd5991" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/><ref refid="class_particle_buffer_1a6c457bb37d16e709eccbdb9861fd5991" kindref="member">operator()</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1a9214167348e2e3c4ed7cf0e1d180870b" kindref="member">charBuffer</ref>.data();<sp/>}</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_particle_buffer_1aaec0c031810fad25ca9397494ebb34fc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1aaec0c031810fad25ca9397494ebb34fc" kindref="member">setLocation</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n)<sp/>{<sp/><ref refid="class_particle_buffer_1ae0dbcb81d6e5c4f8db390f09461534ea" kindref="member">Loc</ref><sp/>=<sp/><ref refid="class_particle_buffer_1a9214167348e2e3c4ed7cf0e1d180870b" kindref="member">charBuffer</ref>.data()<sp/>+<sp/><ref refid="class_particle_buffer_1ac4ed20cda1ff2f216fb886b0cd0ab41e" kindref="member">parSize</ref>*n;<sp/>}</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165" refid="class_particle_buffer_1a26df2a34f52bd857b23a213246609816" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1a26df2a34f52bd857b23a213246609816" kindref="member">pMemSize</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_particle_buffer_1ac4ed20cda1ff2f216fb886b0cd0ab41e" kindref="member">parSize</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight></codeline>
-<codeline lineno="169"><highlight class="normal"></highlight></codeline>
-<codeline lineno="170" refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;Particle&gt;<sp/><ref refid="include_2_particle_8_h_1a039a67a69386088763cbab97ec0c5f03" kindref="member">PartPtr</ref>;</highlight></codeline>
-<codeline lineno="171" refid="include_2_particle_8_h_1a101c54b6d6078eb4deaf9cf51db53c24" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::unordered_map&lt;unsigned<sp/>long,<sp/>PartPtr&gt;<sp/><ref refid="include_2_particle_8_h_1a101c54b6d6078eb4deaf9cf51db53c24" kindref="member">PartMap</ref>;</highlight></codeline>
-<codeline lineno="172" refid="include_2_particle_8_h_1aa1ab6cdbac1d2824f81a094ddd9466ae" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::unordered_map&lt;unsigned<sp/>long,<sp/>PartPtr&gt;::iterator<sp/><ref refid="include_2_particle_8_h_1aa1ab6cdbac1d2824f81a094ddd9466ae" kindref="member">PartMapItr</ref>;</highlight></codeline>
-<codeline lineno="173" refid="include_2_particle_8_h_1a7ce7598fd61576bce08734064841450d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::pair&lt;unsigned<sp/>long,<sp/>PartPtr&gt;<sp/><ref refid="include_2_particle_8_h_1a7ce7598fd61576bce08734064841450d" kindref="member">PMapType</ref>;</highlight></codeline>
-<codeline lineno="174" refid="include_2_particle_8_h_1ac4599e478798c941aa512cbbb24cecdc" refkind="member"><highlight class="normal">std::ostream&amp;<sp/><ref refid="include_2_particle_8_h_1ac4599e478798c941aa512cbbb24cecdc" kindref="member">operator&lt;&lt; </ref>(std::ostream&amp;<sp/>os,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="include_2_particle_8_h_1a7ce7598fd61576bce08734064841450d" kindref="member">PMapType</ref>&amp;<sp/>p);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight></codeline>
-<codeline lineno="176"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/Particle.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/include_2coef_8_h.xml b/doxyxml/include_2coef_8_h.xml
deleted file mode 100644
index 189a80f..0000000
--- a/doxyxml/include_2coef_8_h.xml
+++ /dev/null
@@ -1,113 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="include_2coef_8_h" kind="file" language="C++">
-    <compoundname>coef.H</compoundname>
-    <includedby refid="_emp_cyl_s_l_8_h" local="no">/home/weinberg/Projects/EXP/include/EmpCylSL.H</includedby>
-    <invincdepgraph>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/include/DiskModels.H</label>
-        <link refid="_disk_models_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/coef.H</label>
-        <link refid="include_2coef_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="7">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="10">
-        <label>/home/weinberg/Projects/EXP/src/MixtureBasis.H</label>
-        <link refid="_mixture_basis_8_h"/>
-      </node>
-      <node id="8">
-        <label>/home/weinberg/Projects/EXP/src/TwoCenter.H</label>
-        <link refid="_two_center_8_h"/>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/CylDisk.H</label>
-        <link refid="_cyl_disk_8_h"/>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskEval.H</label>
-        <link refid="_disk_eval_8_h"/>
-      </node>
-      <node id="12">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</label>
-        <link refid="_disk_halo_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="struct_cyl_coef_header" prot="public">CylCoefHeader</innerclass>
-    <innerclass refid="struct_sph_coef_header" prot="public">SphCoefHeader</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_coef_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_coef_H<sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="5" refid="struct_cyl_coef_header" refkind="compound"><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_cyl_coef_header" kindref="compound">CylCoefHeader</ref></highlight></codeline>
-<codeline lineno="6"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="8" refid="struct_cyl_coef_header_1a6144c2516782747a376db5ce95587620" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="struct_cyl_coef_header_1a6144c2516782747a376db5ce95587620" kindref="member">time</ref>;</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="struct_cyl_coef_header_1a9357404681d0c8f3f9195482997ca91c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_cyl_coef_header_1a9357404681d0c8f3f9195482997ca91c" kindref="member">mmax</ref>;</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="struct_cyl_coef_header_1aaa8070df4d9f25ac309343a763b8fe91" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_cyl_coef_header_1aaa8070df4d9f25ac309343a763b8fe91" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="struct_sph_coef_header" refkind="compound"><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_sph_coef_header" kindref="compound">SphCoefHeader</ref></highlight></codeline>
-<codeline lineno="19"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="20" refid="struct_sph_coef_header_1ae0ba41b9621e7033f594a26c5d37004a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordtype">id</highlight><highlight class="normal">[64];<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Force<sp/>id</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="struct_sph_coef_header_1ad13f98e01bdd4cdb46a6d4ccf047f0fb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="struct_sph_coef_header_1ad13f98e01bdd4cdb46a6d4ccf047f0fb" kindref="member">tnow</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Dump<sp/>time</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="struct_sph_coef_header_1a1ad744972d26cf7fbe3af69f86537fa9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="struct_sph_coef_header_1a1ad744972d26cf7fbe3af69f86537fa9" kindref="member">scale</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Radial<sp/>scaling</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="struct_sph_coef_header_1a3364b3d2a356c8907eaa8d7c5636bf46" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="struct_sph_coef_header_1a3364b3d2a356c8907eaa8d7c5636bf46" kindref="member">nmax</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Max<sp/>radial<sp/>order</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="struct_sph_coef_header_1a900a12efe78cd6d4e021ab15b417af1e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="struct_sph_coef_header_1a900a12efe78cd6d4e021ab15b417af1e" kindref="member">Lmax</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Max<sp/>harmonic<sp/>order</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">/*<sp/>_coef_H<sp/>*/</highlight><highlight class="preprocessor"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/coef.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/include_2exp__thread_8h.xml b/doxyxml/include_2exp__thread_8h.xml
deleted file mode 100644
index bae9a19..0000000
--- a/doxyxml/include_2exp__thread_8h.xml
+++ /dev/null
@@ -1,113 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="include_2exp__thread_8h" kind="file" language="C++">
-    <compoundname>exp_thread.h</compoundname>
-    <includes local="no">pthread.h</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/exp_thread.h</label>
-        <link refid="include_2exp__thread_8h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>pthread.h</label>
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-        <type>void</type>
-        <definition>void exp_thread_fork</definition>
-        <argsstring>(void *(*func)(void *), char *caller)</argsstring>
-        <name>exp_thread_fork</name>
-        <param>
-          <type>void *(*)(void *)</type>
-          <declname>func</declname>
-        </param>
-        <param>
-          <type>char *</type>
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-        <location file="/home/weinberg/Projects/EXP/include/exp_thread.h" line="8" column="6" declfile="/home/weinberg/Projects/EXP/include/exp_thread.h" declline="8" declcolumn="6"/>
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-        <definition>void kill_mutex</definition>
-        <argsstring>(pthread_mutex_t *m, char *caller, char *name)</argsstring>
-        <name>kill_mutex</name>
-        <param>
-          <type>pthread_mutex_t *</type>
-          <declname>m</declname>
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-        <param>
-          <type>char *</type>
-          <declname>caller</declname>
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-        <param>
-          <type>char *</type>
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-        <detaileddescription>
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-        <type>void</type>
-        <definition>void make_mutex</definition>
-        <argsstring>(pthread_mutex_t *m, char *caller, char *name)</argsstring>
-        <name>make_mutex</name>
-        <param>
-          <type>pthread_mutex_t *</type>
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-        <param>
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-<codeline lineno="1"><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined(__cplusplus)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="keyword">extern</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&quot;C&quot;</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;pthread.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8" refid="include_2exp__thread_8h_1ae48298aaec9b7e7d899fa8c845967532" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="include_2exp__thread_8h_1ae48298aaec9b7e7d899fa8c845967532" kindref="member">exp_thread_fork</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*(*func)<sp/>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>*),<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*<sp/>caller);</highlight></codeline>
-<codeline lineno="9" refid="include_2exp__thread_8h_1a2677869adef560fdfb885473e8a8862c" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="include_2exp__thread_8h_1a2677869adef560fdfb885473e8a8862c" kindref="member">make_mutex</ref>(pthread_mutex_t<sp/>*m,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*caller,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*name);</highlight></codeline>
-<codeline lineno="10" refid="include_2exp__thread_8h_1a83365789d3425fa17814ceef83c21919" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="include_2exp__thread_8h_1a83365789d3425fa17814ceef83c21919" kindref="member">kill_mutex</ref>(pthread_mutex_t<sp/>*m,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*caller,<sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*name);</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#if<sp/>defined(__cplusplus)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/exp_thread.h"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/index.xml b/doxyxml/index.xml
deleted file mode 100644
index b7a7354..0000000
--- a/doxyxml/index.xml
+++ /dev/null
@@ -1,7920 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygenindex xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="index.xsd" version="1.9.8" xml:lang="en-US">
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-          <type>const V &amp;</type>
-          <declname>xtab</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="34" column="5" declfile="/home/weinberg/Projects/EXP/include/interp.H" declline="34" declcolumn="5"/>
-        <referencedby refid="class_cyl_disk_1aa08e6a84c54e052dfe816567b1352e45" compoundref="_cyl_disk_8_h" startline="75" endline="85">CylDisk::get_dpot2</referencedby>
-        <referencedby refid="class_cyl_disk_1afe2f6caf2101d6b855548411a2d52a8a" compoundref="_cyl_disk_8_h" startline="87" endline="99">CylDisk::get_pot_dpot</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="interp_8_h_1adcc3b181410da127da013c55346dc9f8" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <templateparamlist>
-          <param>
-            <type>class V</type>
-          </param>
-        </templateparamlist>
-        <type>int</type>
-        <definition>int Vlocate_with_guard</definition>
-        <argsstring>(double value, const V &amp;vec)</argsstring>
-        <name>Vlocate_with_guard</name>
-        <param>
-          <type>double</type>
-          <declname>value</declname>
-        </param>
-        <param>
-          <type>const V &amp;</type>
-          <declname>vec</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/interp.H" line="37" column="5" declfile="/home/weinberg/Projects/EXP/include/interp.H" declline="37" declcolumn="5"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_interp_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_interp_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;deque&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8" refid="interp_8_h_1a938c7fc54525266b5939c41adda075c8" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a938c7fc54525266b5939c41adda075c8" kindref="member">Spline</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>yp1,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ypn,<sp/>Eigen::VectorXd<sp/>&amp;y2);</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;xa,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;ya,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;y2a,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>even=0);</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13" refid="interp_8_h_1ace3a2dffc3cdb3293c1c1fe492a6b862" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1ace3a2dffc3cdb3293c1c1fe492a6b862" kindref="member">Splint2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;xa,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;ya,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;y2a,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dy,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>even=0);</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="interp_8_h_1a439d7e7d21de0c0413419406a11bc403" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a439d7e7d21de0c0413419406a11bc403" kindref="member">Splint3</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;xa,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;ya,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;y2a,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dy,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dyy,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>even=0);</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="interp_8_h_1af5a16968f9dfb320a87c922db52f98cb" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1af5a16968f9dfb320a87c922db52f98cb" kindref="member">Splsum</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>y);</highlight></codeline>
-<codeline lineno="20" refid="interp_8_h_1a64f7840146f29b386763be3498786770" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1af5a16968f9dfb320a87c922db52f98cb" kindref="member">Splsum</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>y,<sp/>Eigen::VectorXd&amp;<sp/>z);</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="interp_8_h_1a5c506f65dd116f282eeb56da0f50e2e0" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a5c506f65dd116f282eeb56da0f50e2e0" kindref="member">Trapsum</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>y);</highlight></codeline>
-<codeline lineno="23" refid="interp_8_h_1a96a41d7c0f3fb83401687b95cfcd6280" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a5c506f65dd116f282eeb56da0f50e2e0" kindref="member">Trapsum</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>y,<sp/>Eigen::VectorXd&amp;<sp/>z);</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight><highlight class="comment">//<sp/>This<sp/>will<sp/>work<sp/>for<sp/>both<sp/>STL<sp/>deque<sp/>and<sp/>vector</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>V&gt;</highlight></codeline>
-<codeline lineno="28" refid="interp_8_h_1a72e302630a423bfa1c4bb0d0af8db14c" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1a72e302630a423bfa1c4bb0d0af8db14c" kindref="member">odd2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>V&amp;<sp/>xtab,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>V&amp;<sp/>ftab,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>even=0);</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>V&gt;</highlight></codeline>
-<codeline lineno="31" refid="interp_8_h_1aff85f732fb51d39630aea9fc48cf5c9d" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1aff85f732fb51d39630aea9fc48cf5c9d" kindref="member">drv2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>V&amp;<sp/>xtab,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>V&amp;<sp/>ftab,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>even=0);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>V&gt;</highlight></codeline>
-<codeline lineno="34" refid="interp_8_h_1aef43f105ecadc0dd19c4be25d0398614" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1aef43f105ecadc0dd19c4be25d0398614" kindref="member">Vlocate</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>V&amp;<sp/>xtab);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>V&gt;</highlight></codeline>
-<codeline lineno="37" refid="interp_8_h_1adcc3b181410da127da013c55346dc9f8" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="interp_8_h_1adcc3b181410da127da013c55346dc9f8" kindref="member">Vlocate_with_guard</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>value,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>V&amp;<sp/>vec);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_interp1d" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_interp1d" kindref="compound">Interp1d</ref></highlight></codeline>
-<codeline lineno="40"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="class_interp1d_1a21ea97560f42d16715c1d9c6efb2d092" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_interp1d_1a21ea97560f42d16715c1d9c6efb2d092" kindref="member">~Interp1d</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_interp1d_1acb91fcf561ac596869ce571c30cf5583" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_interp1d_1acb91fcf561ac596869ce571c30cf5583" kindref="member">eval</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="class_interp1d_1a47936fb17ab09ba1a5adae98615703f7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_interp1d_1a47936fb17ab09ba1a5adae98615703f7" kindref="member">deriv</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_interp1d_1ad7d8aaee41f1df6e533bfbb3089e8b67" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_interp1d_1ad7d8aaee41f1df6e533bfbb3089e8b67" kindref="member">xlo</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="55" refid="class_interp1d_1a7acc2957f6163115ad925d21d9ab2783" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_interp1d_1a7acc2957f6163115ad925d21d9ab2783" kindref="member">xhi</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_spline1d" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_spline1d" kindref="compound">Spline1d</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_interp1d" kindref="compound">Interp1d</ref></highlight></codeline>
-<codeline lineno="60"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight></codeline>
-<codeline lineno="63" refid="class_spline1d_1a9893d02b2d855294177889021d619a88" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>;</highlight></codeline>
-<codeline lineno="64" refid="class_spline1d_1a1d6edf52c9bd5c91e6f900184c3aa909" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_spline1d_1a1d6edf52c9bd5c91e6f900184c3aa909" kindref="member">y</ref>,<sp/><ref refid="class_spline1d_1a32a0f86bc7488946aba1db1c330d46ac" kindref="member">y2</ref>;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_spline1d_1a5bf05ae73e84bf848b8e3e65dfd9dcec" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spline1d_1a5bf05ae73e84bf848b8e3e65dfd9dcec" kindref="member">Spline1d</ref>();</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_spline1d_1aff78d6b8bfb8e3b1abf2c0de48a652a6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spline1d_1aff78d6b8bfb8e3b1abf2c0de48a652a6" kindref="member">Spline1d</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;<ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;<ref refid="class_spline1d_1a1d6edf52c9bd5c91e6f900184c3aa909" kindref="member">y</ref>,<sp/></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>d1=-1.0e30,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>d2=-1.0e30);</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76" refid="class_spline1d_1af59e1503b1dd03e2695664557e23e252" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spline1d_1af59e1503b1dd03e2695664557e23e252" kindref="member">Spline1d</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;<sp/>&amp;<ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::vector&lt;double&gt;<sp/>&amp;<ref refid="class_spline1d_1a1d6edf52c9bd5c91e6f900184c3aa909" kindref="member">y</ref>,<sp/></highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>d1=-1.0e30,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>d2=-1.0e30);</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_spline1d_1aa87545d1a3cc7a3b7b22f9239ca3f778" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spline1d" kindref="compound">Spline1d</ref><sp/>&amp;<ref refid="class_spline1d_1aa87545d1a3cc7a3b7b22f9239ca3f778" kindref="member">operator=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_spline1d" kindref="compound">Spline1d</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_spline1d_1a4af2948c59689f542ccfe1536efaf6a9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spline1d_1a4af2948c59689f542ccfe1536efaf6a9" kindref="member">~Spline1d</ref>();</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_spline1d_1acae16b27f9faccaa82f6b17701980e24" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline1d_1acae16b27f9faccaa82f6b17701980e24" kindref="member">eval</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/><ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>);</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_spline1d_1a0c75f5c5600c7acb11ccfed1bc23a584" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spline1d_1a0c75f5c5600c7acb11ccfed1bc23a584" kindref="member">eval</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/><ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>val,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/><ref refid="class_spline1d_1a27aa98f94472783eef5a68a005a79b16" kindref="member">deriv</ref>);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92" refid="class_spline1d_1a27aa98f94472783eef5a68a005a79b16" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline1d_1a27aa98f94472783eef5a68a005a79b16" kindref="member">deriv</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/><ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="class_spline1d_1a604862983923c498185d9177d2b40d99" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline1d_1a604862983923c498185d9177d2b40d99" kindref="member">xlo</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>(0);<sp/>}</highlight></codeline>
-<codeline lineno="97" refid="class_spline1d_1ae85bd74849b3023151a8b22ff9c61a72" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spline1d_1ae85bd74849b3023151a8b22ff9c61a72" kindref="member">xhi</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>(<ref refid="class_spline1d_1a9893d02b2d855294177889021d619a88" kindref="member">x</ref>.size()-1);<sp/>}</highlight></codeline>
-<codeline lineno="99"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_cheby1d" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_cheby1d" kindref="compound">Cheby1d</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_interp1d" kindref="compound">Interp1d</ref></highlight></codeline>
-<codeline lineno="103"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="class_cheby1d_1a80b6049b4f4d04a825abd72bf8c997da" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a80b6049b4f4d04a825abd72bf8c997da" kindref="member">n</ref>;</highlight></codeline>
-<codeline lineno="107" refid="class_cheby1d_1afae81d1111b8ea7f5aae3b0cab0d54fc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1afae81d1111b8ea7f5aae3b0cab0d54fc" kindref="member">a</ref>,<sp/><ref refid="class_cheby1d_1a1ec4dfe58859cca50bed5e0110ecc52b" kindref="member">b</ref>,<sp/><ref refid="class_cheby1d_1a5703f69ccf31d75a9773464995c17a95" kindref="member">xmin</ref>=0,<sp/><ref refid="class_cheby1d_1a261332af6bffe70aae0b3a329df27dc6" kindref="member">xmax</ref>=0;</highlight></codeline>
-<codeline lineno="108" refid="class_cheby1d_1a9663c4e8f89d4244cb41989537418994" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_cheby1d_1a9663c4e8f89d4244cb41989537418994" kindref="member">c</ref>;</highlight></codeline>
-<codeline lineno="109" refid="class_cheby1d_1a514dc54ba153f13915b05133caf59e46" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_cheby1d_1a514dc54ba153f13915b05133caf59e46" kindref="member">c1</ref>;</highlight></codeline>
-<codeline lineno="110" refid="class_cheby1d_1a3c045c6480b6f8015ed564916b1dd950" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_cheby1d_1a3c045c6480b6f8015ed564916b1dd950" kindref="member">c2</ref>;</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="112" refid="class_cheby1d_1a163a791fe35cc105578445849b49797c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_cheby1d_1a163a791fe35cc105578445849b49797c" kindref="member">chder</ref>(std::vector&lt;double&gt;&amp;<sp/>cin,<sp/>std::vector&lt;double&gt;&amp;<sp/>cder);</highlight></codeline>
-<codeline lineno="113" refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6" kindref="member">chebev</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>std::vector&lt;double&gt;&amp;<sp/>cin);</highlight></codeline>
-<codeline lineno="114" refid="class_cheby1d_1a2f0a0422210a51fdf4e7c5b569f0cb41" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a2f0a0422210a51fdf4e7c5b569f0cb41" kindref="member">chebint</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116" refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" kindref="member">defined</ref>;</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122" refid="class_cheby1d_1ad81f17b107f472e4e952cdec18dcfe50" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheby1d_1ad81f17b107f472e4e952cdec18dcfe50" kindref="member">Cheby1d</ref>();</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"></highlight></codeline>
-<codeline lineno="125" refid="class_cheby1d_1a036ca1cd1f34d8183d341ada7ddb9a3e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheby1d_1a036ca1cd1f34d8183d341ada7ddb9a3e" kindref="member">Cheby1d</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>B,<sp/></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129" refid="class_cheby1d_1a1a0b5dda27ddf77714119736625c72e2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheby1d_1a1a0b5dda27ddf77714119736625c72e2" kindref="member">Cheby1d</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>B,<sp/></highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;<sp/>&amp;x,<sp/>std::vector&lt;double&gt;<sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133" refid="class_cheby1d_1a05043bfe26497eb5d5652320ccfcbb8f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheby1d_1a05043bfe26497eb5d5652320ccfcbb8f" kindref="member">Cheby1d</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136" refid="class_cheby1d_1aabc443ecc751575c7245d889a4c37158" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheby1d_1aabc443ecc751575c7245d889a4c37158" kindref="member">Cheby1d</ref>(std::vector&lt;double&gt;<sp/>&amp;x,<sp/>std::vector&lt;double&gt;<sp/>&amp;y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"></highlight></codeline>
-<codeline lineno="139" refid="class_cheby1d_1a2e0a5b752a0e4c82bc15e333e2dcdc27" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheby1d" kindref="compound">Cheby1d</ref><sp/>&amp;<ref refid="class_cheby1d_1a2e0a5b752a0e4c82bc15e333e2dcdc27" kindref="member">operator=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d" kindref="compound">Cheby1d</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142" refid="class_cheby1d_1a0026d239ef7cef9a8997172a41c25b9e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_cheby1d_1a0026d239ef7cef9a8997172a41c25b9e" kindref="member">~Cheby1d</ref>();</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145" refid="class_cheby1d_1a692c77d49493eecf92a184452f032c40" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a692c77d49493eecf92a184452f032c40" kindref="member">eval</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x)</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/>{</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" kindref="member">defined</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6" kindref="member">chebev</ref>(x,<sp/><ref refid="class_cheby1d_1a9663c4e8f89d4244cb41989537418994" kindref="member">c</ref>);<sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;no<sp/>data!&quot;</highlight><highlight class="normal">);<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;}</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="149" refid="class_cheby1d_1a956231cd4074dca9c157764135ba036c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a956231cd4074dca9c157764135ba036c" kindref="member">deriv</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x)</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/>{</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" kindref="member">defined</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6" kindref="member">chebev</ref>(x,<sp/><ref refid="class_cheby1d_1a514dc54ba153f13915b05133caf59e46" kindref="member">c1</ref>);<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;no<sp/>data!&quot;</highlight><highlight class="normal">);<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;}</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight></codeline>
-<codeline lineno="153" refid="class_cheby1d_1ac7ab09acf3695f9947df7d9611b97c7b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1ac7ab09acf3695f9947df7d9611b97c7b" kindref="member">integral</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x)</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/>{</highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" kindref="member">defined</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a2f0a0422210a51fdf4e7c5b569f0cb41" kindref="member">chebint</ref>(x);<sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;no<sp/>data!&quot;</highlight><highlight class="normal">);<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;}</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"></highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>New<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="157"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_cheby1d_1a6bbb5d3a7ed5e2ddef89e8a406563584" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a6bbb5d3a7ed5e2ddef89e8a406563584" kindref="member">new_limits</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>B);</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="162" refid="class_cheby1d_1a8b43853e8403c36cbfd980c835f165e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1a8b43853e8403c36cbfd980c835f165e9" kindref="member">new_func</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>func,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>B,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165" refid="class_cheby1d_1ac6bbe27c91f9deddfe63221024f9c0a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1ac6bbe27c91f9deddfe63221024f9c0a7" kindref="member">new_data</ref>(std::vector&lt;double&gt;<sp/>&amp;X,<sp/>std::vector&lt;double&gt;<sp/>&amp;Y,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N);</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="168" refid="class_cheby1d_1ad64011d2a0b792c8cca856cdee1310ff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_cheby1d_1ad64011d2a0b792c8cca856cdee1310ff" kindref="member">eval</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>x,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>val,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/><ref refid="class_cheby1d_1a956231cd4074dca9c157764135ba036c" kindref="member">deriv</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_cheby1d_1ac2e6bc237a725d743b97c4e5dc1798c2" kindref="member">defined</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>val<sp/>=<sp/><ref refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6" kindref="member">chebev</ref>(x,<sp/><ref refid="class_cheby1d_1a9663c4e8f89d4244cb41989537418994" kindref="member">c</ref>);<sp/></highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cheby1d_1a956231cd4074dca9c157764135ba036c" kindref="member">deriv</ref><sp/>=<sp/><ref refid="class_cheby1d_1a0e4faf44856088e07a94667aec3566d6" kindref="member">chebev</ref>(x,<sp/><ref refid="class_cheby1d_1a514dc54ba153f13915b05133caf59e46" kindref="member">c1</ref>);</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>val<sp/>=<sp/><ref refid="class_cheby1d_1a956231cd4074dca9c157764135ba036c" kindref="member">deriv</ref><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_cheby1d_1aca27473704d1d17a93771ef7455f5a62" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;no<sp/>data!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"></highlight></codeline>
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-  </compounddef>
-</doxygen>
diff --git a/doxyxml/isothermal_8_h.xml b/doxyxml/isothermal_8_h.xml
deleted file mode 100644
index 8316e5f..0000000
--- a/doxyxml/isothermal_8_h.xml
+++ /dev/null
@@ -1,446 +0,0 @@
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-    <includes refid="interp_8_h" local="no">interp.H</includes>
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-        <label>interp.H</label>
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-        </childnode>
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-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/isothermal.H</label>
-        <link refid="isothermal_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
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-    <innerclass refid="class_isothermal_sphere" prot="public">IsothermalSphere</innerclass>
-    <innerclass refid="class_low_sing_isothermal_sphere" prot="public">LowSingIsothermalSphere</innerclass>
-    <innerclass refid="class_sing_isothermal_sphere" prot="public">SingIsothermalSphere</innerclass>
-    <briefdescription>
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-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="interp_8_h" kindref="compound">interp.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8" refid="class_sing_isothermal_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_sing_isothermal_sphere" kindref="compound">SingIsothermalSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="9"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="11" refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>;</highlight></codeline>
-<codeline lineno="12" refid="class_sing_isothermal_sphere_1a3f25357ec6077d41c7b64df219be72d4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a3f25357ec6077d41c7b64df219be72d4" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="13" refid="class_sing_isothermal_sphere_1abc0a760218b4d83fb09b73c7434bf239" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1abc0a760218b4d83fb09b73c7434bf239" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="14" refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" kindref="member">F</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_sing_isothermal_sphere_1a4cbfc656503d58dfc1ac24682b7fc8bb" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sing_isothermal_sphere_1a4cbfc656503d58dfc1ac24682b7fc8bb" kindref="member">SingIsothermalSphere</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>VROT<sp/>=<sp/>1.0,<sp/></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMIN<sp/>=<sp/>1.0e-6,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX<sp/>=<sp/>1.0e6)</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref><sp/>=<sp/>VROT*VROT;<sp/><ref refid="class_sing_isothermal_sphere_1a3f25357ec6077d41c7b64df219be72d4" kindref="member">rmin</ref><sp/>=<sp/>RMIN;<sp/><ref refid="class_sing_isothermal_sphere_1abc0a760218b4d83fb09b73c7434bf239" kindref="member">rmax</ref><sp/>=<sp/>RMAX;<sp/></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;SingIsothermalSphere&quot;</highlight><highlight class="normal">;<sp/></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/>=<sp/>3;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" kindref="member">F</ref><sp/>=<sp/>1.79587122125166561689e-1/(VROT*VROT*VROT);</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33" refid="class_sing_isothermal_sphere_1ab63b9164597005000c18be9c66c9e20f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1ab63b9164597005000c18be9c66c9e20f" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>*r;<sp/></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="class_sing_isothermal_sphere_1aac752fdaa2a4b6cb237e978abb78f6fa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1aac752fdaa2a4b6cb237e978abb78f6fa" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>/(4.0*M_PI*r*r);</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_sing_isothermal_sphere_1ab47f2182f44a6283f80c5e5edda7bf79" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1ab47f2182f44a6283f80c5e5edda7bf79" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>*log(r);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_sing_isothermal_sphere_1a1b9b82602ad234333438ea63c5444df1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a1b9b82602ad234333438ea63c5444df1" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>/r;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57" refid="class_sing_isothermal_sphere_1a210a5ddff4461cf1d3243a02a6478ed3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a210a5ddff4461cf1d3243a02a6478ed3" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>/(r*r);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="63" refid="class_sing_isothermal_sphere_1ad03dc3e35204f79725d280b625b1f1ad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1ad03dc3e35204f79725d280b625b1f1ad" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/>{</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/>{ur<sp/>=<sp/><ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>*log(r);<sp/>dur<sp/>=<sp/><ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>/r;}</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72" refid="class_sing_isothermal_sphere_1a5ed96a9928fd68210572d8f9c1158077" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a5ed96a9928fd68210572d8f9c1158077" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a3f25357ec6077d41c7b64df219be72d4" kindref="member">rmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="73" refid="class_sing_isothermal_sphere_1ab3da3798edc39fb2786810bff3c2666f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1ab3da3798edc39fb2786810bff3c2666f" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1abc0a760218b4d83fb09b73c7434bf239" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_sing_isothermal_sphere_1afd94754da7dbf1db3441fd7961d89193" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1afd94754da7dbf1db3441fd7961d89193" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" kindref="member">F</ref>*exp(-2.0*E/<ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>);</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79" refid="class_sing_isothermal_sphere_1a97ff5d13d58649df3b94c25a6843e091" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1a97ff5d13d58649df3b94c25a6843e091" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-2.0*<ref refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" kindref="member">F</ref>*exp(-2.0*E/<ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>)/<ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_sing_isothermal_sphere_1ad3c76b7ac6cdfb0823fe81f30c5f1d96" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1ad3c76b7ac6cdfb0823fe81f30c5f1d96" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87" refid="class_sing_isothermal_sphere_1ac5fc878db779c0051232ace9d88d987c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sing_isothermal_sphere_1ac5fc878db779c0051232ace9d88d987c" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>4.0*<ref refid="class_sing_isothermal_sphere_1a2d331f4973ee515780638d4387813675" kindref="member">F</ref>*exp(-2.0*E/<ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>)/(<ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>*<ref refid="class_sing_isothermal_sphere_1a9854de95fe111046832a968921bb893a" kindref="member">rot</ref>);</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight></codeline>
-<codeline lineno="92"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight></codeline>
-<codeline lineno="96" refid="class_isothermal_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_isothermal_sphere" kindref="compound">IsothermalSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="97"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="99" refid="class_isothermal_sphere_1a265857136526d71c663cdd43170545ab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a265857136526d71c663cdd43170545ab" kindref="member">vrot</ref>;</highlight></codeline>
-<codeline lineno="100" refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>;</highlight></codeline>
-<codeline lineno="101" refid="class_isothermal_sphere_1a1c3527100e7dc1f0217abcb9cc890b2e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a1c3527100e7dc1f0217abcb9cc890b2e" kindref="member">rscale</ref>;</highlight></codeline>
-<codeline lineno="102" refid="class_isothermal_sphere_1af615d8c36b75ddc92ffcac6b64a6860a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1af615d8c36b75ddc92ffcac6b64a6860a" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="103" refid="class_isothermal_sphere_1a5f384f8c77a3f4c6120274eea376e76c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a5f384f8c77a3f4c6120274eea376e76c" kindref="member">F</ref>;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105" refid="class_isothermal_sphere_1a8fbc1a5e700e66f8c000bacaad915037" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a8fbc1a5e700e66f8c000bacaad915037" kindref="member">num</ref>;</highlight></codeline>
-<codeline lineno="106" refid="class_isothermal_sphere_1a608175b5baa2417e56739b9278ddca3f" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a608175b5baa2417e56739b9278ddca3f" kindref="member">d</ref>,<sp/><ref refid="class_isothermal_sphere_1a3a9850b58621d4e39af7fc10ca2c069e" kindref="member">m</ref>,<sp/><ref refid="class_isothermal_sphere_1a5778200053831ed09425062e4cc381cb" kindref="member">p</ref>;</highlight></codeline>
-<codeline lineno="107" refid="class_isothermal_sphere_1a353eb15404ef0394b38f089d9bad40da" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_isothermal_sphere_1a353eb15404ef0394b38f089d9bad40da" kindref="member">d2</ref>,<sp/><ref refid="class_isothermal_sphere_1a494fc04c5b66f165bf490c642aa712fe" kindref="member">m2</ref>,<sp/><ref refid="class_isothermal_sphere_1af6693cd2abe8b4d6413dff7d1d57fe77" kindref="member">p2</ref>;</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109" refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>,<sp/><ref refid="class_isothermal_sphere_1ae5466ae6e959fb0bf9347ed2a4a4f085" kindref="member">ret2</ref>;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113" refid="class_isothermal_sphere_1a00d6d946c791757502e97be0c4587c07" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_isothermal_sphere_1a00d6d946c791757502e97be0c4587c07" kindref="member">IsothermalSphere</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RCORE<sp/>=<sp/>1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX<sp/>=<sp/>20.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>VROT<sp/>=<sp/>1.0,<sp/></highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NUM=2000,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>dN=20);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_isothermal_sphere_1a78ea7eadfc4c1a01d0165dc967cc0a17" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a78ea7eadfc4c1a01d0165dc967cc0a17" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>less<sp/>than<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a3a9850b58621d4e39af7fc10ca2c069e" kindref="member">m</ref>,<sp/><ref refid="class_isothermal_sphere_1a494fc04c5b66f165bf490c642aa712fe" kindref="member">m2</ref>,<sp/>R,<sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>;</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124" refid="class_isothermal_sphere_1afe793102d4ff196d7d891bd208716bf2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1afe793102d4ff196d7d891bd208716bf2" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>less<sp/>than<sp/>zero!&quot;</highlight><highlight class="normal">);<sp/></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a608175b5baa2417e56739b9278ddca3f" kindref="member">d</ref>,<sp/><ref refid="class_isothermal_sphere_1a353eb15404ef0394b38f089d9bad40da" kindref="member">d2</ref>,<sp/>R,<sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"></highlight></codeline>
-<codeline lineno="130" refid="class_isothermal_sphere_1a177d24c8a32acf07112b565ad250c3b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a177d24c8a32acf07112b565ad250c3b3" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>less<sp/>than<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a5778200053831ed09425062e4cc381cb" kindref="member">p</ref>,<sp/><ref refid="class_isothermal_sphere_1af6693cd2abe8b4d6413dff7d1d57fe77" kindref="member">p2</ref>,<sp/>R,<sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>;</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"></highlight></codeline>
-<codeline lineno="136" refid="class_isothermal_sphere_1a1ea525b10190a8f6123ef4364eac8561" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a1ea525b10190a8f6123ef4364eac8561" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>less<sp/>than<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R==0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a3a9850b58621d4e39af7fc10ca2c069e" kindref="member">m</ref>,<sp/><ref refid="class_isothermal_sphere_1a494fc04c5b66f165bf490c642aa712fe" kindref="member">m2</ref>,<sp/>R,<sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>/(R*R);</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="143" refid="class_isothermal_sphere_1af871c1dc6091736c1138b04868dbc8e3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1af871c1dc6091736c1138b04868dbc8e3" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>less<sp/>than<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R==0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>3.0*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>/<ref refid="class_isothermal_sphere_1a1c3527100e7dc1f0217abcb9cc890b2e" kindref="member">rscale</ref>;</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a3a9850b58621d4e39af7fc10ca2c069e" kindref="member">m</ref>,<sp/><ref refid="class_isothermal_sphere_1a494fc04c5b66f165bf490c642aa712fe" kindref="member">m2</ref>,<sp/>R,<sp/><ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a608175b5baa2417e56739b9278ddca3f" kindref="member">d</ref>,<sp/><ref refid="class_isothermal_sphere_1a353eb15404ef0394b38f089d9bad40da" kindref="member">d2</ref>,<sp/>R,<sp/><ref refid="class_isothermal_sphere_1ae5466ae6e959fb0bf9347ed2a4a4f085" kindref="member">ret2</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-2.0*<ref refid="class_isothermal_sphere_1a072e551120d37f3e021e0b716821d912" kindref="member">ret1</ref>/(R*R*R)<sp/>+<sp/>4.0*M_PI*<ref refid="class_isothermal_sphere_1ae5466ae6e959fb0bf9347ed2a4a4f085" kindref="member">ret2</ref>;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="151" refid="class_isothermal_sphere_1a0a79504dca46958d47c045e4b01339c0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a0a79504dca46958d47c045e4b01339c0" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/>{</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>less<sp/>than<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R==0)</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>ur<sp/>=<sp/>dur<sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a5778200053831ed09425062e4cc381cb" kindref="member">p</ref>,<sp/><ref refid="class_isothermal_sphere_1af6693cd2abe8b4d6413dff7d1d57fe77" kindref="member">p2</ref>,<sp/>R,<sp/>ur,<sp/>1);</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_isothermal_sphere_1a9bfa16825ca336784439552d4fc038c4" kindref="member">r</ref>,<sp/><ref refid="class_isothermal_sphere_1a3a9850b58621d4e39af7fc10ca2c069e" kindref="member">m</ref>,<sp/><ref refid="class_isothermal_sphere_1a494fc04c5b66f165bf490c642aa712fe" kindref="member">m2</ref>,<sp/>R,<sp/>dur,<sp/>1);</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dur<sp/>*=<sp/>1.0/(R*R);</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="164" refid="class_isothermal_sphere_1ab1fa18d2066d809e3ca45eee0fb94485" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1ab1fa18d2066d809e3ca45eee0fb94485" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="165" refid="class_isothermal_sphere_1a5fa33dbd4ec458aae917cb522ca57ffd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a5fa33dbd4ec458aae917cb522ca57ffd" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1af615d8c36b75ddc92ffcac6b64a6860a" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"></highlight></codeline>
-<codeline lineno="167" refid="class_isothermal_sphere_1ae0764c0fdda5b13b0a467339f6f189a8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1ae0764c0fdda5b13b0a467339f6f189a8" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a5f384f8c77a3f4c6120274eea376e76c" kindref="member">F</ref>*exp(-E/(<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>));</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"></highlight></codeline>
-<codeline lineno="171" refid="class_isothermal_sphere_1abcf99debec7ff8651cfba1628611e933" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1abcf99debec7ff8651cfba1628611e933" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_isothermal_sphere_1a5f384f8c77a3f4c6120274eea376e76c" kindref="member">F</ref>*exp(-E/<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>)/(<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>);</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"></highlight></codeline>
-<codeline lineno="175" refid="class_isothermal_sphere_1a8ec1b9225e5ee21cde358474621cb008" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a8ec1b9225e5ee21cde358474621cb008" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"></highlight></codeline>
-<codeline lineno="179" refid="class_isothermal_sphere_1adc9e5be518e3585264380e6f22df735e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1adc9e5be518e3585264380e6f22df735e" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_sphere_1a5f384f8c77a3f4c6120274eea376e76c" kindref="member">F</ref>*exp(-E/(<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>))/(<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>*<ref refid="class_isothermal_sphere_1a5e2a0e06ec4ff6d46b31fd7f305dfddf" kindref="member">sigma</ref>);</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"></highlight></codeline>
-<codeline lineno="183"><highlight class="normal"></highlight></codeline>
-<codeline lineno="184"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"></highlight></codeline>
-<codeline lineno="186"><highlight class="normal"></highlight></codeline>
-<codeline lineno="187" refid="class_low_sing_isothermal_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_low_sing_isothermal_sphere" kindref="compound">LowSingIsothermalSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="188"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="190" refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="191" refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="192" refid="class_low_sing_isothermal_sphere_1a0a37ae779bd4afb91041ed724f2049b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a0a37ae779bd4afb91041ed724f2049b3" kindref="member">F</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a8b8b5ab900e6b8b772363e5b541ad9af" kindref="member">Fconst</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>;</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194" refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>;</highlight></codeline>
-<codeline lineno="195" refid="class_low_sing_isothermal_sphere_1ade36ef051d539d8b99a726bb69cbf32d" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ade36ef051d539d8b99a726bb69cbf32d" kindref="member">d</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" kindref="member">p</ref>;</highlight></codeline>
-<codeline lineno="196" refid="class_low_sing_isothermal_sphere_1a7bcd266bea840a5438c388ef56c212c1" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_low_sing_isothermal_sphere_1a7bcd266bea840a5438c388ef56c212c1" kindref="member">d2</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ae7d9269e8b0187bbfdde1a90e49a15aa" kindref="member">m2</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ab6bfbd1f4707749f1521de2edf8db8bc" kindref="member">p2</ref>;</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"></highlight></codeline>
-<codeline lineno="198" refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a309daac810b8996c2e937a8e40d4ac50" kindref="member">ret2</ref>;</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"></highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"></highlight></codeline>
-<codeline lineno="202" refid="class_low_sing_isothermal_sphere_1aa6cdc3d24427b03a73bb12c7744dd1d2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_low_sing_isothermal_sphere_1aa6cdc3d24427b03a73bb12c7744dd1d2" kindref="member">LowSingIsothermalSphere</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMIN<sp/>=<sp/>1.0e-3,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX<sp/>=<sp/>20.0,<sp/></highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NUM=2000,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>dN=20);</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal"></highlight></codeline>
-<codeline lineno="207" refid="class_low_sing_isothermal_sphere_1aff60f7adc80bced5775c6d240c5635fb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1aff60f7adc80bced5775c6d240c5635fb" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>[1]*R/<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;=<ref refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" kindref="member">rmax</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>];</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ae7d9269e8b0187bbfdde1a90e49a15aa" kindref="member">m2</ref>,<sp/>log(R),<sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>;</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"></highlight></codeline>
-<codeline lineno="215" refid="class_low_sing_isothermal_sphere_1ac94bde3f7edb32ee62a1d285f7bba249" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1ac94bde3f7edb32ee62a1d285f7bba249" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);<sp/></highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1ade36ef051d539d8b99a726bb69cbf32d" kindref="member">d</ref>[1]*<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>*<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>/(R*R);</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;=<ref refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" kindref="member">rmax</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ade36ef051d539d8b99a726bb69cbf32d" kindref="member">d</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a7bcd266bea840a5438c388ef56c212c1" kindref="member">d2</ref>,<sp/>log(R),<sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>;</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"></highlight></codeline>
-<codeline lineno="223" refid="class_low_sing_isothermal_sphere_1a581e5085c4464562c63ee2193a050fe4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a581e5085c4464562c63ee2193a050fe4" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>[1]*log(R)/log(<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>);</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;=<ref refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" kindref="member">rmax</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>]/R;</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" kindref="member">p</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ab6bfbd1f4707749f1521de2edf8db8bc" kindref="member">p2</ref>,<sp/>log(R),<sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>;</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="231" refid="class_low_sing_isothermal_sphere_1ac05e510eecb71c632b823c60f7a2f247" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1ac05e510eecb71c632b823c60f7a2f247" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>[1]/(R*log(<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>));</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;=<ref refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" kindref="member">rmax</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>]/(R*R);</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ae7d9269e8b0187bbfdde1a90e49a15aa" kindref="member">m2</ref>,<sp/>log(R),<sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>/(R*R);</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="238"><highlight class="normal"></highlight></codeline>
-<codeline lineno="239" refid="class_low_sing_isothermal_sphere_1a6a44dfbfa2ad5937b6cfe5a068b68fc8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a6a44dfbfa2ad5937b6cfe5a068b68fc8" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R)<sp/>{</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>[1]/(R*R*log(<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>));</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;=<ref refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" kindref="member">rmax</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-2.0*<ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>]/(R*R*R);</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ae7d9269e8b0187bbfdde1a90e49a15aa" kindref="member">m2</ref>,<sp/>log(R),<sp/><ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ade36ef051d539d8b99a726bb69cbf32d" kindref="member">d</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a7bcd266bea840a5438c388ef56c212c1" kindref="member">d2</ref>,<sp/>log(R),<sp/><ref refid="class_low_sing_isothermal_sphere_1a309daac810b8996c2e937a8e40d4ac50" kindref="member">ret2</ref>,<sp/>1);</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-2.0*<ref refid="class_low_sing_isothermal_sphere_1aca59b33049f9961f24b9ee6cb0a6727b" kindref="member">ret1</ref>/(R*R)<sp/>+<sp/>4.0*M_PI*<ref refid="class_low_sing_isothermal_sphere_1a309daac810b8996c2e937a8e40d4ac50" kindref="member">ret2</ref>;</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="248" refid="class_low_sing_isothermal_sphere_1a044e953df452522efe8975ef73b7cbdc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a044e953df452522efe8975ef73b7cbdc" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/>{</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;0.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&lt;=<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>ur<sp/>=<sp/><ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>[1]*log(R)/log(<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>);</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dur<sp/>=<sp/><ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>[1]/(R*log(<ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>));</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(R&gt;=<ref refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" kindref="member">rmax</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>ur<sp/>=<sp/>-<ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>]/R;</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dur<sp/>=<sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>]/(R*R);</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" kindref="member">p</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ab6bfbd1f4707749f1521de2edf8db8bc" kindref="member">p2</ref>,<sp/>log(R),<sp/>ur,<sp/>1);</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="interp_8_h_1a03897bf7c41f3d4d06a460ad71230bb5" kindref="member">Splint1</ref>(<ref refid="class_low_sing_isothermal_sphere_1a9c0d4b52e2496c073104df683290757f" kindref="member">u</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1a91e77aab1cc304abeed0d2c56cbf6403" kindref="member">m</ref>,<sp/><ref refid="class_low_sing_isothermal_sphere_1ae7d9269e8b0187bbfdde1a90e49a15aa" kindref="member">m2</ref>,<sp/>log(R),<sp/>dur,<sp/>1);</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>dur<sp/>*=<sp/>1.0/(R*R);</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="264"><highlight class="normal"></highlight></codeline>
-<codeline lineno="265" refid="class_low_sing_isothermal_sphere_1adb2287d0df5a238e324d9697d846648a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1adb2287d0df5a238e324d9697d846648a" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a5f2be78e2fb95e31d77074949303522d" kindref="member">rmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="266" refid="class_low_sing_isothermal_sphere_1ad6e9b8b2ee733f25bf759d57da386dfe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1ad6e9b8b2ee733f25bf759d57da386dfe" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1ac7344706557d0ff962c02a78cec53f31" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="267"><highlight class="normal"></highlight></codeline>
-<codeline lineno="268" refid="class_low_sing_isothermal_sphere_1a4082a586708bfbefb556cd02bee440a9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a4082a586708bfbefb556cd02bee440a9" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(E&gt;<ref refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" kindref="member">p</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>])<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a0a37ae779bd4afb91041ed724f2049b3" kindref="member">F</ref>*exp(-E/(<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>*<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>))<sp/>-<sp/><ref refid="class_low_sing_isothermal_sphere_1a8b8b5ab900e6b8b772363e5b541ad9af" kindref="member">Fconst</ref>;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"></highlight></codeline>
-<codeline lineno="273" refid="class_low_sing_isothermal_sphere_1a93a717a75f264777a890d018fd18b28a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a93a717a75f264777a890d018fd18b28a" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(E&gt;<ref refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" kindref="member">p</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>])<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_low_sing_isothermal_sphere_1a0a37ae779bd4afb91041ed724f2049b3" kindref="member">F</ref>*exp(-E/<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>*<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>)/(<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>*<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>);</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"></highlight></codeline>
-<codeline lineno="278" refid="class_low_sing_isothermal_sphere_1a556cd0c2804409b83bf4e442430557e5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a556cd0c2804409b83bf4e442430557e5" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"></highlight></codeline>
-<codeline lineno="282" refid="class_low_sing_isothermal_sphere_1affdda80cc52d7003310844594cb4a376" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1affdda80cc52d7003310844594cb4a376" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(E&gt;<ref refid="class_low_sing_isothermal_sphere_1aa09b6c0967939d854c94585c4e687eba" kindref="member">p</ref>[<ref refid="class_low_sing_isothermal_sphere_1a3470b8b6b8616c5e6171b5f33c39134f" kindref="member">num</ref>])<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_low_sing_isothermal_sphere_1a0a37ae779bd4afb91041ed724f2049b3" kindref="member">F</ref>*exp(-E/(<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>*<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>))/(<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>*<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>*<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>*<ref refid="class_low_sing_isothermal_sphere_1ad96a878a58905857df5ae30f54155b16" kindref="member">sigma</ref>);</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"></highlight></codeline>
-<codeline lineno="287"><highlight class="normal"></highlight></codeline>
-<codeline lineno="288"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"></highlight></codeline>
-<codeline lineno="290"><highlight class="normal"></highlight></codeline>
-<codeline lineno="291"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/isothermal.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/kalnajs_8_h.xml b/doxyxml/kalnajs_8_h.xml
deleted file mode 100644
index 7f5b45b..0000000
--- a/doxyxml/kalnajs_8_h.xml
+++ /dev/null
@@ -1,133 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="kalnajs_8_h" kind="file" language="C++">
-    <compoundname>kalnajs.H</compoundname>
-    <innerclass refid="class_kalnajs_disk" prot="public">KalnajsDisk</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_kalnajs.H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_kalnajs.H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4" refid="class_kalnajs_disk" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_kalnajs_disk" kindref="compound">KalnajsDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="5"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="7"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="8" refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="9" refid="class_kalnajs_disk_1a5d776ada61166f6ce190549d9f10694d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a5d776ada61166f6ce190549d9f10694d" kindref="member">mmax</ref>;</highlight></codeline>
-<codeline lineno="10" refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" kindref="member">rhofac</ref>;</highlight></codeline>
-<codeline lineno="11" refid="class_kalnajs_disk_1aa8da2e309c77a3f504528b8ab698913b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1aa8da2e309c77a3f504528b8ab698913b" kindref="member">potfac1</ref>,<sp/><ref refid="class_kalnajs_disk_1ad5ae7d1446552f20b54efa3f3f5f8548" kindref="member">potfac2</ref>;</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13" refid="class_kalnajs_disk_1a7e688891aedf03bf19183f303b2ae3cd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a7e688891aedf03bf19183f303b2ae3cd" kindref="member">omega0</ref>;</highlight></codeline>
-<codeline lineno="14" refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>;</highlight></codeline>
-<codeline lineno="15" refid="class_kalnajs_disk_1a4e3dd7cc483d7fe9f23da0cd1321d6a4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ad8240d5ee622ba36ad5188cd9e7c301d" kindref="member">fac0</ref>,<sp/><ref refid="class_kalnajs_disk_1a4e3dd7cc483d7fe9f23da0cd1321d6a4" kindref="member">F</ref>;</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_kalnajs_disk_1a10fb32ac5e5cdee537053e36352f5c23" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_kalnajs_disk_1a10fb32ac5e5cdee537053e36352f5c23" kindref="member">KalnajsDisk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMOD=1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>MASS=1.0)</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref><sp/>=<sp/>RMOD;<sp/><ref refid="class_kalnajs_disk_1a5d776ada61166f6ce190549d9f10694d" kindref="member">mmax</ref><sp/>=<sp/>MASS;<sp/></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" kindref="member">rhofac</ref><sp/>=<sp/><ref refid="class_kalnajs_disk_1a5d776ada61166f6ce190549d9f10694d" kindref="member">mmax</ref>/(2.0*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>*M_PI/3.0);</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_kalnajs_disk_1aa8da2e309c77a3f504528b8ab698913b" kindref="member">potfac1</ref><sp/>=<sp/>0.5*M_PI*M_PI*<ref refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" kindref="member">rhofac</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_kalnajs_disk_1ad5ae7d1446552f20b54efa3f3f5f8548" kindref="member">potfac2</ref><sp/>=<sp/>0.5*M_PI*<ref refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" kindref="member">rhofac</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref>=2;<sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;KalnajsDisk&quot;</highlight><highlight class="normal">;<sp/></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_kalnajs_disk_1ad16a172ee5c0052f3f235dcac7d55182" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ad16a172ee5c0052f3f235dcac7d55182" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a5d776ada61166f6ce190549d9f10694d" kindref="member">mmax</ref>;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a5d776ada61166f6ce190549d9f10694d" kindref="member">mmax</ref>*(1.0<sp/>-<sp/>pow(1.0<sp/>-<sp/>r*r/(<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>),<sp/>1.5));</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="37" refid="class_kalnajs_disk_1af9e308c45eddcd955bab20c75acdf9e1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1af9e308c45eddcd955bab20c75acdf9e1" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" kindref="member">rhofac</ref>*sqrt((1.0<sp/>-<sp/>r*r/(<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>)));</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_kalnajs_disk_1ac1869a314564a3955b736bb0ab9fd1cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ac1869a314564a3955b736bb0ab9fd1cf" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x<sp/>=<sp/>r/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x&gt;1.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ad5ae7d1446552f20b54efa3f3f5f8548" kindref="member">potfac2</ref>*((x*x-2.0)*asin(1.0/x)<sp/>-<sp/>sqrt(x*x<sp/>-<sp/>1.0));</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1aa8da2e309c77a3f504528b8ab698913b" kindref="member">potfac1</ref>*(0.5*x*x<sp/>-<sp/>1.0);</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_kalnajs_disk_1aede267d36a3f29d96c109e14b40baf5e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1aede267d36a3f29d96c109e14b40baf5e" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x<sp/>=<sp/>r/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x&gt;1.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ad5ae7d1446552f20b54efa3f3f5f8548" kindref="member">potfac2</ref>*2.0*(sqrt(x*x<sp/>-<sp/>1.0)/r<sp/>-<sp/>x*asin(1.0/x)/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>);</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1aa8da2e309c77a3f504528b8ab698913b" kindref="member">potfac1</ref>*x/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_kalnajs_disk_1ac247a5c2512d480d32dc9edce8e67dcc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ac247a5c2512d480d32dc9edce8e67dcc" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x<sp/>=<sp/>r/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x&gt;1.0)<sp/><ref refid="class_kalnajs_disk_1ad5ae7d1446552f20b54efa3f3f5f8548" kindref="member">potfac2</ref>*2.0*(2.0/(sqrt(x*x<sp/>-<sp/>1.0)*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>)<sp/>-<sp/></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>asin(1.0/x)/(<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>)<sp/>-</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sqrt(x*x<sp/>-<sp/>1.0)/(r*r)<sp/>);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1aa8da2e309c77a3f504528b8ab698913b" kindref="member">potfac1</ref>/(<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>);</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="62" refid="class_kalnajs_disk_1abb79244cac4ef4634d1985fbdff9d101" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1abb79244cac4ef4634d1985fbdff9d101" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/>{</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x<sp/>=<sp/>r/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(x&gt;1.0)<sp/><sp/>{ur<sp/>=<sp/><ref refid="class_kalnajs_disk_1ad5ae7d1446552f20b54efa3f3f5f8548" kindref="member">potfac2</ref>*((x*x-2.0)*asin(1.0/x)<sp/>-<sp/>sqrt(x*x<sp/>-<sp/>1.0));</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/>dur<sp/>=<sp/><ref refid="class_kalnajs_disk_1ad5ae7d1446552f20b54efa3f3f5f8548" kindref="member">potfac2</ref>*2.0*(sqrt(x*x<sp/>-<sp/>1.0)/r<sp/>-<sp/>x*asin(1.0/x)/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>);}</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{ur<sp/>=<sp/><ref refid="class_kalnajs_disk_1aa8da2e309c77a3f504528b8ab698913b" kindref="member">potfac1</ref>*(0.5*x*x<sp/>-<sp/>1.0);<sp/>dur<sp/>=<sp/><ref refid="class_kalnajs_disk_1aa8da2e309c77a3f504528b8ab698913b" kindref="member">potfac1</ref>*x/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;}</highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_kalnajs_disk_1a854b5373887ca6372f5aab5c3a7a2271" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a854b5373887ca6372f5aab5c3a7a2271" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="72" refid="class_kalnajs_disk_1ad479c3dde29768e0455756a8dbc75af8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ad479c3dde29768e0455756a8dbc75af8" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_kalnajs_disk_1a80de707425a8a22662e9c2607c4c8d59" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a80de707425a8a22662e9c2607c4c8d59" kindref="member">setup_df</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>frac)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fabs(frac)&gt;=1.0)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;|frac|<sp/>must<sp/>less<sp/>than<sp/>1&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_kalnajs_disk_1a7e688891aedf03bf19183f303b2ae3cd" kindref="member">omega0</ref><sp/>=<sp/>sqrt(0.5*M_PI*M_PI*<ref refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" kindref="member">rhofac</ref>/<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>);</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref><sp/><sp/>=<sp/><ref refid="class_kalnajs_disk_1a7e688891aedf03bf19183f303b2ae3cd" kindref="member">omega0</ref>*frac;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_kalnajs_disk_1ad8240d5ee622ba36ad5188cd9e7c301d" kindref="member">fac0</ref><sp/>=<sp/>(<ref refid="class_kalnajs_disk_1a7e688891aedf03bf19183f303b2ae3cd" kindref="member">omega0</ref>*<ref refid="class_kalnajs_disk_1a7e688891aedf03bf19183f303b2ae3cd" kindref="member">omega0</ref>-<ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>*<ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>)*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>*<ref refid="class_kalnajs_disk_1a1a0010358c7c9b516d98cfd25bad5739" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_kalnajs_disk_1a4e3dd7cc483d7fe9f23da0cd1321d6a4" kindref="member">F</ref><sp/>=<sp/><ref refid="class_kalnajs_disk_1a434c804c330a489129abd255d380be2e" kindref="member">rhofac</ref>/(2.0*M_PI*sqrt(<ref refid="class_kalnajs_disk_1ad8240d5ee622ba36ad5188cd9e7c301d" kindref="member">fac0</ref>));</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_kalnajs_disk_1aa0726247bdb0054255539dac7bbd356a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1aa0726247bdb0054255539dac7bbd356a" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>test<sp/>=<sp/><ref refid="class_kalnajs_disk_1ad8240d5ee622ba36ad5188cd9e7c301d" kindref="member">fac0</ref><sp/>+<sp/>2.0*(E<sp/>+<sp/><ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>*L);</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(test&gt;0.0)</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a4e3dd7cc483d7fe9f23da0cd1321d6a4" kindref="member">F</ref>/sqrt(test);</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_kalnajs_disk_1a4605aeab2bff2803242acba3607c9e38" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a4605aeab2bff2803242acba3607c9e38" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>test<sp/>=<sp/><ref refid="class_kalnajs_disk_1ad8240d5ee622ba36ad5188cd9e7c301d" kindref="member">fac0</ref><sp/>+<sp/>2.0*(E<sp/>+<sp/><ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>*L);</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(test&gt;0.0)</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_kalnajs_disk_1a4e3dd7cc483d7fe9f23da0cd1321d6a4" kindref="member">F</ref>/(test*sqrt(test));</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_kalnajs_disk_1ae0b53dce888384877071a3eb958c2916" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1ae0b53dce888384877071a3eb958c2916" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>test<sp/>=<sp/><ref refid="class_kalnajs_disk_1ad8240d5ee622ba36ad5188cd9e7c301d" kindref="member">fac0</ref><sp/>+<sp/>2.0*(E<sp/>+<sp/><ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>*L);</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(test&gt;0.0)</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_kalnajs_disk_1a4e3dd7cc483d7fe9f23da0cd1321d6a4" kindref="member">F</ref>*<ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>/(test*sqrt(test));</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107" refid="class_kalnajs_disk_1a21d0318df2a17a316a1ed47e5d0a3a85" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_kalnajs_disk_1a21d0318df2a17a316a1ed47e5d0a3a85" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>test<sp/>=<sp/><ref refid="class_kalnajs_disk_1ad8240d5ee622ba36ad5188cd9e7c301d" kindref="member">fac0</ref><sp/>+<sp/>2.0*(E<sp/>+<sp/><ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>*L);</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(test&gt;0.0)</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>3.0*<ref refid="class_kalnajs_disk_1a4e3dd7cc483d7fe9f23da0cd1321d6a4" kindref="member">F</ref>*<ref refid="class_kalnajs_disk_1ab008b4e339eb32f86a6b0ef8b803e46d" kindref="member">omega</ref>/(test*test*sqrt(test));</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="113"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="115"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/kalnajs.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/king_8_h.xml b/doxyxml/king_8_h.xml
deleted file mode 100644
index 4febb01..0000000
--- a/doxyxml/king_8_h.xml
+++ /dev/null
@@ -1,178 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="king_8_h" kind="file" language="C++">
-    <compoundname>king.H</compoundname>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
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-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
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-        <link refid="_monot_cubic_interpolator_8_h"/>
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-        <link refid="gauss_q_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
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-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
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-        <label>/home/weinberg/Projects/EXP/include/king.H</label>
-        <link refid="king_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
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-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
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-        </childnode>
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-        </childnode>
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-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="18">
-        <label>cstdlib</label>
-      </node>
-      <node id="8">
-        <label>deque</label>
-      </node>
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-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
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-        <label>iostream</label>
-      </node>
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-      <node id="3">
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-      </node>
-    </incdepgraph>
-    <innerclass refid="class_king_sphere" prot="public">KingSphere</innerclass>
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-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6" refid="class_king_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_king_sphere" kindref="compound">KingSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref></highlight></codeline>
-<codeline lineno="7"><highlight class="normal">{</highlight></codeline>
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-<codeline lineno="9" refid="class_king_sphere_1ae065ee37ee4cebb8001fe59cdc8aa0d2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_king_sphere_1ae065ee37ee4cebb8001fe59cdc8aa0d2" kindref="member">kingK</ref>;</highlight></codeline>
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-<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_spherical_model_table_1a1b4626374991cd7f54ef456ce332bdf0" kindref="member">get_num_param</ref>()&lt;5)<sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;wrong<sp/>number<sp/>of<sp/>parameters&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_king_sphere_1ae065ee37ee4cebb8001fe59cdc8aa0d2" kindref="member">kingK</ref><sp/>=<sp/><ref refid="class_spherical_model_table_1ac4c388ba456e4c438acbefef584d7812" kindref="member">get_param</ref>(2)*exp(-<ref refid="class_spherical_model_table_1ac4c388ba456e4c438acbefef584d7812" kindref="member">get_param</ref>(1));</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_king_sphere_1a82b00f644f8a3b375b783cfd97c3f289" kindref="member">betaK</ref><sp/>=<sp/>-2.0*<ref refid="class_spherical_model_table_1ac4c388ba456e4c438acbefef584d7812" kindref="member">get_param</ref>(3);</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_king_sphere_1a1f96351f8f8d3f3afdd464d27b4ecd43" kindref="member">E0K</ref><sp/>=<sp/>-<ref refid="class_spherical_model_table_1ac4c388ba456e4c438acbefef584d7812" kindref="member">get_param</ref>(4)/<ref refid="class_spherical_model_table_1ac4c388ba456e4c438acbefef584d7812" kindref="member">get_param</ref>(5);</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="24" refid="class_king_sphere_1ae981250fa1763ce5fb8ca72651f509fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_king_sphere_1ae981250fa1763ce5fb8ca72651f509fd" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_king_sphere_1ae065ee37ee4cebb8001fe59cdc8aa0d2" kindref="member">kingK</ref>*(exp(<ref refid="class_king_sphere_1a82b00f644f8a3b375b783cfd97c3f289" kindref="member">betaK</ref>*(E-<ref refid="class_king_sphere_1a1f96351f8f8d3f3afdd464d27b4ecd43" kindref="member">E0K</ref>))<sp/>-<sp/>1.0);<sp/>}</highlight></codeline>
-<codeline lineno="25" refid="class_king_sphere_1af1471186410f1902c5840ba4035346a2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_king_sphere_1af1471186410f1902c5840ba4035346a2" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_king_sphere_1a82b00f644f8a3b375b783cfd97c3f289" kindref="member">betaK</ref>*<ref refid="class_king_sphere_1ae065ee37ee4cebb8001fe59cdc8aa0d2" kindref="member">kingK</ref>*exp(<ref refid="class_king_sphere_1a82b00f644f8a3b375b783cfd97c3f289" kindref="member">betaK</ref>*(E-<ref refid="class_king_sphere_1a1f96351f8f8d3f3afdd464d27b4ecd43" kindref="member">E0K</ref>));<sp/>}</highlight></codeline>
-<codeline lineno="26" refid="class_king_sphere_1ad89ab099c359f76e7e65b9202c714aa2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_king_sphere_1ad89ab099c359f76e7e65b9202c714aa2" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_king_sphere_1a82b00f644f8a3b375b783cfd97c3f289" kindref="member">betaK</ref>*<ref refid="class_king_sphere_1a82b00f644f8a3b375b783cfd97c3f289" kindref="member">betaK</ref>*<ref refid="class_king_sphere_1ae065ee37ee4cebb8001fe59cdc8aa0d2" kindref="member">kingK</ref>*exp(<ref refid="class_king_sphere_1a82b00f644f8a3b375b783cfd97c3f289" kindref="member">betaK</ref>*(E-<ref refid="class_king_sphere_1a1f96351f8f8d3f3afdd464d27b4ecd43" kindref="member">E0K</ref>));<sp/>}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/king.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/largest_8_h.xml b/doxyxml/largest_8_h.xml
deleted file mode 100644
index 1fd45c0..0000000
--- a/doxyxml/largest_8_h.xml
+++ /dev/null
@@ -1,76 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="largest_8_h" kind="file" language="C++">
-    <compoundname>largest.H</compoundname>
-    <includes local="no">queue</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/Analysis/largest.H</label>
-        <link refid="largest_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>queue</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="classlargest_values" prot="public">largestValues</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_largest_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_largest_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;queue&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Encapsulate<sp/>a<sp/>priority<sp/>queue<sp/>for<sp/>maximum<sp/>value<sp/>list</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">template</highlight><highlight class="normal"><sp/>&lt;</highlight><highlight class="keyword">class</highlight><highlight class="normal"><sp/>U&gt;</highlight></codeline>
-<codeline lineno="9" refid="classlargest_values" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classlargest_values" kindref="compound">largestValues</ref></highlight></codeline>
-<codeline lineno="10"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14" refid="classlargest_values_1a41a76e5a53d653d25a2ef560fc5497b7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classlargest_values_1a41a76e5a53d653d25a2ef560fc5497b7" kindref="member">largestValues</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>size)<sp/>:<sp/><ref refid="classlargest_values_1aa281b8f0458b01c2e8d77c995baffb46" kindref="member">maxSize</ref>(size)<sp/>{}</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="classlargest_values_1a0464850f712edff25999b530d77c429f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classlargest_values_1a0464850f712edff25999b530d77c429f" kindref="member">operator()</ref>(U<sp/>data)</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>.size()&lt;<ref refid="classlargest_values_1aa281b8f0458b01c2e8d77c995baffb46" kindref="member">maxSize</ref>)<sp/>{</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>.push(data);</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(data.val<sp/>&gt;<sp/><ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>.top().val)<sp/>{</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>.pop();<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Get<sp/>rid<sp/>of<sp/>the<sp/>root</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>.push(data);<sp/></highlight><highlight class="comment">//<sp/>Priority<sp/>queue<sp/>will<sp/>automatically<sp/>restructure</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="classlargest_values_1a662b1f515af03b151f90623cabfe567e" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;U&gt;<sp/><ref refid="classlargest_values_1a662b1f515af03b151f90623cabfe567e" kindref="member">getValues</ref>()</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;U&gt;<sp/>ret;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Make<sp/>a<sp/>return<sp/>vector</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>cq<sp/>=<sp/><ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Copy<sp/>the<sp/>queue</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal">(cq.size()!=0)<sp/>{<sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Keep<sp/>going<sp/>until<sp/>empty</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>ret.push_back(cq.top());<sp/><sp/></highlight><highlight class="comment">//<sp/>Push<sp/>back<sp/>the<sp/>root<sp/>element</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>cq.pop();<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Remove<sp/>the<sp/>root<sp/>element</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Return<sp/>the<sp/>vector</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43" refid="classlargest_values_1a270980481483b26273f3ce69fa9c62f0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classlargest_values_1a270980481483b26273f3ce69fa9c62f0" kindref="member">clear</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">while</highlight><highlight class="normal">(<ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>.size()!=0)<sp/><ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>.pop();</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" refkind="member"><highlight class="normal"><sp/><sp/>std::priority_queue&lt;U,<sp/>std::vector&lt;U&gt;,<sp/>std::greater&lt;U&gt;&gt;<sp/><ref refid="classlargest_values_1a415295691baa182aff9819d24c0622a0" kindref="member">pq</ref>;</highlight></codeline>
-<codeline lineno="50" refid="classlargest_values_1aa281b8f0458b01c2e8d77c995baffb46" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="classlargest_values_1aa281b8f0458b01c2e8d77c995baffb46" kindref="member">maxSize</ref>;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/largest.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/libvars_8_h.xml b/doxyxml/libvars_8_h.xml
deleted file mode 100644
index 54e8a29..0000000
--- a/doxyxml/libvars_8_h.xml
+++ /dev/null
@@ -1,357 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="libvars_8_h" kind="file" language="C++">
-    <compoundname>libvars.H</compoundname>
-    <includes local="no">random</includes>
-    <includes local="no">mpi.h</includes>
-    <includedby refid="_e_x_p_exception_8_h" local="no">/home/weinberg/Projects/EXP/include/EXPException.H</includedby>
-    <includedby refid="_emp_cyl_s_l_8_h" local="no">/home/weinberg/Projects/EXP/include/EmpCylSL.H</includedby>
-    <includedby refid="_s_l_grid_m_p2_8_h" local="no">/home/weinberg/Projects/EXP/include/SLGridMP2.H</includedby>
-    <includedby refid="global_8_h" local="no">/home/weinberg/Projects/EXP/src/global.H</includedby>
-    <includedby refid="_disk2d_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/Disk2dHalo.H</includedby>
-    <includedby refid="_disk_halo_8_h" local="no">/home/weinberg/Projects/EXP/utils/ICs/DiskHalo.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/libvars.H</label>
-        <link refid="libvars_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>mpi.h</label>
-      </node>
-      <node id="2">
-        <label>random</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="31">
-        <label>/home/weinberg/Projects/EXP/include/DiskModels.H</label>
-        <link refid="_disk_models_8_h"/>
-        <childnode refid="32" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/EXPException.H</label>
-        <link refid="_e_x_p_exception_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
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-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="30">
-        <label>/home/weinberg/Projects/EXP/include/EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="31" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="33" relation="include">
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-        </childnode>
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-      <node id="35">
-        <label>/home/weinberg/Projects/EXP/include/SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
-        <childnode refid="30" relation="include">
-        </childnode>
-        <childnode refid="36" relation="include">
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-        <label>/home/weinberg/Projects/EXP/include/libvars.H</label>
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-<codeline lineno="27"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">for</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n=0;<sp/>n&lt;<ref refid="localmpi_8_h_1a31bfe068640b411bea3df0d69177ded5" kindref="member">numprocs</ref>;<sp/>n++)<sp/>{</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/>MPI_Barrier(MPI_COMM_WORLD);</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(n==<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>)<sp/>std::cout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;Process<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>msg<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="31"><highlight class="normal">}</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/localmpi.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/massmodel1d_8_h.xml b/doxyxml/massmodel1d_8_h.xml
deleted file mode 100644
index 9c89fbd..0000000
--- a/doxyxml/massmodel1d_8_h.xml
+++ /dev/null
@@ -1,605 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="massmodel1d_8_h" kind="file" language="C++">
-    <compoundname>massmodel1d.H</compoundname>
-    <includes local="no">string</includes>
-    <includes local="no">tuple</includes>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
-      <node id="21">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="11">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H</label>
-        <link refid="massmodel1d_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="19">
-        <label>cstdlib</label>
-      </node>
-      <node id="10">
-        <label>deque</label>
-      </node>
-      <node id="14">
-        <label>functional</label>
-      </node>
-      <node id="17">
-        <label>iomanip</label>
-      </node>
-      <node id="16">
-        <label>iostream</label>
-      </node>
-      <node id="12">
-        <label>map</label>
-      </node>
-      <node id="6">
-        <label>memory</label>
-      </node>
-      <node id="7">
-        <label>random</label>
-      </node>
-      <node id="18">
-        <label>sstream</label>
-      </node>
-      <node id="2">
-        <label>string</label>
-      </node>
-      <node id="3">
-        <label>tuple</label>
-      </node>
-      <node id="5">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_low_iso" prot="public">LowIso</innerclass>
-    <innerclass refid="class_one_d_model" prot="public">OneDModel</innerclass>
-    <innerclass refid="class_one_d_model_table" prot="public">OneDModelTable</innerclass>
-    <innerclass refid="class_sech2" prot="public">Sech2</innerclass>
-    <innerclass refid="class_sech2_halo" prot="public">Sech2Halo</innerclass>
-    <innerclass refid="class_sech2mu" prot="public">Sech2mu</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//<sp/>-*-<sp/>C++<sp/>-*-</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_massmodel1d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_massmodel1d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;tuple&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_one_d_model" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_one_d_model" kindref="compound">OneDModel</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_mass_model" kindref="compound">MassModel</ref></highlight></codeline>
-<codeline lineno="12"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15" refid="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" kindref="member">dist_defined</ref>;</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>AxiSymModel(void)<sp/>{};</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="19" refid="class_one_d_model_1aa4b6d3af73f6b25cf2f778c1968b0d18" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1aa4b6d3af73f6b25cf2f778c1968b0d18" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="20" refid="class_one_d_model_1a36bf5a5421bcb001b7cbb098b333a22f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a36bf5a5421bcb001b7cbb098b333a22f" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="21" refid="class_one_d_model_1aa5f03b329b6c2150a2f7251ebaa405ce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1aa5f03b329b6c2150a2f7251ebaa405ce" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="22" refid="class_one_d_model_1ad6d9a4440bf0bac22ed75a635602e686" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1ad6d9a4440bf0bac22ed75a635602e686" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="23" refid="class_one_d_model_1ae49154b0d0be811cf708c722e56fcbad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1ae49154b0d0be811cf708c722e56fcbad" kindref="member">get_dpot2</ref><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="24" refid="class_one_d_model_1ab370c05a2d27583c06585420fa3bc06b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>tuple&lt;double,<sp/>double&gt;<sp/><ref refid="class_one_d_model_1ab370c05a2d27583c06585420fa3bc06b" kindref="member">get_pot_dpot</ref><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>members<sp/>of<sp/>mass<sp/>model</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_one_d_model_1a7d460c77bbe4df3c606646fc1f85b3cc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a7d460c77bbe4df3c606646fc1f85b3cc" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1aa4b6d3af73f6b25cf2f778c1968b0d18" kindref="member">get_mass</ref>(z);}</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_one_d_model_1aa72ae0534d1742dc620ef51c1b7bb87c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1aa72ae0534d1742dc620ef51c1b7bb87c" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a36bf5a5421bcb001b7cbb098b333a22f" kindref="member">get_density</ref>(z);}</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_one_d_model_1adb23181ed139049e72215399fd35903d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1adb23181ed139049e72215399fd35903d" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1aa5f03b329b6c2150a2f7251ebaa405ce" kindref="member">get_pot</ref>(z);}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_one_d_model_1a66315da9c08d18cb68024af19eeec439" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a66315da9c08d18cb68024af19eeec439" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="41" refid="class_one_d_model_1a7cd00ddac7b6b98b99038aeba357cdd9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a7cd00ddac7b6b98b99038aeba357cdd9" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="42" refid="class_one_d_model_1a731e02ea35b5ca65e7ee5422aaaff9dc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a731e02ea35b5ca65e7ee5422aaaff9dc" kindref="member">get_scale_height</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="43" refid="class_one_d_model_1a90447f8d07909613a601cba30103c997" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a90447f8d07909613a601cba30103c997" kindref="member">distf</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>V=0.0)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="44" refid="class_one_d_model_1a28f2ac357aa2545471aa90d1615a4d63" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a28f2ac357aa2545471aa90d1615a4d63" kindref="member">dfde</ref><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>V=0.0)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="45" refid="class_one_d_model_1a824c504cfe32d8a85435f34baaf59126" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_1a824c504cfe32d8a85435f34baaf59126" kindref="member">dfdv</ref><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>V=0.0)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_one_d_model_table" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_one_d_model_table" kindref="compound">OneDModelTable</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model" kindref="compound">OneDModel</ref></highlight></codeline>
-<codeline lineno="49"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_one_d_model_table_1a4ce783800c36e42ba666ebb27fcb1b57" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spline1d" kindref="compound">Spline1d</ref><sp/><ref refid="class_one_d_model_table_1a96eb98b80968b9be90bde6edce829481" kindref="member">mass</ref>,<sp/><ref refid="class_one_d_model_table_1a4ce783800c36e42ba666ebb27fcb1b57" kindref="member">dens</ref>,<sp/><ref refid="class_one_d_model_table_1a148490588ccd45c4de1cf35755430125" kindref="member">pot</ref>;</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_one_d_model_table_1a6eef5bec584f19ecde4df300e07ca775" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a6eef5bec584f19ecde4df300e07ca775" kindref="member">even</ref>;</highlight></codeline>
-<codeline lineno="55" refid="class_one_d_model_table_1a13af397adcd543794a09f4ab31447bf9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a13af397adcd543794a09f4ab31447bf9" kindref="member">num</ref>;</highlight></codeline>
-<codeline lineno="56" refid="class_one_d_model_table_1a307377282a0fa0c0d8a06c979bda5cbc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a307377282a0fa0c0d8a06c979bda5cbc" kindref="member">numdf</ref>;</highlight></codeline>
-<codeline lineno="57" refid="class_one_d_model_table_1a63ffc21df240a99ac5ddddc3e78cfca5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a63ffc21df240a99ac5ddddc3e78cfca5" kindref="member">half_height</ref>;</highlight></codeline>
-<codeline lineno="58" refid="class_one_d_model_table_1a222b7209329a36dabb3461c99d79ec00" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_one_d_model_table_1a222b7209329a36dabb3461c99d79ec00" kindref="member">params</ref>;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="class_one_d_model_table_1a92597f0ed86bcf669a7b834551293e90" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_one_d_model_table_1a92597f0ed86bcf669a7b834551293e90" kindref="member">OneDModelTable</ref>()<sp/>{};</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_one_d_model_table_1a5e281d5772863d714fa51c4d3cf5006b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_one_d_model_table_1a5e281d5772863d714fa51c4d3cf5006b" kindref="member">OneDModelTable</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>filename,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>PARM=0);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="class_one_d_model_table_1a75247475b6c835339ea5f019f491168d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_one_d_model_table_1a75247475b6c835339ea5f019f491168d" kindref="member">OneDModelTable</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a13af397adcd543794a09f4ab31447bf9" kindref="member">num</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*d,<sp/></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*m,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*p,<sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>ID<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_one_d_model_table_1add70877c6dedaaafcc44854e41647761" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1add70877c6dedaaafcc44854e41647761" kindref="member">get_mass</ref><sp/><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="72" refid="class_one_d_model_table_1ad53cdc9450e1a669b16a97447efd15fb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1ad53cdc9450e1a669b16a97447efd15fb" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="73" refid="class_one_d_model_table_1ad56038569382682b210d23f6e1164086" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1ad56038569382682b210d23f6e1164086" kindref="member">get_pot</ref><sp/><sp/><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="74" refid="class_one_d_model_table_1a664d695909c5fa222ea6ce4f88d9fe00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a664d695909c5fa222ea6ce4f88d9fe00" kindref="member">get_dpot</ref><sp/><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="75" refid="class_one_d_model_table_1a4e077b93f5bae985d3f2d2d222bd8766" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a4e077b93f5bae985d3f2d2d222bd8766" kindref="member">get_dpot2</ref><sp/><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="76" refid="class_one_d_model_table_1abf38f04aee03835550e1c1d76721c336" refkind="member"><highlight class="normal"><sp/><sp/>tuple&lt;double,<sp/>double&gt;<sp/><ref refid="class_one_d_model_table_1abf38f04aee03835550e1c1d76721c336" kindref="member">get_pot_dpot</ref><sp/>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Additional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_one_d_model_table_1a8ec67a864d750aef79d0219070ca800e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a8ec67a864d750aef79d0219070ca800e" kindref="member">get_num_param</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a222b7209329a36dabb3461c99d79ec00" kindref="member">params</ref>.size();<sp/>}</highlight></codeline>
-<codeline lineno="81" refid="class_one_d_model_table_1a7387b5e9a4566c79c3ef947e998347d7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a7387b5e9a4566c79c3ef947e998347d7" kindref="member">get_param</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a222b7209329a36dabb3461c99d79ec00" kindref="member">params</ref>[i-1];<sp/>}</highlight></codeline>
-<codeline lineno="82" refid="class_one_d_model_table_1a1d12f76deb8659f22c400cb7538d94e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a1d12f76deb8659f22c400cb7538d94e9" kindref="member">get_scale_height</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a63ffc21df240a99ac5ddddc3e78cfca5" kindref="member">half_height</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"></highlight></codeline>
-<codeline lineno="84" refid="class_one_d_model_table_1a4860f3919c37e90be0328cd512544c70" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a4860f3919c37e90be0328cd512544c70" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a96eb98b80968b9be90bde6edce829481" kindref="member">mass</ref>.<ref refid="class_spline1d_1a604862983923c498185d9177d2b40d99" kindref="member">xlo</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="85" refid="class_one_d_model_table_1a13f27de596abd616ee395c5a27323346" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a13f27de596abd616ee395c5a27323346" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a96eb98b80968b9be90bde6edce829481" kindref="member">mass</ref>.<ref refid="class_spline1d_1ae85bd74849b3023151a8b22ff9c61a72" kindref="member">xhi</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="86" refid="class_one_d_model_table_1aa2adead86bdb5ab0c186c9528d0c6984" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_one_d_model_table_1aa2adead86bdb5ab0c186c9528d0c6984" kindref="member">grid_size</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a13af397adcd543794a09f4ab31447bf9" kindref="member">num</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>double<sp/>distf(double<sp/>E,<sp/>double<sp/>V);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>double<sp/>dfde(double<sp/>E,<sp/>double<sp/>V);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight><highlight class="comment">//<sp/><sp/>double<sp/>dfdv(double<sp/>E,<sp/>double<sp/>V);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_low_iso" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_low_iso" kindref="compound">LowIso</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table" kindref="compound">OneDModelTable</ref></highlight></codeline>
-<codeline lineno="94"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="96" refid="class_low_iso_1a9095f5a8858367c489cd914cd8d5287c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1adee084a533d3479701a892bd8aa73686" kindref="member">w0</ref>,<sp/><ref refid="class_low_iso_1a62320550a35b6b839349a582d7e46c19" kindref="member">Bfac</ref>,<sp/><ref refid="class_low_iso_1a9095f5a8858367c489cd914cd8d5287c" kindref="member">betak</ref>,<sp/><ref refid="class_low_iso_1a8c58d738f629e09b08f94948cc95d1f5" kindref="member">gammak</ref>;</highlight></codeline>
-<codeline lineno="97" refid="class_low_iso_1a31650b5ffdb04fe6d91bb673dc429af4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1a31650b5ffdb04fe6d91bb673dc429af4" kindref="member">dispx</ref>,<sp/><ref refid="class_low_iso_1a677732d96950809b60d34533dc030230" kindref="member">normx</ref>;</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_low_iso_1af072a4e54fcc8539ba38b3b63a11a51b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1af072a4e54fcc8539ba38b3b63a11a51b" kindref="member">setup_model</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="102" refid="class_low_iso_1a60eff352ada0bd26cc709c6d28b5dce6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_low_iso_1a60eff352ada0bd26cc709c6d28b5dce6" kindref="member">LowIso</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>filename,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DISPX=0.159154943091895335768)<sp/>:</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_one_d_model_table" kindref="compound">OneDModelTable</ref>(filename,<sp/>1)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_low_iso_1a31650b5ffdb04fe6d91bb673dc429af4" kindref="member">dispx</ref><sp/>=<sp/>DISPX;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_low_iso_1af072a4e54fcc8539ba38b3b63a11a51b" kindref="member">setup_model</ref>();</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"></highlight></codeline>
-<codeline lineno="108" refid="class_low_iso_1a475da94a1554df56dd551a3c1067afc5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1a475da94a1554df56dd551a3c1067afc5" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="109" refid="class_low_iso_1a97dcfb6ac42ac33adc898ef51b31cd72" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1a97dcfb6ac42ac33adc898ef51b31cd72" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="110" refid="class_low_iso_1a87f376041d3883cf81f67da2d60c28d8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1a87f376041d3883cf81f67da2d60c28d8" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="111" refid="class_low_iso_1a09db5d567afa70a4a8ac0819e61bd3d0" refkind="member"><highlight class="normal"><sp/><sp/>tuple&lt;double,<sp/>double&gt;<sp/><ref refid="class_low_iso_1a09db5d567afa70a4a8ac0819e61bd3d0" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113" refid="class_low_iso_1a73a4fd6a7e3ac640a7ce76d2bdaac9f4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1a73a4fd6a7e3ac640a7ce76d2bdaac9f4" kindref="member">distf</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>V=0.0);</highlight></codeline>
-<codeline lineno="114" refid="class_low_iso_1ab464db3d9964ed70a6592020be666bdb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1ab464db3d9964ed70a6592020be666bdb" kindref="member">dfde</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>V=0.0);</highlight></codeline>
-<codeline lineno="115" refid="class_low_iso_1a1d22332a8a5ffadb4863b3b153cf6193" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_low_iso_1a1d22332a8a5ffadb4863b3b153cf6193" kindref="member">dfdv</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>V=0.0);</highlight></codeline>
-<codeline lineno="116"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119" refid="class_sech2" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_sech2" kindref="compound">Sech2</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model" kindref="compound">OneDModel</ref></highlight></codeline>
-<codeline lineno="120"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="122" refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="123" refid="class_sech2_1a7b533fec1c6bc36c356488bdea806a92" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref>,<sp/><ref refid="class_sech2_1a7b533fec1c6bc36c356488bdea806a92" kindref="member">dispx</ref>;</highlight></codeline>
-<codeline lineno="124" refid="class_sech2_1ad5ca1fe2b3e6b2fc097006f62092bc4b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1ad5ca1fe2b3e6b2fc097006f62092bc4b" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="126" refid="class_sech2_1a5e73eae950e772030fb5894c1b65dd48" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a5e73eae950e772030fb5894c1b65dd48" kindref="member">HMAX</ref>;</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"></highlight></codeline>
-<codeline lineno="130" refid="class_sech2_1a1d67a0da8b078b168e3bb3a13a649271" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sech2_1a1d67a0da8b078b168e3bb3a13a649271" kindref="member">Sech2</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_1a7b533fec1c6bc36c356488bdea806a92" kindref="member">dispx</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Units:<sp/>G<sp/>=<sp/>rho_o<sp/>=<sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref><sp/>=<sp/>sqrt(<ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref>/(2.0*M_PI));</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_1ad5ca1fe2b3e6b2fc097006f62092bc4b" kindref="member">norm</ref><sp/>=<sp/>1.0/(<sp/>sqrt(2.0*M_PI*<ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref>)<sp/>);</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"></highlight></codeline>
-<codeline lineno="142" refid="class_sech2_1a281c9e020d54ea5cc4122c79c99065a9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sech2_1a281c9e020d54ea5cc4122c79c99065a9" kindref="member">Sech2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DISPZ,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DISPX=1.0)</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref><sp/>=<sp/>DISPZ;</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_1a7b533fec1c6bc36c356488bdea806a92" kindref="member">dispx</ref><sp/>=<sp/>DISPX;</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Units:<sp/>G<sp/>=<sp/>rho_o<sp/>=<sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref><sp/>=<sp/>sqrt(<ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref>/(2.0*M_PI));</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_1ad5ca1fe2b3e6b2fc097006f62092bc4b" kindref="member">norm</ref><sp/>=<sp/>1.0/(<sp/>sqrt(2.0*M_PI*<ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref>)<sp/>);</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="154" refid="class_sech2_1a5fd19696a14cb6081554ad824a673efe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a5fd19696a14cb6081554ad824a673efe" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>/(1.0<sp/>+<sp/>exp(-2.0*z/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"></highlight></codeline>
-<codeline lineno="159" refid="class_sech2_1a21b2ccb3518cee49a2f0f229fea98fad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a21b2ccb3518cee49a2f0f229fea98fad" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/>2.0*exp(-zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>)/(1.0<sp/>+<sp/>exp(-2.0*zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>ret*ret;</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166" refid="class_sech2_1a3cea1266380c2a94be8ddcb3b9c1bcf6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a3cea1266380c2a94be8ddcb3b9c1bcf6" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>4.0*M_PI*<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>*(zz<sp/>+<sp/><ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>*log(1.0<sp/>+<sp/>exp(-2.0*zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>))<sp/>-<sp/><ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>*M_LN2);</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"></highlight></codeline>
-<codeline lineno="172" refid="class_sech2_1a27011c23a6da9065aae09cada0733c9c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a27011c23a6da9065aae09cada0733c9c" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/>(1.0<sp/>-<sp/>exp(-2.0*zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>))/(1.0<sp/>+<sp/>exp(-2.0*zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>4.0*M_PI*<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>*<sp/>ret<sp/>*<sp/>z/(zz+1.0e-18);</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"></highlight></codeline>
-<codeline lineno="179" refid="class_sech2_1a489eac71138ee6553c982541b2a0e2d8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a489eac71138ee6553c982541b2a0e2d8" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/>2.0*exp(-zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>)/(1.0<sp/>+<sp/>exp(-2*zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>4.0*M_PI*ret*ret;</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"></highlight></codeline>
-<codeline lineno="186" refid="class_sech2_1ac55f8fa6555a5d054a266c82a978cc68" refkind="member"><highlight class="normal"><sp/><sp/>tuple&lt;double,<sp/>double&gt;<sp/><ref refid="class_sech2_1ac55f8fa6555a5d054a266c82a978cc68" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p<sp/>=<sp/>4.0*M_PI*<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>*(zz<sp/>+<sp/><ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>*log(1.0<sp/>+<sp/>exp(-2.0*zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>))<sp/>-<sp/><ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>*M_LN2);</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/>(1.0<sp/>-<sp/>exp(-2.0*zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>))/(1.0<sp/>+<sp/>exp(-2.0*zz/<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>dp<sp/>=<sp/>4.0*M_PI*<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>*<sp/>ret<sp/>*<sp/>z/(zz+1.0e-18);</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{p,<sp/>dp};</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"></highlight></codeline>
-<codeline lineno="195" refid="class_sech2_1ac8af79ba12e9d21498ec79fd48362343" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1ac8af79ba12e9d21498ec79fd48362343" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a5fd19696a14cb6081554ad824a673efe" kindref="member">get_mass</ref>(z);</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"></highlight></codeline>
-<codeline lineno="200" refid="class_sech2_1af760557ea3916d454b7dc60b44a3c323" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1af760557ea3916d454b7dc60b44a3c323" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a21b2ccb3518cee49a2f0f229fea98fad" kindref="member">get_density</ref>(z);</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205" refid="class_sech2_1a13e2545a2667f66503a698fbaf50501d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a13e2545a2667f66503a698fbaf50501d" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a3cea1266380c2a94be8ddcb3b9c1bcf6" kindref="member">get_pot</ref>(z);</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"></highlight></codeline>
-<codeline lineno="210" refid="class_sech2_1a920f2e4f7ed46af739d23ad8aaeb2414" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a920f2e4f7ed46af739d23ad8aaeb2414" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="211" refid="class_sech2_1a8510486184ddb860f8c25267a02d5443" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a8510486184ddb860f8c25267a02d5443" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a5e73eae950e772030fb5894c1b65dd48" kindref="member">HMAX</ref>*<ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="212" refid="class_sech2_1a0ea538e9e21f2bd9a27f1f8d3e331682" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a0ea538e9e21f2bd9a27f1f8d3e331682" kindref="member">get_scale_height</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a72b66f009853f5a2194bcd7faebe865b" kindref="member">h</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"></highlight></codeline>
-<codeline lineno="214" refid="class_sech2_1ab0ab27add6f0e36378d02a659e19fee6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1ab0ab27add6f0e36378d02a659e19fee6" kindref="member">set_hmax</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>hmax)<sp/>{<sp/><ref refid="class_sech2_1a5e73eae950e772030fb5894c1b65dd48" kindref="member">HMAX</ref><sp/>=<sp/>hmax;<sp/>}</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="216" refid="class_sech2_1a5860e85bbda507f5a5f2890dd6ae4d7e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a5860e85bbda507f5a5f2890dd6ae4d7e" kindref="member">distf</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p)</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>exp(-E/<ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref><sp/>-<sp/>0.5*p*p/<ref refid="class_sech2_1a7b533fec1c6bc36c356488bdea806a92" kindref="member">dispx</ref>)<sp/>*<sp/><ref refid="class_sech2_1ad5ca1fe2b3e6b2fc097006f62092bc4b" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight></codeline>
-<codeline lineno="221" refid="class_sech2_1a7e01a0767be262197de5421d4710d20e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1a7e01a0767be262197de5421d4710d20e" kindref="member">dfde</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p)</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-exp(-E/<ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref><sp/>-<sp/>0.5*p*p/<ref refid="class_sech2_1a7b533fec1c6bc36c356488bdea806a92" kindref="member">dispx</ref>)/<ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref><sp/>*<sp/><ref refid="class_sech2_1ad5ca1fe2b3e6b2fc097006f62092bc4b" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"></highlight></codeline>
-<codeline lineno="226" refid="class_sech2_1aab645c15663424031f72cbf544f4e253" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_1aab645c15663424031f72cbf544f4e253" kindref="member">dfdv</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p)</highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-exp(-E/<ref refid="class_sech2_1ad838643702684ab0efb8d9b3700b671f" kindref="member">dispz</ref><sp/>-<sp/>0.5*p*p/<ref refid="class_sech2_1a7b533fec1c6bc36c356488bdea806a92" kindref="member">dispx</ref>)*p/<ref refid="class_sech2_1a7b533fec1c6bc36c356488bdea806a92" kindref="member">dispx</ref><sp/>*<sp/><ref refid="class_sech2_1ad5ca1fe2b3e6b2fc097006f62092bc4b" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"></highlight></codeline>
-<codeline lineno="231"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"></highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight></codeline>
-<codeline lineno="235" refid="class_sech2mu" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_sech2mu" kindref="compound">Sech2mu</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model" kindref="compound">OneDModel</ref></highlight></codeline>
-<codeline lineno="236"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="238" refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>,<sp/><ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="239" refid="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>,<sp/><ref refid="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" kindref="member">dispx</ref>;</highlight></codeline>
-<codeline lineno="240" refid="class_sech2mu_1ad18329a6b217fc21dab556d595770987" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1ad18329a6b217fc21dab556d595770987" kindref="member">dnorm</ref>,<sp/><ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref>,<sp/><ref refid="class_sech2mu_1a200e81749ff0cdc2d6823f4f3b9a412d" kindref="member">fnorm</ref>;</highlight></codeline>
-<codeline lineno="241"><highlight class="normal"></highlight></codeline>
-<codeline lineno="242" refid="class_sech2mu_1aa83c72670b942efb080e1c8143e00c6d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1aa83c72670b942efb080e1c8143e00c6d" kindref="member">HMAX</ref>;</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"></highlight></codeline>
-<codeline lineno="246" refid="class_sech2mu_1a4586a05af366e649ec20626de2b5bc4a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sech2mu_1a4586a05af366e649ec20626de2b5bc4a" kindref="member">Sech2mu</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref><sp/><sp/><sp/><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" kindref="member">dispx</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Units:<sp/>G<sp/>=<sp/>mu<sp/>=<sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1ad18329a6b217fc21dab556d595770987" kindref="member">dnorm</ref><sp/>=<sp/>0.25*<ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref><sp/>=<sp/>2.0*M_PI*<ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>*<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>/<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>;</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a200e81749ff0cdc2d6823f4f3b9a412d" kindref="member">fnorm</ref><sp/>=<sp/><ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>/(4.0*<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>*<ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref>*sqrt(2.0*M_PI*<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>));</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"></highlight></codeline>
-<codeline lineno="261" refid="class_sech2mu_1a235547f97216c8f93b4707319bbd7f1b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sech2mu_1a235547f97216c8f93b4707319bbd7f1b" kindref="member">Sech2mu</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DISPZ,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>H,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DISPX=1.0)</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref><sp/><sp/><sp/><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref><sp/>=<sp/>DISPZ;</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" kindref="member">dispx</ref><sp/>=<sp/>DISPX;</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>H;</highlight></codeline>
-<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Units:<sp/>G<sp/>=<sp/>mu<sp/>=<sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1ad18329a6b217fc21dab556d595770987" kindref="member">dnorm</ref><sp/>=<sp/>0.25*<ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref><sp/>=<sp/>2.0*M_PI*<ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>*<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>/<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>;</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a200e81749ff0cdc2d6823f4f3b9a412d" kindref="member">fnorm</ref><sp/>=<sp/><ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>/(4.0*<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>*<ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref>*sqrt(2.0*M_PI*<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>));</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="276" refid="class_sech2mu_1acc90f957b33d93bd9c899f849f87dc81" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1acc90f957b33d93bd9c899f849f87dc81" kindref="member">setMu</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Sigma0)</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref><sp/>=<sp/>Sigma0;</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Units:<sp/>G<sp/>=<sp/>1,<sp/>mu<sp/>=<sp/>Sigma0</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1ad18329a6b217fc21dab556d595770987" kindref="member">dnorm</ref><sp/>=<sp/>0.25*<ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref><sp/>=<sp/>2.0*M_PI*<ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>*<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>/<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>;</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2mu_1a200e81749ff0cdc2d6823f4f3b9a412d" kindref="member">fnorm</ref><sp/>=<sp/><ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>/(4.0*<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>*<ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref>*sqrt(2.0*M_PI*<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>));</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"></highlight></codeline>
-<codeline lineno="288" refid="class_sech2mu_1a280b38413667e2bbc578ff0d1880cb96" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a280b38413667e2bbc578ff0d1880cb96" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a44adca6bd2eb24615782cf51854fa5ae" kindref="member">mu</ref>*exp(z/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>)/(1.0<sp/>+<sp/>exp(z/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"></highlight></codeline>
-<codeline lineno="292" refid="class_sech2mu_1aefb389703162c82bdbd378ffb4ac5b6e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1aefb389703162c82bdbd378ffb4ac5b6e" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/><sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>fac<sp/>=<sp/>exp(zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>);</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>4.0*<ref refid="class_sech2mu_1ad18329a6b217fc21dab556d595770987" kindref="member">dnorm</ref>/(fac<sp/>+<sp/>1.0/fac<sp/>+<sp/>2.0);</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"></highlight></codeline>
-<codeline lineno="298" refid="class_sech2mu_1a3357b99372f2ad6709547eacbe23564a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a3357b99372f2ad6709547eacbe23564a" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="299"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>2.0*<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>*(-M_LN2<sp/>+<sp/>0.5*zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref><sp/>+<sp/>log(1.0<sp/>+<sp/>exp(-zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>))<sp/>)<sp/>-<sp/><ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>*log(<ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref>);</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"></highlight></codeline>
-<codeline lineno="303" refid="class_sech2mu_1a21624b0bc54448c5a7150108d6250eb7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a21624b0bc54448c5a7150108d6250eb7" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/>(1.0<sp/>-<sp/>exp(-zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>))/(1.0<sp/>+<sp/>exp(-zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.5*<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>*ret/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref><sp/>*<sp/>z/(zz+1.0e-18);</highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"></highlight></codeline>
-<codeline lineno="309" refid="class_sech2mu_1ae738a3a533ac38ce522e4418c4cffc8d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1ae738a3a533ac38ce522e4418c4cffc8d" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/>2.0*exp(-0.5*zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>)/(1.0<sp/>+<sp/>exp(-zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.5*<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>*ret*ret/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>;</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"></highlight></codeline>
-<codeline lineno="315" refid="class_sech2mu_1ac971fb0a153f65704a7d1d258f2534f8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1ac971fb0a153f65704a7d1d258f2534f8" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dp)<sp/>{</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>zz<sp/>=<sp/>fabs(z);</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/>p<sp/>=<sp/>2.0*<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>*(-M_LN2<sp/>+<sp/>0.5*zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref><sp/>+<sp/>log(1.0<sp/>+<sp/>exp(-zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>))<sp/>)<sp/>-<sp/><ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>*log(<ref refid="class_sech2mu_1a1dd4e4ba108bda4805d0e92d0cb8abcf" kindref="member">knorm</ref>);</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/>(1.0<sp/>-<sp/>exp(-zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>))/(1.0<sp/>+<sp/>exp(-zz/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>));</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/>dp<sp/>=<sp/>0.5*<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref>*ret/<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref><sp/>*<sp/>z/(zz+1.0e-18);</highlight></codeline>
-<codeline lineno="320"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"></highlight></codeline>
-<codeline lineno="322" refid="class_sech2mu_1aaf514c80063dbf15738c07818af79667" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1aaf514c80063dbf15738c07818af79667" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a280b38413667e2bbc578ff0d1880cb96" kindref="member">get_mass</ref>(z);</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"></highlight></codeline>
-<codeline lineno="326" refid="class_sech2mu_1a7148b943d8985eb9fa5e4b8b134723fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a7148b943d8985eb9fa5e4b8b134723fe" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1aefb389703162c82bdbd378ffb4ac5b6e" kindref="member">get_density</ref>(z);</highlight></codeline>
-<codeline lineno="328"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"></highlight></codeline>
-<codeline lineno="330" refid="class_sech2mu_1ad9e04f22e60d76c1bd019d4735d4dc28" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1ad9e04f22e60d76c1bd019d4735d4dc28" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>y,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a3357b99372f2ad6709547eacbe23564a" kindref="member">get_pot</ref>(z);</highlight></codeline>
-<codeline lineno="332"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="333"><highlight class="normal"></highlight></codeline>
-<codeline lineno="334" refid="class_sech2mu_1a3adaf076ed21c50693fe81e19e093437" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a3adaf076ed21c50693fe81e19e093437" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="335" refid="class_sech2mu_1a2322562fbeaabc23888a8d3bd9c58775" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a2322562fbeaabc23888a8d3bd9c58775" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1aa83c72670b942efb080e1c8143e00c6d" kindref="member">HMAX</ref>*<ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="336" refid="class_sech2mu_1a3c6153bc8cd4ca73ac9e22a16aa33c9b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a3c6153bc8cd4ca73ac9e22a16aa33c9b" kindref="member">get_scale_height</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1ac83bff3f72453d2ca8ebf80d4cafb303" kindref="member">h</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"></highlight></codeline>
-<codeline lineno="338" refid="class_sech2mu_1a4062f66511d1d30a7416b906a70345f9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a4062f66511d1d30a7416b906a70345f9" kindref="member">set_hmax</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>hmax)<sp/>{<sp/><ref refid="class_sech2mu_1aa83c72670b942efb080e1c8143e00c6d" kindref="member">HMAX</ref><sp/>=<sp/>hmax;<sp/>}</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"></highlight></codeline>
-<codeline lineno="340" refid="class_sech2mu_1abdf3f40cd28488793293c00422cff081" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1abdf3f40cd28488793293c00422cff081" kindref="member">distf</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p)<sp/>{</highlight></codeline>
-<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>exp(-E/<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref><sp/>-<sp/>0.5*p*p/<ref refid="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" kindref="member">dispx</ref>)<sp/>*<sp/><ref refid="class_sech2mu_1a200e81749ff0cdc2d6823f4f3b9a412d" kindref="member">fnorm</ref>;</highlight></codeline>
-<codeline lineno="342"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="343"><highlight class="normal"></highlight></codeline>
-<codeline lineno="344" refid="class_sech2mu_1a52fa1422592a401f44099f9e14a2eff4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a52fa1422592a401f44099f9e14a2eff4" kindref="member">dfde</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p)<sp/>{</highlight></codeline>
-<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-exp(-E/<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref><sp/>-<sp/>0.5*p*p/<ref refid="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" kindref="member">dispx</ref>)/<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref><sp/>*<sp/><ref refid="class_sech2mu_1a200e81749ff0cdc2d6823f4f3b9a412d" kindref="member">fnorm</ref>;</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="347"><highlight class="normal"></highlight></codeline>
-<codeline lineno="348" refid="class_sech2mu_1a2f286c63e1fc3a89aba461737c68da45" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2mu_1a2f286c63e1fc3a89aba461737c68da45" kindref="member">dfdv</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p)<sp/>{</highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-exp(-E/<ref refid="class_sech2mu_1a4b9935e08464d38c69f636929e59385a" kindref="member">dispz</ref><sp/>-<sp/>0.5*p*p/<ref refid="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" kindref="member">dispx</ref>)*p/<ref refid="class_sech2mu_1a568d9e221693d0c1dc22c7303dc903ac" kindref="member">dispx</ref><sp/>*<sp/><ref refid="class_sech2mu_1a200e81749ff0cdc2d6823f4f3b9a412d" kindref="member">fnorm</ref>;</highlight></codeline>
-<codeline lineno="350"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"></highlight></codeline>
-<codeline lineno="352"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="353"><highlight class="normal"></highlight></codeline>
-<codeline lineno="354"><highlight class="normal"></highlight></codeline>
-<codeline lineno="355" refid="class_sech2_halo" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_sech2_halo" kindref="compound">Sech2Halo</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table" kindref="compound">OneDModelTable</ref></highlight></codeline>
-<codeline lineno="356"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="357"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="358" refid="class_sech2_halo_1abc7c22a389f20719d2e677a2813b5e0b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1abc7c22a389f20719d2e677a2813b5e0b" kindref="member">h</ref>,<sp/><ref refid="class_sech2_halo_1a1a67b0ae932eefe52764cf1750aebf8c" kindref="member">rho0</ref>;</highlight></codeline>
-<codeline lineno="359" refid="class_sech2_halo_1a7fe92ce68e8047f8f0491d2b6eb0e0e7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1aacde0445e6f7efb482ea9bbdfe7d144a" kindref="member">dispz</ref>,<sp/><ref refid="class_sech2_halo_1a7fe92ce68e8047f8f0491d2b6eb0e0e7" kindref="member">dispx</ref>;</highlight></codeline>
-<codeline lineno="360" refid="class_sech2_halo_1abf1f521956fdd60ab59f62b7912a6142" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1abf1f521956fdd60ab59f62b7912a6142" kindref="member">dratio</ref>,<sp/><ref refid="class_sech2_halo_1adda427e95b379ad1c3547cffff794f73" kindref="member">hratio</ref>;</highlight></codeline>
-<codeline lineno="361" refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>,<sp/><ref refid="class_sech2_halo_1a0ba0ebf7bd0dfc1bc068c70c2e038672" kindref="member">rho0h</ref>;</highlight></codeline>
-<codeline lineno="362" refid="class_sech2_halo_1a83386c95dfc8a1454ef0c852f3744dfe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a3d3b1850b2cdb3fd2f9213ed974ec5f8" kindref="member">norm</ref>,<sp/><ref refid="class_sech2_halo_1a83386c95dfc8a1454ef0c852f3744dfe" kindref="member">hmax</ref>;</highlight></codeline>
-<codeline lineno="363"><highlight class="normal"></highlight></codeline>
-<codeline lineno="364" refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" kindref="member">model_computed</ref>;</highlight></codeline>
-<codeline lineno="365"><highlight class="normal"></highlight></codeline>
-<codeline lineno="366" refid="class_sech2_halo_1acad8385bd9d582d0f64c04c50ebd72b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1acad8385bd9d582d0f64c04c50ebd72b0" kindref="member">HMAX</ref>;</highlight></codeline>
-<codeline lineno="367"><highlight class="normal"></highlight></codeline>
-<codeline lineno="368" refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="369"><highlight class="normal"></highlight></codeline>
-<codeline lineno="370"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="371"><highlight class="normal"></highlight></codeline>
-<codeline lineno="372" refid="class_sech2_halo_1aa42295fa4a1e71311175bb93b145a923" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1aa42295fa4a1e71311175bb93b145a923" kindref="member">NTABLE</ref>;</highlight></codeline>
-<codeline lineno="373" refid="class_sech2_halo_1afa67df7d56755290505d873198363c76" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1afa67df7d56755290505d873198363c76" kindref="member">OFFSET</ref>;</highlight></codeline>
-<codeline lineno="374" refid="class_sech2_halo_1a0647984aa8a4b8181c2895c4e626b2bf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a0647984aa8a4b8181c2895c4e626b2bf" kindref="member">MU</ref>;</highlight></codeline>
-<codeline lineno="375"><highlight class="normal"></highlight></codeline>
-<codeline lineno="376" refid="class_sech2_halo_1a8fa1bcf5d0600b81454bff6fbdfe18d1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sech2_halo_1a8fa1bcf5d0600b81454bff6fbdfe18d1" kindref="member">Sech2Halo</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight></codeline>
-<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_halo_1aacde0445e6f7efb482ea9bbdfe7d144a" kindref="member">dispz</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_halo_1a7fe92ce68e8047f8f0491d2b6eb0e0e7" kindref="member">dispx</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_halo_1abf1f521956fdd60ab59f62b7912a6142" kindref="member">dratio</ref><sp/>=<sp/>0.0;</highlight></codeline>
-<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_halo_1adda427e95b379ad1c3547cffff794f73" kindref="member">hratio</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="381"><highlight class="normal"></highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_one_d_model_1ab91f597e08f2074d21fe5aaff6cb9840" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" kindref="member">model_computed</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="385"><highlight class="normal"></highlight></codeline>
-<codeline lineno="386" refid="class_sech2_halo_1ad8d24d4f7a993052762a68283e9700cc" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sech2_halo_1ad8d24d4f7a993052762a68283e9700cc" kindref="member">Sech2Halo</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DISPZ,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DRATIO,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>HRATIO,</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DISPX=1.0);</highlight></codeline>
-<codeline lineno="388"><highlight class="normal"></highlight></codeline>
-<codeline lineno="389" refid="class_sech2_halo_1abdbec9d1f9d9d715bbe14fd8ea29f44f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1abdbec9d1f9d9d715bbe14fd8ea29f44f" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" kindref="member">model_computed</ref>)<sp/><ref refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1ad56038569382682b210d23f6e1164086" kindref="member">OneDModelTable::get_pot</ref>(z)<sp/>+<sp/>4.0*M_PI*<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>*<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>*<ref refid="class_sech2_halo_1a0ba0ebf7bd0dfc1bc068c70c2e038672" kindref="member">rho0h</ref>*log(cosh(z/<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>));</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="393"><highlight class="normal"></highlight></codeline>
-<codeline lineno="394" refid="class_sech2_halo_1a5a3779ee0a6c041d226a016029bba335" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a5a3779ee0a6c041d226a016029bba335" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="395"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" kindref="member">model_computed</ref>)<sp/><ref refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a664d695909c5fa222ea6ce4f88d9fe00" kindref="member">OneDModelTable::get_dpot</ref>(z)<sp/>+<sp/>4.0*M_PI*<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>*<ref refid="class_sech2_halo_1a0ba0ebf7bd0dfc1bc068c70c2e038672" kindref="member">rho0h</ref>*tanh(z/<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>);</highlight></codeline>
-<codeline lineno="397"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight></codeline>
-<codeline lineno="399" refid="class_sech2_halo_1a071987eef52f3833829579039487bc58" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a071987eef52f3833829579039487bc58" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" kindref="member">model_computed</ref>)<sp/><ref refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sech<sp/>=<sp/>1.0/cosh(z/<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>);</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_one_d_model_table_1a4e077b93f5bae985d3f2d2d222bd8766" kindref="member">OneDModelTable::get_dpot2</ref>(z)<sp/>+<sp/>4.0*M_PI*<ref refid="class_sech2_halo_1a0ba0ebf7bd0dfc1bc068c70c2e038672" kindref="member">rho0h</ref>*sech*sech;</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="404"><highlight class="normal"></highlight></codeline>
-<codeline lineno="405" refid="class_sech2_halo_1ac0d7b6ac339e81210d37f546a68f4e8a" refkind="member"><highlight class="normal"><sp/><sp/>std::tuple&lt;double,<sp/>double&gt;<sp/><ref refid="class_sech2_halo_1ac0d7b6ac339e81210d37f546a68f4e8a" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="406"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" kindref="member">model_computed</ref>)<sp/><ref refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">auto</highlight><highlight class="normal"><sp/>[p,<sp/>dp]<sp/>=<sp/><ref refid="class_one_d_model_table_1abf38f04aee03835550e1c1d76721c336" kindref="member">OneDModelTable::get_pot_dpot</ref>(z);</highlight></codeline>
-<codeline lineno="408"><highlight class="normal"><sp/><sp/><sp/><sp/>p<sp/>+=<sp/>4.0*M_PI*<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>*<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>*<ref refid="class_sech2_halo_1a0ba0ebf7bd0dfc1bc068c70c2e038672" kindref="member">rho0h</ref>*log(cosh(z/<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>));</highlight></codeline>
-<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/>dp<sp/>+=<sp/>4.0*M_PI*<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>*<ref refid="class_sech2_halo_1a0ba0ebf7bd0dfc1bc068c70c2e038672" kindref="member">rho0h</ref>*tanh(z/<ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>);</highlight></codeline>
-<codeline lineno="410"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>{p,<sp/>dp};</highlight></codeline>
-<codeline lineno="411"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="412"><highlight class="normal"></highlight></codeline>
-<codeline lineno="413"><highlight class="normal"></highlight></codeline>
-<codeline lineno="414" refid="class_sech2_halo_1ab2e0e44472cd552e609dd83c649c1337" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1ab2e0e44472cd552e609dd83c649c1337" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="415" refid="class_sech2_halo_1a38a8bcbc87313c16a9e42a1245e6ee58" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a38a8bcbc87313c16a9e42a1245e6ee58" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a83386c95dfc8a1454ef0c852f3744dfe" kindref="member">hmax</ref>*<ref refid="class_sech2_halo_1abc7c22a389f20719d2e677a2813b5e0b" kindref="member">h</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="416" refid="class_sech2_halo_1aebc66367268c82524b43f0dd7ec6cc2e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1aebc66367268c82524b43f0dd7ec6cc2e" kindref="member">get_scale_height</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1abc7c22a389f20719d2e677a2813b5e0b" kindref="member">h</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="417" refid="class_sech2_halo_1aaa8aa8f37718675efa394a72605b022c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1aaa8aa8f37718675efa394a72605b022c" kindref="member">get_scale_height_halo</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a4d3ab68c74d509c2218b4696395d34ae" kindref="member">hh</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="418" refid="class_sech2_halo_1adaa205b0bed4acba29d67be2de1dea31" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1adaa205b0bed4acba29d67be2de1dea31" kindref="member">get_rho0</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a1a67b0ae932eefe52764cf1750aebf8c" kindref="member">rho0</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="419" refid="class_sech2_halo_1a92b733cae43e8f63f6245d8979010215" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a92b733cae43e8f63f6245d8979010215" kindref="member">get_rho0_halo</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a0ba0ebf7bd0dfc1bc068c70c2e038672" kindref="member">rho0h</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="420"><highlight class="normal"></highlight></codeline>
-<codeline lineno="421" refid="class_sech2_halo_1a8ef7a2eb773ae48e9bae1421e7513afb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a8ef7a2eb773ae48e9bae1421e7513afb" kindref="member">set_hmax</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a83386c95dfc8a1454ef0c852f3744dfe" kindref="member">hmax</ref>)<sp/>{<sp/><ref refid="class_sech2_halo_1acad8385bd9d582d0f64c04c50ebd72b0" kindref="member">HMAX</ref><sp/>=<sp/><ref refid="class_sech2_halo_1a83386c95dfc8a1454ef0c852f3744dfe" kindref="member">hmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="422"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="423" refid="class_sech2_halo_1a29aca7f9d88c6b6f5803512eea131e8c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a29aca7f9d88c6b6f5803512eea131e8c" kindref="member">distf</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p=0.0)<sp/>{</highlight></codeline>
-<codeline lineno="424"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" kindref="member">model_computed</ref>)<sp/><ref refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>exp(-E/<ref refid="class_sech2_halo_1aacde0445e6f7efb482ea9bbdfe7d144a" kindref="member">dispz</ref><sp/>-<sp/>0.5*p*p/<ref refid="class_sech2_halo_1a7fe92ce68e8047f8f0491d2b6eb0e0e7" kindref="member">dispx</ref>)<sp/>*<sp/><ref refid="class_sech2_halo_1a3d3b1850b2cdb3fd2f9213ed974ec5f8" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="426"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="427"><highlight class="normal"></highlight></codeline>
-<codeline lineno="428" refid="class_sech2_halo_1a0a8a787bc45e04c2ecb35e97e887b31f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sech2_halo_1a0a8a787bc45e04c2ecb35e97e887b31f" kindref="member">dfde</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>p=0.0)<sp/>{</highlight></codeline>
-<codeline lineno="429"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_sech2_halo_1a0e713c384d6a1b2b55a39fe9e92aad84" kindref="member">model_computed</ref>)<sp/><ref refid="class_sech2_halo_1aa18bb82e5b9c45a8f2b819754c477d5a" kindref="member">reset</ref>();</highlight></codeline>
-<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-exp(-E/<ref refid="class_sech2_halo_1aacde0445e6f7efb482ea9bbdfe7d144a" kindref="member">dispz</ref><sp/>-<sp/>0.5*p*p/<ref refid="class_sech2_halo_1a7fe92ce68e8047f8f0491d2b6eb0e0e7" kindref="member">dispx</ref>)/<ref refid="class_sech2_halo_1aacde0445e6f7efb482ea9bbdfe7d144a" kindref="member">dispz</ref><sp/>*<sp/><ref refid="class_sech2_halo_1a3d3b1850b2cdb3fd2f9213ed974ec5f8" kindref="member">norm</ref>;</highlight></codeline>
-<codeline lineno="431"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="432"><highlight class="normal"></highlight></codeline>
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index 4e9f467..0000000
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-    <innerclass refid="class_f_d_i_s_t_c" prot="public">FDISTC</innerclass>
-    <innerclass refid="class_mass_model" prot="public">MassModel</innerclass>
-    <innerclass refid="class_r_u_n" prot="public">RUN</innerclass>
-    <innerclass refid="class_spherical_model_multi" prot="public">SphericalModelMulti</innerclass>
-    <innerclass refid="class_spherical_model_table" prot="public">SphericalModelTable</innerclass>
-    <innerclass refid="class_axi_sym_model_1_1_w_rgrid" prot="protected">AxiSymModel::WRgrid</innerclass>
-    <sectiondef kind="typedef">
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-        <type>std::shared_ptr&lt; <ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;AxiSymModel&gt; AxiSymModPtr</definition>
-        <argsstring></argsstring>
-        <name>AxiSymModPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="522" column="33" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="522" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="massmodel_8_h_1a3b5cbef7099eb404794ee3757b4173c5" prot="public" static="no">
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-        <definition>typedef std::shared_ptr&lt;EmbeddedDiskModel&gt; EmbDiskModPtr</definition>
-        <argsstring></argsstring>
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-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="523" column="27" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="523" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="massmodel_8_h_1ab083c5a53e65a3de93fdedd49770600d" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_spherical_model_multi" kindref="compound">SphericalModelMulti</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;SphericalModelMulti&gt; SphModMultPtr</definition>
-        <argsstring></argsstring>
-        <name>SphModMultPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="524" column="25" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="524" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="massmodel_8_h_1a30c7b68deea71f1b058c78ee1f7f0c14" prot="public" static="no">
-        <type>std::shared_ptr&lt; <ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref> &gt;</type>
-        <definition>typedef std::shared_ptr&lt;SphericalModelTable&gt; SphModTblPtr</definition>
-        <argsstring></argsstring>
-        <name>SphModTblPtr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/massmodel.H" line="525" column="25" bodyfile="/home/weinberg/Projects/EXP/include/massmodel.H" bodystart="525" bodyend="-1"/>
-      </memberdef>
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-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
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-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*s)</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;MassModel<sp/>error<sp/>from<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>s;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_axi_sym_model" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_mass_model" kindref="compound">MassModel</ref>,</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>std::enable_shared_from_this&lt;AxiSymModel&gt;</highlight></codeline>
-<codeline lineno="113"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_axi_sym_model_1a4d9c94aa4ebf8308dbb660e9f53093e1" refkind="member"><highlight class="normal"><sp/><sp/>std::uniform_real_distribution&lt;&gt;<sp/><ref refid="class_axi_sym_model_1a4d9c94aa4ebf8308dbb660e9f53093e1" kindref="member">Unit</ref>;</highlight></codeline>
-<codeline lineno="119" refid="class_axi_sym_model_1aeda764e1f1145cf03bc79e89cb5f28ee" refkind="member"><highlight class="normal"><sp/><sp/>std::normal_distribution&lt;&gt;<sp/><ref refid="class_axi_sym_model_1aeda764e1f1145cf03bc79e89cb5f28ee" kindref="member">Gauss</ref>;</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121" refid="class_axi_sym_model_1ad3e1a1fcfe55dfa0f9332673faaad460" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1ad3e1a1fcfe55dfa0f9332673faaad460" kindref="member">gen_firstime</ref>;</highlight></codeline>
-<codeline lineno="122" refid="class_axi_sym_model_1a0256603484bb0820fe8ec15cc0f88a84" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a0256603484bb0820fe8ec15cc0f88a84" kindref="member">gen_firstime_E</ref>;</highlight></codeline>
-<codeline lineno="123" refid="class_axi_sym_model_1a16b08425c760dcb7fe24635c05a4d9b1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a16b08425c760dcb7fe24635c05a4d9b1" kindref="member">gen_firstime_jeans</ref>;</highlight></codeline>
-<codeline lineno="124" refid="class_axi_sym_model_1a5b9f30c0297a19e48806f53aa6b9d68e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a35aead49704365788684b280e04c21f2" kindref="member">gen_rloc</ref>,<sp/><ref refid="class_axi_sym_model_1a21d0612b687d8f4e2fa57f45ebea5ad9" kindref="member">gen_mass</ref>,<sp/><ref refid="class_axi_sym_model_1a5b9f30c0297a19e48806f53aa6b9d68e" kindref="member">gen_fmax</ref>;</highlight></codeline>
-<codeline lineno="125" refid="class_axi_sym_model_1a274294584539a1bf61ddcb08d28385e4" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref><sp/><ref refid="class_axi_sym_model_1a274294584539a1bf61ddcb08d28385e4" kindref="member">gen_orb</ref>;</highlight></codeline>
-<codeline lineno="126" refid="class_axi_sym_model_1a85758608cec039affbc42c2ad3390056" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1aaf38968f265e18cf20e403041279435c" kindref="member">gen_fomax</ref>,<sp/><ref refid="class_axi_sym_model_1a85758608cec039affbc42c2ad3390056" kindref="member">gen_ecut</ref>;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"></highlight></codeline>
-<codeline lineno="129" refid="class_axi_sym_model_1a65a0d8629fdcf8dcb1e3bcf17eee2fd0" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a65a0d8629fdcf8dcb1e3bcf17eee2fd0" kindref="member">gen_point_2d</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="130" refid="class_axi_sym_model_1a18ecb1fa667cf977306b34d3dab34ed1" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a18ecb1fa667cf977306b34d3dab34ed1" kindref="member">gen_point_2d</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="131" refid="class_axi_sym_model_1a98fb5e4481e2ee8ecc7a47db1ae33f44" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a98fb5e4481e2ee8ecc7a47db1ae33f44" kindref="member">gen_point_3d</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="132" refid="class_axi_sym_model_1a20602aa25410c1f5d2bc3bf017899049" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a20602aa25410c1f5d2bc3bf017899049" kindref="member">gen_point_3d</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Emin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Emax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Kmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Kmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="133" refid="class_axi_sym_model_1a13d7af1df29796004e2d14194d8d8c7a" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a13d7af1df29796004e2d14194d8d8c7a" kindref="member">gen_point_jeans_3d</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="135" refid="class_axi_sym_model_1a3556ad7640450879dd0d3d922c2cf6b9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1acf573aca18c8e1687d639133d5710ea7" kindref="member">Emin_grid</ref>,<sp/><ref refid="class_axi_sym_model_1a8ee767a8941390c7816d9c1c27bb4334" kindref="member">Emax_grid</ref>,<sp/><ref refid="class_axi_sym_model_1a3556ad7640450879dd0d3d922c2cf6b9" kindref="member">dEgrid</ref>,<sp/><ref refid="class_axi_sym_model_1a526eabe43c3685815c0fab271accbe32" kindref="member">dKgrid</ref>;</highlight></codeline>
-<codeline lineno="136" refid="class_axi_sym_model_1a86935282f15c2976cd9d5faef793d63e" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_axi_sym_model_1a86935282f15c2976cd9d5faef793d63e" kindref="member">Egrid</ref>,<sp/><ref refid="class_axi_sym_model_1a95335dec87e9759cfb620c1cafb10a83" kindref="member">Kgrid</ref>,<sp/><ref refid="class_axi_sym_model_1aedf45b15e0286153ef407f957a1eebf7" kindref="member">EgridMass</ref>;</highlight></codeline>
-<codeline lineno="137" refid="class_axi_sym_model_1a9e96775fb63f7ad15e20ed12ada30e66" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_axi_sym_model_1a9e96775fb63f7ad15e20ed12ada30e66" kindref="member">Jmax</ref>;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="139" refid="class_axi_sym_model_1_1_w_rgrid" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_axi_sym_model_1_1_w_rgrid" kindref="compound">WRgrid</ref></highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="142" refid="class_axi_sym_model_1_1_w_rgrid_1a48d094ace0768dec92815a7679793b05" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_axi_sym_model_1_1_w_rgrid_1a48d094ace0768dec92815a7679793b05" kindref="member">w1</ref>;</highlight></codeline>
-<codeline lineno="143" refid="class_axi_sym_model_1_1_w_rgrid_1a2e407a13dcc918e3775d493868a6d1bd" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>vector&lt;double&gt;<sp/><ref refid="class_axi_sym_model_1_1_w_rgrid_1a2e407a13dcc918e3775d493868a6d1bd" kindref="member">r</ref>;</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="146" refid="class_axi_sym_model_1a624c90f1d36963b7b023b9818a41b43b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>vector&lt;WRgrid&gt;<sp/><ref refid="class_axi_sym_model_1a624c90f1d36963b7b023b9818a41b43b" kindref="member">wrvector</ref>;</highlight></codeline>
-<codeline lineno="147" refid="class_axi_sym_model_1a1f18cc5ef08cdb02dcf6d794410c04f6" refkind="member"><highlight class="normal"><sp/><sp/>vector&lt;wrvector&gt;<sp/><ref refid="class_axi_sym_model_1a1f18cc5ef08cdb02dcf6d794410c04f6" kindref="member">Rgrid</ref>;</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="149"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight></codeline>
-<codeline lineno="152" refid="class_axi_sym_model_1a89d1c8c1a334e17d164229404284b1aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a89d1c8c1a334e17d164229404284b1aa" kindref="member">gen_EJ</ref>;</highlight></codeline>
-<codeline lineno="153" refid="class_axi_sym_model_1a793a2dff2246be92c1e4b2ff900087a1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a0c33462222d9cb53229f9572b07cf792" kindref="member">numr</ref>,<sp/><ref refid="class_axi_sym_model_1a793a2dff2246be92c1e4b2ff900087a1" kindref="member">numj</ref>;</highlight></codeline>
-<codeline lineno="154" refid="class_axi_sym_model_1ac697c676c4cdf1a2f6fd9aaa0afc3cf1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1ac697c676c4cdf1a2f6fd9aaa0afc3cf1" kindref="member">gen_N</ref>;</highlight></codeline>
-<codeline lineno="155" refid="class_axi_sym_model_1af60c7d2a97b4e2242ece29ba77f990a8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1af60c7d2a97b4e2242ece29ba77f990a8" kindref="member">gen_E</ref>;</highlight></codeline>
-<codeline lineno="156" refid="class_axi_sym_model_1a739b1e9027c37122906c3f38d88b3a17" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a739b1e9027c37122906c3f38d88b3a17" kindref="member">gen_K</ref>;</highlight></codeline>
-<codeline lineno="157" refid="class_axi_sym_model_1a2b491db27d15b7b20b6f9ab473373d90" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a2b491db27d15b7b20b6f9ab473373d90" kindref="member">gen_itmax</ref>;</highlight></codeline>
-<codeline lineno="158" refid="class_axi_sym_model_1a2ddd661afb64be0edc0c903cc1d0d6a3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a2ddd661afb64be0edc0c903cc1d0d6a3" kindref="member">gen_logr</ref>;</highlight></codeline>
-<codeline lineno="159" refid="class_axi_sym_model_1a0dd4a002aead3430280c95b84a33848c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a0dd4a002aead3430280c95b84a33848c" kindref="member">gen_rmin</ref>;</highlight></codeline>
-<codeline lineno="160" refid="class_axi_sym_model_1a1df0ddafb9d52556b7306aac0b4d1390" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a1df0ddafb9d52556b7306aac0b4d1390" kindref="member">gen_kmin</ref>;</highlight></codeline>
-<codeline lineno="161" refid="class_axi_sym_model_1a8fd26f16e980f9ca09582c43d37d556b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a8fd26f16e980f9ca09582c43d37d556b" kindref="member">gen_tolE</ref>,<sp/><ref refid="class_axi_sym_model_1a34258a7b205c15211b94d68869ff481a" kindref="member">gen_tolK</ref>;</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="165" refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref>;</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="168" refid="class_axi_sym_model_1ac0df4b049522622b8ac3c4b087be83a5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_axi_sym_model_1ac0df4b049522622b8ac3c4b087be83a5" kindref="member">AxiSymModel</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;AxiSymModel&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1ad3e1a1fcfe55dfa0f9332673faaad460" kindref="member">gen_firstime</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a0256603484bb0820fe8ec15cc0f88a84" kindref="member">gen_firstime_E</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a16b08425c760dcb7fe24635c05a4d9b1" kindref="member">gen_firstime_jeans</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a85758608cec039affbc42c2ad3390056" kindref="member">gen_ecut</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="177" refid="class_axi_sym_model_1ac9a6c290463cfe45d95656d37c0c45f8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1ac9a6c290463cfe45d95656d37c0c45f8" kindref="member">~AxiSymModel</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="180" refid="class_axi_sym_model_1a17660c094f1c143f779c7ce7e667de86" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a17660c094f1c143f779c7ce7e667de86" kindref="member">set_itmax</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>s)<sp/>{<sp/><ref refid="class_axi_sym_model_1a2b491db27d15b7b20b6f9ab473373d90" kindref="member">gen_itmax</ref><sp/>=<sp/>s;}</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="183"><highlight class="normal"></highlight></codeline>
-<codeline lineno="184" refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="185" refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="186" refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="187" refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1acc81caff799658620cd3075a2104d845" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="188" refid="class_axi_sym_model_1a77b9bb693457557d379167ca0ca2caae" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a77b9bb693457557d379167ca0ca2caae" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="189" refid="class_axi_sym_model_1a4fc766458a1f45b3ece0410b2c85b632" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a4fc766458a1f45b3ece0410b2c85b632" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="191" refid="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a0cf696274a70d513e020046e796b0787" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="192"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a7d2efb78351c828250fd6bfc1b3a7465" kindref="member">get_mass</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="194" refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1ab7eaa6f141efb864c02c45ed602b8bcc" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="195"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1afe871e6b3d1dee86e7f045262559f69a" kindref="member">get_density</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="197" refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a7494ef2d7e5cd796414c8a9a231bb3cc" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight><highlight class="keyword"><sp/>override</highlight></codeline>
-<codeline lineno="198"><highlight class="keyword"><sp/><sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a1c0583421a9f67665aa9157cbe16bbba" kindref="member">get_pot</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>access<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="203" refid="class_axi_sym_model_1ab304897a450a2d79f4e27841526b70e9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1ab304897a450a2d79f4e27841526b70e9" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="204" refid="class_axi_sym_model_1a87510a095e6b9533812eba57c7ca862c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a87510a095e6b9533812eba57c7ca862c" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="205" refid="class_axi_sym_model_1a5530c3612f1c09c6c77401a9e21550b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a5530c3612f1c09c6c77401a9e21550b8" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="206" refid="class_axi_sym_model_1a2978a19f299f41fdea7e3cefc1164e3a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a2978a19f299f41fdea7e3cefc1164e3a" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="207" refid="class_axi_sym_model_1a120cec5af54e43d727f83df8678cc93b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a120cec5af54e43d727f83df8678cc93b" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="208" refid="class_axi_sym_model_1a12d39568c81a72b9e3ea2277816d05f9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a12d39568c81a72b9e3ea2277816d05f9" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="212" refid="class_axi_sym_model_1acb659b6dc20ae1410997e69144677423" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1acb659b6dc20ae1410997e69144677423" kindref="member">set_Ecut</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>cut)<sp/>{<sp/><ref refid="class_axi_sym_model_1a85758608cec039affbc42c2ad3390056" kindref="member">gen_ecut</ref><sp/>=<sp/>cut;<sp/>}</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"></highlight></codeline>
-<codeline lineno="215" refid="class_axi_sym_model_1a29297280d1fb4603b2138a7a2ede86f4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a29297280d1fb4603b2138a7a2ede86f4" kindref="member">gen_point</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr)<sp/>{</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" kindref="member">dof</ref>()==2)</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a65a0d8629fdcf8dcb1e3bcf17eee2fd0" kindref="member">gen_point_2d</ref>(ierr);</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" kindref="member">dof</ref>()==3)</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a98fb5e4481e2ee8ecc7a47db1ae33f44" kindref="member">gen_point_3d</ref>(ierr);</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(<sp/></highlight><highlight class="stringliteral">&quot;dof<sp/>must<sp/>be<sp/>2<sp/>or<sp/>3&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>Eigen::VectorXd();</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="227" refid="class_axi_sym_model_1adcafd558768aeb72e0cc483f231a1be5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1adcafd558768aeb72e0cc483f231a1be5" kindref="member">gen_point_jeans</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr)<sp/>{</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" kindref="member">dof</ref>()==2)</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(<sp/></highlight><highlight class="stringliteral">&quot;AxiSymModel:<sp/>gen_point_jeans_2d(ierr)<sp/>not<sp/>implemented!&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" kindref="member">dof</ref>()==3)</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a13d7af1df29796004e2d14194d8d8c7a" kindref="member">gen_point_jeans_3d</ref>(ierr);</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(<sp/></highlight><highlight class="stringliteral">&quot;dof<sp/>must<sp/>be<sp/>2<sp/>or<sp/>3&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>Eigen::VectorXd();</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="239" refid="class_axi_sym_model_1a8ec2585dc6f33e2ebae4f8dd3d22fc5a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a8ec2585dc6f33e2ebae4f8dd3d22fc5a" kindref="member">gen_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr)<sp/>{</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" kindref="member">dof</ref>()==2)</highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a65a0d8629fdcf8dcb1e3bcf17eee2fd0" kindref="member">gen_point_2d</ref>(r,<sp/>ierr);</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" kindref="member">dof</ref>()==3)</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(<sp/></highlight><highlight class="stringliteral">&quot;AxiSymModel:<sp/>gen_point(r,<sp/>ierr)<sp/>not<sp/>implemented!&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(<sp/></highlight><highlight class="stringliteral">&quot;AxiSymModel:<sp/>dof<sp/>must<sp/>be<sp/>2<sp/>or<sp/>3&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>Eigen::VectorXd();</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="251" refid="class_axi_sym_model_1a5e4cb31e8463807b1b14b3858c5c03b2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/><ref refid="class_axi_sym_model_1a5e4cb31e8463807b1b14b3858c5c03b2" kindref="member">gen_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Emin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Emax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Kmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Kmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr)<sp/>{</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" kindref="member">dof</ref>()==2)</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(<sp/></highlight><highlight class="stringliteral">&quot;AxiSymModel:<sp/>gen_point(r,<sp/>ierr)<sp/>not<sp/>implemented!&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_mass_model_1a92409cb4786626a1beb92bea71d05846" kindref="member">dof</ref>()==3)</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a98fb5e4481e2ee8ecc7a47db1ae33f44" kindref="member">gen_point_3d</ref>(Emin,<sp/>Emax,<sp/>Kmin,<sp/>Kmax,<sp/>ierr);</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(<sp/></highlight><highlight class="stringliteral">&quot;AxiSymModel:<sp/>dof<sp/>must<sp/>be<sp/>2<sp/>or<sp/>3&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>Eigen::VectorXd();</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="263" refid="class_axi_sym_model_1a524ea3beb7a799ffa2c5f90afbcf0bd7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model_1a524ea3beb7a799ffa2c5f90afbcf0bd7" kindref="member">gen_velocity</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*pos,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*vel,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="265"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="267" refid="class_embedded_disk_model" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_embedded_disk_model" kindref="compound">EmbeddedDiskModel</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="268"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="270" refid="class_embedded_disk_model_1a60259225298ae2b78f06eb1069913894" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;std::shared_ptr&lt;AxiSymModel&gt;&gt;<sp/><ref refid="class_embedded_disk_model_1a60259225298ae2b78f06eb1069913894" kindref="member">t</ref>;</highlight></codeline>
-<codeline lineno="271" refid="class_embedded_disk_model_1af7ea75e1ee4bb4f445cb73aef8bd1db6" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_embedded_disk_model_1af7ea75e1ee4bb4f445cb73aef8bd1db6" kindref="member">m_scale</ref>;</highlight></codeline>
-<codeline lineno="272" refid="class_embedded_disk_model_1a13be365db0b8ec677925da151c9c1925" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_embedded_disk_model_1a13be365db0b8ec677925da151c9c1925" kindref="member">r_scale</ref>;</highlight></codeline>
-<codeline lineno="273" refid="class_embedded_disk_model_1a8cd2eda102d370ea71686d5d29f87c35" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a8cd2eda102d370ea71686d5d29f87c35" kindref="member">number</ref>;</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"></highlight></codeline>
-<codeline lineno="275" refid="class_embedded_disk_model_1a013a9cf3680cd4312e8c87eb6fedc940" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a741b14e7a7660a9bff0ea1d4b8740a85" kindref="member">rmin</ref>,<sp/><ref refid="class_embedded_disk_model_1a013a9cf3680cd4312e8c87eb6fedc940" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"></highlight></codeline>
-<codeline lineno="277" refid="class_embedded_disk_model_1a305e72fa2bf96219c22bf3fe60be53ea" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;QPDistF&gt;<sp/><ref refid="class_embedded_disk_model_1a305e72fa2bf96219c22bf3fe60be53ea" kindref="member">df</ref>;</highlight></codeline>
-<codeline lineno="278"><highlight class="normal"></highlight></codeline>
-<codeline lineno="279"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="280" refid="class_embedded_disk_model_1a3d5457b4263c763c7155d39457ea686c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_embedded_disk_model_1a3d5457b4263c763c7155d39457ea686c" kindref="member">EmbeddedDiskModel</ref>(std::vector&lt;std::shared_ptr&lt;AxiSymModel&gt;&gt;&amp;<sp/>T,</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;&amp;<sp/>M_scale,<sp/>std::vector&lt;double&gt;&amp;<sp/>R_scale,<sp/></highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NUMBER);</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"></highlight></codeline>
-<codeline lineno="284" refid="class_embedded_disk_model_1a08374bd50847d14c440ef6dcc74db9b2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a08374bd50847d14c440ef6dcc74db9b2" kindref="member">~EmbeddedDiskModel</ref>();</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"></highlight></codeline>
-<codeline lineno="286" refid="class_embedded_disk_model_1ad924cd677753a5086cb9a732141b6890" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1ad924cd677753a5086cb9a732141b6890" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="287" refid="class_embedded_disk_model_1a3ffbd7a622f73cfe9b67ffae80cfed7f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a3ffbd7a622f73cfe9b67ffae80cfed7f" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="288" refid="class_embedded_disk_model_1adcae86dad89afdc7dc8fd5b47ee61341" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1adcae86dad89afdc7dc8fd5b47ee61341" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="289" refid="class_embedded_disk_model_1a2d94fa2b784f522685eac97b24814511" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a2d94fa2b784f522685eac97b24814511" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="290" refid="class_embedded_disk_model_1a6f1261707e304ed949152834f9d0546d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a6f1261707e304ed949152834f9d0546d" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="291" refid="class_embedded_disk_model_1a1d6c6b5414d1b9dcf4ec0f0da0195975" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a1d6c6b5414d1b9dcf4ec0f0da0195975" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;);</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"></highlight></codeline>
-<codeline lineno="293" refid="class_embedded_disk_model_1af5bbd571cbf33b33a467787f0573dd86" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1af5bbd571cbf33b33a467787f0573dd86" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1ad924cd677753a5086cb9a732141b6890" kindref="member">get_mass</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"></highlight></codeline>
-<codeline lineno="296" refid="class_embedded_disk_model_1a5c763b865ff6b4caeb10eac78e753195" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a5c763b865ff6b4caeb10eac78e753195" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a3ffbd7a622f73cfe9b67ffae80cfed7f" kindref="member">get_density</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299" refid="class_embedded_disk_model_1a4cd777af4aeb22c21232eeb6bdae8ceb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a4cd777af4aeb22c21232eeb6bdae8ceb" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1adcae86dad89afdc7dc8fd5b47ee61341" kindref="member">get_pot</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"></highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Additional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="303"><highlight class="normal"></highlight></codeline>
-<codeline lineno="304" refid="class_embedded_disk_model_1a8f2ea37fe3204aa4b0007550d16502c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a8f2ea37fe3204aa4b0007550d16502c8" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a741b14e7a7660a9bff0ea1d4b8740a85" kindref="member">rmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="305" refid="class_embedded_disk_model_1ad0b95260439369297ff2477923a26f02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1ad0b95260439369297ff2477923a26f02" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a013a9cf3680cd4312e8c87eb6fedc940" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"></highlight></codeline>
-<codeline lineno="307" refid="class_embedded_disk_model_1ab75172efea01ab09a33a428f7d93c816" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1ab75172efea01ab09a33a428f7d93c816" kindref="member">setup_df</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>egrid=10,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>kgrid=5,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>mgrid=20,</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>lambda=0.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>alpha=-6.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>beta=1.0,</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>gama=1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sigma=2.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmmax=-1,<sp/></highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>roff=0.05,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>eoff=0.5,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>koff=0.5,<sp/></highlight></codeline>
-<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>kmin=0.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>kmax=1.0,</highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>nint=20,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>numt=20);</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"></highlight></codeline>
-<codeline lineno="314"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Read<sp/>in<sp/>from<sp/>state<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="315"><highlight class="normal"></highlight></codeline>
-<codeline lineno="316" refid="class_embedded_disk_model_1a5ff2809557c68d961591f38015d15e84" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a5ff2809557c68d961591f38015d15e84" kindref="member">setup_df</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"></highlight></codeline>
-<codeline lineno="318" refid="class_embedded_disk_model_1a94c9dc67a4fe9ce9e6781c94038ac912" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_embedded_disk_model_1a94c9dc67a4fe9ce9e6781c94038ac912" kindref="member">verbose_df</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="319" refid="class_embedded_disk_model_1a5938bf509e455e6a650532281381ef74" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a5938bf509e455e6a650532281381ef74" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="320" refid="class_embedded_disk_model_1a526648e3e521b7e20c849ee946e1c9bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1a526648e3e521b7e20c849ee946e1c9bc" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="321" refid="class_embedded_disk_model_1ab602c8ab25b558773b02c597f9e893ea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1ab602c8ab25b558773b02c597f9e893ea" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="322" refid="class_embedded_disk_model_1ae4147a269a409ebc897970fd781d1f69" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_embedded_disk_model_1ae4147a269a409ebc897970fd781d1f69" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="323" refid="class_embedded_disk_model_1ad576ae0fd642854f3ffb9af2cb3945d6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_embedded_disk_model_1ad576ae0fd642854f3ffb9af2cb3945d6" kindref="member">save_df</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>);</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"></highlight></codeline>
-<codeline lineno="325"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"></highlight></codeline>
-<codeline lineno="327"><highlight class="normal"></highlight></codeline>
-<codeline lineno="338" refid="class_spherical_model_table" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_spherical_model_table" kindref="compound">SphericalModelTable</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="339"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="340"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="341" refid="class_spherical_model_table_1aa7d54607df40c72e98060edf9e8bd592" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_r_u_n" kindref="compound">RUN</ref><sp/><ref refid="class_spherical_model_table_1aa7d54607df40c72e98060edf9e8bd592" kindref="member">mass</ref>;</highlight></codeline>
-<codeline lineno="342" refid="class_spherical_model_table_1a1f297a9351eaa409ee5b6be2be98c531" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_r_u_n" kindref="compound">RUN</ref><sp/><ref refid="class_spherical_model_table_1a1f297a9351eaa409ee5b6be2be98c531" kindref="member">density</ref>;</highlight></codeline>
-<codeline lineno="343" refid="class_spherical_model_table_1ae53fdabf1362203af9f4e201e21a5063" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_r_u_n" kindref="compound">RUN</ref><sp/><ref refid="class_spherical_model_table_1ae53fdabf1362203af9f4e201e21a5063" kindref="member">pot</ref>;</highlight></codeline>
-<codeline lineno="344" refid="class_spherical_model_table_1a55ab5d0206ae4acb7dd7a311536c817f" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_f_d_i_s_t" kindref="compound">FDIST</ref><sp/><ref refid="class_spherical_model_table_1a55ab5d0206ae4acb7dd7a311536c817f" kindref="member">df</ref>;</highlight></codeline>
-<codeline lineno="345" refid="class_spherical_model_table_1a8783b8906588b09edc461a117bedd25b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_f_d_i_s_t_c" kindref="compound">FDISTC</ref><sp/><ref refid="class_spherical_model_table_1a8783b8906588b09edc461a117bedd25b" kindref="member">dfc</ref>;</highlight></codeline>
-<codeline lineno="346" refid="class_spherical_model_table_1a0f5240d6b744d914a4883b27a18d94b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a0f5240d6b744d914a4883b27a18d94b3" kindref="member">num</ref>;</highlight></codeline>
-<codeline lineno="347" refid="class_spherical_model_table_1a27cf5a4f90537f08458b3a91b1094f13" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a27cf5a4f90537f08458b3a91b1094f13" kindref="member">numdf</ref>;</highlight></codeline>
-<codeline lineno="348" refid="class_spherical_model_table_1af6b77bb08fabe2b78c5c74f8ce0d2cdb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1af6b77bb08fabe2b78c5c74f8ce0d2cdb" kindref="member">num_params</ref>;</highlight></codeline>
-<codeline lineno="349" refid="class_spherical_model_table_1a25714d81a0fbca9e2a873931d960453e" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_spherical_model_table_1a25714d81a0fbca9e2a873931d960453e" kindref="member">params</ref>;</highlight></codeline>
-<codeline lineno="350" refid="class_spherical_model_table_1a3121d2c8a918e71300b4d66e9b6bd0e8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a3121d2c8a918e71300b4d66e9b6bd0e8" kindref="member">diverge_rfac</ref>;</highlight></codeline>
-<codeline lineno="351" refid="class_spherical_model_table_1a5480fe0cb97105f5fafb43badc06fa37" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a5480fe0cb97105f5fafb43badc06fa37" kindref="member">foffset</ref>;</highlight></codeline>
-<codeline lineno="352" refid="class_spherical_model_table_1ad8d0edbdcd005f147b853fda5f352c81" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1ad8d0edbdcd005f147b853fda5f352c81" kindref="member">diverge</ref>;</highlight></codeline>
-<codeline lineno="353" refid="class_spherical_model_table_1a910161fc0a3b1813a9be7e0edff219c5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a910161fc0a3b1813a9be7e0edff219c5" kindref="member">external</ref>;</highlight></codeline>
-<codeline lineno="354"><highlight class="normal"></highlight></codeline>
-<codeline lineno="355" refid="class_spherical_model_table_1a6141e9cfc05d41df48b0b6d17fbb0c41" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a6141e9cfc05d41df48b0b6d17fbb0c41" kindref="member">debug_fdist</ref>();</highlight></codeline>
-<codeline lineno="356"><highlight class="normal"></highlight></codeline>
-<codeline lineno="357"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="358"><highlight class="normal"></highlight></codeline>
-<codeline lineno="360" refid="class_spherical_model_table_1a2a6528ed3560858a8d1c1c212d3d745c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a2a6528ed3560858a8d1c1c212d3d745c" kindref="member">count</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="361"><highlight class="normal"></highlight></codeline>
-<codeline lineno="363" refid="class_spherical_model_table_1a0fa75fb74430c8aa1ec544a336514b4f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a0fa75fb74430c8aa1ec544a336514b4f" kindref="member">even</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="364"><highlight class="normal"></highlight></codeline>
-<codeline lineno="366" refid="class_spherical_model_table_1aa4ca7ed14442c043a28de8cccd3c607c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1aa4ca7ed14442c043a28de8cccd3c607c" kindref="member">chebyN</ref>;</highlight></codeline>
-<codeline lineno="367"><highlight class="normal"></highlight></codeline>
-<codeline lineno="369" refid="class_spherical_model_table_1abf0438b18c101d65af18c199e476c25c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1abf0438b18c101d65af18c199e476c25c" kindref="member">linear</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="370"><highlight class="normal"></highlight></codeline>
-<codeline lineno="372" refid="class_spherical_model_table_1a2abf754ddd277c6887f6458b9e4b48fd" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_model_table_1a2abf754ddd277c6887f6458b9e4b48fd" kindref="member">SphericalModelTable</ref>(</highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/>filename,<sp/></highlight></codeline>
-<codeline lineno="373"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE<sp/>=<sp/>0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC<sp/>=<sp/>1.0,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>EXTERNAL<sp/>=<sp/>0);</highlight></codeline>
-<codeline lineno="374"><highlight class="normal"></highlight></codeline>
-<codeline lineno="376" refid="class_spherical_model_table_1a2473b375bf970e4f0adcd7aa8ad4782b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_model_table_1a2473b375bf970e4f0adcd7aa8ad4782b" kindref="member">SphericalModelTable</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a0f5240d6b744d914a4883b27a18d94b3" kindref="member">num</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*d,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*m,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*p,</highlight></codeline>
-<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE<sp/>=<sp/>0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC<sp/>=<sp/>0,</highlight></codeline>
-<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>EXTERNAL<sp/>=<sp/>0,<sp/>std::string<sp/>ID<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="379"><highlight class="normal"></highlight></codeline>
-<codeline lineno="381" refid="class_spherical_model_table_1a8d8e35619f55ae204e4928086b14eb6e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_model_table_1a8d8e35619f55ae204e4928086b14eb6e" kindref="member">SphericalModelTable</ref>(std::vector&lt;double&gt;&amp;<sp/>r,<sp/>std::vector&lt;double&gt;&amp;<sp/>d,</highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::vector&lt;double&gt;&amp;<sp/>m,<sp/>std::vector&lt;double&gt;&amp;<sp/>p,</highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>DIVERGE<sp/>=<sp/>0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>DIVERGE_RFAC<sp/>=<sp/>0,</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>EXTERNAL<sp/>=<sp/>0,<sp/>std::string<sp/>ID<sp/>=<sp/></highlight><highlight class="stringliteral">&quot;&quot;</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="385"><highlight class="normal"></highlight></codeline>
-<codeline lineno="387" refid="class_spherical_model_table_1a1aef10b60c3dc458d41aa32c94dc5cd2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a1aef10b60c3dc458d41aa32c94dc5cd2" kindref="member">~SphericalModelTable</ref>();</highlight></codeline>
-<codeline lineno="388"><highlight class="normal"></highlight></codeline>
-<codeline lineno="390"><highlight class="normal"></highlight></codeline>
-<codeline lineno="391" refid="class_spherical_model_table_1ab1ab4823de33209caba74cf2aa12c0d9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1ab1ab4823de33209caba74cf2aa12c0d9" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="392" refid="class_spherical_model_table_1a33ef4146cea85ef88bb6ff81b1410384" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a33ef4146cea85ef88bb6ff81b1410384" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="393" refid="class_spherical_model_table_1a0f56dc4e85e41f26fd1e5451043efb98" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a0f56dc4e85e41f26fd1e5451043efb98" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="394" refid="class_spherical_model_table_1a3a595da2880039eba8ceff3ec3f110b0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a3a595da2880039eba8ceff3ec3f110b0" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="395" refid="class_spherical_model_table_1a6ef6735b075e4b78e421e90af9b82b79" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a6ef6735b075e4b78e421e90af9b82b79" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="396" refid="class_spherical_model_table_1a17b838069ef3e835ab12c3382b303a44" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_spherical_model_table_1a17b838069ef3e835ab12c3382b303a44" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;);</highlight></codeline>
-<codeline lineno="397"><highlight class="normal"></highlight></codeline>
-<codeline lineno="398" refid="class_spherical_model_table_1a61db5a62762d085aaba14e2c6e49eac7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a61db5a62762d085aaba14e2c6e49eac7" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="399"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1ab1ab4823de33209caba74cf2aa12c0d9" kindref="member">get_mass</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="400"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="401" refid="class_spherical_model_table_1a2e8fbb9f875f6f5a02349ef4af6589db" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a2e8fbb9f875f6f5a02349ef4af6589db" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a33ef4146cea85ef88bb6ff81b1410384" kindref="member">get_density</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="403"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="404" refid="class_spherical_model_table_1a8070023a8858287d4cb5e50a66d64043" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a8070023a8858287d4cb5e50a66d64043" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="405"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a0f56dc4e85e41f26fd1e5451043efb98" kindref="member">get_pot</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="407"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="409"><highlight class="normal"></highlight></codeline>
-<codeline lineno="410" refid="class_spherical_model_table_1a1b4626374991cd7f54ef456ce332bdf0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a1b4626374991cd7f54ef456ce332bdf0" kindref="member">get_num_param</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1af6b77bb08fabe2b78c5c74f8ce0d2cdb" kindref="member">num_params</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="411" refid="class_spherical_model_table_1ac4c388ba456e4c438acbefef584d7812" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1ac4c388ba456e4c438acbefef584d7812" kindref="member">get_param</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a25714d81a0fbca9e2a873931d960453e" kindref="member">params</ref>[i];<sp/>}</highlight></codeline>
-<codeline lineno="412"><highlight class="normal"></highlight></codeline>
-<codeline lineno="413" refid="class_spherical_model_table_1a933d3a41d014192bd4743fb9baacded8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a933d3a41d014192bd4743fb9baacded8" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1aa7d54607df40c72e98060edf9e8bd592" kindref="member">mass</ref>.<ref refid="class_r_u_n_1a76f53056d68ccd55c6e525cc4da63851" kindref="member">x</ref>[0];<sp/>}</highlight></codeline>
-<codeline lineno="414" refid="class_spherical_model_table_1aec09ce7a1f0e60f3ff5f7d98788043d4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1aec09ce7a1f0e60f3ff5f7d98788043d4" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1aa7d54607df40c72e98060edf9e8bd592" kindref="member">mass</ref>.<ref refid="class_r_u_n_1a76f53056d68ccd55c6e525cc4da63851" kindref="member">x</ref>[<ref refid="class_spherical_model_table_1aa7d54607df40c72e98060edf9e8bd592" kindref="member">mass</ref>.<ref refid="class_r_u_n_1ab7530cfee3955f1a9f1deb497a83b1da" kindref="member">num</ref>-1];<sp/>}</highlight></codeline>
-<codeline lineno="415" refid="class_spherical_model_table_1ad33d2c931984a66dfd21f0d3545b93c5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1ad33d2c931984a66dfd21f0d3545b93c5" kindref="member">grid_size</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a0f5240d6b744d914a4883b27a18d94b3" kindref="member">num</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="416" refid="class_spherical_model_table_1acb906588e30b775b7bcc08ae1aa2f6c9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1acb906588e30b775b7bcc08ae1aa2f6c9" kindref="member">print_model</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="417" refid="class_spherical_model_table_1a552f072599a81e7dfc4a5c538c55e3f6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a552f072599a81e7dfc4a5c538c55e3f6" kindref="member">print_model_eval</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>number);</highlight></codeline>
-<codeline lineno="419"></codeline>
-<codeline lineno="421"><highlight class="normal"></highlight></codeline>
-<codeline lineno="422" refid="class_spherical_model_table_1ad82e8ed7d7e1d6143d8ff65a1c3d9954" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1ad82e8ed7d7e1d6143d8ff65a1c3d9954" kindref="member">setup_df</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NUM,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RA=1.0e20);</highlight></codeline>
-<codeline lineno="423" refid="class_spherical_model_table_1ab3f3ade6540be5240a1d86e3ea45fc83" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1ab3f3ade6540be5240a1d86e3ea45fc83" kindref="member">print_df</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>name);</highlight></codeline>
-<codeline lineno="424" refid="class_spherical_model_table_1a11344205c811bc5cf508d30ee227a9aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a11344205c811bc5cf508d30ee227a9aa" kindref="member">get_ra2</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a55ab5d0206ae4acb7dd7a311536c817f" kindref="member">df</ref>.<ref refid="class_f_d_i_s_t_1a0f18cde66e0010eb9be0b232a5fbbce2" kindref="member">ra2</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="426"></codeline>
-<codeline lineno="428"><highlight class="normal"></highlight></codeline>
-<codeline lineno="429" refid="class_spherical_model_table_1a7e795967d6e0ea7ae5d1bfb587de3781" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a7e795967d6e0ea7ae5d1bfb587de3781" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="430" refid="class_spherical_model_table_1a5ba1c043933eec9a59ac6424462331e8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a5ba1c043933eec9a59ac6424462331e8" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="431" refid="class_spherical_model_table_1a7f0dfb206b06a2c00a78aed4ccd2b590" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a7f0dfb206b06a2c00a78aed4ccd2b590" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="432" refid="class_spherical_model_table_1a43ef2fc096b70da850b7ab4cf15efcea" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_table_1a43ef2fc096b70da850b7ab4cf15efcea" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="434"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="435"><highlight class="normal"></highlight></codeline>
-<codeline lineno="436"><highlight class="normal"></highlight></codeline>
-<codeline lineno="442" refid="class_spherical_model_multi" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_spherical_model_multi" kindref="compound">SphericalModelMulti</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="443"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="444"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="445" refid="class_spherical_model_multi_1a5ba07cf46117a3f0146b3632587115aa" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>,<sp/><ref refid="class_spherical_model_multi_1a5ba07cf46117a3f0146b3632587115aa" kindref="member">fake</ref>;</highlight></codeline>
-<codeline lineno="446"><highlight class="normal"></highlight></codeline>
-<codeline lineno="447" refid="class_spherical_model_multi_1a818f56e96f16db3b9af80264b52d0ba5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref><sp/><ref refid="class_spherical_model_multi_1a586ca769582519c1d7d50b60bcd7442a" kindref="member">orb</ref>,<sp/><ref refid="class_spherical_model_multi_1a818f56e96f16db3b9af80264b52d0ba5" kindref="member">gen_orb</ref>;</highlight></codeline>
-<codeline lineno="448"><highlight class="normal"></highlight></codeline>
-<codeline lineno="449" refid="class_spherical_model_multi_1a528e9d4bfd048a6660c2e6a337c9c53c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a5e007384579bc0761340eb38bec0ce53" kindref="member">rmin_gen</ref>,<sp/><ref refid="class_spherical_model_multi_1a528e9d4bfd048a6660c2e6a337c9c53c" kindref="member">rmax_gen</ref>;</highlight></codeline>
-<codeline lineno="450" refid="class_spherical_model_multi_1a4f273d3d7c197960a73cee2e9801121e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a4f273d3d7c197960a73cee2e9801121e" kindref="member">noneg</ref>;</highlight></codeline>
-<codeline lineno="451"><highlight class="normal"></highlight></codeline>
-<codeline lineno="452"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="453"><highlight class="normal"></highlight></codeline>
-<codeline lineno="455" refid="class_spherical_model_multi_1a0010844b2cc2eaeb32f855392cc77721" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_model_multi_1a0010844b2cc2eaeb32f855392cc77721" kindref="member">SphericalModelMulti</ref>(std::shared_ptr&lt;AxiSymModel&gt;<sp/><ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>,</highlight></codeline>
-<codeline lineno="456"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/>Fake);</highlight></codeline>
-<codeline lineno="457"><highlight class="normal"></highlight></codeline>
-<codeline lineno="459"><highlight class="normal"></highlight></codeline>
-<codeline lineno="460" refid="class_spherical_model_multi_1a65ebc1eb5f35627454a0b6c4984f03b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a65ebc1eb5f35627454a0b6c4984f03b8" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="461"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;get_mass(r);<sp/>}</highlight></codeline>
-<codeline lineno="462"><highlight class="normal"></highlight></codeline>
-<codeline lineno="463" refid="class_spherical_model_multi_1a9a468fdf81143ee84f88305d2cd509c1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a9a468fdf81143ee84f88305d2cd509c1" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="464"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;get_density(r);<sp/>}</highlight></codeline>
-<codeline lineno="465"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="466" refid="class_spherical_model_multi_1aa65434e5ba8b9e7891271304c2d473f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1aa65434e5ba8b9e7891271304c2d473f2" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="467"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;get_pot(r);<sp/>}</highlight></codeline>
-<codeline lineno="468"><highlight class="normal"></highlight></codeline>
-<codeline lineno="469" refid="class_spherical_model_multi_1aa4e9bded3e82e3b4627f675b6b9b5964" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1aa4e9bded3e82e3b4627f675b6b9b5964" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="470"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;get_dpot(r);<sp/>}</highlight></codeline>
-<codeline lineno="471"><highlight class="normal"></highlight></codeline>
-<codeline lineno="472" refid="class_spherical_model_multi_1a8566c412db568e823ce4ef3cafaa3125" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a8566c412db568e823ce4ef3cafaa3125" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)</highlight></codeline>
-<codeline lineno="473"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;get_dpot2(r);<sp/>}</highlight></codeline>
-<codeline lineno="474"><highlight class="normal"></highlight></codeline>
-<codeline lineno="475" refid="class_spherical_model_multi_1ad230198fa39bc386d2511d4710554b02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1ad230198fa39bc386d2511d4710554b02" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>p,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>dp)</highlight></codeline>
-<codeline lineno="476"><highlight class="normal"><sp/><sp/>{<sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;get_pot_dpot(r,<sp/>p,<sp/>dp);<sp/>}</highlight></codeline>
-<codeline lineno="477"><highlight class="normal"></highlight></codeline>
-<codeline lineno="478" refid="class_spherical_model_multi_1a551f086df0f5490988e4c24dfee68814" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a551f086df0f5490988e4c24dfee68814" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="479"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a65ebc1eb5f35627454a0b6c4984f03b8" kindref="member">get_mass</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="480"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="481" refid="class_spherical_model_multi_1a7b6112e6579a55f85ac0fa259e31a74f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a7b6112e6579a55f85ac0fa259e31a74f" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="482"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a9a468fdf81143ee84f88305d2cd509c1" kindref="member">get_density</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="483"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="484" refid="class_spherical_model_multi_1a6461fc2527edb5dff8274536be27b94d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6461fc2527edb5dff8274536be27b94d" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x1,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x2,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x3)</highlight></codeline>
-<codeline lineno="485"><highlight class="normal"><sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1aa65434e5ba8b9e7891271304c2d473f2" kindref="member">get_pot</ref>(sqrt(x1*x1<sp/>+<sp/>x2*x2<sp/>+<sp/>x3*x3));<sp/>}</highlight></codeline>
-<codeline lineno="487"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="489"><highlight class="normal"></highlight></codeline>
-<codeline lineno="490" refid="class_spherical_model_multi_1aec9c6dae332ab2114dee54b0fe7c58fc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1aec9c6dae332ab2114dee54b0fe7c58fc" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;get_min_radius();<sp/>}</highlight></codeline>
-<codeline lineno="491" refid="class_spherical_model_multi_1aeca64ad986d43f323c40f28d22d3f819" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1aeca64ad986d43f323c40f28d22d3f819" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;get_max_radius();<sp/>}</highlight></codeline>
-<codeline lineno="493"></codeline>
-<codeline lineno="495"><highlight class="normal"></highlight></codeline>
-<codeline lineno="496" refid="class_spherical_model_multi_1ac81c1cc85381bef76d21ad391363fcd7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1ac81c1cc85381bef76d21ad391363fcd7" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;distf(E,<sp/>L);<sp/><sp/>}</highlight></codeline>
-<codeline lineno="497" refid="class_spherical_model_multi_1a78318dcbf890e273fed5ae48881f2422" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a78318dcbf890e273fed5ae48881f2422" kindref="member">dfde</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;dfde(E,<sp/>L);<sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="498" refid="class_spherical_model_multi_1abadc19b8b3e98840277f26aa1855daf4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1abadc19b8b3e98840277f26aa1855daf4" kindref="member">dfdl</ref><sp/>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;dfdl(E,<sp/>L);<sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="499" refid="class_spherical_model_multi_1a48f214779527bce69ec8d1d3a50846e7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a48f214779527bce69ec8d1d3a50846e7" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a6b437ac4960ab226b399f90e72bad10d" kindref="member">real</ref>-&gt;d2fde2(E,<sp/>L);<sp/>}</highlight></codeline>
-<codeline lineno="501"></codeline>
-<codeline lineno="503"><highlight class="normal"></highlight></codeline>
-<codeline lineno="504" refid="class_spherical_model_multi_1a07ef73cc9896c942f12558184ef946d3" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_spherical_model_multi_1a07ef73cc9896c942f12558184ef946d3" kindref="member">gen_point</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="505" refid="class_spherical_model_multi_1a4e551c031311012093e09b099ecf84c0" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_spherical_model_multi_1a4e551c031311012093e09b099ecf84c0" kindref="member">gen_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="506" refid="class_spherical_model_multi_1a9f3e6273a43842ea067baedf7732264c" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_spherical_model_multi_1a9f3e6273a43842ea067baedf7732264c" kindref="member">gen_point</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Emin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Emax,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Kmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Kmax,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">&amp;<sp/>ierr);</highlight></codeline>
-<codeline lineno="508"><highlight class="normal"></highlight></codeline>
-<codeline lineno="509"><highlight class="normal"></highlight></codeline>
-<codeline lineno="511"><highlight class="normal"></highlight></codeline>
-<codeline lineno="512" refid="class_spherical_model_multi_1aac8d0925f289c6fe836aec5542371de0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1aac8d0925f289c6fe836aec5542371de0" kindref="member">set_min_radius</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>r)<sp/>{<sp/><ref refid="class_spherical_model_multi_1a5e007384579bc0761340eb38bec0ce53" kindref="member">rmin_gen</ref><sp/>=<sp/>r;<sp/>}</highlight></codeline>
-<codeline lineno="513" refid="class_spherical_model_multi_1aecea27b51fc62f4b286369cd19d8f663" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1aecea27b51fc62f4b286369cd19d8f663" kindref="member">set_max_radius</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;<sp/>r)<sp/>{<sp/><ref refid="class_spherical_model_multi_1a528e9d4bfd048a6660c2e6a337c9c53c" kindref="member">rmax_gen</ref><sp/>=<sp/>r;<sp/>}</highlight></codeline>
-<codeline lineno="515"></codeline>
-<codeline lineno="518" refid="class_spherical_model_multi_1a3ba9d735e61c36aeba1ff1efa7a2aa5f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_model_multi_1a3ba9d735e61c36aeba1ff1efa7a2aa5f" kindref="member">allowNegativeMass</ref>()<sp/>{<sp/><ref refid="class_spherical_model_multi_1a4f273d3d7c197960a73cee2e9801121e" kindref="member">noneg</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="519"><highlight class="normal"></highlight></codeline>
-<codeline lineno="520"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="521"><highlight class="normal"></highlight></codeline>
-<codeline lineno="522" refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="massmodel_8_h_1aac4799d0ccf81c7d4e70a08db68b0bd5" kindref="member">AxiSymModPtr</ref>;</highlight></codeline>
-<codeline lineno="523" refid="massmodel_8_h_1a3b5cbef7099eb404794ee3757b4173c5" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;EmbeddedDiskModel&gt;<sp/><sp/><sp/><ref refid="massmodel_8_h_1a3b5cbef7099eb404794ee3757b4173c5" kindref="member">EmbDiskModPtr</ref>;</highlight></codeline>
-<codeline lineno="524" refid="massmodel_8_h_1ab083c5a53e65a3de93fdedd49770600d" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;SphericalModelMulti&gt;<sp/><ref refid="massmodel_8_h_1ab083c5a53e65a3de93fdedd49770600d" kindref="member">SphModMultPtr</ref>;</highlight></codeline>
-<codeline lineno="525" refid="massmodel_8_h_1a30c7b68deea71f1b058c78ee1f7f0c14" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>std::shared_ptr&lt;SphericalModelTable&gt;<sp/><ref refid="massmodel_8_h_1a30c7b68deea71f1b058c78ee1f7f0c14" kindref="member">SphModTblPtr</ref>;</highlight></codeline>
-<codeline lineno="526"><highlight class="normal"></highlight></codeline>
-<codeline lineno="527"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="_q_p_dist_f_8_h" kindref="compound">QPDistF.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="528"><highlight class="normal"></highlight></codeline>
-<codeline lineno="529"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/massmodel.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/mestel_8_h.xml b/doxyxml/mestel_8_h.xml
deleted file mode 100644
index 4ef0e16..0000000
--- a/doxyxml/mestel_8_h.xml
+++ /dev/null
@@ -1,248 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="mestel_8_h" kind="file" language="C++">
-    <compoundname>mestel.H</compoundname>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
-      <node id="20">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
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-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
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-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
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-        <childnode refid="7" relation="include">
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-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/mestel.H</label>
-        <link refid="mestel_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="18">
-        <label>cstdlib</label>
-      </node>
-      <node id="8">
-        <label>deque</label>
-      </node>
-      <node id="13">
-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
-      </node>
-      <node id="15">
-        <label>iostream</label>
-      </node>
-      <node id="10">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="5">
-        <label>random</label>
-      </node>
-      <node id="17">
-        <label>sstream</label>
-      </node>
-      <node id="11">
-        <label>string</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_mestel_disk" prot="public">MestelDisk</innerclass>
-    <innerclass refid="class_tapered_mestel_disk" prot="public">TaperedMestelDisk</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_mestel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_mestel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="class_mestel_disk" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_mestel_disk" kindref="compound">MestelDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="8"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="11" refid="class_mestel_disk_1a9c840743e6af99359305d3490b54fec0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1a9c840743e6af99359305d3490b54fec0" kindref="member">vrot</ref>;</highlight></codeline>
-<codeline lineno="12" refid="class_mestel_disk_1add1c9d6d45f3b25ba64b411b8545b5b5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1add1c9d6d45f3b25ba64b411b8545b5b5" kindref="member">rot</ref>;</highlight></codeline>
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-<codeline lineno="17" refid="class_mestel_disk_1a87a747c435e0e1740f1d17c32b770742" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1a87a747c435e0e1740f1d17c32b770742" kindref="member">F</ref>;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_mestel_disk_1a490ef57d0a14dd806d23a55ada6df9b7" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_mestel_disk_1a490ef57d0a14dd806d23a55ada6df9b7" kindref="member">MestelDisk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>VROT<sp/>=<sp/>1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMIN<sp/>=<sp/>1.0e-6,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX<sp/>=<sp/>1.0e6);</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_mestel_disk_1aa7b4889464c31555a3827e54edd1ae0d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1aa7b4889464c31555a3827e54edd1ae0d" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_mestel_disk_1a29c3230f2e6e415237a6a87831ad9d6a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1a29c3230f2e6e415237a6a87831ad9d6a" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_mestel_disk_1a71dfc91bc5793d2d0d6d528a307d2243" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1a71dfc91bc5793d2d0d6d528a307d2243" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="36" refid="class_mestel_disk_1aef5c4ba2c866fc0a0a8aebff3644418d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1aef5c4ba2c866fc0a0a8aebff3644418d" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_mestel_disk_1aa3d39ee36955b124edfa768f79a5f2d2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1aa3d39ee36955b124edfa768f79a5f2d2" kindref="member">setup_df</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sigma);</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_mestel_disk_1a169af93ecbedfdd0b42e79463055adf9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1a169af93ecbedfdd0b42e79463055adf9" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_mestel_disk_1ac5915664d0690e8d2a487540ce06501a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1ac5915664d0690e8d2a487540ce06501a" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_mestel_disk_1ad743a23293683bff020b2c47facf30b2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1ad743a23293683bff020b2c47facf30b2" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_mestel_disk_1a0cd32b3001517e2173f1d14e9f011ae3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk_1a0cd32b3001517e2173f1d14e9f011ae3" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_tapered_mestel_disk" refkind="compound"><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_tapered_mestel_disk" kindref="compound">TaperedMestelDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_mestel_disk" kindref="compound">MestelDisk</ref></highlight></codeline>
-<codeline lineno="61"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_tapered_mestel_disk_1acc9d4272ee19107fe3da3c489ad84607" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;Linear1d&gt;<sp/><ref refid="class_tapered_mestel_disk_1acc9d4272ee19107fe3da3c489ad84607" kindref="member">interp</ref>;</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="68" refid="class_tapered_mestel_disk_1a2c1bb44b22a237753bd5b37299ca4f57" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a12e8d3ac4edfffd8547d8df45e75b748" kindref="member">nu</ref>,<sp/><ref refid="class_tapered_mestel_disk_1a2c1bb44b22a237753bd5b37299ca4f57" kindref="member">mu</ref>;</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_tapered_mestel_disk_1a50e455e8deab1728807a27bbf3c78d8c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a50e455e8deab1728807a27bbf3c78d8c" kindref="member">Ri</ref>;</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_tapered_mestel_disk_1aef7d4b85b9257ad671900cce0532d074" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1aef7d4b85b9257ad671900cce0532d074" kindref="member">Ro</ref>;</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="class_tapered_mestel_disk_1a82d24f7d3dae19f3326ad5a18ee5dd71" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a82d24f7d3dae19f3326ad5a18ee5dd71" kindref="member">Tifac</ref>,<sp/><ref refid="class_tapered_mestel_disk_1a0e85593d37bc0e37f6ae01d1624ce362" kindref="member">Tofac</ref>;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="80" refid="class_tapered_mestel_disk_1a8e1e2e7489cef0d36b9d035836f879e7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a8e1e2e7489cef0d36b9d035836f879e7" kindref="member">Tinner</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Jp);</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83" refid="class_tapered_mestel_disk_1af683b7a53bfa11899bf6a3953e9e906f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1af683b7a53bfa11899bf6a3953e9e906f" kindref="member">Touter</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Jp);</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_tapered_mestel_disk_1aba2518f9b3002f0decf3dbbbf4fb62e6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1aba2518f9b3002f0decf3dbbbf4fb62e6" kindref="member">dTinner</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Jp);</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="class_tapered_mestel_disk_1abce114224a11c438fa0b8103bc470afb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1abce114224a11c438fa0b8103bc470afb" kindref="member">dTouter</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Jp);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94" refid="class_tapered_mestel_disk_1a950793aa7900fb01a7ade5cd65544b47" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_tapered_mestel_disk_1a950793aa7900fb01a7ade5cd65544b47" kindref="member">TaperedMestelDisk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a12e8d3ac4edfffd8547d8df45e75b748" kindref="member">nu</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a2c1bb44b22a237753bd5b37299ca4f57" kindref="member">mu</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a50e455e8deab1728807a27bbf3c78d8c" kindref="member">Ri</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1aef7d4b85b9257ad671900cce0532d074" kindref="member">Ro</ref>,</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>VROT<sp/>=<sp/>1.0,<sp/></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMIN<sp/>=<sp/>1.0e-6,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX<sp/>=<sp/>1.0e6);</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="99" refid="class_tapered_mestel_disk_1a1b18fe2e00fd489f8e08dfe958e612cb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a1b18fe2e00fd489f8e08dfe958e612cb" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="102" refid="class_tapered_mestel_disk_1a64fdc1f995e140df8bb8d7172cb5bc95" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a64fdc1f995e140df8bb8d7172cb5bc95" kindref="member">get_mass</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>R);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"></highlight></codeline>
-<codeline lineno="107" refid="class_tapered_mestel_disk_1a24836328a2a4a9357f5ef3c7fc326d72" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a24836328a2a4a9357f5ef3c7fc326d72" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109" refid="class_tapered_mestel_disk_1ad985eb7201634305edce026a81424095" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1ad985eb7201634305edce026a81424095" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_tapered_mestel_disk_1a1debf27dd5007ea752970e8965eac9ff" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a1debf27dd5007ea752970e8965eac9ff" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="113" refid="class_tapered_mestel_disk_1a5fe0190b190d5026952fef9731e45208" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_tapered_mestel_disk_1a5fe0190b190d5026952fef9731e45208" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/mestel.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/model2d_8_h.xml b/doxyxml/model2d_8_h.xml
deleted file mode 100644
index 7cf22f4..0000000
--- a/doxyxml/model2d_8_h.xml
+++ /dev/null
@@ -1,93 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="model2d_8_h" kind="file" language="C++">
-    <compoundname>model2d.H</compoundname>
-    <sectiondef kind="enum">
-      <memberdef kind="enum" id="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4b" prot="public" static="no" strong="no">
-        <type></type>
-        <name>Models2d</name>
-        <enumvalue id="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4baaac18216416353f222c8e9952fa354db" prot="public">
-          <name>mestel</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4ba76d6b02dfc2c1793366935cee73c587d" prot="public">
-          <name>toomre</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4ba03761004bc1d07c87a487488f682b672" prot="public">
-          <name>expon</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4ba7bd1f052ce292c188f34a60dd7a1a8ec" prot="public">
-          <name>kalnajs</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4bade106ff7a0c91f9ee415a160c52fabb0" prot="public">
-          <name>hunter</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4baa63611931b616751e35d4ec69fac8c4e" prot="public">
-          <name>hunterx</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/model2d.H" line="4" column="1" bodyfile="/home/weinberg/Projects/EXP/include/model2d.H" bodystart="4" bodyend="4"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="var">
-      <memberdef kind="variable" id="model2d_8_h_1a170ae1dc16d0f06d1593aa7e252e8837" prot="public" static="yes" mutable="no">
-        <type>string</type>
-        <definition>string Model2dNames[]</definition>
-        <argsstring>[]</argsstring>
-        <name>Model2dNames</name>
-        <initializer>= {&quot;Mestel&quot;, &quot;Toomre&quot;, &quot;Exponential&quot;, &quot;Kalnajs&quot;,
-				&quot;Hunter&quot;, &quot;HunterX&quot;}</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/model2d.H" line="5" column="15" bodyfile="/home/weinberg/Projects/EXP/include/model2d.H" bodystart="5" bodyend="6"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Models2d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Models2d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4" refid="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4ba03761004bc1d07c87a487488f682b672" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4b" kindref="member">Models2d</ref><sp/>{<ref refid="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4baaac18216416353f222c8e9952fa354db" kindref="member">mestel</ref>,<sp/><ref refid="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4ba76d6b02dfc2c1793366935cee73c587d" kindref="member">toomre</ref>,<sp/><ref refid="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4ba03761004bc1d07c87a487488f682b672" kindref="member">expon</ref>,<sp/><ref refid="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4ba7bd1f052ce292c188f34a60dd7a1a8ec" kindref="member">kalnajs</ref>,<sp/><ref refid="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4bade106ff7a0c91f9ee415a160c52fabb0" kindref="member">hunter</ref>,<sp/><ref refid="model2d_8_h_1a8356a03e858589d994cc5e9d2a415b4baa63611931b616751e35d4ec69fac8c4e" kindref="member">hunterx</ref>};</highlight></codeline>
-<codeline lineno="5" refid="model2d_8_h_1a170ae1dc16d0f06d1593aa7e252e8837" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal"><sp/><ref refid="model2d_8_h_1a170ae1dc16d0f06d1593aa7e252e8837" kindref="member">Model2dNames</ref>[]<sp/>=<sp/>{</highlight><highlight class="stringliteral">&quot;Mestel&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Toomre&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Exponential&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Kalnajs&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="6"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;Hunter&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;HunterX&quot;</highlight><highlight class="normal">};</highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/model2d.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/model3d_8_h.xml b/doxyxml/model3d_8_h.xml
deleted file mode 100644
index f9de588..0000000
--- a/doxyxml/model3d_8_h.xml
+++ /dev/null
@@ -1,104 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="model3d_8_h" kind="file" language="C++">
-    <compoundname>model3d.H</compoundname>
-    <sectiondef kind="enum">
-      <memberdef kind="enum" id="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63c" prot="public" static="no" strong="no">
-        <type></type>
-        <name>Models3d</name>
-        <enumvalue id="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" prot="public">
-          <name>file</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca29106aac59fe15bc1faaeb9f36b98369" prot="public">
-          <name>isothermal</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca1e3e02a247b0827f53b3857d2391af03" prot="public">
-          <name>sing_isothermal</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca2eaa21639347aa7170b81bd6b045e3f5" prot="public">
-          <name>low_sing_isothermal</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cac0970110dfcc13031371c12b384e5988" prot="public">
-          <name>hernquist_model</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca3d2302023fdfd7af77908fa4c0580176" prot="public">
-          <name>gen_polytrope</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <enumvalue id="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63caa2dc54c26360cd45bf83cb64b7db58b0" prot="public">
-          <name>plummer</name>
-          <briefdescription>
-          </briefdescription>
-          <detaileddescription>
-          </detaileddescription>
-        </enumvalue>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/model3d.H" line="4" column="1" bodyfile="/home/weinberg/Projects/EXP/include/model3d.H" bodystart="4" bodyend="5"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="var">
-      <memberdef kind="variable" id="model3d_8_h_1a243f25dbbf3c1575a542e360dba23f2b" prot="public" static="yes" mutable="no">
-        <type>std::string</type>
-        <definition>std::string Model3dNames[]</definition>
-        <argsstring>[]</argsstring>
-        <name>Model3dNames</name>
-        <initializer>= {&quot;file&quot;, &quot;Isothermal&quot;, &quot;SingIsothermal&quot;,
-				     &quot;LowSingIsothermal&quot;, &quot;Hernquist&quot;, 
-				     &quot;GeneralizedPolytrope&quot;, &quot;PlummerSphere&quot;}</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/model3d.H" line="7" column="20" bodyfile="/home/weinberg/Projects/EXP/include/model3d.H" bodystart="7" bodyend="9"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_Models3d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_Models3d_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4" refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">enum</highlight><highlight class="normal"><sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63c" kindref="member">Models3d</ref><sp/>{<ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cab4e367fba14b5eae38519a2823aca793" kindref="member">file</ref>,<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca29106aac59fe15bc1faaeb9f36b98369" kindref="member">isothermal</ref>,<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca1e3e02a247b0827f53b3857d2391af03" kindref="member">sing_isothermal</ref>,<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca2eaa21639347aa7170b81bd6b045e3f5" kindref="member">low_sing_isothermal</ref>,<sp/></highlight></codeline>
-<codeline lineno="5" refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca3d2302023fdfd7af77908fa4c0580176" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63cac0970110dfcc13031371c12b384e5988" kindref="member">hernquist_model</ref>,<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63ca3d2302023fdfd7af77908fa4c0580176" kindref="member">gen_polytrope</ref>,<sp/><ref refid="model3d_8_h_1ab6fca3418c4b6179d83a8991a8b2f63caa2dc54c26360cd45bf83cb64b7db58b0" kindref="member">plummer</ref>};</highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="model3d_8_h_1a243f25dbbf3c1575a542e360dba23f2b" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>std::string<sp/><ref refid="model3d_8_h_1a243f25dbbf3c1575a542e360dba23f2b" kindref="member">Model3dNames</ref>[]<sp/>=<sp/>{</highlight><highlight class="stringliteral">&quot;file&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Isothermal&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;SingIsothermal&quot;</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;LowSingIsothermal&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;Hernquist&quot;</highlight><highlight class="normal">,<sp/></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;GeneralizedPolytrope&quot;</highlight><highlight class="normal">,<sp/></highlight><highlight class="stringliteral">&quot;PlummerSphere&quot;</highlight><highlight class="normal">};</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/model3d.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/models_8_h.xml b/doxyxml/models_8_h.xml
deleted file mode 100644
index 23bfd05..0000000
--- a/doxyxml/models_8_h.xml
+++ /dev/null
@@ -1,304 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="models_8_h" kind="file" language="C++">
-    <compoundname>models.H</compoundname>
-    <includes local="no">Eigen/Eigen</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/models.H</label>
-        <link refid="models_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Eigen/Eigen</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_hernquist" prot="public">Hernquist</innerclass>
-    <innerclass refid="class_isothermal" prot="public">Isothermal</innerclass>
-    <innerclass refid="class_logarithmic" prot="public">Logarithmic</innerclass>
-    <innerclass refid="class_miyamoto" prot="public">Miyamoto</innerclass>
-    <innerclass refid="class_miyamoto___needle" prot="public">Miyamoto_Needle</innerclass>
-    <innerclass refid="class_modified___hubble" prot="public">Modified_Hubble</innerclass>
-    <innerclass refid="class_needle" prot="public">Needle</innerclass>
-    <innerclass refid="class_plummer" prot="public">Plummer</innerclass>
-    <innerclass refid="class_point___quadrupole" prot="public">Point_Quadrupole</innerclass>
-    <innerclass refid="class_quadrupole___bar" prot="public">Quadrupole_Bar</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_models_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_models_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_miyamoto" kindref="compound">Miyamoto</ref>;</highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_isothermal" kindref="compound">Isothermal</ref>;</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_hernquist" kindref="compound">Hernquist</ref>;</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_needle" kindref="compound">Needle</ref>;</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_miyamoto___needle" kindref="compound">Miyamoto_Needle</ref>;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_modified___hubble" kindref="compound">Modified_Hubble</ref>;</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_quadrupole___bar" kindref="compound">Quadrupole_Bar</ref>;</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="comment">/*</highlight></codeline>
-<codeline lineno="16"><highlight class="comment"><sp/><sp/>class<sp/>definitions<sp/>for<sp/>galactic<sp/>components<sp/></highlight></codeline>
-<codeline lineno="17"><highlight class="comment">*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_miyamoto" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_miyamoto" kindref="compound">Miyamoto</ref></highlight></codeline>
-<codeline lineno="20"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="22" refid="class_miyamoto_1a932e6098560be69a5dc741e560dab5ad" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a932e6098560be69a5dc741e560dab5ad" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_miyamoto_1a9b044b0eb7e7b772236f1b6e1fb525f7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a9b044b0eb7e7b772236f1b6e1fb525f7" kindref="member">b</ref>;</highlight></codeline>
-<codeline lineno="24" refid="class_miyamoto_1a8059ff40989e7bcf57866f6502cd59f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a8059ff40989e7bcf57866f6502cd59f2" kindref="member">GM</ref>;</highlight></codeline>
-<codeline lineno="25" refid="class_miyamoto_1ac906484e4d6868b649d9be7439b7e86d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1ac906484e4d6868b649d9be7439b7e86d" kindref="member">G</ref>;</highlight></codeline>
-<codeline lineno="26" refid="class_miyamoto_1a440224af6044d02e0c3e55c65de09d28" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a440224af6044d02e0c3e55c65de09d28" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="29" refid="class_miyamoto_1a2cf9d9dc3fef32ea99a65ea8eb1ab419" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a2cf9d9dc3fef32ea99a65ea8eb1ab419" kindref="member">set_Miyamoto</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ainit,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>binit,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Ginit,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Minit)</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto_1a932e6098560be69a5dc741e560dab5ad" kindref="member">a</ref><sp/>=<sp/>ainit;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto_1a9b044b0eb7e7b772236f1b6e1fb525f7" kindref="member">b</ref><sp/>=<sp/>binit;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto_1ac906484e4d6868b649d9be7439b7e86d" kindref="member">G</ref><sp/>=<sp/>Ginit;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto_1a440224af6044d02e0c3e55c65de09d28" kindref="member">M</ref><sp/>=<sp/>Minit;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto_1a8059ff40989e7bcf57866f6502cd59f2" kindref="member">GM</ref><sp/>=<sp/><ref refid="class_miyamoto_1ac906484e4d6868b649d9be7439b7e86d" kindref="member">G</ref>*<ref refid="class_miyamoto_1a440224af6044d02e0c3e55c65de09d28" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="37" refid="class_miyamoto_1a74c063db93945ba82bb095467f1be2c5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a74c063db93945ba82bb095467f1be2c5" kindref="member">set_a</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>aa)<sp/>{<ref refid="class_miyamoto_1a932e6098560be69a5dc741e560dab5ad" kindref="member">a</ref>=aa;}</highlight></codeline>
-<codeline lineno="38" refid="class_miyamoto_1a70b56a69b0c1431da15fa5d955cc7688" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a70b56a69b0c1431da15fa5d955cc7688" kindref="member">set_b</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>bb)<sp/>{<ref refid="class_miyamoto_1a9b044b0eb7e7b772236f1b6e1fb525f7" kindref="member">b</ref>=bb;}</highlight></codeline>
-<codeline lineno="39" refid="class_miyamoto_1a16ef1324e61443dc0f00c9cc33ae3fe5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a16ef1324e61443dc0f00c9cc33ae3fe5" kindref="member">set_M</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m)<sp/>{<ref refid="class_miyamoto_1a440224af6044d02e0c3e55c65de09d28" kindref="member">M</ref>=m;<sp/><ref refid="class_miyamoto_1a8059ff40989e7bcf57866f6502cd59f2" kindref="member">GM</ref>=<ref refid="class_miyamoto_1ac906484e4d6868b649d9be7439b7e86d" kindref="member">G</ref>*<ref refid="class_miyamoto_1a440224af6044d02e0c3e55c65de09d28" kindref="member">M</ref>;}</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="41" refid="class_miyamoto_1a42528618b3c9a427034bdeb143565137" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a42528618b3c9a427034bdeb143565137" kindref="member">get_a</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a932e6098560be69a5dc741e560dab5ad" kindref="member">a</ref>;}</highlight></codeline>
-<codeline lineno="42" refid="class_miyamoto_1a4e34d4a9df1c5820c8c7f995bc258bba" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a4e34d4a9df1c5820c8c7f995bc258bba" kindref="member">get_b</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a9b044b0eb7e7b772236f1b6e1fb525f7" kindref="member">b</ref>;}</highlight></codeline>
-<codeline lineno="43" refid="class_miyamoto_1a7c0c53fd1c212c65f22fe4e8064210a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a7c0c53fd1c212c65f22fe4e8064210a7" kindref="member">get_M</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a440224af6044d02e0c3e55c65de09d28" kindref="member">M</ref>;}</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="46" refid="class_miyamoto_1ac20f8bbc7c60cadbed5af643d9955f2e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_miyamoto_1ac20f8bbc7c60cadbed5af643d9955f2e" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="47" refid="class_miyamoto_1a4ab9320e51bbba1ad28d9c9ed83c8d33" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto_1a4ab9320e51bbba1ad28d9c9ed83c8d33" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="48"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_isothermal" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_isothermal" kindref="compound">Isothermal</ref></highlight></codeline>
-<codeline lineno="52"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="54" refid="class_isothermal_1a3cb8cd4438dce94dc4df07b3d466238b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_1a3cb8cd4438dce94dc4df07b3d466238b" kindref="member">r0</ref>;</highlight></codeline>
-<codeline lineno="55" refid="class_isothermal_1a0a7901c7a674db1d6d07cf415e2daf0e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_1a0a7901c7a674db1d6d07cf415e2daf0e" kindref="member">vc</ref>;</highlight></codeline>
-<codeline lineno="56" refid="class_isothermal_1a9e1b4b7f27352df65d5d7881cdac2569" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_1a9e1b4b7f27352df65d5d7881cdac2569" kindref="member">vcsq</ref>;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="58" refid="class_isothermal_1a9e7356929e282e3077531a3be1de2226" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_1a9e7356929e282e3077531a3be1de2226" kindref="member">set_Isothermal</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r0init,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>vcinit)</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_isothermal_1a3cb8cd4438dce94dc4df07b3d466238b" kindref="member">r0</ref><sp/>=<sp/>r0init;</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_isothermal_1a0a7901c7a674db1d6d07cf415e2daf0e" kindref="member">vc</ref><sp/>=<sp/>vcinit;</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_isothermal_1a9e1b4b7f27352df65d5d7881cdac2569" kindref="member">vcsq</ref><sp/>=<sp/><ref refid="class_isothermal_1a0a7901c7a674db1d6d07cf415e2daf0e" kindref="member">vc</ref>*<ref refid="class_isothermal_1a0a7901c7a674db1d6d07cf415e2daf0e" kindref="member">vc</ref>;</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="65" refid="class_isothermal_1a1aa556d635c1000cf91b28015677d33c" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_isothermal_1a1aa556d635c1000cf91b28015677d33c" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="66" refid="class_isothermal_1a2fe32e8f3d44852e5c7f43c35e3f8473" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_isothermal_1a2fe32e8f3d44852e5c7f43c35e3f8473" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="67"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_hernquist" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_hernquist" kindref="compound">Hernquist</ref></highlight></codeline>
-<codeline lineno="71"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="73" refid="class_hernquist_1a8d8452cfaafd9798b83cd1c2b98f94b3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_1a8d8452cfaafd9798b83cd1c2b98f94b3" kindref="member">r0</ref>;</highlight></codeline>
-<codeline lineno="74" refid="class_hernquist_1a9efabc87e5d9ff1f26ab9bbe59f75c9c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_1a9efabc87e5d9ff1f26ab9bbe59f75c9c" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="75" refid="class_hernquist_1a248e980ca253c00b56620c4bc74b9af9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_1a248e980ca253c00b56620c4bc74b9af9" kindref="member">G</ref>;</highlight></codeline>
-<codeline lineno="76" refid="class_hernquist_1ae4bb107309f01c47fc8b63de5e0dcb36" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_1ae4bb107309f01c47fc8b63de5e0dcb36" kindref="member">GM</ref>;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="78" refid="class_hernquist_1a66800c4e57c5018740d7248905af89e7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_1a66800c4e57c5018740d7248905af89e7" kindref="member">set_Hernquist</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r0init,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Ginit,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Minit)</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_hernquist_1a8d8452cfaafd9798b83cd1c2b98f94b3" kindref="member">r0</ref><sp/>=<sp/>r0init;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_hernquist_1a248e980ca253c00b56620c4bc74b9af9" kindref="member">G</ref><sp/>=<sp/>Ginit;</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_hernquist_1a9efabc87e5d9ff1f26ab9bbe59f75c9c" kindref="member">M</ref><sp/>=<sp/>Minit;</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_hernquist_1ae4bb107309f01c47fc8b63de5e0dcb36" kindref="member">GM</ref><sp/>=<sp/><ref refid="class_hernquist_1a248e980ca253c00b56620c4bc74b9af9" kindref="member">G</ref>*<ref refid="class_hernquist_1a9efabc87e5d9ff1f26ab9bbe59f75c9c" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="86" refid="class_hernquist_1a378b878308f19b1746ebc56a452c8d49" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_hernquist_1a378b878308f19b1746ebc56a452c8d49" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="87" refid="class_hernquist_1a56cf9608f4604bbede9f678a59b1d65e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_hernquist_1a56cf9608f4604bbede9f678a59b1d65e" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="88"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight></codeline>
-<codeline lineno="91" refid="class_logarithmic" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_logarithmic" kindref="compound">Logarithmic</ref></highlight></codeline>
-<codeline lineno="92"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="93"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="94" refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" kindref="member">vc</ref>;</highlight></codeline>
-<codeline lineno="95" refid="class_logarithmic_1aeda40f0b3caf40e8a1d62ffbebeca15c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1aeda40f0b3caf40e8a1d62ffbebeca15c" kindref="member">vcsq</ref>;</highlight></codeline>
-<codeline lineno="96" refid="class_logarithmic_1a1ab4020740e6c8ae2c817979393ffc0f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1acea95b1a8f95a26022ca0d76d61077a9" kindref="member">r0</ref>,<sp/><ref refid="class_logarithmic_1a1ab4020740e6c8ae2c817979393ffc0f" kindref="member">qy</ref>,<sp/><ref refid="class_logarithmic_1a4eb30bf19420aa36b4ae36b94cf9fd89" kindref="member">qz</ref>;</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="98" refid="class_logarithmic_1a9b22631d654a47b66972a9b27564db0f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1a9b22631d654a47b66972a9b27564db0f" kindref="member">set_Logarithmic</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r0init,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>vcinit,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>qyinit,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>qzinit)</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_logarithmic_1acea95b1a8f95a26022ca0d76d61077a9" kindref="member">r0</ref><sp/>=<sp/>r0init;</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_logarithmic_1a1ab4020740e6c8ae2c817979393ffc0f" kindref="member">qy</ref><sp/>=<sp/>qyinit;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_logarithmic_1a4eb30bf19420aa36b4ae36b94cf9fd89" kindref="member">qz</ref><sp/>=<sp/>qzinit;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" kindref="member">vc</ref><sp/>=<sp/>vcinit;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_logarithmic_1aeda40f0b3caf40e8a1d62ffbebeca15c" kindref="member">vcsq</ref><sp/>=<sp/><ref refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" kindref="member">vc</ref>*<ref refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" kindref="member">vc</ref>;</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="106" refid="class_logarithmic_1a157de3f08ff0ad9104c2a6de3a143ce7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1a157de3f08ff0ad9104c2a6de3a143ce7" kindref="member">set_vc</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>v)<sp/>{<ref refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" kindref="member">vc</ref><sp/>=<sp/>v;<sp/><ref refid="class_logarithmic_1aeda40f0b3caf40e8a1d62ffbebeca15c" kindref="member">vcsq</ref>=<ref refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" kindref="member">vc</ref>*<ref refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" kindref="member">vc</ref>;}</highlight></codeline>
-<codeline lineno="107" refid="class_logarithmic_1a1fd639eb35be83c03ca9c815fc7a60ec" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1a1fd639eb35be83c03ca9c815fc7a60ec" kindref="member">set_r0</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<ref refid="class_logarithmic_1acea95b1a8f95a26022ca0d76d61077a9" kindref="member">r0</ref><sp/>=<sp/>r;}</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="109" refid="class_logarithmic_1a91b20e15fa8e05b1a8555db00129ad37" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1a91b20e15fa8e05b1a8555db00129ad37" kindref="member">get_vc</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1ab799616b226dcce7655131cbd4c5e3dc" kindref="member">vc</ref>;}</highlight></codeline>
-<codeline lineno="110" refid="class_logarithmic_1a3cc9a01d9c29b720d8ba28b1f10677b7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1a3cc9a01d9c29b720d8ba28b1f10677b7" kindref="member">get_r0</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1acea95b1a8f95a26022ca0d76d61077a9" kindref="member">r0</ref>;}</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="112" refid="class_logarithmic_1a6eb9da74565f0c516607edeaf7a3c901" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_logarithmic_1a6eb9da74565f0c516607edeaf7a3c901" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="113" refid="class_logarithmic_1aa59843a8425684d80b763133aefcc73b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_logarithmic_1aa59843a8425684d80b763133aefcc73b" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="114"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117" refid="class_plummer" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_plummer" kindref="compound">Plummer</ref></highlight></codeline>
-<codeline lineno="118"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="120" refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" kindref="member">r0</ref>,<sp/><ref refid="class_plummer_1a52b35f16b516240494ffc0e08bb5da12" kindref="member">r2</ref>,<sp/><ref refid="class_plummer_1a13ea06b0837614fb5c607248294d9adb" kindref="member">r3</ref>;</highlight></codeline>
-<codeline lineno="121" refid="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" kindref="member">G</ref>,<sp/><ref refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" kindref="member">M</ref>,<sp/><ref refid="class_plummer_1abcb005aba1f32212cc20cca5a0c50902" kindref="member">GM</ref>;</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="123" refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1a17dd3422260a716f89872bc7ab2bed99" kindref="member">set_Plummer</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>g,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m)</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" kindref="member">G</ref><sp/>=<sp/>g;</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" kindref="member">M</ref><sp/>=<sp/>m;</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_1abcb005aba1f32212cc20cca5a0c50902" kindref="member">GM</ref><sp/>=<sp/><ref refid="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" kindref="member">G</ref>*<ref refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" kindref="member">r0</ref><sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_1a52b35f16b516240494ffc0e08bb5da12" kindref="member">r2</ref><sp/>=<sp/>r*r;</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_1a13ea06b0837614fb5c607248294d9adb" kindref="member">r3</ref><sp/>=<sp/>r*r*r;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="133" refid="class_plummer_1a16ea90e9a9319a175b68a933d870ff81" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1a16ea90e9a9319a175b68a933d870ff81" kindref="member">set_M</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m)<sp/>{<ref refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" kindref="member">M</ref>=m;<sp/><ref refid="class_plummer_1abcb005aba1f32212cc20cca5a0c50902" kindref="member">GM</ref>=<ref refid="class_plummer_1aa2a1b4a1c4cb0841a0ae1c64e744e4fe" kindref="member">G</ref>*<ref refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" kindref="member">M</ref>;}</highlight></codeline>
-<codeline lineno="134" refid="class_plummer_1aaddf34566682ddde31947be6bfc12837" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1aaddf34566682ddde31947be6bfc12837" kindref="member">set_r0</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<ref refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" kindref="member">r0</ref>=r;<sp/><ref refid="class_plummer_1a52b35f16b516240494ffc0e08bb5da12" kindref="member">r2</ref>=r*r;<sp/><ref refid="class_plummer_1a13ea06b0837614fb5c607248294d9adb" kindref="member">r3</ref>=r*r*r;}</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="136" refid="class_plummer_1a2876fc4e3134198461a375818cc817ed" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1a2876fc4e3134198461a375818cc817ed" kindref="member">get_M</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1aa79c6cbb4b15e357554d3797c7a3bd5b" kindref="member">M</ref>;}</highlight></codeline>
-<codeline lineno="137" refid="class_plummer_1a1ad6daa45ed07c9edc735bf174f8ef15" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1a1ad6daa45ed07c9edc735bf174f8ef15" kindref="member">get_r0</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1ac7df5e8840e6ba5a1bc8e5b3c0c58590" kindref="member">r0</ref>;}</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="140" refid="class_plummer_1a94e8e5e21cadb412388b65df80d631f2" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_plummer_1a94e8e5e21cadb412388b65df80d631f2" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="141" refid="class_plummer_1a5dabf4d5417437a12bb4be656fbb0960" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_1a5dabf4d5417437a12bb4be656fbb0960" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="142"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight></codeline>
-<codeline lineno="144"><highlight class="normal"></highlight></codeline>
-<codeline lineno="145"><highlight class="normal"></highlight></codeline>
-<codeline lineno="146"><highlight class="normal"></highlight></codeline>
-<codeline lineno="147"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148"><highlight class="normal"></highlight></codeline>
-<codeline lineno="149" refid="class_needle" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_needle" kindref="compound">Needle</ref></highlight></codeline>
-<codeline lineno="150"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:<sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="152" refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref>,<sp/><ref refid="class_needle_1acccc70f01c9ae06877af1ea8d353b5ee" kindref="member">b</ref>;</highlight></codeline>
-<codeline lineno="153" refid="class_needle_1adaceee367efcdcdef413cc06a7109993" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_needle_1adaceee367efcdcdef413cc06a7109993" kindref="member">G</ref>,<sp/><ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref>,<sp/><ref refid="class_needle_1a186ec11513dc8467b1a784e70d5a357c" kindref="member">k</ref>,<sp/><ref refid="class_needle_1a1118a299c0e2885c943b3c5ec0c10568" kindref="member">kf</ref>;</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="155" refid="class_needle_1a29fc9818b2ddd13c112eed5efcb8c317" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_needle_1a29fc9818b2ddd13c112eed5efcb8c317" kindref="member">set_Needle</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>aa,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>bb,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>gg,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mm)</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref><sp/>=<sp/>aa;</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_needle_1acccc70f01c9ae06877af1ea8d353b5ee" kindref="member">b</ref><sp/>=<sp/>bb;</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_needle_1adaceee367efcdcdef413cc06a7109993" kindref="member">G</ref><sp/>=<sp/>gg;</highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref><sp/>=<sp/>mm;</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref><sp/>&gt;<sp/><ref refid="numerical_8_h_1acf1c38f71f39386356edb151a131ad11" kindref="member">TINY</ref>)<sp/><ref refid="class_needle_1a186ec11513dc8467b1a784e70d5a357c" kindref="member">k</ref><sp/>=<sp/><ref refid="class_needle_1adaceee367efcdcdef413cc06a7109993" kindref="member">G</ref>*<ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref>/2.0/<ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_needle_1a1118a299c0e2885c943b3c5ec0c10568" kindref="member">kf</ref><sp/>=<sp/><ref refid="class_needle_1adaceee367efcdcdef413cc06a7109993" kindref="member">G</ref>*<ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref>/2.0;</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="165" refid="class_needle_1accee337e6efab3da6bdae66686765b98" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_needle_1accee337e6efab3da6bdae66686765b98" kindref="member">set_a</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>aa)<sp/>{<ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref>=aa;<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref><sp/>&gt;<sp/><ref refid="numerical_8_h_1acf1c38f71f39386356edb151a131ad11" kindref="member">TINY</ref>)<sp/><ref refid="class_needle_1a186ec11513dc8467b1a784e70d5a357c" kindref="member">k</ref><sp/>=<sp/><ref refid="class_needle_1adaceee367efcdcdef413cc06a7109993" kindref="member">G</ref>*<ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref>/2.0/<ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref>;}</highlight></codeline>
-<codeline lineno="166" refid="class_needle_1a93fefb5e560e21e9751cac48e4c79c78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_needle_1a93fefb5e560e21e9751cac48e4c79c78" kindref="member">set_b</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>bb)<sp/>{<ref refid="class_needle_1acccc70f01c9ae06877af1ea8d353b5ee" kindref="member">b</ref>=bb;}</highlight></codeline>
-<codeline lineno="167" refid="class_needle_1a3c58b0e4135faa95a36e44653d1dfbc0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_needle_1a3c58b0e4135faa95a36e44653d1dfbc0" kindref="member">set_M</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m)<sp/><sp/>{<ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref>=m;<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref>&gt;<ref refid="numerical_8_h_1acf1c38f71f39386356edb151a131ad11" kindref="member">TINY</ref>)<sp/><ref refid="class_needle_1a186ec11513dc8467b1a784e70d5a357c" kindref="member">k</ref>=<ref refid="class_needle_1adaceee367efcdcdef413cc06a7109993" kindref="member">G</ref>*<ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref>/2.0/<ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref>;<sp/><ref refid="class_needle_1a1118a299c0e2885c943b3c5ec0c10568" kindref="member">kf</ref>=<ref refid="class_needle_1adaceee367efcdcdef413cc06a7109993" kindref="member">G</ref>*<ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref>/2.0;}</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="169" refid="class_needle_1ad692ff263e9d90338b9b3052edb3816a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_needle_1ad692ff263e9d90338b9b3052edb3816a" kindref="member">get_a</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_needle_1a73b08442cbfdb92656b65dc6c5f0b8a5" kindref="member">a</ref>;}</highlight></codeline>
-<codeline lineno="170" refid="class_needle_1a3945e9e46b7aa2f89882e40e78b40511" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_needle_1a3945e9e46b7aa2f89882e40e78b40511" kindref="member">get_b</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_needle_1acccc70f01c9ae06877af1ea8d353b5ee" kindref="member">b</ref>;}</highlight></codeline>
-<codeline lineno="171" refid="class_needle_1aacb7c0a8f8535c66db1e66867ccf44ce" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_needle_1aacb7c0a8f8535c66db1e66867ccf44ce" kindref="member">get_M</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_needle_1adbc8ed4f7a31e7bd9c01c60a0e773185" kindref="member">M</ref>;}</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="173" refid="class_needle_1ad1413199d23e7ade41b7357cb886c981" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_needle_1ad1413199d23e7ade41b7357cb886c981" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="174" refid="class_needle_1af8c1d34fd8b10c5f017935b8efaa4135" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_needle_1af8c1d34fd8b10c5f017935b8efaa4135" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="176"><highlight class="normal"></highlight></codeline>
-<codeline lineno="177"><highlight class="normal"></highlight></codeline>
-<codeline lineno="178" refid="class_point___quadrupole" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_point___quadrupole" kindref="compound">Point_Quadrupole</ref></highlight></codeline>
-<codeline lineno="179"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="181" refid="class_point___quadrupole_1ad6ba4029629dc306d4042afac7eec9fb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_point___quadrupole_1ad6ba4029629dc306d4042afac7eec9fb" kindref="member">Q</ref>;</highlight></codeline>
-<codeline lineno="182"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="183" refid="class_point___quadrupole_1a309f55c154d05750fb88ac44cc5692bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_point___quadrupole_1a309f55c154d05750fb88ac44cc5692bc" kindref="member">set_Point_Quadrupole</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>q)</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_point___quadrupole_1ad6ba4029629dc306d4042afac7eec9fb" kindref="member">Q</ref><sp/>=<sp/>q;</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="187" refid="class_point___quadrupole_1a721c875249c387262160929ee2ab850a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_point___quadrupole_1a721c875249c387262160929ee2ab850a" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="188" refid="class_point___quadrupole_1abdf1d2cec50d31ef4e5d9031528535a2" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_point___quadrupole_1abdf1d2cec50d31ef4e5d9031528535a2" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="189"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="192"><highlight class="normal"></highlight></codeline>
-<codeline lineno="193" refid="class_miyamoto___needle" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_miyamoto___needle" kindref="compound">Miyamoto_Needle</ref></highlight></codeline>
-<codeline lineno="194"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:<sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="196" refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref>,<sp/><ref refid="class_miyamoto___needle_1aca10491fe1b74e8150858d8541c6c6ee" kindref="member">b</ref>,<sp/><ref refid="class_miyamoto___needle_1ae2e4b22e405e0b6159b258cd173a1d29" kindref="member">c</ref>;</highlight></codeline>
-<codeline lineno="197" refid="class_miyamoto___needle_1a083a915924f9b5664d6313eda2ffc7bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a083a915924f9b5664d6313eda2ffc7bc" kindref="member">G</ref>,<sp/><ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref>,<sp/><ref refid="class_miyamoto___needle_1a7e500f97c6558c688e7fef174af871c0" kindref="member">k</ref>,<sp/><ref refid="class_miyamoto___needle_1acc265c9a1eb6502afde213d48b5363ce" kindref="member">kf</ref>;</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="199" refid="class_miyamoto___needle_1ad18a39877be750aad8bd13387cf87829" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1ad18a39877be750aad8bd13387cf87829" kindref="member">set_Miyamoto_Needle</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>aa,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>bb,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>cc,<sp/></highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>gg,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>mm)</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref><sp/>=<sp/>aa;</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto___needle_1aca10491fe1b74e8150858d8541c6c6ee" kindref="member">b</ref><sp/>=<sp/>bb;</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto___needle_1ae2e4b22e405e0b6159b258cd173a1d29" kindref="member">c</ref><sp/>=<sp/>cc;</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto___needle_1a083a915924f9b5664d6313eda2ffc7bc" kindref="member">G</ref><sp/>=<sp/>gg;</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref><sp/>=<sp/>mm;</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto___needle_1a7e500f97c6558c688e7fef174af871c0" kindref="member">k</ref><sp/>=<sp/><ref refid="class_miyamoto___needle_1a083a915924f9b5664d6313eda2ffc7bc" kindref="member">G</ref>*<ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref>/2.0/<ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_miyamoto___needle_1acc265c9a1eb6502afde213d48b5363ce" kindref="member">kf</ref><sp/>=<sp/><ref refid="class_miyamoto___needle_1a083a915924f9b5664d6313eda2ffc7bc" kindref="member">G</ref>*<ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref>/2.0;</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="211" refid="class_miyamoto___needle_1ac3121c623baa449d554a1a09baeeae51" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1ac3121c623baa449d554a1a09baeeae51" kindref="member">set_a</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>aa)<sp/>{<ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref>=aa;<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref>&gt;<ref refid="numerical_8_h_1acf1c38f71f39386356edb151a131ad11" kindref="member">TINY</ref>)<sp/><ref refid="class_miyamoto___needle_1a7e500f97c6558c688e7fef174af871c0" kindref="member">k</ref><sp/>=<sp/><ref refid="class_miyamoto___needle_1a083a915924f9b5664d6313eda2ffc7bc" kindref="member">G</ref>*<ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref>/2.0/<ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref>;}</highlight></codeline>
-<codeline lineno="212" refid="class_miyamoto___needle_1aea45744446dcd89dfc9014b9f99f127a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1aea45744446dcd89dfc9014b9f99f127a" kindref="member">set_b</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>bb)<sp/>{<ref refid="class_miyamoto___needle_1aca10491fe1b74e8150858d8541c6c6ee" kindref="member">b</ref>=bb;}</highlight></codeline>
-<codeline lineno="213" refid="class_miyamoto___needle_1a2971bbee1a9cf0e860f59fb2860576be" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a2971bbee1a9cf0e860f59fb2860576be" kindref="member">set_c</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>cc)<sp/>{<ref refid="class_miyamoto___needle_1ae2e4b22e405e0b6159b258cd173a1d29" kindref="member">c</ref>=cc;}</highlight></codeline>
-<codeline lineno="214" refid="class_miyamoto___needle_1a696731f4fefae1915c2396af296700f0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a696731f4fefae1915c2396af296700f0" kindref="member">set_M</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m)<sp/><sp/>{<ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref>=m;<sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref>&gt;<ref refid="numerical_8_h_1acf1c38f71f39386356edb151a131ad11" kindref="member">TINY</ref>)<sp/><ref refid="class_miyamoto___needle_1a7e500f97c6558c688e7fef174af871c0" kindref="member">k</ref>=<ref refid="class_miyamoto___needle_1a083a915924f9b5664d6313eda2ffc7bc" kindref="member">G</ref>*<ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref>/2.0/<ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref>;<sp/><ref refid="class_miyamoto___needle_1acc265c9a1eb6502afde213d48b5363ce" kindref="member">kf</ref>=<ref refid="class_miyamoto___needle_1a083a915924f9b5664d6313eda2ffc7bc" kindref="member">G</ref>*<ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref>/2.0;}</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="216" refid="class_miyamoto___needle_1a942b5c3107906746967574e8e26ee22f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a942b5c3107906746967574e8e26ee22f" kindref="member">get_a</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1adb6dca8be3480ce2d1d7ab5355ae8269" kindref="member">a</ref>;}</highlight></codeline>
-<codeline lineno="217" refid="class_miyamoto___needle_1a54aefca00fc5b33b63f155308dd660ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a54aefca00fc5b33b63f155308dd660ac" kindref="member">get_b</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1aca10491fe1b74e8150858d8541c6c6ee" kindref="member">b</ref>;}</highlight></codeline>
-<codeline lineno="218" refid="class_miyamoto___needle_1a38c4895fea128a794e447fff5bbc09a9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a38c4895fea128a794e447fff5bbc09a9" kindref="member">get_c</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1ae2e4b22e405e0b6159b258cd173a1d29" kindref="member">c</ref>;}</highlight></codeline>
-<codeline lineno="219" refid="class_miyamoto___needle_1a728fabb40a69387606eab765cfb9a935" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a728fabb40a69387606eab765cfb9a935" kindref="member">get_M</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1ae04c1160d954af6133276d8f6b4945a6" kindref="member">M</ref>;}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="221" refid="class_miyamoto___needle_1a747613061935024c95b915945fc2d1db" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a747613061935024c95b915945fc2d1db" kindref="member">density</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="222" refid="class_miyamoto___needle_1a0e6db0cd089ab1ee94b26aab748b99cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_miyamoto___needle_1a0e6db0cd089ab1ee94b26aab748b99cf" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="223" refid="class_miyamoto___needle_1a2b9b6279f2acd079521f0eac0eddf22e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_miyamoto___needle_1a2b9b6279f2acd079521f0eac0eddf22e" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="224"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"></highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227" refid="class_modified___hubble" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_modified___hubble" kindref="compound">Modified_Hubble</ref></highlight></codeline>
-<codeline lineno="228"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="230" refid="class_modified___hubble_1a4e7b0b9bf1ae2f1bbfe61c0ccf8150c4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1a265a9b2cd12a73b6030e48ae830f976b" kindref="member">rs</ref>,<sp/><ref refid="class_modified___hubble_1a88e5ef4cca485b02aa31e88835437e3e" kindref="member">Ms</ref>,<sp/><ref refid="class_modified___hubble_1a4e7b0b9bf1ae2f1bbfe61c0ccf8150c4" kindref="member">Gravity</ref>;</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="232" refid="class_modified___hubble_1a748b086045c63f3f989ea0bab8c46c41" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1a748b086045c63f3f989ea0bab8c46c41" kindref="member">set_Modified_Hubble</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>G)</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_modified___hubble_1a265a9b2cd12a73b6030e48ae830f976b" kindref="member">rs</ref><sp/>=<sp/>r;</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_modified___hubble_1a88e5ef4cca485b02aa31e88835437e3e" kindref="member">Ms</ref><sp/>=<sp/>m;</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_modified___hubble_1a4e7b0b9bf1ae2f1bbfe61c0ccf8150c4" kindref="member">Gravity</ref><sp/>=<sp/>G;</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="239" refid="class_modified___hubble_1ace666b662ff42ece7d32f55a5d838060" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1ace666b662ff42ece7d32f55a5d838060" kindref="member">set_rs</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<ref refid="class_modified___hubble_1a265a9b2cd12a73b6030e48ae830f976b" kindref="member">rs</ref><sp/>=<sp/>r;}</highlight></codeline>
-<codeline lineno="240" refid="class_modified___hubble_1a0d046f7a86499b239ec6cc4718b4b9f0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1a0d046f7a86499b239ec6cc4718b4b9f0" kindref="member">set_Ms</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<ref refid="class_modified___hubble_1a88e5ef4cca485b02aa31e88835437e3e" kindref="member">Ms</ref><sp/>=<sp/>m;}</highlight></codeline>
-<codeline lineno="241" refid="class_modified___hubble_1ac2eaab1466287b451d5b00583814b87f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1ac2eaab1466287b451d5b00583814b87f" kindref="member">set_Gravity</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>g)<sp/><sp/><sp/><sp/>{<ref refid="class_modified___hubble_1a4e7b0b9bf1ae2f1bbfe61c0ccf8150c4" kindref="member">Gravity</ref><sp/>=<sp/>g;}</highlight></codeline>
-<codeline lineno="242" refid="class_modified___hubble_1ab89f4ce4edc1bd0a812479001dcc4e00" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1ab89f4ce4edc1bd0a812479001dcc4e00" kindref="member">get_rs</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1a265a9b2cd12a73b6030e48ae830f976b" kindref="member">rs</ref>;}</highlight></codeline>
-<codeline lineno="243" refid="class_modified___hubble_1acd06e0e80afa505dd6bfb6fc5564ba05" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1acd06e0e80afa505dd6bfb6fc5564ba05" kindref="member">get_Ms</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1a88e5ef4cca485b02aa31e88835437e3e" kindref="member">Ms</ref>;}</highlight></codeline>
-<codeline lineno="244" refid="class_modified___hubble_1a55c15e3f451840c1cc00701b6f494374" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1a55c15e3f451840c1cc00701b6f494374" kindref="member">get_Gravity</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1a4e7b0b9bf1ae2f1bbfe61c0ccf8150c4" kindref="member">Gravity</ref>;}</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="246" refid="class_modified___hubble_1ab650a35cae6f74eea6ec337664af031c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_modified___hubble_1ab650a35cae6f74eea6ec337664af031c" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="247" refid="class_modified___hubble_1a03ab19e33504eaa6403ceafbffb5da4e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_modified___hubble_1a03ab19e33504eaa6403ceafbffb5da4e" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="248"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"></highlight></codeline>
-<codeline lineno="250"><highlight class="normal"></highlight></codeline>
-<codeline lineno="251"><highlight class="normal"></highlight></codeline>
-<codeline lineno="252"><highlight class="normal"></highlight></codeline>
-<codeline lineno="253"><highlight class="normal"></highlight></codeline>
-<codeline lineno="254" refid="class_quadrupole___bar" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_quadrupole___bar" kindref="compound">Quadrupole_Bar</ref></highlight></codeline>
-<codeline lineno="255"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="257" refid="class_quadrupole___bar_1a961f80cc93358cba6a2034b2a0a1e662" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_quadrupole___bar_1a02182ada8a08b4988e9545213d215222" kindref="member">GQ</ref>,<sp/><ref refid="class_quadrupole___bar_1a961f80cc93358cba6a2034b2a0a1e662" kindref="member">a2</ref>;</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="259" refid="class_quadrupole___bar_1aa4e7a384b67d0010bed1623cecdc3d15" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_quadrupole___bar_1aa4e7a384b67d0010bed1623cecdc3d15" kindref="member">set_Quadrupole_Bar</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>G,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Q,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>length)</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_quadrupole___bar_1a961f80cc93358cba6a2034b2a0a1e662" kindref="member">a2</ref><sp/>=<sp/>length*length;</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_quadrupole___bar_1a02182ada8a08b4988e9545213d215222" kindref="member">GQ</ref><sp/>=<sp/>G*Q;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="265" refid="class_quadrupole___bar_1acca0ab610490f1d12c0767c61ce758df" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_quadrupole___bar_1acca0ab610490f1d12c0767c61ce758df" kindref="member">potential</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="266" refid="class_quadrupole___bar_1a9b8db538046a54d13f8d7856057689ae" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_quadrupole___bar_1a9b8db538046a54d13f8d7856057689ae" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="267"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"></highlight></codeline>
-<codeline lineno="269"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/models.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/namespace_alt_math.xml b/doxyxml/namespace_alt_math.xml
deleted file mode 100644
index 6060054..0000000
--- a/doxyxml/namespace_alt_math.xml
+++ /dev/null
@@ -1,127 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="namespace_alt_math" kind="namespace" language="C++">
-    <compoundname>AltMath</compoundname>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="namespace_alt_math_1a4351f4a311e7737d65583bab04db5ed7" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double AltMath::assoc_laguerre</definition>
-        <argsstring>(unsigned l, unsigned n, double x)</argsstring>
-        <name>assoc_laguerre</name>
-        <qualifiedname>AltMath::assoc_laguerre</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>l</declname>
-        </param>
-        <param>
-          <type>unsigned</type>
-          <declname>n</declname>
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-        <param>
-          <type>double</type>
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-        <inbodydescription>
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-        <location file="/home/weinberg/Projects/EXP/include/EXPmath.H" line="17" column="10" declfile="/home/weinberg/Projects/EXP/include/EXPmath.H" declline="17" declcolumn="10"/>
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-      <memberdef kind="function" id="namespace_alt_math_1ac42ad664c538dbbdded58b375019a34e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double AltMath::cyl_bessel_i</definition>
-        <argsstring>(double nu, double x)</argsstring>
-        <name>cyl_bessel_i</name>
-        <qualifiedname>AltMath::cyl_bessel_i</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>nu</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPmath.H" line="13" column="10" declfile="/home/weinberg/Projects/EXP/include/EXPmath.H" declline="13" declcolumn="10"/>
-      </memberdef>
-      <memberdef kind="function" id="namespace_alt_math_1aaa2e959ee26a82a285ec0809aebf0d3a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double AltMath::cyl_bessel_j</definition>
-        <argsstring>(double nu, double x)</argsstring>
-        <name>cyl_bessel_j</name>
-        <qualifiedname>AltMath::cyl_bessel_j</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>nu</declname>
-        </param>
-        <param>
-          <type>double</type>
-          <declname>x</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/EXPmath.H" line="14" column="10" declfile="/home/weinberg/Projects/EXP/include/EXPmath.H" declline="14" declcolumn="10"/>
-      </memberdef>
-      <memberdef kind="function" id="namespace_alt_math_1a29ac5a4960bc49847b8955bd2f449d3c" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double AltMath::cyl_bessel_k</definition>
-        <argsstring>(double nu, double x)</argsstring>
-        <name>cyl_bessel_k</name>
-        <qualifiedname>AltMath::cyl_bessel_k</qualifiedname>
-        <param>
-          <type>double</type>
-          <declname>nu</declname>
-        </param>
-        <param>
-          <type>double</type>
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-        </param>
-        <briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/include/EXPmath.H" line="15" column="10" declfile="/home/weinberg/Projects/EXP/include/EXPmath.H" declline="15" declcolumn="10"/>
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-      <memberdef kind="function" id="namespace_alt_math_1ab1f245db359cef31db6898333186bb97" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double AltMath::sph_bessel</definition>
-        <argsstring>(unsigned n, double x)</argsstring>
-        <name>sph_bessel</name>
-        <qualifiedname>AltMath::sph_bessel</qualifiedname>
-        <param>
-          <type>unsigned</type>
-          <declname>n</declname>
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-        <param>
-          <type>double</type>
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-        <location file="/home/weinberg/Projects/EXP/include/EXPmath.H" line="16" column="10" declfile="/home/weinberg/Projects/EXP/include/EXPmath.H" declline="16" declcolumn="10"/>
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-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/EXPmath.H" line="11" column="1"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/namespace_eigen.xml b/doxyxml/namespace_eigen.xml
deleted file mode 100644
index 8bc4a95..0000000
--- a/doxyxml/namespace_eigen.xml
+++ /dev/null
@@ -1,11 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="namespace_eigen" kind="namespace" language="C++">
-    <compoundname>Eigen</compoundname>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="[generated]" line="1" column="1"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/namespace_k_dtree.xml b/doxyxml/namespace_k_dtree.xml
deleted file mode 100644
index 49d10e2..0000000
--- a/doxyxml/namespace_k_dtree.xml
+++ /dev/null
@@ -1,50 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="namespace_k_dtree" kind="namespace" language="C++">
-    <compoundname>KDtree</compoundname>
-    <innerclass refid="class_k_dtree_1_1_cache" prot="public">KDtree::Cache</innerclass>
-    <innerclass refid="class_k_dtree_1_1kdtree" prot="public">KDtree::kdtree</innerclass>
-    <innerclass refid="class_k_dtree_1_1point" prot="public">KDtree::point</innerclass>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="namespace_k_dtree_1ae65ddc968742c1a90478e83ca9cd52b5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <templateparamlist>
-          <param>
-            <type>typename coordinate_type</type>
-          </param>
-          <param>
-            <type>size_t</type>
-            <declname>dimensions</declname>
-            <defname>dimensions</defname>
-          </param>
-        </templateparamlist>
-        <type>std::ostream &amp;</type>
-        <definition>std::ostream &amp; KDtree::operator&lt;&lt;</definition>
-        <argsstring>(std::ostream &amp;out, const point&lt; coordinate_type, dimensions &gt; &amp;pt)</argsstring>
-        <name>operator&lt;&lt;</name>
-        <qualifiedname>KDtree::operator&lt;&lt;</qualifiedname>
-        <param>
-          <type>std::ostream &amp;</type>
-          <declname>out</declname>
-        </param>
-        <param>
-          <type>const <ref refid="class_k_dtree_1_1point" kindref="compound">point</ref>&lt; coordinate_type, dimensions &gt; &amp;</type>
-          <declname>pt</declname>
-        </param>
-        <briefdescription>
-<para>For iostream printing of points. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="151" column="3" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="151" bodyend="161"/>
-        <references refid="class_k_dtree_1_1point_1a693012127d3ee164726ed99f67d7ddac" compoundref="_k_dtree_8_h" startline="86" endline="89">KDtree::point&lt; coordinate_type, dimensions &gt;::get</references>
-      </memberdef>
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-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="9" column="1"/>
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diff --git a/doxyxml/namespace_o_d_e.xml b/doxyxml/namespace_o_d_e.xml
deleted file mode 100644
index ca0ce84..0000000
--- a/doxyxml/namespace_o_d_e.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="namespace_o_d_e" kind="namespace" language="C++">
-    <compoundname>ODE</compoundname>
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diff --git a/doxyxml/namespace_p_r.xml b/doxyxml/namespace_p_r.xml
deleted file mode 100644
index 97c2153..0000000
--- a/doxyxml/namespace_p_r.xml
+++ /dev/null
@@ -1,36 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
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-    <innerclass refid="class_p_r_1_1_gadget_native" prot="public">PR::GadgetNative</innerclass>
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-    <innerclass refid="class_p_r_1_1_tipsy" prot="public">PR::Tipsy</innerclass>
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-        <name>PRptr</name>
-        <qualifiedname>PR::PRptr</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="558" column="27" bodyfile="/home/weinberg/Projects/EXP/include/ParticleReader.H" bodystart="558" bodyend="-1"/>
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-    <location file="/home/weinberg/Projects/EXP/include/ParticleReader.H" line="27" column="1"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/namespace_tipsy_reader.xml b/doxyxml/namespace_tipsy_reader.xml
deleted file mode 100644
index a3fb611..0000000
--- a/doxyxml/namespace_tipsy_reader.xml
+++ /dev/null
@@ -1,50 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="namespace_tipsy_reader" kind="namespace" language="C++">
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-    <innerclass refid="struct_tipsy_reader_1_1dark__particle" prot="public">TipsyReader::dark_particle</innerclass>
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-    <innerclass refid="class_tipsy_reader_1_1_tipsy_file" prot="public">TipsyReader::TipsyFile</innerclass>
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-        <type>float</type>
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-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="21" column="3" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="21" bodyend="-1"/>
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-        <argsstring></argsstring>
-        <name>MAXDIM</name>
-        <qualifiedname>TipsyReader::MAXDIM</qualifiedname>
-        <initializer>= 3</initializer>
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-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="19" column="13" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="19" bodyend="-1"/>
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-    <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="16" column="1"/>
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diff --git a/doxyxml/namespacecxxopts.xml b/doxyxml/namespacecxxopts.xml
deleted file mode 100644
index 8a40dc6..0000000
--- a/doxyxml/namespacecxxopts.xml
+++ /dev/null
@@ -1,435 +0,0 @@
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-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="namespacecxxopts" kind="namespace" language="C++">
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-    <innerclass refid="classcxxopts_1_1argument__incorrect__type" prot="public">cxxopts::argument_incorrect_type</innerclass>
-    <innerclass refid="structcxxopts_1_1_help_group_details" prot="public">cxxopts::HelpGroupDetails</innerclass>
-    <innerclass refid="structcxxopts_1_1_help_option_details" prot="public">cxxopts::HelpOptionDetails</innerclass>
-    <innerclass refid="classcxxopts_1_1invalid__option__format__error" prot="public">cxxopts::invalid_option_format_error</innerclass>
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-    <innerclass refid="classcxxopts_1_1_option_parser" prot="public">cxxopts::OptionParser</innerclass>
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-        <argsstring></argsstring>
-        <name>NameHashMap</name>
-        <qualifiedname>cxxopts::NameHashMap</qualifiedname>
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deleted file mode 100644
index d3914ce..0000000
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deleted file mode 100644
index e3d2358..0000000
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deleted file mode 100644
index f557852..0000000
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deleted file mode 100644
index ff579aa..0000000
--- a/doxyxml/namespacecxxopts_1_1values_1_1parser__tool_1_1_0d19.xml
+++ /dev/null
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deleted file mode 100644
index f7bf13f..0000000
--- a/doxyxml/namespaceprogress.xml
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deleted file mode 100644
index d64f95c..0000000
--- a/doxyxml/namespacepsp__io.xml
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-
-MSP 25 Oct 2021 Overhauled version
-
-
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deleted file mode 100644
index 30168f0..0000000
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deleted file mode 100644
index 721d50b..0000000
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deleted file mode 100644
index 70ba92d..0000000
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-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
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-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="comment">/*<sp/>P_high<sp/>=<sp/>1<sp/>-<sp/>p_low*/</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="34"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x=0.0;</highlight></codeline>
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-<codeline lineno="36"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>((0<sp/>&lt;<sp/>p<sp/>)<sp/><sp/>&amp;&amp;<sp/>(p<sp/>&lt;<sp/><ref refid="norminv_8_h_1a6e629cdeeadd926c593ea9bdde376cf4" kindref="member">P_LOW</ref>)){</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/>q<sp/>=<sp/>sqrt(-2*log(p));</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/>x<sp/>=<sp/>(((((<ref refid="norminv_8_h_1a44779f18d87e71c78fc9fbf9dc88537d" kindref="member">C1</ref>*q+<ref refid="norminv_8_h_1ad6fc13322a4f1c314332ff34aa8b3fa0" kindref="member">C2</ref>)*q+<ref refid="norminv_8_h_1a58aba30d6a33889c81827a54620dd5d9" kindref="member">C3</ref>)*q+<ref refid="norminv_8_h_1acc39015f57b2efb8810b603f188bdf15" kindref="member">C4</ref>)*q+<ref refid="norminv_8_h_1a3b69b61d9deb37b13911faf2cf5cf1d5" kindref="member">C5</ref>)*q+<ref refid="norminv_8_h_1a3cc680a71aa57979316e647352cb4e35" kindref="member">C6</ref>)<sp/>/<sp/>((((<ref refid="norminv_8_h_1a52deba56234661c77d4b9573d5175ae2" kindref="member">D1</ref>*q+<ref refid="norminv_8_h_1a7537ecd0f0af6ccc5b85d5df80f4aee7" kindref="member">D2</ref>)*q+<ref refid="norminv_8_h_1afea037e4c6e9187610b538bd6a34b8ff" kindref="member">D3</ref>)*q+<ref refid="norminv_8_h_1a3d9bb178282c3cb69740c94ba1e48fed" kindref="member">D4</ref>)*q+1);</highlight></codeline>
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-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>((<ref refid="norminv_8_h_1a6e629cdeeadd926c593ea9bdde376cf4" kindref="member">P_LOW</ref><sp/>&lt;=<sp/>p)<sp/>&amp;&amp;<sp/>(p<sp/>&lt;=<sp/><ref refid="norminv_8_h_1ace3512e685f1c61843669c18d2382d9d" kindref="member">P_HIGH</ref>)){</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>q<sp/>=<sp/>p<sp/>-<sp/>0.5;</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>r<sp/>=<sp/>q*q;</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>x<sp/>=<sp/>(((((<ref refid="norminv_8_h_1acd92b430059d886880c53f13ae038e3f" kindref="member">A1</ref>*r+<ref refid="norminv_8_h_1a2946bc30423c2a996eeafa49e995c30e" kindref="member">A2</ref>)*r+<ref refid="norminv_8_h_1a48cdc6c9a75eb611d0a703c94bdac6b8" kindref="member">A3</ref>)*r+<ref refid="norminv_8_h_1aa0a03ad95ca0cb887a11e321fa1c9519" kindref="member">A4</ref>)*r+<ref refid="norminv_8_h_1a635a5115ac94c220c2de74fa24fd05b6" kindref="member">A5</ref>)*r+<ref refid="norminv_8_h_1a98b118c8a6727dbb618e0b262d24c939" kindref="member">A6</ref>)*q<sp/>/(((((<ref refid="norminv_8_h_1a7b21d6a6a4573b4997b1f04b01cd4efb" kindref="member">B1</ref>*r+<ref refid="norminv_8_h_1a6945d50f798e1fde624d70c74457090e" kindref="member">B2</ref>)*r+<ref refid="norminv_8_h_1ae6ac0edb1e2c9c7672ab9488d8b65be9" kindref="member">B3</ref>)*r+<ref refid="norminv_8_h_1a0bf59f84e29fb57d27314583365a88d6" kindref="member">B4</ref>)*r+<ref refid="norminv_8_h_1abaa73bfe02579d51cebce4434d15c5e1" kindref="member">B5</ref>)*r+1);</highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>((<ref refid="norminv_8_h_1ace3512e685f1c61843669c18d2382d9d" kindref="member">P_HIGH</ref><sp/>&lt;<sp/>p)&amp;&amp;(p<sp/>&lt;<sp/>1)){</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>q<sp/>=<sp/>sqrt(-2*log(1-p));</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>x<sp/>=<sp/>-(((((<ref refid="norminv_8_h_1a44779f18d87e71c78fc9fbf9dc88537d" kindref="member">C1</ref>*q+<ref refid="norminv_8_h_1ad6fc13322a4f1c314332ff34aa8b3fa0" kindref="member">C2</ref>)*q+<ref refid="norminv_8_h_1a58aba30d6a33889c81827a54620dd5d9" kindref="member">C3</ref>)*q+<ref refid="norminv_8_h_1acc39015f57b2efb8810b603f188bdf15" kindref="member">C4</ref>)*q+<ref refid="norminv_8_h_1a3b69b61d9deb37b13911faf2cf5cf1d5" kindref="member">C5</ref>)*q+<ref refid="norminv_8_h_1a3cc680a71aa57979316e647352cb4e35" kindref="member">C6</ref>)<sp/>/<sp/>((((<ref refid="norminv_8_h_1a52deba56234661c77d4b9573d5175ae2" kindref="member">D1</ref>*q+<ref refid="norminv_8_h_1a7537ecd0f0af6ccc5b85d5df80f4aee7" kindref="member">D2</ref>)*q+<ref refid="norminv_8_h_1afea037e4c6e9187610b538bd6a34b8ff" kindref="member">D3</ref>)*q+<ref refid="norminv_8_h_1a3d9bb178282c3cb69740c94ba1e48fed" kindref="member">D4</ref>)*q+1);</highlight></codeline>
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-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
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-<codeline lineno="54"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal">((<sp/>0<sp/>&lt;<sp/>p)&amp;&amp;(p<sp/>&lt;<sp/>1)){</highlight></codeline>
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-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/>u<sp/>=<sp/>e<sp/>*<sp/>sqrt(2*M_PI)<sp/>*<sp/>exp(x*x/2);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/>x<sp/>=<sp/>x<sp/>-<sp/>u/(1<sp/>+<sp/>x*u/2);</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
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diff --git a/doxyxml/numerical_8_h.xml b/doxyxml/numerical_8_h.xml
deleted file mode 100644
index d244104..0000000
--- a/doxyxml/numerical_8_h.xml
+++ /dev/null
@@ -1,950 +0,0 @@
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-        <param><defname>X</defname></param>
-        <param><defname>Y</defname></param>
-        <initializer>(((X) &gt; (Y)) ? (X) : (Y))</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="10" column="9" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="10" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="define" id="numerical_8_h_1ad2f3678bf5eae3684fc497130b946eae" prot="public" static="no">
-        <name>MIN</name>
-        <param><defname>X</defname></param>
-        <param><defname>Y</defname></param>
-        <initializer>(((X) &lt; (Y)) ? (X) : (Y))</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="13" column="9" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="13" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="define" id="numerical_8_h_1a90bdd4bad125296a08c222d412674ed3" prot="public" static="no">
-        <name>Sign</name>
-        <param><defname>X</defname></param>
-        <initializer>(((X)&gt;0) ? (1.0) : (-1.0))</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="22" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="define" id="numerical_8_h_1a2eb03319e5ccdc1a14b73a7d8b1724de" prot="public" static="no">
-        <name>SQR</name>
-        <param><defname>X</defname></param>
-        <initializer>((X)*(X))</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="18" column="9" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="define" id="numerical_8_h_1acf1c38f71f39386356edb151a131ad11" prot="public" static="no">
-        <name>TINY</name>
-        <initializer>1.e-10</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="20" column="9" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="20" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" prot="public" static="no">
-        <type>std::function&lt; void(double, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;)&gt;</type>
-        <definition>using ode_derivs =  std::function&lt;void(double, Eigen::VectorXd&amp;, Eigen::VectorXd&amp;)&gt;</definition>
-        <argsstring></argsstring>
-        <name>ode_derivs</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="73" column="1" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="74" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="numerical_8_h_1a0aefe47f5a0d9a3f079c32493f0f7c78" prot="public" static="no">
-        <type>std::function&lt; void(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, int, double &amp;, double, double, Eigen::VectorXd &amp;, double &amp;, double &amp;, <ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>)&gt;</type>
-        <definition>using ode_integrator =  std::function&lt;void(Eigen::VectorXd&amp;, Eigen::VectorXd&amp;, int, double&amp;, double, double, Eigen::VectorXd&amp;, double&amp;, double&amp;, ode_derivs)&gt;</definition>
-        <argsstring></argsstring>
-        <name>ode_integrator</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="76" column="1" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="79" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="numerical_8_h_1a0774b45de49a0704d980661d93332d34" prot="public" static="no">
-        <type>std::function&lt; void(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, int, double, double, Eigen::VectorXd &amp;, <ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>)&gt;</type>
-        <definition>using ode_rk =  std::function&lt;void(Eigen::VectorXd&amp;, Eigen::VectorXd&amp;, int, double, double, Eigen::VectorXd&amp;, ode_derivs)&gt;</definition>
-        <argsstring></argsstring>
-        <name>ode_rk</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="81" column="1" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="83" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="numerical_8_h_1a1bd598a94747cd8305e2785b2c056353" prot="public" static="no">
-        <type>std::function&lt; void(double, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;)&gt;</type>
-        <definition>using symp_derivs =  std::function&lt;void(double, Eigen::VectorXd&amp;, Eigen::VectorXd&amp;, Eigen::VectorXd&amp;)&gt;</definition>
-        <argsstring></argsstring>
-        <name>symp_derivs</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="86" column="1" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="88" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="numerical_8_h_1aad116aeeb2c95bb00b91cb98b31b4d33" prot="public" static="no">
-        <type>std::function&lt; void(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, double, double, <ref refid="numerical_8_h_1a1bd598a94747cd8305e2785b2c056353" kindref="member">symp_derivs</ref>)&gt;</type>
-        <definition>using symp_integrator =  std::function&lt;void(Eigen::VectorXd&amp;, Eigen::VectorXd&amp;, Eigen::VectorXd&amp;, Eigen::VectorXd&amp;, double, double, symp_derivs)&gt;</definition>
-        <argsstring></argsstring>
-        <name>symp_integrator</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="90" column="1" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="93" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="var">
-      <memberdef kind="variable" id="numerical_8_h_1ad37e1b7740e725cb44517fce48e5e3ab" prot="public" static="no" mutable="no">
-        <type>const double</type>
-        <definition>const double Pi</definition>
-        <argsstring></argsstring>
-        <name>Pi</name>
-        <initializer>= 3.141592653589793</initializer>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="32" column="14" bodyfile="/home/weinberg/Projects/EXP/include/numerical.H" bodystart="32" bodyend="-1"/>
-        <referencedby refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" compoundref="staeckel_8_h" startline="14" endline="23">Perfect::set_Perfect</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="numerical_8_h_1a8e2625945f299221024f9f2d4f906fea" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double brent</definition>
-        <argsstring>(double, double, double, std::function&lt; double(double)&gt;, double, double &amp;)</argsstring>
-        <name>brent</name>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="61" column="8" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="61" declcolumn="8"/>
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-      <memberdef kind="function" id="numerical_8_h_1abe6a24f97dc6cdcdc907146ac206543e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void bsstep</definition>
-        <argsstring>(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, int, double &amp;, double, double, Eigen::VectorXd &amp;, double &amp;, double &amp;, ode_derivs)</argsstring>
-        <name>bsstep</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="110" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="110" declcolumn="6"/>
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-      <memberdef kind="function" id="numerical_8_h_1a8072d87f9b56c82ec2b065635277f371" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void constant_step</definition>
-        <argsstring>(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, int, double, ode_derivs, ode_rk)</argsstring>
-        <name>constant_step</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref></type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a0774b45de49a0704d980661d93332d34" kindref="member">ode_rk</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="113" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="113" declcolumn="6"/>
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-      <memberdef kind="function" id="numerical_8_h_1acd8d998ac4ff0c240aae86930af15b3d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void gauleg</definition>
-        <argsstring>(double, double, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, int)</argsstring>
-        <name>gauleg</name>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="39" column="8" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="39" declcolumn="8"/>
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-      <memberdef kind="function" id="numerical_8_h_1a2af23097fe09b9394dd402aa995fa713" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void integrate_ode</definition>
-        <argsstring>(Eigen::VectorXd &amp;, double, double, double &amp;, double, int, ode_derivs, ode_integrator)</argsstring>
-        <name>integrate_ode</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref></type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a0aefe47f5a0d9a3f079c32493f0f7c78" kindref="member">ode_integrator</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="97" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="97" declcolumn="6"/>
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-      <memberdef kind="function" id="numerical_8_h_1abe0aaee06ed9541528c0a5a31ae3609b" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void locate</definition>
-        <argsstring>(Eigen::VectorXd &amp;, int, double, int *)</argsstring>
-        <name>locate</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>int *</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="125" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="125" declcolumn="6"/>
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-      <memberdef kind="function" id="numerical_8_h_1a2ab3fa38c1aa72dada27c5f2b33bbc52" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void mnbrak</definition>
-        <argsstring>(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, std::function&lt; double(double)&gt;)</argsstring>
-        <name>mnbrak</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="63" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="63" declcolumn="6"/>
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-        <type>void</type>
-        <definition>void onestep</definition>
-        <argsstring>(Eigen::VectorXd &amp;, double &amp;, int, double &amp;, double, ode_derivs, ode_integrator)</argsstring>
-        <name>onestep</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref></type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a0aefe47f5a0d9a3f079c32493f0f7c78" kindref="member">ode_integrator</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="101" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="101" declcolumn="6"/>
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-        <type>double</type>
-        <definition>double poly</definition>
-        <argsstring>(double, int, double *)</argsstring>
-        <name>poly</name>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>double *</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="35" column="8" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="35" declcolumn="8"/>
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-      <memberdef kind="function" id="numerical_8_h_1a554a309b7cf0bd70273972eca533789a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double qadapt</definition>
-        <argsstring>(double, double, std::function&lt; double(double)&gt;, double)</argsstring>
-        <name>qadapt</name>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="40" column="8" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="40" declcolumn="8"/>
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-      <memberdef kind="function" id="numerical_8_h_1a1bbf6ae4c3039dbe9885e6462d413887" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double qadapt2d</definition>
-        <argsstring>(double, double, double, double, std::function&lt; double(double, double)&gt;, double)</argsstring>
-        <name>qadapt2d</name>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>std::function&lt; double(double, double)&gt;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="41" column="8" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="41" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="numerical_8_h_1a1f7d825209d0f55b93b1faddd06142ce" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void rk2qc</definition>
-        <argsstring>(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, int, double &amp;, double, double, Eigen::VectorXd &amp;, double &amp;, double &amp;, ode_derivs)</argsstring>
-        <name>rk2qc</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="107" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="107" declcolumn="6"/>
-      </memberdef>
-      <memberdef kind="function" id="numerical_8_h_1aa98b424f7b9cddea4e722ed7392a7979" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void rk4</definition>
-        <argsstring>(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, int, double, double, Eigen::VectorXd &amp;, ode_derivs)</argsstring>
-        <name>rk4</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="116" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="116" declcolumn="6"/>
-      </memberdef>
-      <memberdef kind="function" id="numerical_8_h_1a7332266cbf785af27b007eb44638c34d" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void rkqc</definition>
-        <argsstring>(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, int, double &amp;, double, double, Eigen::VectorXd &amp;, double &amp;, double &amp;, ode_derivs)</argsstring>
-        <name>rkqc</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>int</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="104" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="104" declcolumn="6"/>
-      </memberdef>
-      <memberdef kind="function" id="numerical_8_h_1a19092d3aba79e258689bf6a710346a12" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double rtbis</definition>
-        <argsstring>(std::function&lt; double(double)&gt;, double, double, double)</argsstring>
-        <name>rtbis</name>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="50" column="8" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="50" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="numerical_8_h_1a1b77cef08af5791845bf6ef2a2149cb6" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double rtsafe</definition>
-        <argsstring>(std::function&lt; void(double, double &amp;, double &amp;)&gt;, double, double, double)</argsstring>
-        <name>rtsafe</name>
-        <param>
-          <type>std::function&lt; void(double, double &amp;, double &amp;)&gt;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="52" column="8" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="52" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="numerical_8_h_1a5dccc4cf3d8d1ea1051c0b6d6ab5737e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void sia4</definition>
-        <argsstring>(Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;, double, double, symp_derivs)</argsstring>
-        <name>sia4</name>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type><ref refid="numerical_8_h_1a1bd598a94747cd8305e2785b2c056353" kindref="member">symp_derivs</ref></type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="119" column="6" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="119" declcolumn="6"/>
-      </memberdef>
-      <memberdef kind="function" id="numerical_8_h_1abcb9dca4b635c697549f0e862d3b264e" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>int</type>
-        <definition>int zbrac</definition>
-        <argsstring>(std::function&lt; double(double)&gt;, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;)</argsstring>
-        <name>zbrac</name>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="54" column="5" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="54" declcolumn="5"/>
-      </memberdef>
-      <memberdef kind="function" id="numerical_8_h_1a52b35977d5a80f67663a86d89f38d769" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double zbrent</definition>
-        <argsstring>(std::function&lt; double(double)&gt;, double, double, double)</argsstring>
-        <name>zbrent</name>
-        <param>
-          <type>std::function&lt; double(double)&gt;</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/numerical.H" line="48" column="8" declfile="/home/weinberg/Projects/EXP/include/numerical.H" declline="48" declcolumn="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_numerical_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_numerical_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;functional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="comment">//<sp/>some<sp/>simple<sp/>macros<sp/>(some<sp/>very<sp/>old<sp/>stuff,<sp/>not<sp/>yet<sp/>replaced)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>MAX</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="numerical_8_h_1aff9931d7524c88e07743af6535b20761" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>MAX(X,<sp/>Y)<sp/>(((X)<sp/>&gt;<sp/>(Y))<sp/>?<sp/>(X)<sp/>:<sp/>(Y))</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>MIN</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13" refid="numerical_8_h_1ad2f3678bf5eae3684fc497130b946eae" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>MIN(X,<sp/>Y)<sp/>(((X)<sp/>&lt;<sp/>(Y))<sp/>?<sp/>(X)<sp/>:<sp/>(Y))</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="numerical_8_h_1a97aa4af1a3e9105a48c9fe831b37d9ec" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>FLOAT(X)<sp/><sp/>((float)<sp/>(X))</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="numerical_8_h_1a39488788cf0a27cf6e39f97a05383073" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>DOUBLE(X)<sp/>((double)<sp/>(X))</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="numerical_8_h_1a2eb03319e5ccdc1a14b73a7d8b1724de" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>SQR(X)<sp/>((X)*(X))</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>TINY</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="numerical_8_h_1acf1c38f71f39386356edb151a131ad11" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>TINY<sp/>1.e-10</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="numerical_8_h_1a90bdd4bad125296a08c222d412674ed3" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>Sign(X)<sp/>(((X)&gt;0)<sp/>?<sp/>(1.0)<sp/>:<sp/>(-1.0))</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight><highlight class="comment">//<sp/>special<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="comment">//<sp/>double<sp/>BesselJ(int,<sp/>double);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight><highlight class="comment">//<sp/>double<sp/>BesselI(int,<sp/>double);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight><highlight class="comment">//<sp/>double<sp/>BesselK(int,<sp/>double);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="comment">//<sp/>double<sp/>gammln(double);</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="numerical_8_h_1ad37e1b7740e725cb44517fce48e5e3ab" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1ad37e1b7740e725cb44517fce48e5e3ab" kindref="member">Pi</ref><sp/>=<sp/>3.141592653589793;</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="numerical_8_h_1a36a84e080649693f10597c8e7246dde8" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a36a84e080649693f10597c8e7246dde8" kindref="member">poly</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight><highlight class="comment">//<sp/>numerical<sp/>quadrature</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39" refid="numerical_8_h_1acd8d998ac4ff0c240aae86930af15b3d" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="numerical_8_h_1acd8d998ac4ff0c240aae86930af15b3d" kindref="member">gauleg</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="40" refid="numerical_8_h_1a554a309b7cf0bd70273972eca533789a" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a554a309b7cf0bd70273972eca533789a" kindref="member">qadapt</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="41" refid="numerical_8_h_1a1bbf6ae4c3039dbe9885e6462d413887" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a1bbf6ae4c3039dbe9885e6462d413887" kindref="member">qadapt2d</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight><highlight class="comment">//<sp/>root<sp/>finding</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="numerical_8_h_1a52b35977d5a80f67663a86d89f38d769" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1a6e0f498dcf0bee81ec1da49b80fcd0ed" kindref="member">zbrent</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50" refid="numerical_8_h_1a19092d3aba79e258689bf6a710346a12" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a19092d3aba79e258689bf6a710346a12" kindref="member">rtbis</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="numerical_8_h_1a1b77cef08af5791845bf6ef2a2149cb6" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a1b77cef08af5791845bf6ef2a2149cb6" kindref="member">rtsafe</ref>(std::function&lt;</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;)&gt;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="numerical_8_h_1abcb9dca4b635c697549f0e862d3b264e" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1abcb9dca4b635c697549f0e862d3b264e" kindref="member">zbrac</ref>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;,<sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight><highlight class="comment">//<sp/>1D<sp/>minimization</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="61" refid="numerical_8_h_1a8e2625945f299221024f9f2d4f906fea" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a8e2625945f299221024f9f2d4f906fea" kindref="member">brent</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;,</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;);</highlight></codeline>
-<codeline lineno="63" refid="numerical_8_h_1a2ab3fa38c1aa72dada27c5f2b33bbc52" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a2ab3fa38c1aa72dada27c5f2b33bbc52" kindref="member">mnbrak</ref>(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight></codeline>
-<codeline lineno="65"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;,<sp/>std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight><highlight class="comment">//<sp/>ODE<sp/>solvers</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight><highlight class="comment">//<sp/>first,<sp/>some<sp/>function<sp/>wrapper<sp/>typedefs</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="73" refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref><sp/>=</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/>std::function&lt;void(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;)&gt;;</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-<codeline lineno="76" refid="numerical_8_h_1a0aefe47f5a0d9a3f079c32493f0f7c78" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="numerical_8_h_1a0aefe47f5a0d9a3f079c32493f0f7c78" kindref="member">ode_integrator</ref><sp/>=</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/>std::function&lt;void(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;,</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>)&gt;;</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"></highlight></codeline>
-<codeline lineno="81" refid="numerical_8_h_1a0774b45de49a0704d980661d93332d34" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="numerical_8_h_1a0774b45de49a0704d980661d93332d34" kindref="member">ode_rk</ref><sp/>=</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/>std::function&lt;void(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;,<sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>)&gt;;</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="numerical_8_h_1a1bd598a94747cd8305e2785b2c056353" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="numerical_8_h_1a1bd598a94747cd8305e2785b2c056353" kindref="member">symp_derivs</ref><sp/>=</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/>std::function&lt;void(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;)&gt;;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"></highlight></codeline>
-<codeline lineno="90" refid="numerical_8_h_1aad116aeeb2c95bb00b91cb98b31b4d33" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="numerical_8_h_1aad116aeeb2c95bb00b91cb98b31b4d33" kindref="member">symp_integrator</ref><sp/>=</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/>std::function&lt;void(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/><ref refid="numerical_8_h_1a1bd598a94747cd8305e2785b2c056353" kindref="member">symp_derivs</ref>)&gt;;</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal"></highlight><highlight class="comment">//<sp/>prototypes<sp/>for<sp/>ODE<sp/>solvers</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="97" refid="numerical_8_h_1a2af23097fe09b9394dd402aa995fa713" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a2af23097fe09b9394dd402aa995fa713" kindref="member">integrate_ode</ref>(Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>,<sp/><ref refid="numerical_8_h_1a0aefe47f5a0d9a3f079c32493f0f7c78" kindref="member">ode_integrator</ref>);</highlight></codeline>
-<codeline lineno="100"><highlight class="normal"></highlight></codeline>
-<codeline lineno="101" refid="numerical_8_h_1a27cd6979e73628e5e93356a381ad0cf8" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a27cd6979e73628e5e93356a381ad0cf8" kindref="member">onestep</ref>(Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>,<sp/><ref refid="numerical_8_h_1a0aefe47f5a0d9a3f079c32493f0f7c78" kindref="member">ode_integrator</ref>);</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="104" refid="numerical_8_h_1a7332266cbf785af27b007eb44638c34d" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a7332266cbf785af27b007eb44638c34d" kindref="member">rkqc</ref>(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>);</highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="107" refid="numerical_8_h_1a1f7d825209d0f55b93b1faddd06142ce" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a1f7d825209d0f55b93b1faddd06142ce" kindref="member">rk2qc</ref><sp/>(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>);</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110" refid="numerical_8_h_1abe6a24f97dc6cdcdc907146ac206543e" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1abe6a24f97dc6cdcdc907146ac206543e" kindref="member">bsstep</ref><sp/>(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>);</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113" refid="numerical_8_h_1a8072d87f9b56c82ec2b065635277f371" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a8072d87f9b56c82ec2b065635277f371" kindref="member">constant_step</ref><sp/>(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>,<sp/><ref refid="numerical_8_h_1a0774b45de49a0704d980661d93332d34" kindref="member">ode_rk</ref>);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116" refid="numerical_8_h_1aa98b424f7b9cddea4e722ed7392a7979" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1aa98b424f7b9cddea4e722ed7392a7979" kindref="member">rk4</ref>(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;,<sp/><ref refid="numerical_8_h_1a656074dfe6eff519a38be1c6965428ce" kindref="member">ode_derivs</ref>);</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119" refid="numerical_8_h_1a5dccc4cf3d8d1ea1051c0b6d6ab5737e" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a5dccc4cf3d8d1ea1051c0b6d6ab5737e" kindref="member">sia4</ref>(Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;,</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/><ref refid="numerical_8_h_1a1bd598a94747cd8305e2785b2c056353" kindref="member">symp_derivs</ref>);</highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123"><highlight class="normal"></highlight><highlight class="comment">//<sp/>interpolation<sp/>stuff</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="125" refid="numerical_8_h_1abe0aaee06ed9541528c0a5a31ae3609b" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="expand_8_h_1af2f4ae87f03750cb9cca117d0cfcf2fb" kindref="member">locate</ref><sp/>(Eigen::VectorXd&amp;,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"></highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/numerical.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/orbit_8_h.xml b/doxyxml/orbit_8_h.xml
deleted file mode 100644
index 7f8cb01..0000000
--- a/doxyxml/orbit_8_h.xml
+++ /dev/null
@@ -1,599 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="orbit_8_h" kind="file" language="C++">
-    <compoundname>orbit.H</compoundname>
-    <includes local="no">functional</includes>
-    <includes local="no">memory</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includes refid="gauss_q_8_h" local="no">gaussQ.H</includes>
-    <includedby refid="_q_p_dist_f_8_h" local="no">/home/weinberg/Projects/EXP/include/QPDistF.H</includedby>
-    <includedby refid="massmodel_8_h" local="no">/home/weinberg/Projects/EXP/include/massmodel.H</includedby>
-    <includedby refid="external_shock_8_h" local="no">/home/weinberg/Projects/EXP/src/externalShock.H</includedby>
-    <incdepgraph>
-      <node id="5">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="9">
-        <label>cstdlib</label>
-      </node>
-      <node id="2">
-        <label>functional</label>
-      </node>
-      <node id="7">
-        <label>iomanip</label>
-      </node>
-      <node id="6">
-        <label>iostream</label>
-      </node>
-      <node id="3">
-        <label>memory</label>
-      </node>
-      <node id="8">
-        <label>sstream</label>
-      </node>
-      <node id="10">
-        <label>string</label>
-      </node>
-      <node id="11">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/include/BiorthCube.H</label>
-        <link refid="_biorth_cube_8_h"/>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/include/BiorthCyl.H</label>
-        <link refid="_biorth_cyl_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="16">
-        <label>/home/weinberg/Projects/EXP/include/DiskModels.H</label>
-        <link refid="_disk_models_8_h"/>
-        <childnode refid="17" relation="include">
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-        </childnode>
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/AddDisk.H</label>
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-        </childnode>
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-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
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-        <link refid="_disk_halo_8_h"/>
-      </node>
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-        </childnode>
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-        </childnode>
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-        <label>/home/weinberg/Projects/EXP/utils/ICs/massmodel1d.H</label>
-        <link refid="massmodel1d_8_h"/>
-      </node>
-      <node id="45">
-        <label>/home/weinberg/Projects/EXP/utils/PhaseSpace/MakeModel.H</label>
-        <link refid="_make_model_8_h"/>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="struct_a_n_g_l_e___g_r_i_d" prot="public">ANGLE_GRID</innerclass>
-    <innerclass refid="class_regular_orbit" prot="public">RegularOrbit</innerclass>
-    <innerclass refid="class_spherical_orbit" prot="public">SphericalOrbit</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_orbit_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_orbit_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;functional&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;memory&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="gauss_q_8_h" kindref="compound">gaussQ.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref>;</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_axi_sym_biorth" kindref="compound">AxiSymBiorth</ref>;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12" refid="class_regular_orbit" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_regular_orbit" kindref="compound">RegularOrbit</ref></highlight></codeline>
-<codeline lineno="13"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_regular_orbit_1a6d582e67d7baeece1ffc2e75a8ccaaf3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a6d582e67d7baeece1ffc2e75a8ccaaf3" kindref="member">dof</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_regular_orbit_1a760c90fee34d09e367986807378ada81" refkind="member"><highlight class="normal"><sp/><sp/>std::string<sp/><ref refid="class_regular_orbit_1a760c90fee34d09e367986807378ada81" kindref="member">OrbitID</ref>;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="class_regular_orbit_1ad09e56aa5ed439ccffd9aeb6e47ab658" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1ad09e56aa5ed439ccffd9aeb6e47ab658" kindref="member">model_defined</ref>;</highlight></codeline>
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-<codeline lineno="21" refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" kindref="member">freq_defined</ref>;</highlight></codeline>
-<codeline lineno="22" refid="class_regular_orbit_1a3b7e9af0e487571264d4e1ee515e8dc7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a3b7e9af0e487571264d4e1ee515e8dc7" kindref="member">angle_defined</ref>;</highlight></codeline>
-<codeline lineno="23" refid="class_regular_orbit_1ac082d931f0738f9376037c63b462c7a9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1ac082d931f0738f9376037c63b462c7a9" kindref="member">biorth_defined</ref>;</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"></highlight></codeline>
-<codeline lineno="25" refid="class_regular_orbit_1a36731e792d0e5f2d0ffbb92fcfdc9ea9" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_regular_orbit_1a36731e792d0e5f2d0ffbb92fcfdc9ea9" kindref="member">action</ref>,<sp/><ref refid="class_regular_orbit_1aa2af630a8524ec47bc107215fc493aa9" kindref="member">freq</ref>;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="27" refid="class_regular_orbit_1ad8ba95ec71344964d1be3fc3b1fd9e78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1ad8ba95ec71344964d1be3fc3b1fd9e78" kindref="member">~RegularOrbit</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_regular_orbit_1a2452e833ddea6e4536356a441d3f96f2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a2452e833ddea6e4536356a441d3f96f2" kindref="member">get_action</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="30" refid="class_regular_orbit_1a9a65442827224e08daf0d2b06e49cbcb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a9a65442827224e08daf0d2b06e49cbcb" kindref="member">get_freq</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="31" refid="class_regular_orbit_1a54adbdf914ec384fa91076183d57865c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a54adbdf914ec384fa91076183d57865c" kindref="member">get_angle</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Error<sp/>function</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_regular_orbit_1aa563a76703ed65bacc1d91b3bb8d453f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1aa563a76703ed65bacc1d91b3bb8d453f" kindref="member">bomb</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal">*<sp/><sp/><sp/>s);</highlight></codeline>
-<codeline lineno="35" refid="class_regular_orbit_1a9b2807823337bac92607b15103486631" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a9b2807823337bac92607b15103486631" kindref="member">bomb</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>s);</highlight></codeline>
-<codeline lineno="36" refid="class_regular_orbit_1a30d745503e523915a2e3375dac289ea2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a30d745503e523915a2e3375dac289ea2" kindref="member">warn</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>fct,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">string</highlight><highlight class="normal">&amp;<sp/>msg);</highlight></codeline>
-<codeline lineno="37"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="39" refid="struct_a_n_g_l_e___g_r_i_d" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_a_n_g_l_e___g_r_i_d" kindref="compound">ANGLE_GRID</ref><sp/>{</highlight></codeline>
-<codeline lineno="40" refid="struct_a_n_g_l_e___g_r_i_d_1aa5941c7adf3d43db5811ca361e6bc8ab" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="struct_a_n_g_l_e___g_r_i_d_1aa5941c7adf3d43db5811ca361e6bc8ab" kindref="member">t</ref>;<sp/><sp/></highlight><highlight class="comment">//<sp/>RECS</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="struct_a_n_g_l_e___g_r_i_d_1ace474dd0b39aa4c5f939009360249239" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="struct_a_n_g_l_e___g_r_i_d_1ace474dd0b39aa4c5f939009360249239" kindref="member">w1</ref>;</highlight></codeline>
-<codeline lineno="42" refid="struct_a_n_g_l_e___g_r_i_d_1a0eec6a4193840326d6d72c276383204d" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="struct_a_n_g_l_e___g_r_i_d_1a0eec6a4193840326d6d72c276383204d" kindref="member">dw1dt</ref>;</highlight></codeline>
-<codeline lineno="43" refid="struct_a_n_g_l_e___g_r_i_d_1a3e9edd9f3646d9d8a013c2d952b52ae6" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="struct_a_n_g_l_e___g_r_i_d_1a3e9edd9f3646d9d8a013c2d952b52ae6" kindref="member">f</ref>;</highlight></codeline>
-<codeline lineno="44" refid="struct_a_n_g_l_e___g_r_i_d_1ab6b8ff82d7bb56e1d72f144d75436031" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="struct_a_n_g_l_e___g_r_i_d_1ab6b8ff82d7bb56e1d72f144d75436031" kindref="member">r</ref>;</highlight></codeline>
-<codeline lineno="45" refid="struct_a_n_g_l_e___g_r_i_d_1a8e565b0d09b14aa9117063a83f6d9422" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::MatrixXd<sp/><ref refid="struct_a_n_g_l_e___g_r_i_d_1a8e565b0d09b14aa9117063a83f6d9422" kindref="member">fr</ref>;<sp/></highlight><highlight class="comment">//<sp/>NMAX<sp/>x<sp/>RECS</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="46" refid="struct_a_n_g_l_e___g_r_i_d_1acdc1c8430b81e282ba8172063d00cd58" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_a_n_g_l_e___g_r_i_d_1acdc1c8430b81e282ba8172063d00cd58" kindref="member">num</ref>;</highlight></codeline>
-<codeline lineno="47"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_spherical_orbit" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit" kindref="compound">RegularOrbit</ref></highlight></codeline>
-<codeline lineno="52"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="55" refid="class_spherical_orbit_1a048facb564d4478c59807275c78adc07" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a048facb564d4478c59807275c78adc07" kindref="member">energy</ref>;</highlight></codeline>
-<codeline lineno="56" refid="class_spherical_orbit_1a2042d55bdd18f72ec73e731c6308fde2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a2042d55bdd18f72ec73e731c6308fde2" kindref="member">kappa</ref>;</highlight></codeline>
-<codeline lineno="57" refid="class_spherical_orbit_1aa913defb5be85150e1336f2477b153f4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aa913defb5be85150e1336f2477b153f4" kindref="member">beta</ref>;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="59" refid="class_spherical_orbit_1a9829f848d1f29edcb804198552ef9b32" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a9829f848d1f29edcb804198552ef9b32" kindref="member">jmax</ref>;</highlight></codeline>
-<codeline lineno="60" refid="class_spherical_orbit_1a7a08299d1a534f4e1f9328e4724d5c5d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a7a08299d1a534f4e1f9328e4724d5c5d" kindref="member">r_peri</ref>;</highlight></codeline>
-<codeline lineno="61" refid="class_spherical_orbit_1a95c389a42552232fd13d84ef705286aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a95c389a42552232fd13d84ef705286aa" kindref="member">r_apo</ref>;</highlight></codeline>
-<codeline lineno="62" refid="class_spherical_orbit_1a7e892a5f4476fbef3725a50da9369fc7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a7e892a5f4476fbef3725a50da9369fc7" kindref="member">r_circ</ref>;</highlight></codeline>
-<codeline lineno="63" refid="class_spherical_orbit_1a9c8d85b92b505ce05abb9f3138247cc7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1af39c49b836eeb1ce0614f7ea6e8b211a" kindref="member">ap</ref>,<sp/><ref refid="class_spherical_orbit_1a9c8d85b92b505ce05abb9f3138247cc7" kindref="member">am</ref>,<sp/><ref refid="class_spherical_orbit_1a95caca99e2f52ca5dc316e1cb4df642c" kindref="member">sp</ref>,<sp/><ref refid="class_spherical_orbit_1a46ff0b102b9349756638f98a9d209670" kindref="member">sm</ref>;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"></highlight></codeline>
-<codeline lineno="65" refid="class_spherical_orbit_1a26c403b5b97d88adfbac1a4ebca2d454" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;AxiSymModel&gt;<sp/><sp/><ref refid="class_spherical_orbit_1a26c403b5b97d88adfbac1a4ebca2d454" kindref="member">model</ref>;</highlight></codeline>
-<codeline lineno="66" refid="class_spherical_orbit_1aac77ad858f708436e2e55c6f0f3afc72" refkind="member"><highlight class="normal"><sp/><sp/>std::shared_ptr&lt;AxiSymBiorth&gt;<sp/><ref refid="class_spherical_orbit_1aac77ad858f708436e2e55c6f0f3afc72" kindref="member">biorth</ref>;</highlight></codeline>
-<codeline lineno="67" refid="class_spherical_orbit_1a3cd45894a025e1a8a7c957e711943049" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a3cd45894a025e1a8a7c957e711943049" kindref="member">RECUR</ref>;</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"></highlight></codeline>
-<codeline lineno="69" refid="class_spherical_orbit_1a74a30de9d79c264f974cfa31d591cc28" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a74a30de9d79c264f974cfa31d591cc28" kindref="member">compute_action</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="70" refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="71" refid="class_spherical_orbit_1ad709d79b2eaa947c15a401f374f292a1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1ad709d79b2eaa947c15a401f374f292a1" kindref="member">compute_angles</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="72" refid="class_spherical_orbit_1a7611bd9f22dd2158221c53cc806a8279" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a7611bd9f22dd2158221c53cc806a8279" kindref="member">compute_angles_old</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="73" refid="class_spherical_orbit_1a6eedd9c212bba758ad86528dd9a9ca89" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a6eedd9c212bba758ad86528dd9a9ca89" kindref="member">compute_freq_epi</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="74" refid="class_spherical_orbit_1a55720261f0c18c17d688471617901a81" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a55720261f0c18c17d688471617901a81" kindref="member">compute_angles_epi</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="75" refid="class_spherical_orbit_1a6a082a6702127365171f9803dc19d295" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a6a082a6702127365171f9803dc19d295" kindref="member">compute_biorth</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"></highlight></codeline>
-<codeline lineno="77" refid="class_spherical_orbit_1a24d27c2c0fd8f7c505967405e2024bc3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_a_n_g_l_e___g_r_i_d" kindref="compound">ANGLE_GRID</ref><sp/><ref refid="class_spherical_orbit_1a24d27c2c0fd8f7c505967405e2024bc3" kindref="member">angle_grid</ref>;</highlight></codeline>
-<codeline lineno="78" refid="class_spherical_orbit_1af48acd1046a742a5b866dce6a97cb591" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1af48acd1046a742a5b866dce6a97cb591" kindref="member">recs</ref>;</highlight></codeline>
-<codeline lineno="79" refid="class_spherical_orbit_1a9fd120d1821294d7d0295c613ff56f20" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a9fd120d1821294d7d0295c613ff56f20" kindref="member">nmax</ref>;</highlight></codeline>
-<codeline lineno="80" refid="class_spherical_orbit_1aa38fbb17ffcbda5f74811be5f4683240" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aa38fbb17ffcbda5f74811be5f4683240" kindref="member">nbsct</ref>;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"></highlight></codeline>
-<codeline lineno="82" refid="class_spherical_orbit_1a0d8e941e8488e6926c2f9c979dba823b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a0d8e941e8488e6926c2f9c979dba823b" kindref="member">l</ref>;</highlight></codeline>
-<codeline lineno="83" refid="class_spherical_orbit_1aa9f4e01668d17d3bd2074e6f5a63bd78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aa9f4e01668d17d3bd2074e6f5a63bd78" kindref="member">l1s</ref>,<sp/><ref refid="class_spherical_orbit_1ab7a7e6caeb9cc6067b5e970d06ee274e" kindref="member">l2s</ref>;</highlight></codeline>
-<codeline lineno="84" refid="class_spherical_orbit_1a888c8723e845c0fd350e5139ba85c5dc" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::VectorXd<sp/><ref refid="class_spherical_orbit_1a888c8723e845c0fd350e5139ba85c5dc" kindref="member">cosvec</ref>;</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight></codeline>
-<codeline lineno="86" refid="class_spherical_orbit_1a91f369c229705b4c08f2770885796407" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_gauss_quad" kindref="compound">GaussQuad</ref><sp/><ref refid="class_spherical_orbit_1a91f369c229705b4c08f2770885796407" kindref="member">Gkn</ref>;</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88" refid="class_spherical_orbit_1aed738a433fd88f716a0d098889cad129" refkind="member"><highlight class="normal"><sp/><sp/>std::tuple&lt;double,<sp/>double,<sp/>bool&gt;<sp/><ref refid="class_spherical_orbit_1aed738a433fd88f716a0d098889cad129" kindref="member">search</ref></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/>(std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>func,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmin,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rmax);</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="93" refid="class_spherical_orbit_1a5e4bac9630d0d61a4ec0dac09f718768" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_spherical_orbit_1a5e4bac9630d0d61a4ec0dac09f718768" kindref="member">Nseg</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Number<sp/>of<sp/>trial<sp/>segments<sp/>for<sp/>root<sp/>finding<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"></highlight></codeline>
-<codeline lineno="95" refid="class_spherical_orbit_1a9ea9164cb2807242f014890f57466e3c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a9ea9164cb2807242f014890f57466e3c" kindref="member">RMAXF</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Factors<sp/>of<sp/>model<sp/>rmax<sp/>for<sp/>upper<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>turning<sp/>point<sp/>search<sp/>[default=3.0]</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="97"><highlight class="normal"></highlight></codeline>
-<codeline lineno="98" refid="class_spherical_orbit_1a47096441d5ff6429b78469f619ea5036" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a47096441d5ff6429b78469f619ea5036" kindref="member">tol</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Root<sp/>finder<sp/>tolerance<sp/>[default=1.0e-8]</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_spherical_orbit_1a8d919cb5f04ac23999708505c8f51df4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a8d919cb5f04ac23999708505c8f51df4" kindref="member">ZFRAC</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Factor<sp/>for<sp/>minimum<sp/>radius</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>turning<sp/>point<sp/>search<sp/>[default=1.0e-3]</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103" refid="class_spherical_orbit_1aed7f09cfd1f6f37695343a92e9f424bb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aed7f09cfd1f6f37695343a92e9f424bb" kindref="member">tolnr</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>r_apo<sp/>location<sp/>using<sp/>Newton-Raphson<sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>refinement<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Error<sp/>if<sp/>Energy<sp/>&lt;<sp/>Phi(Rmin)<sp/>[default=true]</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="107" refid="class_spherical_orbit_1a977f3c24967e47f584dd5959ce048d90" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a977f3c24967e47f584dd5959ce048d90" kindref="member">guard</ref>;</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"></highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Constructors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113" refid="class_spherical_orbit_1aa92813d0179717d144afe5ad36e89ba6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_orbit_1aa92813d0179717d144afe5ad36e89ba6" kindref="member">SphericalOrbit</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="114" refid="class_spherical_orbit_1a45da5ecee2f38fabe8722ecc3f23fe31" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_orbit_1a45da5ecee2f38fabe8722ecc3f23fe31" kindref="member">SphericalOrbit</ref>(std::shared_ptr&lt;AxiSymModel&gt;<sp/><ref refid="class_spherical_orbit_1a26c403b5b97d88adfbac1a4ebca2d454" kindref="member">model</ref>);</highlight></codeline>
-<codeline lineno="115" refid="class_spherical_orbit_1a85d2fe4f312bd92e03adbb961a5bf94a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_orbit_1a85d2fe4f312bd92e03adbb961a5bf94a" kindref="member">SphericalOrbit</ref>(std::shared_ptr&lt;AxiSymModel&gt;<sp/><ref refid="class_spherical_orbit_1a26c403b5b97d88adfbac1a4ebca2d454" kindref="member">model</ref>,</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a18b10a692bf34008fd93352895fe0303" kindref="member">Energy</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a2042d55bdd18f72ec73e731c6308fde2" kindref="member">kappa</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aa913defb5be85150e1336f2477b153f4" kindref="member">beta</ref><sp/>=<sp/>0.0);</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118" refid="class_spherical_orbit_1a485e7d252e6d211db1f7caeb1a6e39d3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a485e7d252e6d211db1f7caeb1a6e39d3" kindref="member">~SphericalOrbit</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight></codeline>
-<codeline lineno="120" refid="class_spherical_orbit_1a2c2d7a39bf5e71bae2871521b952df16" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_orbit_1a2c2d7a39bf5e71bae2871521b952df16" kindref="member">SphericalOrbit</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="121" refid="class_spherical_orbit_1ae2322f082b81c2456011c2dcfe04258b" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref><sp/>&amp;<ref refid="class_spherical_orbit_1ae2322f082b81c2456011c2dcfe04258b" kindref="member">operator=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit" kindref="compound">SphericalOrbit</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-<codeline lineno="125"><highlight class="normal"></highlight></codeline>
-<codeline lineno="131" refid="class_spherical_orbit_1a1d4224e324c4b8884ce49799c9c6398a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a1d4224e324c4b8884ce49799c9c6398a" kindref="member">get_action</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&gt;<ref refid="class_regular_orbit_1a6d582e67d7baeece1ffc2e75a8ccaaf3" kindref="member">dof</ref>)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_regular_orbit_1aa563a76703ed65bacc1d91b3bb8d453f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;actions<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;0<sp/>or<sp/>i&gt;2)<sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_regular_orbit_1aa563a76703ed65bacc1d91b3bb8d453f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;action<sp/>index<sp/>must<sp/>be<sp/>[0,1,2]&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_regular_orbit_1a0cd178fd27367f0a937b13b12d35d501" kindref="member">action_defined</ref>)<sp/><ref refid="class_spherical_orbit_1a74a30de9d79c264f974cfa31d591cc28" kindref="member">compute_action</ref>();</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1a36731e792d0e5f2d0ffbb92fcfdc9ea9" kindref="member">action</ref>[i];</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="139"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="class_spherical_orbit_1a71a90f4040edee317a91cc5fde9b6520" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a71a90f4040edee317a91cc5fde9b6520" kindref="member">get_w1</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>vr);</highlight></codeline>
-<codeline lineno="142"><highlight class="normal"></highlight></codeline>
-<codeline lineno="148" refid="class_spherical_orbit_1a7045fa0c5a89883c41487ecb6730fa88" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a7045fa0c5a89883c41487ecb6730fa88" kindref="member">get_freq</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&gt;<ref refid="class_regular_orbit_1a6d582e67d7baeece1ffc2e75a8ccaaf3" kindref="member">dof</ref>)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_regular_orbit_1aa563a76703ed65bacc1d91b3bb8d453f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;frequencies<sp/>not<sp/>defined!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(i&lt;0<sp/>or<sp/>i&gt;2)<sp/><sp/><sp/><sp/><ref refid="class_regular_orbit_1aa563a76703ed65bacc1d91b3bb8d453f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;frequency<sp/>index<sp/>must<sp/>be<sp/>[0,1,2]&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" kindref="member">freq_defined</ref>)<sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>();</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_regular_orbit_1aa2af630a8524ec47bc107215fc493aa9" kindref="member">freq</ref>[i];</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"></highlight></codeline>
-<codeline lineno="170" refid="class_spherical_orbit_1a0912284cfc44a406823491c5e64d9b53" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a0912284cfc44a406823491c5e64d9b53" kindref="member">get_angle</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>time);</highlight></codeline>
-<codeline lineno="172"></codeline>
-<codeline lineno="174" refid="class_spherical_orbit_1a4b0a36c39baf45a551c57e485303a0d9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a4b0a36c39baf45a551c57e485303a0d9" kindref="member">new_orbit</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a18b10a692bf34008fd93352895fe0303" kindref="member">Energy</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a2042d55bdd18f72ec73e731c6308fde2" kindref="member">kappa</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aa913defb5be85150e1336f2477b153f4" kindref="member">beta</ref><sp/>=<sp/>0.0);</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight></codeline>
-<codeline lineno="177" refid="class_spherical_orbit_1a7b66fc5ad316212f4b869fbd8ab5837b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a7b66fc5ad316212f4b869fbd8ab5837b" kindref="member">set_biorth</ref>(std::shared_ptr&lt;AxiSymBiorth&gt;<sp/>type,</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ll,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>max,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>recur<sp/>=<sp/>0)<sp/></highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/><ref refid="class_spherical_orbit_1a9fd120d1821294d7d0295c613ff56f20" kindref="member">nmax</ref><sp/>=<sp/>max;<sp/><ref refid="class_spherical_orbit_1a0d8e941e8488e6926c2f9c979dba823b" kindref="member">l</ref><sp/>=<sp/>ll;<sp/><ref refid="class_spherical_orbit_1aac77ad858f708436e2e55c6f0f3afc72" kindref="member">biorth</ref><sp/>=<sp/>type;<sp/><ref refid="class_spherical_orbit_1a3cd45894a025e1a8a7c957e711943049" kindref="member">RECUR</ref><sp/>=<sp/>recur;<sp/></highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_regular_orbit_1ac082d931f0738f9376037c63b462c7a9" kindref="member">biorth_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"></highlight></codeline>
-<codeline lineno="183" refid="class_spherical_orbit_1ab915dbb599a2163f3fa7d599b1019932" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1ab915dbb599a2163f3fa7d599b1019932" kindref="member">set_numerical_params</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>RECS=64,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NMAX=40,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>NBSCT=3)</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"><sp/><sp/><sp/><sp/>{<sp/><ref refid="class_spherical_orbit_1af48acd1046a742a5b866dce6a97cb591" kindref="member">recs</ref>=RECS;<sp/><ref refid="class_spherical_orbit_1a9fd120d1821294d7d0295c613ff56f20" kindref="member">nmax</ref>=NMAX;<sp/><ref refid="class_spherical_orbit_1aa38fbb17ffcbda5f74811be5f4683240" kindref="member">nbsct</ref>=NBSCT;}</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"></highlight></codeline>
-<codeline lineno="186" refid="class_spherical_orbit_1aaa0c762462f069f9452ce0889d919767" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aaa0c762462f069f9452ce0889d919767" kindref="member">pot_trans</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l1,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l2,<sp/>std::function&lt;</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)&gt;<sp/>func<sp/>);</highlight></codeline>
-<codeline lineno="187" refid="class_spherical_orbit_1a295374e8f807a373d2cc8cc285036518" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a295374e8f807a373d2cc8cc285036518" kindref="member">pot_trans</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l1,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l2,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n<sp/>);</highlight></codeline>
-<codeline lineno="188" refid="class_spherical_orbit_1a738751098aa6d2245d58cdb1bd5a93ca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><sp/><sp/><ref refid="class_spherical_orbit_1a738751098aa6d2245d58cdb1bd5a93ca" kindref="member">pot_trans</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l1,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l2,<sp/>Eigen::VectorXd&amp;<sp/>t);</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"></highlight></codeline>
-<codeline lineno="191" refid="class_spherical_orbit_1a6bcdf37f55f92a208b16b22a39c6140b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_a_n_g_l_e___g_r_i_d" kindref="compound">ANGLE_GRID</ref><sp/>*<sp/><ref refid="class_spherical_orbit_1a6bcdf37f55f92a208b16b22a39c6140b" kindref="member">get_angle_grid</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" kindref="member">freq_defined</ref>)<sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>();</highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(!<ref refid="class_regular_orbit_1a3b7e9af0e487571264d4e1ee515e8dc7" kindref="member">angle_defined</ref>)<sp/><ref refid="class_spherical_orbit_1ad709d79b2eaa947c15a401f374f292a1" kindref="member">compute_angles</ref>();</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_spherical_orbit_1a24d27c2c0fd8f7c505967405e2024bc3" kindref="member">angle_grid</ref>;</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"></highlight></codeline>
-<codeline lineno="200"><highlight class="normal"></highlight></codeline>
-<codeline lineno="202" refid="class_spherical_orbit_1a18b10a692bf34008fd93352895fe0303" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a18b10a692bf34008fd93352895fe0303" kindref="member">Energy</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a048facb564d4478c59807275c78adc07" kindref="member">energy</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"></highlight></codeline>
-<codeline lineno="205" refid="class_spherical_orbit_1a448149f2cf5ef12ff9771c3021022cfe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a448149f2cf5ef12ff9771c3021022cfe" kindref="member">AngMom</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" kindref="member">freq_defined</ref><sp/>==<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>();</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a9829f848d1f29edcb804198552ef9b32" kindref="member">jmax</ref>*<ref refid="class_spherical_orbit_1a2042d55bdd18f72ec73e731c6308fde2" kindref="member">kappa</ref>;</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"></highlight></codeline>
-<codeline lineno="212" refid="class_spherical_orbit_1a56729c1aaf0a9f12f559a7f5058fa238" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a56729c1aaf0a9f12f559a7f5058fa238" kindref="member">Jmax</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" kindref="member">freq_defined</ref><sp/>==<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>();</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a9829f848d1f29edcb804198552ef9b32" kindref="member">jmax</ref>;</highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"></highlight></codeline>
-<codeline lineno="219" refid="class_spherical_orbit_1a1429e6d175fe830d9be837c305f6bf83" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a1429e6d175fe830d9be837c305f6bf83" kindref="member">Kappa</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a2042d55bdd18f72ec73e731c6308fde2" kindref="member">kappa</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"></highlight></codeline>
-<codeline lineno="222" refid="class_spherical_orbit_1a974b256df68772b882efba91c4e82e1d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a974b256df68772b882efba91c4e82e1d" kindref="member">Beta</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1aa913defb5be85150e1336f2477b153f4" kindref="member">beta</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="225" refid="class_spherical_orbit_1a7df6bd5832dd7945fc5e1973de218dfe" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a7df6bd5832dd7945fc5e1973de218dfe" kindref="member">peri</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"><sp/><sp/>{<sp/></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" kindref="member">freq_defined</ref><sp/>==<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>();</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a7a08299d1a534f4e1f9328e4724d5c5d" kindref="member">r_peri</ref>;</highlight></codeline>
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-<codeline lineno="232" refid="class_spherical_orbit_1a426e133cf3cc975c94d645a31ad2fff3" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a426e133cf3cc975c94d645a31ad2fff3" kindref="member">apo</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" kindref="member">freq_defined</ref><sp/>==<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>();</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a95c389a42552232fd13d84ef705286aa" kindref="member">r_apo</ref>;</highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"></highlight></codeline>
-<codeline lineno="239" refid="class_spherical_orbit_1a4e4c91a9637446127df297eae76e0223" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a4e4c91a9637446127df297eae76e0223" kindref="member">circ</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight></codeline>
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-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_regular_orbit_1a12752d92d9921d72faaecdb3fa78b7da" kindref="member">freq_defined</ref><sp/>==<sp/></highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/><ref refid="class_spherical_orbit_1aadf7adf96ca6fd54b8515ca0c2c11839" kindref="member">compute_freq</ref>();</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_spherical_orbit_1a7e892a5f4476fbef3725a50da9369fc7" kindref="member">r_circ</ref>;</highlight></codeline>
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-<codeline lineno="252"><highlight class="normal"></highlight></codeline>
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diff --git a/doxyxml/parse_version_string_8_h.xml b/doxyxml/parse_version_string_8_h.xml
deleted file mode 100644
index 780c7b9..0000000
--- a/doxyxml/parse_version_string_8_h.xml
+++ /dev/null
@@ -1,60 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="parse_version_string_8_h" kind="file" language="C++">
-    <compoundname>parseVersionString.H</compoundname>
-    <includes local="no">vector</includes>
-    <includes local="no">string</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/parseVersionString.H</label>
-        <link refid="parse_version_string_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
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-        <label>string</label>
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-        <label>vector</label>
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-    </incdepgraph>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="parse_version_string_8_h_1aa20fe04f63ff9e758e9bed0d0e613caf" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>std::vector&lt; int &gt;</type>
-        <definition>std::vector&lt; int &gt; parseVersionString</definition>
-        <argsstring>(const std::string &amp;version_str)</argsstring>
-        <name>parseVersionString</name>
-        <param>
-          <type>const std::string &amp;</type>
-          <declname>version_str</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
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-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/parseVersionString.H" line="7" column="13" declfile="/home/weinberg/Projects/EXP/include/parseVersionString.H" declline="7" declcolumn="13"/>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_parseVersionString_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_parseVersionString_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;string&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="parse_version_string_8_h_1aa20fe04f63ff9e758e9bed0d0e613caf" refkind="member"><highlight class="normal">std::vector&lt;int&gt;<sp/><ref refid="parse_version_string_8_h_1aa20fe04f63ff9e758e9bed0d0e613caf" kindref="member">parseVersionString</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>version_str);</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
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diff --git a/doxyxml/permutation_8_h.xml b/doxyxml/permutation_8_h.xml
deleted file mode 100644
index c678488..0000000
--- a/doxyxml/permutation_8_h.xml
+++ /dev/null
@@ -1,87 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="permutation_8_h" kind="file" language="C++">
-    <compoundname>permutation.H</compoundname>
-    <includes local="no">algorithm</includes>
-    <includes local="no">numeric</includes>
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-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/permutation.H</label>
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-        <label>numeric</label>
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-      <node id="4">
-        <label>random</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="classpermutation" prot="public">permutation</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_PERMUTATION_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_PERMUTATION_H_</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;algorithm&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;numeric&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;random&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13" refid="classpermutation" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpermutation" kindref="compound">permutation</ref></highlight></codeline>
-<codeline lineno="14"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="classpermutation_1abc5c92591820f37ba377b06f622f6cad" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classpermutation_1abc5c92591820f37ba377b06f622f6cad" kindref="member">permutation</ref>(</highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/>full=</highlight><highlight class="keyword">false</highlight><highlight class="normal">)<sp/>:<sp/><ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>(n),<sp/><ref refid="classpermutation_1a44dc1dbc08633d19ab1e8eef0825b38f" kindref="member">g</ref>(std::random_device{}())</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(full)<sp/><ref refid="classpermutation_1aff5c189cdce245b00d11ecd9cd1e186d" kindref="member">seed19937</ref>();<sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Hard-core<sp/>mt19937<sp/>initialization</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/>std::iota(<ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>.begin(),<sp/><ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>.end(),<sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal">(0));</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="classpermutation_1a4d9c363b55084a0c60d0a3f2056dd171" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classpermutation_1a4d9c363b55084a0c60d0a3f2056dd171" kindref="member">shuffle</ref>()<sp/>{</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a20705b4372a9940d34a164bae541be1f" kindref="member">myid</ref>==0)<sp/>std::shuffle(<ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>.begin(),<sp/><ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>.end(),<sp/><ref refid="classpermutation_1a44dc1dbc08633d19ab1e8eef0825b38f" kindref="member">g</ref>);</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="localmpi_8_h_1a31bfe068640b411bea3df0d69177ded5" kindref="member">numprocs</ref>&gt;1)</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>MPI_Bcast(<ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>.data(),<sp/><ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>.size(),<sp/>MPI_UNSIGNED,<sp/>0,<sp/>MPI_COMM_WORLD);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="classpermutation_1adbea72eabd3083c77ba494cc15900ad6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><ref refid="classpermutation_1adbea72eabd3083c77ba494cc15900ad6" kindref="member">operator[]</ref>(</highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/>n)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>[n];<sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="44" refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;size_t&gt;<sp/><ref refid="classpermutation_1a72414b581a3bef4c01631129e26a9d0f" kindref="member">perm</ref>;</highlight></codeline>
-<codeline lineno="45" refid="classpermutation_1a44dc1dbc08633d19ab1e8eef0825b38f" refkind="member"><highlight class="normal"><sp/><sp/>std::mt19937<sp/><ref refid="classpermutation_1a44dc1dbc08633d19ab1e8eef0825b38f" kindref="member">g</ref>;</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="classpermutation_1aff5c189cdce245b00d11ecd9cd1e186d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classpermutation_1aff5c189cdce245b00d11ecd9cd1e186d" kindref="member">seed19937</ref>()</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>A<sp/>hardware<sp/>random<sp/>#<sp/>generator,<sp/>hopefully</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/><sp/><sp/>std::random_device<sp/>rdev;</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Generate<sp/>an<sp/>array<sp/>that<sp/>fills<sp/>the<sp/>state</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/>std::seed_seq::result_type<sp/>data[std::mt19937::state_size];</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Generate<sp/>random<sp/>number<sp/>for<sp/>the<sp/>full<sp/>state</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/>std::generate_n(data,<sp/>std::mt19937::state_size,<sp/>std::ref(rdev));</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Fill<sp/>the<sp/>sequence</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/><sp/><sp/>std::seed_seq<sp/>prng_seed<sp/>(data,<sp/>data<sp/>+<sp/>std::mt19937::state_size);</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Finally,<sp/>seed<sp/>the<sp/>mt19937</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="classpermutation_1a44dc1dbc08633d19ab1e8eef0825b38f" kindref="member">g</ref>.seed(prng_seed);</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="65"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/permutation.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/phase_8_h.xml b/doxyxml/phase_8_h.xml
deleted file mode 100644
index 4408da8..0000000
--- a/doxyxml/phase_8_h.xml
+++ /dev/null
@@ -1,520 +0,0 @@
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-    <compoundname>phase.H</compoundname>
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-    <includes local="no">Eigen/Eigen</includes>
-    <includes refid="numerical_8_h" local="no">numerical.H</includes>
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-    <innerclass refid="class_ensemble" prot="public">Ensemble</innerclass>
-    <innerclass refid="class_frame___rotation" prot="public">Frame_Rotation</innerclass>
-    <innerclass refid="class_phase" prot="public">Phase</innerclass>
-    <sectiondef kind="typedef">
-      <memberdef kind="typedef" id="phase_8_h_1a32b97e03bb111cd5775ac6919dc8db32" prot="public" static="no">
-        <type>Eigen::Vector3d(*</type>
-        <definition>typedef Eigen::Vector3d(* force_func_ptr) (double, Eigen::Vector3d &amp;, Eigen::Vector3d &amp;)</definition>
-        <argsstring>)(double, Eigen::Vector3d &amp;, Eigen::Vector3d &amp;)</argsstring>
-        <name>force_func_ptr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="13" column="9" bodyfile="/home/weinberg/Projects/EXP/include/phase.H" bodystart="13" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="phase_8_h_1a836f1515043416409e8e3c93004e4eee" prot="public" static="no">
-        <type>int(*</type>
-        <definition>typedef int(* freezing_function) (Phase &amp;)</definition>
-        <argsstring>)(Phase &amp;)</argsstring>
-        <name>freezing_function</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="162" column="9" bodyfile="/home/weinberg/Projects/EXP/include/phase.H" bodystart="162" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="typedef" id="phase_8_h_1aee87d18ed4086c87efe06d6d4c106d30" prot="public" static="no">
-        <type>double(*</type>
-        <definition>typedef double(* pot_func_ptr) (double, Eigen::Vector3d &amp;)</definition>
-        <argsstring>)(double, Eigen::Vector3d &amp;)</argsstring>
-        <name>pot_func_ptr</name>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="14" column="9" bodyfile="/home/weinberg/Projects/EXP/include/phase.H" bodystart="14" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="phase_8_h_1af915d907d2645c8177ca72add6eaf382" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double epicyclic_kappa</definition>
-        <argsstring>(double)</argsstring>
-        <name>epicyclic_kappa</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="137" column="8" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="137" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="phase_8_h_1a81b58cc2788dff5c1255bec126c42381" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void forward_interp</definition>
-        <argsstring>(double, double, double, double, double, double, double, double &amp;, double &amp;)</argsstring>
-        <name>forward_interp</name>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <param>
-          <type>double &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="230" column="6" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="230" declcolumn="6"/>
-      </memberdef>
-      <memberdef kind="function" id="phase_8_h_1a456f1226446218a175a6762c82951359" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double inverse_interp_zero</definition>
-        <argsstring>(double, double, double, double, double, double)</argsstring>
-        <name>inverse_interp_zero</name>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="227" column="8" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="227" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="phase_8_h_1aed9e4578035030ee3f253ac13ae80dee" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void Newton</definition>
-        <argsstring>(double, Eigen::VectorXd &amp;, Eigen::VectorXd &amp;)</argsstring>
-        <name>Newton</name>
-        <param>
-          <type>double</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <param>
-          <type>Eigen::VectorXd &amp;</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="134" column="6" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="134" declcolumn="6"/>
-      </memberdef>
-      <memberdef kind="function" id="phase_8_h_1a0c9d268d5ed44daa11f4fb509da934d5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Oort_A</definition>
-        <argsstring>(double)</argsstring>
-        <name>Oort_A</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="138" column="8" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="138" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="phase_8_h_1a3377e87f757fd0a9b2eedfa000b28db0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Oort_B</definition>
-        <argsstring>(double)</argsstring>
-        <name>Oort_B</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="139" column="8" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="139" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="phase_8_h_1aa7e32e3c67df0b9093a055eccd20062a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double v_circ</definition>
-        <argsstring>(double)</argsstring>
-        <name>v_circ</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="135" column="8" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="135" declcolumn="8"/>
-        <referencedby refid="class_frame___rotation_1ade2f22db7a7fbf631603272e4504ef8c" compoundref="phase_8_h" startline="151" endline="157">Frame_Rotation::set_corotation</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="phase_8_h_1a7a47c6bd8133e3b423cca596337e31de" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double vertical_kappa</definition>
-        <argsstring>(double)</argsstring>
-        <name>vertical_kappa</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="136" column="8" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="136" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="phase_8_h_1aa1b475fba2aeb3e51b4282041ae4c9d4" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>Eigen::Matrix3d</type>
-        <definition>Eigen::Matrix3d z_Rotation</definition>
-        <argsstring>(double)</argsstring>
-        <name>z_Rotation</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/phase.H" line="161" column="17" declfile="/home/weinberg/Projects/EXP/include/phase.H" declline="161" declcolumn="17"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_phase_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_phase_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;ostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;vector&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="numerical_8_h" kindref="compound">numerical.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_ensemble" kindref="compound">Ensemble</ref>;</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13" refid="phase_8_h_1a32b97e03bb111cd5775ac6919dc8db32" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>Eigen::Vector3d<sp/>(*<ref refid="phase_8_h_1a32b97e03bb111cd5775ac6919dc8db32" kindref="member">force_func_ptr</ref>)(double,<sp/>Eigen::Vector3d<sp/>&amp;,<sp/>Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="14" refid="phase_8_h_1aee87d18ed4086c87efe06d6d4c106d30" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>double<sp/>(*<ref refid="phase_8_h_1aee87d18ed4086c87efe06d6d4c106d30" kindref="member">pot_func_ptr</ref>)(double,<sp/>Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_phase" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_phase" kindref="compound">Phase</ref></highlight></codeline>
-<codeline lineno="17"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="19" refid="class_phase_1ac2eafa4f03d8c16a4aca44f74b4a967d" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_phase_1ac2eafa4f03d8c16a4aca44f74b4a967d" kindref="member">x</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>position<sp/>vector</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" kindref="member">v</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>velocity<sp/>vector</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_phase_1aad2f2a73f6db7e2f17c75333060aa169" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1aad2f2a73f6db7e2f17c75333060aa169" kindref="member">m</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>mass</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_phase_1a4cf8c6b0fd4c4da034b72c6bfca09873" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a4cf8c6b0fd4c4da034b72c6bfca09873" kindref="member">t</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>current<sp/>time</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="class_phase_1aa938fa8bd40206ea7795cc41c6d54d17" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1aa938fa8bd40206ea7795cc41c6d54d17" kindref="member">work</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>total<sp/>work<sp/>done<sp/>so<sp/>far</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="25" refid="class_phase_1ae98afcd94db7dd25d71b0808d8e26613" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ae98afcd94db7dd25d71b0808d8e26613" kindref="member">vscale</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>typical<sp/>length<sp/>scale</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="26" refid="class_phase_1ab4b3499d2846520ef75259d6d4846edf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ab4b3499d2846520ef75259d6d4846edf" kindref="member">xscale</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>typical<sp/>speed<sp/>scale</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="class_phase_1a500b19be357810e4e3adb3ad41190096" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a500b19be357810e4e3adb3ad41190096" kindref="member">tolerance</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>desired<sp/>integration<sp/>accuracy</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="28" refid="class_phase_1a926be8ac19258cb78822e3fda918f21d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a926be8ac19258cb78822e3fda918f21d" kindref="member">potential_defined</ref>;<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>has<sp/>a<sp/>potential<sp/>been<sp/>set?</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_phase_1ae184c430909c73551c499fab2a8b4d79" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1a0aefe47f5a0d9a3f079c32493f0f7c78" kindref="member">ode_integrator</ref><sp/><ref refid="class_phase_1ae184c430909c73551c499fab2a8b4d79" kindref="member">integrator</ref>;<sp/></highlight><highlight class="comment">//<sp/>type<sp/>of<sp/>integrator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30" refid="class_phase_1ab102729d85ee2f379e4da0676fbb626a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/><ref refid="numerical_8_h_1aad116aeeb2c95bb00b91cb98b31b4d33" kindref="member">symp_integrator</ref><sp/><ref refid="class_phase_1ab102729d85ee2f379e4da0676fbb626a" kindref="member">mapping</ref>;<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>type<sp/>of<sp/>sympletic<sp/>integrator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_phase_1afcedcd1b4b0a0c85b30697cabb3c4d57" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><ref refid="class_phase_1afcedcd1b4b0a0c85b30697cabb3c4d57" kindref="member">integrator_name</ref>[8];<sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>name<sp/>of<sp/>ODE<sp/>integrator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_phase_1aef5ce55ff9c5d82dee4c2a055b3f0670" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><ref refid="class_phase_1aef5ce55ff9c5d82dee4c2a055b3f0670" kindref="member">symp_integrator_name</ref>[8];<sp/></highlight><highlight class="comment">//<sp/>name<sp/>of<sp/>SYMP<sp/>integrator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>constructors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="36" refid="class_phase_1a84da663feab796cdcc0278a0329a0d1d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase_1a84da663feab796cdcc0278a0329a0d1d" kindref="member">Phase</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="37" refid="class_phase_1aefcecb5376db4ef5ce73300c8478582d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase_1aefcecb5376db4ef5ce73300c8478582d" kindref="member">Phase</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>specification<sp/>of<sp/>model</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="42" refid="class_phase_1ab0b36fc44cd733750c8d6455f8c04e97" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ab0b36fc44cd733750c8d6455f8c04e97" kindref="member">Register_Potential</ref>(<ref refid="phase_8_h_1aee87d18ed4086c87efe06d6d4c106d30" kindref="member">pot_func_ptr</ref><sp/>p,<sp/><ref refid="phase_8_h_1a32b97e03bb111cd5775ac6919dc8db32" kindref="member">force_func_ptr</ref><sp/>f)</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/>{<ref refid="class_phase_1a926be8ac19258cb78822e3fda918f21d" kindref="member">potential_defined</ref>=1;<sp/><ref refid="class_phase_1a1148cce2c69ce12e8dcfc2cb50104df4" kindref="member">Potential</ref><sp/>=<sp/>p;<sp/><ref refid="class_phase_1a564d630d00bd8e7cde321367220631cc" kindref="member">Force</ref><sp/>=<sp/>f;}</highlight></codeline>
-<codeline lineno="44" refid="class_phase_1ac7ea03f533004115aaa1378f01281546" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/>Eigen::Vector3d<sp/><ref refid="class_phase_1ac7ea03f533004115aaa1378f01281546" kindref="member">Default_Force</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::Vector3d<sp/>&amp;,<sp/>Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="45" refid="class_phase_1ab52c7dee040dc8dc926f6ee8c5ba9157" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ab52c7dee040dc8dc926f6ee8c5ba9157" kindref="member">Default_Potential</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="46" refid="class_phase_1a1148cce2c69ce12e8dcfc2cb50104df4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1aee87d18ed4086c87efe06d6d4c106d30" kindref="member">pot_func_ptr</ref><sp/><ref refid="class_phase_1a1148cce2c69ce12e8dcfc2cb50104df4" kindref="member">Potential</ref>;</highlight></codeline>
-<codeline lineno="47" refid="class_phase_1a564d630d00bd8e7cde321367220631cc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1a32b97e03bb111cd5775ac6919dc8db32" kindref="member">force_func_ptr</ref><sp/><ref refid="class_phase_1a564d630d00bd8e7cde321367220631cc" kindref="member">Force</ref>;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>assignment<sp/>operator</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="53" refid="class_phase_1a81998232b54d3abeae6299f07bcbcd21" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/>&amp;<ref refid="class_phase_1a81998232b54d3abeae6299f07bcbcd21" kindref="member">operator=</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>access<sp/>to<sp/>protected<sp/>data</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="59" refid="class_phase_1a8cf55f19efd4ee57a0b3d9c4bd9169e1" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/>&amp;<ref refid="class_phase_1a8cf55f19efd4ee57a0b3d9c4bd9169e1" kindref="member">Position</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ac2eafa4f03d8c16a4aca44f74b4a967d" kindref="member">x</ref>;}</highlight></codeline>
-<codeline lineno="60" refid="class_phase_1ad095adbdadb0888249219fa44cf12c3c" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/>&amp;<ref refid="class_phase_1ad095adbdadb0888249219fa44cf12c3c" kindref="member">Velocity</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" kindref="member">v</ref>;}</highlight></codeline>
-<codeline lineno="61" refid="class_phase_1af716281647b0672847e2ef2df0c0bab5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_phase_1af716281647b0672847e2ef2df0c0bab5" kindref="member">Position</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ac2eafa4f03d8c16a4aca44f74b4a967d" kindref="member">x</ref>[i];}</highlight></codeline>
-<codeline lineno="62" refid="class_phase_1a5be0779b144b07c28ee02ea5fd0ceed5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_phase_1a5be0779b144b07c28ee02ea5fd0ceed5" kindref="member">Velocity</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i)<sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" kindref="member">v</ref>[i];}</highlight></codeline>
-<codeline lineno="63" refid="class_phase_1ae7992e406c97fe68c2edc0eee75e1d2c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_phase_1ae7992e406c97fe68c2edc0eee75e1d2c" kindref="member">Time</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a4cf8c6b0fd4c4da034b72c6bfca09873" kindref="member">t</ref>;}</highlight></codeline>
-<codeline lineno="64" refid="class_phase_1a7e1ff70b7e8972f8cb41773bcf124455" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_phase_1a7e1ff70b7e8972f8cb41773bcf124455" kindref="member">Work</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1aa938fa8bd40206ea7795cc41c6d54d17" kindref="member">work</ref>;}</highlight></codeline>
-<codeline lineno="65" refid="class_phase_1a672b70541196acc2b516bdd4b8b347aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;<ref refid="class_phase_1a672b70541196acc2b516bdd4b8b347aa" kindref="member">Mass</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1aad2f2a73f6db7e2f17c75333060aa169" kindref="member">m</ref>;}</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="67"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>set<sp/>and<sp/>get<sp/>the<sp/>scale<sp/>dimensions<sp/>and<sp/>tolerance</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="71" refid="class_phase_1a4b8e3b462a682a09e22bb4eaa259eef1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a4b8e3b462a682a09e22bb4eaa259eef1" kindref="member">set_Tolerance</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>tol)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{<ref refid="class_phase_1a500b19be357810e4e3adb3ad41190096" kindref="member">tolerance</ref><sp/>=<sp/>tol;}</highlight></codeline>
-<codeline lineno="72" refid="class_phase_1a7f7d12fb13b6f8b1e88a15b8874069cc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a7f7d12fb13b6f8b1e88a15b8874069cc" kindref="member">set_Xscale</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>xx)<sp/><sp/><sp/><sp/>{<ref refid="class_phase_1ab4b3499d2846520ef75259d6d4846edf" kindref="member">xscale</ref><sp/>=<sp/>xx;}</highlight></codeline>
-<codeline lineno="73" refid="class_phase_1a3efe728998b33c7fd32b329d8988e7c6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a3efe728998b33c7fd32b329d8988e7c6" kindref="member">set_Vscale</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>vv)<sp/><sp/><sp/><sp/>{<ref refid="class_phase_1ae98afcd94db7dd25d71b0808d8e26613" kindref="member">vscale</ref><sp/>=<sp/>vv;}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="75" refid="class_phase_1a25f2fa8f6916442b4ecb3b1471204930" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a25f2fa8f6916442b4ecb3b1471204930" kindref="member">get_Tolerance</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a500b19be357810e4e3adb3ad41190096" kindref="member">tolerance</ref>;}</highlight></codeline>
-<codeline lineno="76" refid="class_phase_1a2a9f6648a8164f135407d02a3afcd426" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a2a9f6648a8164f135407d02a3afcd426" kindref="member">get_Xscale</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ab4b3499d2846520ef75259d6d4846edf" kindref="member">xscale</ref>;}</highlight></codeline>
-<codeline lineno="77" refid="class_phase_1a140a214d9f1889b16ed3c35489b56027" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a140a214d9f1889b16ed3c35489b56027" kindref="member">get_Vscale</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ae98afcd94db7dd25d71b0808d8e26613" kindref="member">vscale</ref>;}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>set<sp/>or<sp/>retreive<sp/>the<sp/>ode<sp/>integrator<sp/>type</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="82" refid="class_phase_1a550ac46cfb9e852291e7c38e31408d6f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a550ac46cfb9e852291e7c38e31408d6f" kindref="member">set_Integrator</ref>(</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="83" refid="class_phase_1ade73c13e38f16d1ecb0a7602f2693fc8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*<ref refid="class_phase_1ade73c13e38f16d1ecb0a7602f2693fc8" kindref="member">get_Integrator</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>print<sp/>a<sp/>phase-space<sp/>point</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="90" refid="class_phase_1ab4cce86cfcc19eebe77b983a4eecc519" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ab4cce86cfcc19eebe77b983a4eecc519" kindref="member">print</ref>(std::ostream&amp;<sp/>out);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>rotate<sp/>frame<sp/>or<sp/>point<sp/>about<sp/>z<sp/>axis</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="95" refid="class_phase_1a8d946f613f5a3753339126d4b74eac28" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/><ref refid="class_phase_1a8d946f613f5a3753339126d4b74eac28" kindref="member">rotate_frame</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="96" refid="class_phase_1ac3240a659f385464f43ae9b941e76730" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/><ref refid="class_phase_1ac3240a659f385464f43ae9b941e76730" kindref="member">rotate_view</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="99"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="100"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>various<sp/>functions<sp/>of<sp/>the<sp/>coordinates</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="102" refid="class_phase_1ae99c2318c8f3d79c4e1ee9713d89447c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1ae99c2318c8f3d79c4e1ee9713d89447c" kindref="member">Speed</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>sqrt(<ref refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" kindref="member">v</ref>.dot(<ref refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" kindref="member">v</ref>));}</highlight></codeline>
-<codeline lineno="103" refid="class_phase_1a552eb8b28201a3d4e02708db36757660" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a552eb8b28201a3d4e02708db36757660" kindref="member">Energy</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.5*<ref refid="class_phase_1aad2f2a73f6db7e2f17c75333060aa169" kindref="member">m</ref>*<ref refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" kindref="member">v</ref>.dot(<ref refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" kindref="member">v</ref>)<sp/>+<sp/><ref refid="class_phase_1aad2f2a73f6db7e2f17c75333060aa169" kindref="member">m</ref>*(*Potential)(<ref refid="class_phase_1a4cf8c6b0fd4c4da034b72c6bfca09873" kindref="member">t</ref>,<sp/><ref refid="class_phase_1ac2eafa4f03d8c16a4aca44f74b4a967d" kindref="member">x</ref>);}</highlight></codeline>
-<codeline lineno="104" refid="class_phase_1a4e02e24b93436561d9a2e32cd680902a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a4e02e24b93436561d9a2e32cd680902a" kindref="member">Jacobi</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="105" refid="class_phase_1a07e1a60b0f1437cfc1c542a855e2ae78" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a07e1a60b0f1437cfc1c542a855e2ae78" kindref="member">Accuracy</ref>(<ref refid="class_phase" kindref="compound">Phase</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="106" refid="class_phase_1a61987fd75352d46b441519267337067b" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_phase_1a61987fd75352d46b441519267337067b" kindref="member">Angular_Momentum</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_phase_1aad2f2a73f6db7e2f17c75333060aa169" kindref="member">m</ref>*<ref refid="class_phase_1ac2eafa4f03d8c16a4aca44f74b4a967d" kindref="member">x</ref>.cross(<ref refid="class_phase_1a745744b59a090275d5876ff3fd0216f6" kindref="member">v</ref>);}</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>numerical<sp/>integration</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="112" refid="class_phase_1a3b7cb7864e592a0871a4e03f7141befd" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/><ref refid="class_phase_1a3b7cb7864e592a0871a4e03f7141befd" kindref="member">integrate_to</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="113" refid="class_phase_1a7de31f53ec58e38d5fd60318be0d7421" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/><ref refid="class_phase_1a7de31f53ec58e38d5fd60318be0d7421" kindref="member">advance</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;);</highlight></codeline>
-<codeline lineno="114" refid="class_phase_1ab4d5d4c4dda4fc0a1b91805f17ae55a8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/><ref refid="class_phase_1ab4d5d4c4dda4fc0a1b91805f17ae55a8" kindref="member">x_return_map</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>symplectic<sp/>mapping</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="118" refid="class_phase_1a616e8cbbf85642f5177dca30388850e9" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/><ref refid="class_phase_1a616e8cbbf85642f5177dca30388850e9" kindref="member">integrate_to_symplectic</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="119" refid="class_phase_1abe6c67462c9d1a6545bf5d4bb506ff75" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/><ref refid="class_phase_1abe6c67462c9d1a6545bf5d4bb506ff75" kindref="member">advance_symplectic</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;);</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>predictor-corrector<sp/>stuff</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="123" refid="class_phase_1aeebf4ad023f48e5a2266ab55a7bcd88a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1aeebf4ad023f48e5a2266ab55a7bcd88a" kindref="member">set_PC</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="124" refid="class_phase_1a77c5847003665f35e7fc374daa1b387c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/><ref refid="class_phase_1a77c5847003665f35e7fc374daa1b387c" kindref="member">PC_advance</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="127" refid="class_phase_1a2689e2206334cae3c0607140059401cf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a2689e2206334cae3c0607140059401cf" kindref="member">binread</ref>(std::istream&amp;<sp/>fp);</highlight></codeline>
-<codeline lineno="128" refid="class_phase_1a4f40db300f955ada3d5323de08fa153f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_phase_1a4f40db300f955ada3d5323de08fa153f" kindref="member">binwrite</ref>(std::ostream&amp;<sp/>fp);</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="130" refid="class_phase_1a1e124ae038533aedea048a8ccf3c4356" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_ensemble" kindref="compound">Ensemble</ref>;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"></highlight></codeline>
-<codeline lineno="133"><highlight class="normal"></highlight></codeline>
-<codeline lineno="134" refid="phase_8_h_1aed9e4578035030ee3f253ac13ae80dee" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1aed9e4578035030ee3f253ac13ae80dee" kindref="member">Newton</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::VectorXd&amp;,<sp/>Eigen::VectorXd&amp;);</highlight></codeline>
-<codeline lineno="135" refid="phase_8_h_1aa7e32e3c67df0b9093a055eccd20062a" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1aa7e32e3c67df0b9093a055eccd20062a" kindref="member">v_circ</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="136" refid="phase_8_h_1a7a47c6bd8133e3b423cca596337e31de" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1a7a47c6bd8133e3b423cca596337e31de" kindref="member">vertical_kappa</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="137" refid="phase_8_h_1af915d907d2645c8177ca72add6eaf382" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1af915d907d2645c8177ca72add6eaf382" kindref="member">epicyclic_kappa</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="138" refid="phase_8_h_1a0c9d268d5ed44daa11f4fb509da934d5" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1a0c9d268d5ed44daa11f4fb509da934d5" kindref="member">Oort_A</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="139" refid="phase_8_h_1a3377e87f757fd0a9b2eedfa000b28db0" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1a3377e87f757fd0a9b2eedfa000b28db0" kindref="member">Oort_B</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"></highlight></codeline>
-<codeline lineno="141" refid="class_frame___rotation" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_frame___rotation" kindref="compound">Frame_Rotation</ref></highlight></codeline>
-<codeline lineno="142"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="144" refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref>,<sp/><ref refid="class_frame___rotation_1abe18c148f6ccf93c3cb445c9dddf52c3" kindref="member">omegasq</ref>,<sp/><ref refid="class_frame___rotation_1ad087ca1d64a29ae4dc07f2a8e66c864c" kindref="member">omega2</ref>;</highlight></codeline>
-<codeline lineno="145" refid="class_frame___rotation_1ab047ecbd0f224aa40c9adc368506ff97" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_frame___rotation_1ab047ecbd0f224aa40c9adc368506ff97" kindref="member">set_omega</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>w)<sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref><sp/>=<sp/>w;</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_frame___rotation_1abe18c148f6ccf93c3cb445c9dddf52c3" kindref="member">omegasq</ref><sp/>=<sp/><ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref>*<ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref>;</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_frame___rotation_1ad087ca1d64a29ae4dc07f2a8e66c864c" kindref="member">omega2</ref><sp/>=<sp/>2.0*<ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref>;</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="151" refid="class_frame___rotation_1ade2f22db7a7fbf631603272e4504ef8c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_frame___rotation_1ade2f22db7a7fbf631603272e4504ef8c" kindref="member">set_corotation</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>rc)</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(rc<sp/>&lt;=<sp/>0.0)<sp/><ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref>=0.0;</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref><sp/>=<sp/><ref refid="phase_8_h_1aa7e32e3c67df0b9093a055eccd20062a" kindref="member">v_circ</ref>(rc)/rc;</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_frame___rotation_1abe18c148f6ccf93c3cb445c9dddf52c3" kindref="member">omegasq</ref><sp/>=<sp/><ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref>*<ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref>;</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_frame___rotation_1ad087ca1d64a29ae4dc07f2a8e66c864c" kindref="member">omega2</ref><sp/>=<sp/>2.0*<ref refid="class_frame___rotation_1a7d3f9bf7e5db9743c40e3f96f6683af5" kindref="member">omega</ref>;</highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="158"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160"><highlight class="normal"></highlight></codeline>
-<codeline lineno="161" refid="phase_8_h_1aa1b475fba2aeb3e51b4282041ae4c9d4" refkind="member"><highlight class="normal">Eigen::Matrix3d<sp/><ref refid="phase_8_h_1aa1b475fba2aeb3e51b4282041ae4c9d4" kindref="member">z_Rotation</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="162" refid="phase_8_h_1a836f1515043416409e8e3c93004e4eee" refkind="member"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/>int<sp/>(*<ref refid="phase_8_h_1a836f1515043416409e8e3c93004e4eee" kindref="member">freezing_function</ref>)(<ref refid="class_phase" kindref="compound">Phase</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"></highlight></codeline>
-<codeline lineno="164"><highlight class="normal"></highlight></codeline>
-<codeline lineno="165"><highlight class="normal"></highlight></codeline>
-<codeline lineno="166" refid="class_ensemble" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_ensemble" kindref="compound">Ensemble</ref></highlight></codeline>
-<codeline lineno="167"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="169" refid="class_ensemble_1ab2cff107122af54c3bf077e24a5ac439" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1ab2cff107122af54c3bf077e24a5ac439" kindref="member">Nstars</ref>;</highlight></codeline>
-<codeline lineno="170" refid="class_ensemble_1a054a3885c940a85bf84b4882b912f6bf" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;Phase&gt;<sp/><ref refid="class_ensemble_1a054a3885c940a85bf84b4882b912f6bf" kindref="member">stars</ref>;</highlight></codeline>
-<codeline lineno="171" refid="class_ensemble_1afdf4c0b679bcecb8c8894011d7a24965" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1afdf4c0b679bcecb8c8894011d7a24965" kindref="member">t</ref>;</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="173"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="174" refid="class_ensemble_1a1957b82d2fcd78c08c369eade9530255" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble_1a1957b82d2fcd78c08c369eade9530255" kindref="member">Ensemble</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="175" refid="class_ensemble_1a339195fc6dbe31b54df790990823f4d2" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble_1a339195fc6dbe31b54df790990823f4d2" kindref="member">~Ensemble</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="176" refid="class_ensemble_1a320caae5a5759056837075b1f736a421" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble_1a320caae5a5759056837075b1f736a421" kindref="member">Ensemble</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="177" refid="class_ensemble_1ae76f6d115e9880911938254aeac9cff6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble_1ae76f6d115e9880911938254aeac9cff6" kindref="member">Ensemble</ref>(<ref refid="class_ensemble" kindref="compound">Ensemble</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="179" refid="class_ensemble_1a7d7d941c51c32eb0345d2dfaf36de511" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a7d7d941c51c32eb0345d2dfaf36de511" kindref="member">setsize</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="180" refid="class_ensemble_1a7b35b9e0c486a19438c17a186ea5be76" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a7b35b9e0c486a19438c17a186ea5be76" kindref="member">get_Nstars</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/><sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1ab2cff107122af54c3bf077e24a5ac439" kindref="member">Nstars</ref>;}</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="182" refid="class_ensemble_1a4074fa53fc6c39a1f958f22e738173be" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble" kindref="compound">Ensemble</ref><sp/>&amp;<ref refid="class_ensemble_1a4074fa53fc6c39a1f958f22e738173be" kindref="member">operator=</ref>(<ref refid="class_ensemble" kindref="compound">Ensemble</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="184" refid="class_ensemble_1aae6b5951ff84512dc3b67ebe85a6a883" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_phase" kindref="compound">Phase</ref><sp/>&amp;<ref refid="class_ensemble_1aae6b5951ff84512dc3b67ebe85a6a883" kindref="member">operator[]</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="186" refid="class_ensemble_1a95860c73399ec6d4a6b33efea072b29e" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble" kindref="compound">Ensemble</ref><sp/><ref refid="class_ensemble_1a95860c73399ec6d4a6b33efea072b29e" kindref="member">integrate_to</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="187" refid="class_ensemble_1a838672e440bf016213430f49feed0ff6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble" kindref="compound">Ensemble</ref><sp/><ref refid="class_ensemble_1a838672e440bf016213430f49feed0ff6" kindref="member">Step_Positions</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="188" refid="class_ensemble_1a3cbbffe613998ad52fad41798b9820ec" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble" kindref="compound">Ensemble</ref><sp/><ref refid="class_ensemble_1a3cbbffe613998ad52fad41798b9820ec" kindref="member">Step_Velocities</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::Vector3d<sp/>*);</highlight></codeline>
-<codeline lineno="189" refid="class_ensemble_1ae11f204e360af638d73366e0aef72fa6" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_ensemble" kindref="compound">Ensemble</ref><sp/><ref refid="class_ensemble_1ae11f204e360af638d73366e0aef72fa6" kindref="member">integrate_to</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/><ref refid="phase_8_h_1a836f1515043416409e8e3c93004e4eee" kindref="member">freezing_function</ref>);</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="191" refid="class_ensemble_1a4d49e2d8da60ffeb553c702425fabeb2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a4d49e2d8da60ffeb553c702425fabeb2" kindref="member">write_log</ref>(std::ostream&amp;);</highlight></codeline>
-<codeline lineno="192" refid="class_ensemble_1a1b8e95fec3446b2e7bd9daa64d7233aa" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a1b8e95fec3446b2e7bd9daa64d7233aa" kindref="member">write_snapshot</ref>(std::ostream&amp;);</highlight></codeline>
-<codeline lineno="193" refid="class_ensemble_1a4d97a9b6a73158f323d548389babb9e0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a4d97a9b6a73158f323d548389babb9e0" kindref="member">read_snapshot</ref>(std::istream&amp;);</highlight></codeline>
-<codeline lineno="194" refid="class_ensemble_1ac18ace89c8c26b0859272045af88a051" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1ac18ace89c8c26b0859272045af88a051" kindref="member">read_tidesfile</ref>(std::istream&amp;);</highlight></codeline>
-<codeline lineno="195" refid="class_ensemble_1a450e2ae54b53ce47cec5b04aecb66c8d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a450e2ae54b53ce47cec5b04aecb66c8d" kindref="member">write_orbits</ref>(std::ostream&amp;);</highlight></codeline>
-<codeline lineno="196" refid="class_ensemble_1a98057a4e4a14492bdaa912f6acc1b3e1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a98057a4e4a14492bdaa912f6acc1b3e1" kindref="member">read_orbits</ref>(std::istream&amp;);</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="198" refid="class_ensemble_1a0bbf0fce13054f1e03d08ee6dfb7e1ec" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a0bbf0fce13054f1e03d08ee6dfb7e1ec" kindref="member">settime</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="199" refid="class_ensemble_1a824f8c894e315dcea8b318e08cad4558" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a824f8c894e315dcea8b318e08cad4558" kindref="member">set_masses</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="200" refid="class_ensemble_1a7b0a5e6c266f6f0be91e297ddd7e81af" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a7b0a5e6c266f6f0be91e297ddd7e81af" kindref="member">scale_masses</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="201" refid="class_ensemble_1a9ce7efbdd930a759910a48c0fbd67424" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a9ce7efbdd930a759910a48c0fbd67424" kindref="member">scale_positions</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="202" refid="class_ensemble_1a403728f120c5482a4a6b75c567a26c4c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a403728f120c5482a4a6b75c567a26c4c" kindref="member">scale_speeds</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="203" refid="class_ensemble_1af7862feeb5f7297a10867641047a5cb6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1af7862feeb5f7297a10867641047a5cb6" kindref="member">rotate_frame</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="204" refid="class_ensemble_1a43e1ae21cb2b9da5ea5fdce2f93e991c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a43e1ae21cb2b9da5ea5fdce2f93e991c" kindref="member">rotate_view</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="206" refid="class_ensemble_1ac041507ec5f4cbdbcd9cee78725c1f28" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1ac041507ec5f4cbdbcd9cee78725c1f28" kindref="member">translate</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="208" refid="class_ensemble_1a4bb5b98c80803aceca0200c72d60bc75" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a4bb5b98c80803aceca0200c72d60bc75" kindref="member">total_Energy</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="209" refid="class_ensemble_1a79d3035f340091883d5dc9468c497af5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a79d3035f340091883d5dc9468c497af5" kindref="member">total_Kinetic</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="210" refid="class_ensemble_1ad7b0de55539173b72a20baabe7ba7f7f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1ad7b0de55539173b72a20baabe7ba7f7f" kindref="member">total_Potential</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="211" refid="class_ensemble_1ae39d07aa5db5fe9ccffa1ad490191d6c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1ae39d07aa5db5fe9ccffa1ad490191d6c" kindref="member">Virial</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="212" refid="class_ensemble_1afe721b57b1a0546fe0a9a0346270e84e" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_ensemble_1afe721b57b1a0546fe0a9a0346270e84e" kindref="member">CM_Position</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="213" refid="class_ensemble_1a55a3a41f14ff5ccd7be9159faf7329f1" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_ensemble_1a55a3a41f14ff5ccd7be9159faf7329f1" kindref="member">CM_Velocity</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="214" refid="class_ensemble_1a720f0f403273edac165123ef25bc6e47" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_ensemble_1a720f0f403273edac165123ef25bc6e47" kindref="member">total_Angular_Momentum</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="216" refid="class_ensemble_1ab62200ac32b470fa921f76507871468b" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Matrix3d<sp/><ref refid="class_ensemble_1ab62200ac32b470fa921f76507871468b" kindref="member">Moment_Tensor</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="217" refid="class_ensemble_1af69e6bbb969bf14b21b2bd7dc74a4413" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Matrix3d<sp/><ref refid="class_ensemble_1af69e6bbb969bf14b21b2bd7dc74a4413" kindref="member">Inertia_Tensor</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="218" refid="class_ensemble_1aa290aad546624c70636a8de07b2f2313" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_ensemble_1aa290aad546624c70636a8de07b2f2313" kindref="member">Principal_Axes</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/>Eigen::Matrix3d<sp/>&amp;);</highlight></codeline>
-<codeline lineno="219" refid="class_ensemble_1a670dad60618ab026dd30e02071062459" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_ensemble_1a670dad60618ab026dd30e02071062459" kindref="member">Solid_Body_Frequency</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="221" refid="class_ensemble_1a6ad9ad6b98edb565aa537b72eb7086d9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1a6ad9ad6b98edb565aa537b72eb7086d9" kindref="member">binread</ref>(std::istream&amp;<sp/>fp);</highlight></codeline>
-<codeline lineno="222" refid="class_ensemble_1aefb15975bc6530c6ef33e305626fbd38" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_ensemble_1aefb15975bc6530c6ef33e305626fbd38" kindref="member">binwrite</ref>(std::ostream&amp;<sp/>fp);</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="224"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"></highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227" refid="phase_8_h_1a456f1226446218a175a6762c82951359" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1a456f1226446218a175a6762c82951359" kindref="member">inverse_interp_zero</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>);</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"></highlight></codeline>
-<codeline lineno="230" refid="phase_8_h_1a81b58cc2788dff5c1255bec126c42381" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="phase_8_h_1a81b58cc2788dff5c1255bec126c42381" kindref="member">forward_interp</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal">&amp;);</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/phase.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/plummer_8_h.xml b/doxyxml/plummer_8_h.xml
deleted file mode 100644
index d45f611..0000000
--- a/doxyxml/plummer_8_h.xml
+++ /dev/null
@@ -1,242 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="plummer_8_h" kind="file" language="C++">
-    <compoundname>plummer.H</compoundname>
-    <includes local="no">cmath</includes>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
-      <node id="21">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="10">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="21" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="15">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="8">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-      </node>
-      <node id="13">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/plummer.H</label>
-        <link refid="plummer_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="2">
-        <label>cmath</label>
-      </node>
-      <node id="19">
-        <label>cstdlib</label>
-      </node>
-      <node id="9">
-        <label>deque</label>
-      </node>
-      <node id="14">
-        <label>functional</label>
-      </node>
-      <node id="17">
-        <label>iomanip</label>
-      </node>
-      <node id="16">
-        <label>iostream</label>
-      </node>
-      <node id="11">
-        <label>map</label>
-      </node>
-      <node id="5">
-        <label>memory</label>
-      </node>
-      <node id="6">
-        <label>random</label>
-      </node>
-      <node id="18">
-        <label>sstream</label>
-      </node>
-      <node id="12">
-        <label>string</label>
-      </node>
-      <node id="4">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_plummer_sphere" prot="public">PlummerSphere</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_plummer_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_plummer_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;cmath&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7" refid="class_plummer_sphere" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_plummer_sphere" kindref="compound">PlummerSphere</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="8"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight></codeline>
-<codeline lineno="11" refid="class_plummer_sphere_1a2ed8bffa65a69ebf759c447bf2e1a890" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a2ed8bffa65a69ebf759c447bf2e1a890" kindref="member">rmin</ref>;</highlight></codeline>
-<codeline lineno="12" refid="class_plummer_sphere_1ac439a9772d9462d5165aade1d5dc2876" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1ac439a9772d9462d5165aade1d5dc2876" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="13" refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>;</highlight></codeline>
-<codeline lineno="14" refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="class_plummer_sphere_1a9b12f5b54d3eb5cb0b043de2f9e50c59" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a9b12f5b54d3eb5cb0b043de2f9e50c59" kindref="member">dfac</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_plummer_sphere_1aeb86e917c5befaf750bfe1456abc5a06" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1aeb86e917c5befaf750bfe1456abc5a06" kindref="member">ffac</ref>;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="class_plummer_sphere_1a86bcc229834769dcc528c4e8a104ab41" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_plummer_sphere_1a86bcc229834769dcc528c4e8a104ab41" kindref="member">PlummerSphere</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RSCL<sp/>=<sp/>1.0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMIN<sp/>=<sp/>1.0e-6,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX<sp/>=<sp/>1.0e6,</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>MASS<sp/>=<sp/>1.0)</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref><sp/>=<sp/>RSCL;<sp/><ref refid="class_plummer_sphere_1a2ed8bffa65a69ebf759c447bf2e1a890" kindref="member">rmin</ref><sp/>=<sp/>RMIN;<sp/><ref refid="class_plummer_sphere_1ac439a9772d9462d5165aade1d5dc2876" kindref="member">rmax</ref><sp/>=<sp/>RMAX;<sp/><ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref><sp/>=<sp/>MASS;</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;PlummerSphere&quot;</highlight><highlight class="normal">;<sp/></highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/>=<sp/>3;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_sphere_1a9b12f5b54d3eb5cb0b043de2f9e50c59" kindref="member">dfac</ref><sp/>=<sp/>3.0*<ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>/(4.0*M_PI);</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_plummer_sphere_1aeb86e917c5befaf750bfe1456abc5a06" kindref="member">ffac</ref><sp/>=<sp/>128.0/7.0<sp/>/<sp/>(sqrt(8.0)*M_PI*M_PI)<sp/>*<sp/>3.0*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>/</highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>(<sp/>4.0*M_PI*pow(<ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref>,<sp/>4.0)<sp/>);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_plummer_sphere_1ad7aede352bfadd171d221cf16062f16a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1ad7aede352bfadd171d221cf16062f16a" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>q<sp/>=<sp/>r/<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref>*q*q*q/pow(1<sp/>+<sp/>q*q,<sp/>1.5);</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight></codeline>
-<codeline lineno="41" refid="class_plummer_sphere_1a1adbb81a75a56d8775991c72a06c7b8e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a1adbb81a75a56d8775991c72a06c7b8e" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a9b12f5b54d3eb5cb0b043de2f9e50c59" kindref="member">dfac</ref><sp/>*<sp/>pow(<sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref><sp/>+<sp/>r*r,<sp/>-2.5<sp/>);</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_plummer_sphere_1ab521401ab6440b28433f149867563de8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1ab521401ab6440b28433f149867563de8" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref><sp/>/<sp/>sqrt(<sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref><sp/>+<sp/>r*r<sp/>);<sp/></highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"></highlight></codeline>
-<codeline lineno="49" refid="class_plummer_sphere_1a2284b215f5c25868c28e6dee159d9791" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a2284b215f5c25868c28e6dee159d9791" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref>*r<sp/>*<sp/>pow(<sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref><sp/>+<sp/>r*r,<sp/>-1.5<sp/>);</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_plummer_sphere_1a603d8d644951e5868f76a0e4cdac8faf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a603d8d644951e5868f76a0e4cdac8faf" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref><sp/>*<sp/><sp/>pow(<sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref><sp/>+<sp/>r*r,<sp/>-2.5<sp/>)<sp/>*<sp/>(<sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref><sp/>-<sp/>2.0*r*r<sp/>);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="57" refid="class_plummer_sphere_1afb71240a34ad55b8d419a36ab5a881b8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1afb71240a34ad55b8d419a36ab5a881b8" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/>{</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/>ur<sp/>=<sp/>-<ref refid="class_plummer_sphere_1a66c8824f973b22749ab2aee621206564" kindref="member">mass</ref><sp/>/<sp/>sqrt(<sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref><sp/>+<sp/>r*r<sp/>);<sp/></highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/>dur<sp/>=<sp/>-ur<sp/>*<sp/>r<sp/>/<sp/>(<sp/><ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref>*<ref refid="class_plummer_sphere_1a05a2671858379c86776a2fc510b650bc" kindref="member">rscl</ref><sp/>+<sp/>r*r<sp/>);</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_plummer_sphere_1ade00f87203a81b6d3299638491ad470c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1ade00f87203a81b6d3299638491ad470c" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a2ed8bffa65a69ebf759c447bf2e1a890" kindref="member">rmin</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="65" refid="class_plummer_sphere_1aab24fa7d3d850ff0916bf8bcc5723dd1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1aab24fa7d3d850ff0916bf8bcc5723dd1" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1ac439a9772d9462d5165aade1d5dc2876" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_plummer_sphere_1a046542e5c6831717f9b5bcd1cb850906" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a046542e5c6831717f9b5bcd1cb850906" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1aeb86e917c5befaf750bfe1456abc5a06" kindref="member">ffac</ref><sp/>*<sp/>pow(-E,<sp/>3.5);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71" refid="class_plummer_sphere_1a5cce356c16602d5a7565829746eb4b3d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a5cce356c16602d5a7565829746eb4b3d" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-3.5*<ref refid="class_plummer_sphere_1aeb86e917c5befaf750bfe1456abc5a06" kindref="member">ffac</ref>*pow(-E,<sp/>2.5);</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight></codeline>
-<codeline lineno="75" refid="class_plummer_sphere_1a803e60961f740a9cf5acf605de13ef98" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1a803e60961f740a9cf5acf605de13ef98" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"></highlight></codeline>
-<codeline lineno="79" refid="class_plummer_sphere_1ab95198d90d07b124d3e42689bc861f43" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_plummer_sphere_1ab95198d90d07b124d3e42689bc861f43" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>3.5*2.5*<ref refid="class_plummer_sphere_1aeb86e917c5befaf750bfe1456abc5a06" kindref="member">ffac</ref>*pow(-E,<sp/>1.5);</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"></highlight></codeline>
-<codeline lineno="83"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"></highlight></codeline>
-<codeline lineno="85"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="86"><highlight class="normal"></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/plummer.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/poly_8_h.xml b/doxyxml/poly_8_h.xml
deleted file mode 100644
index eff0819..0000000
--- a/doxyxml/poly_8_h.xml
+++ /dev/null
@@ -1,156 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="poly_8_h" kind="file" language="C++">
-    <compoundname>poly.H</compoundname>
-    <includes local="no">iostream</includes>
-    <includes local="no">fstream</includes>
-    <includes local="no">Eigen/Eigen</includes>
-    <includedby refid="cpoly_8_h" local="yes">/home/weinberg/Projects/EXP/include/cpoly.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/poly.H</label>
-        <link refid="poly_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-      </node>
-      <node id="4">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="3">
-        <label>fstream</label>
-      </node>
-      <node id="2">
-        <label>iostream</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/cpoly.H</label>
-        <link refid="cpoly_8_h"/>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/poly.H</label>
-        <link refid="poly_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="class_poly" prot="public">Poly</innerclass>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="poly_8_h_1ac554319a478bce39df45772165cb0cab" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void bomb_Poly</definition>
-        <argsstring>(const char *)</argsstring>
-        <name>bomb_Poly</name>
-        <param>
-          <type>const char *</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/poly.H" line="68" column="6" declfile="/home/weinberg/Projects/EXP/include/poly.H" declline="68" declcolumn="6"/>
-      </memberdef>
-      <memberdef kind="function" id="poly_8_h_1a3919d2e7c387afb7eb2e8b99ba24cf14" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void bomb_Poly_operation</definition>
-        <argsstring>(const char *)</argsstring>
-        <name>bomb_Poly_operation</name>
-        <param>
-          <type>const char *</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/poly.H" line="67" column="6" declfile="/home/weinberg/Projects/EXP/include/poly.H" declline="67" declcolumn="6"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_poly_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_poly_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">using<sp/>namespace<sp/></highlight><highlight class="normal">std;</highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;iostream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;fstream&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;Eigen/Eigen&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10" refid="class_poly" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_poly" kindref="compound">Poly</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>Eigen::VectorXd</highlight></codeline>
-<codeline lineno="11"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight></codeline>
-<codeline lineno="15" refid="class_poly_1a20d36d5470f8ee069b547dbe2f98ba4d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_poly_1a20d36d5470f8ee069b547dbe2f98ba4d" kindref="member">order</ref>;</highlight></codeline>
-<codeline lineno="16" refid="class_poly_1ac92157cc1d9266b044c50ebcb31cfa16" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_poly_1ac92157cc1d9266b044c50ebcb31cfa16" kindref="member">reduce_order</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>constructors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="22" refid="class_poly_1ac5bc73ac5ba545903bd49037d46f8e46" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly_1ac5bc73ac5ba545903bd49037d46f8e46" kindref="member">Poly</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="23" refid="class_poly_1a7a346680adff050d4876f9e979cb6f69" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly_1a7a346680adff050d4876f9e979cb6f69" kindref="member">Poly</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="24" refid="class_poly_1aaa10c350b28b8d591ae1f6b1767facc5" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly_1aaa10c350b28b8d591ae1f6b1767facc5" kindref="member">Poly</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="25" refid="class_poly_1aeeddb5ac09f86b0336d37a7dd804684a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly_1aeeddb5ac09f86b0336d37a7dd804684a" kindref="member">Poly</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd<sp/>&amp;);</highlight></codeline>
-<codeline lineno="26" refid="class_poly_1a21eaebe124e306ff9463514a06e8344a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly_1a21eaebe124e306ff9463514a06e8344a" kindref="member">Poly</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>the<sp/>destructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="31" refid="class_poly_1a015f72021d46e817978f5e604baca627" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly_1a015f72021d46e817978f5e604baca627" kindref="member">~Poly</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>access<sp/>to<sp/>privates</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="class_poly_1ae84bf46b28bbc9c117881ae731c69c9a" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;<ref refid="class_poly_1ae84bf46b28bbc9c117881ae731c69c9a" kindref="member">operator=</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="36" refid="class_poly_1ac6d1975152b5060a30b666cbc5572218" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_poly_1ac6d1975152b5060a30b666cbc5572218" kindref="member">getorder</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_poly_1a20d36d5470f8ee069b547dbe2f98ba4d" kindref="member">order</ref>;}</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>unary<sp/>plus<sp/>and<sp/>minus</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_poly_1a258f36320c18281ddb1f9fbee475b0c4" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/><ref refid="class_poly_1a258f36320c18281ddb1f9fbee475b0c4" kindref="member">operator+</ref>()<sp/>{</highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>*</highlight><highlight class="keyword">this</highlight><highlight class="normal">;}</highlight></codeline>
-<codeline lineno="41" refid="class_poly_1ac3524d7bdfb545d09223c77c4d24c601" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/><ref refid="class_poly_1ac3524d7bdfb545d09223c77c4d24c601" kindref="member">operator-</ref>();</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"></highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Vector<sp/>addition<sp/>and<sp/>subtraction</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="45" refid="class_poly_1a2bdee5f33df9d09d9f01fe9ce0990e5c" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;<ref refid="class_poly_1a2bdee5f33df9d09d9f01fe9ce0990e5c" kindref="member">operator+=</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="46" refid="class_poly_1aa332a0937e1ce00bf8a5fa959a4b75e1" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/><ref refid="class_poly_1aa332a0937e1ce00bf8a5fa959a4b75e1" kindref="member">operator+</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;,<sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_poly_1a7ed831ab0f17f3b706467ab979207e10" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;<ref refid="class_poly_1a7ed831ab0f17f3b706467ab979207e10" kindref="member">operator-=</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="49" refid="class_poly_1a47bc94dfbe428a268419eb58acce2575" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/><ref refid="class_poly_1a47bc94dfbe428a268419eb58acce2575" kindref="member">operator-</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;,<sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"></highlight></codeline>
-<codeline lineno="51" refid="class_poly_1a41e2354b071745f8d51038e6bd7a7839" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;<ref refid="class_poly_1a41e2354b071745f8d51038e6bd7a7839" kindref="member">operator&amp;=</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">/*<sp/>Cauchy<sp/>product<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52" refid="class_poly_1a3bb71767b263b312d5350908dcecf040" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/><ref refid="class_poly_1a3bb71767b263b312d5350908dcecf040" kindref="member">operator&amp;</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;,<sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="53"><highlight class="normal"></highlight></codeline>
-<codeline lineno="54" refid="class_poly_1a258f68882745060dc9be6ba7381fc8ac" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;<ref refid="class_poly_1a258f68882745060dc9be6ba7381fc8ac" kindref="member">operator%=</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);<sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">/*<sp/>Synthetic<sp/>division<sp/>for<sp/>power<sp/>series<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="55" refid="class_poly_1a6f2e3c9680db13a30326dd08b79d665d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/><ref refid="class_poly_1a6f2e3c9680db13a30326dd08b79d665d" kindref="member">operator%</ref>(<ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;,<sp/><ref refid="class_poly" kindref="compound">Poly</ref><sp/>&amp;);</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Evaluate<sp/>polynomial</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="59" refid="class_poly_1a74886f241e211f5af127c087efc99d7f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_poly_1a74886f241e211f5af127c087efc99d7f" kindref="member">eval</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="60" refid="class_poly_1aec529e2b59d8b37f9737ecea5bf35bc2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_poly_1aec529e2b59d8b37f9737ecea5bf35bc2" kindref="member">deriv</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z);</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">/*<sp/>IO<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_poly_1ad9c1826d2cdc6c74f511fbd70441d56a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_poly_1ad9c1826d2cdc6c74f511fbd70441d56a" kindref="member">print</ref>(ostream<sp/>&amp;);</highlight></codeline>
-<codeline lineno="65"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="poly_8_h_1a3919d2e7c387afb7eb2e8b99ba24cf14" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="poly_8_h_1a3919d2e7c387afb7eb2e8b99ba24cf14" kindref="member">bomb_Poly_operation</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="68" refid="poly_8_h_1ac554319a478bce39df45772165cb0cab" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="poly_8_h_1ac554319a478bce39df45772165cb0cab" kindref="member">bomb_Poly</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*);</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"></highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/poly.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/psp__io_8py.xml b/doxyxml/psp__io_8py.xml
deleted file mode 100644
index 8561f73..0000000
--- a/doxyxml/psp__io_8py.xml
+++ /dev/null
@@ -1,581 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="psp__io_8py" kind="file" language="Python">
-    <compoundname>psp_io.py</compoundname>
-    <innerclass refid="classpsp__io_1_1_input" prot="public">psp_io::Input</innerclass>
-    <innerclass refid="classpsp__io_1_1_o_u_t_input" prot="public">psp_io::OUTInput</innerclass>
-    <innerclass refid="classpsp__io_1_1_s_p_l_input" prot="public">psp_io::SPLInput</innerclass>
-    <innernamespace refid="namespacepsp__io">psp_io</innernamespace>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1" refid="namespacepsp__io" refkind="compound"><highlight class="stringliteral">&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="2"><highlight class="stringliteral">psp_io.py</highlight></codeline>
-<codeline lineno="3"><highlight class="stringliteral"><sp/><sp/><sp/>driver<sp/>for<sp/>input<sp/>classes<sp/>and<sp/>handling<sp/>particle<sp/>data<sp/>in<sp/>Python</highlight></codeline>
-<codeline lineno="4"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="5"><highlight class="stringliteral">MSP<sp/>25<sp/>Oct<sp/>2021<sp/>Overhauled<sp/>version</highlight></codeline>
-<codeline lineno="6"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="7"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="8"><highlight class="stringliteral">TODO</highlight></codeline>
-<codeline lineno="9"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="10"><highlight class="stringliteral">&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>numpy<sp/></highlight><highlight class="keyword">as</highlight><highlight class="normal"><sp/>np</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keywordflow">try</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>requires<sp/>yaml<sp/>support:<sp/>likely<sp/>needs<sp/>to<sp/>be<sp/>installed.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">import</highlight><highlight class="normal"><sp/>yaml</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"></highlight><highlight class="keywordflow">except</highlight><highlight class="normal"><sp/>ImportError:</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>ImportError(</highlight><highlight class="stringliteral">&quot;You<sp/>will<sp/>need<sp/>to<sp/>&apos;pip<sp/>install<sp/>pyyaml&apos;<sp/>to<sp/>use<sp/>this<sp/>reader.&quot;</highlight><highlight class="normal">)</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="classpsp__io_1_1_input" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpsp__io_1_1_input" kindref="compound">Input</ref>():</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Input<sp/>class<sp/>to<sp/>adaptively<sp/>handle<sp/>various<sp/>EXP<sp/>output<sp/>formats.</highlight></codeline>
-<codeline lineno="23"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="24"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>inputs</highlight></codeline>
-<codeline lineno="25"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>---------------</highlight></codeline>
-<codeline lineno="26"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>filename<sp/>:<sp/>str</highlight></codeline>
-<codeline lineno="27"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>input<sp/>filename<sp/>to<sp/>be<sp/>read</highlight></codeline>
-<codeline lineno="28"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>comp<sp/><sp/><sp/><sp/><sp/>:<sp/>str,<sp/>optional</highlight></codeline>
-<codeline lineno="29"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>name<sp/>of<sp/>the<sp/>component<sp/>for<sp/>which<sp/>to<sp/>extract<sp/>data.<sp/>If<sp/>None,<sp/>will<sp/>read<sp/>primary<sp/>header<sp/>and<sp/>exit.</highlight></codeline>
-<codeline lineno="30"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>legacy<sp/><sp/><sp/>:<sp/>bool,<sp/>default=True</highlight></codeline>
-<codeline lineno="31"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>True,<sp/>return<sp/>attributes<sp/>rather<sp/>than<sp/>a<sp/>dictionary<sp/>of<sp/>particle<sp/>data</highlight></codeline>
-<codeline lineno="32"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>verbose<sp/><sp/>:<sp/>int,<sp/>default<sp/>0</highlight></codeline>
-<codeline lineno="33"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verbosity<sp/>flag.</highlight></codeline>
-<codeline lineno="34"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="35"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>returns</highlight></codeline>
-<codeline lineno="36"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>---------------</highlight></codeline>
-<codeline lineno="37"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>self<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>Input<sp/>instance</highlight></codeline>
-<codeline lineno="38"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.header<sp/><sp/><sp/>:<sp/>dict,<sp/>all<sp/>header<sp/>values<sp/>pulled<sp/>from<sp/>the<sp/>file</highlight></codeline>
-<codeline lineno="39"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>.keys()<sp/>are<sp/>the<sp/>names<sp/>of<sp/>each<sp/>component</highlight></codeline>
-<codeline lineno="40"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>each<sp/>component<sp/>has<sp/>a<sp/>dictionary<sp/>of<sp/>values,<sp/>including<sp/>&apos;parameters&apos;</highlight></codeline>
-<codeline lineno="41"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>details<sp/>of<sp/>the<sp/>force<sp/>calculation<sp/>are<sp/>in<sp/>&apos;force&apos;</highlight></codeline>
-<codeline lineno="42"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.filename<sp/>:<sp/>str,<sp/>the<sp/>filename<sp/>that<sp/>was<sp/>read</highlight></codeline>
-<codeline lineno="43"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.comp<sp/><sp/><sp/><sp/><sp/>:<sp/>str,<sp/>name<sp/>of<sp/>the<sp/>component</highlight></codeline>
-<codeline lineno="44"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.time<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>time<sp/>in<sp/>the<sp/>output<sp/>file</highlight></codeline>
-<codeline lineno="45"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.data<sp/><sp/><sp/><sp/><sp/>:<sp/>dictionary,<sp/>with<sp/>keys:</highlight></codeline>
-<codeline lineno="46"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>x<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>x<sp/>position</highlight></codeline>
-<codeline lineno="47"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>y<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>y<sp/>position</highlight></codeline>
-<codeline lineno="48"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>z<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>z<sp/>position</highlight></codeline>
-<codeline lineno="49"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vx<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>x<sp/>velocity</highlight></codeline>
-<codeline lineno="50"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vy<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>y<sp/>velocity</highlight></codeline>
-<codeline lineno="51"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vz<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>z<sp/>velocity</highlight></codeline>
-<codeline lineno="52"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mass<sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>mass<sp/>of<sp/>the<sp/>particle</highlight></codeline>
-<codeline lineno="53"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>index<sp/><sp/><sp/>:<sp/>int,<sp/>the<sp/>integer<sp/>index<sp/>of<sp/>the<sp/>particle</highlight></codeline>
-<codeline lineno="54"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>potE<sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>potential<sp/>energy<sp/>value</highlight></codeline>
-<codeline lineno="55"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="56"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>---or,<sp/>if<sp/>legacy=True---</highlight></codeline>
-<codeline lineno="57"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="58"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.xpos<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>x<sp/>position</highlight></codeline>
-<codeline lineno="59"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.ypos<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>y<sp/>position</highlight></codeline>
-<codeline lineno="60"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.zpos<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>z<sp/>position</highlight></codeline>
-<codeline lineno="61"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.xvel<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>x<sp/>velocity</highlight></codeline>
-<codeline lineno="62"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.yvel<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>y<sp/>velocity</highlight></codeline>
-<codeline lineno="63"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.zvel<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>z<sp/>velocity</highlight></codeline>
-<codeline lineno="64"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.mass<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>mass<sp/>of<sp/>the<sp/>particle</highlight></codeline>
-<codeline lineno="65"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.indx<sp/><sp/><sp/><sp/><sp/>:<sp/>int,<sp/>the<sp/>integer<sp/>index<sp/>of<sp/>the<sp/>particle</highlight></codeline>
-<codeline lineno="66"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.pote<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>potential<sp/>energy<sp/>value</highlight></codeline>
-<codeline lineno="67"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="68"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="69"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">__init__(self,<sp/>filename,comp=None,<sp/>legacy=True,verbose=0):</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;the<sp/>main<sp/>driver<sp/>for<sp/>the<sp/>class&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="73"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>auto-determine<sp/>the<sp/>file<sp/>type</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;SPL.&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>filename:</highlight></codeline>
-<codeline lineno="75" refid="classpsp__io_1_1_input_1a612daae817083b0d798bedeaacf3ebd8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a612daae817083b0d798bedeaacf3ebd8" kindref="member">style</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&apos;SPL&apos;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/></highlight><highlight class="stringliteral">&apos;OUT.&apos;</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordflow">in</highlight><highlight class="normal"><sp/>filename:</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a612daae817083b0d798bedeaacf3ebd8" kindref="member">style</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&apos;OUT&apos;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a612daae817083b0d798bedeaacf3ebd8" kindref="member">style</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&apos;unknown&apos;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>self.<ref refid="classpsp__io_1_1_input_1a612daae817083b0d798bedeaacf3ebd8" kindref="member">style</ref>==</highlight><highlight class="stringliteral">&apos;SPL&apos;</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>I<sp/>=<sp/><ref refid="classpsp__io_1_1_s_p_l_input" kindref="compound">SPLInput</ref>(filename,comp=comp,verbose=verbose)</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">elif</highlight><highlight class="normal"><sp/>self.<ref refid="classpsp__io_1_1_input_1a612daae817083b0d798bedeaacf3ebd8" kindref="member">style</ref>==</highlight><highlight class="stringliteral">&apos;OUT&apos;</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>I<sp/>=<sp/><ref refid="classpsp__io_1_1_o_u_t_input" kindref="compound">OUTInput</ref>(filename,comp=comp,verbose=verbose)</highlight></codeline>
-<codeline lineno="85"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="86"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">raise</highlight><highlight class="normal"><sp/>ValueError(</highlight><highlight class="stringliteral">&apos;File<sp/>type<sp/>not<sp/>supported<sp/>for<sp/>file<sp/>&quot;{}&quot;&apos;</highlight><highlight class="normal">.format(filename))</highlight></codeline>
-<codeline lineno="87"><highlight class="normal"></highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>expose<sp/>the<sp/>header</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="89" refid="classpsp__io_1_1_input_1a92880b322dca5cadce8b27e678f32090" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a92880b322dca5cadce8b27e678f32090" kindref="member">header</ref><sp/>=<sp/>I.header</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="92"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">#<sp/>what<sp/>is<sp/>the<sp/>ideal<sp/>legacy<sp/>error<sp/>handling?</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>I.comp==</highlight><highlight class="keywordtype">None</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>legacy:</highlight></codeline>
-<codeline lineno="97" refid="classpsp__io_1_1_input_1a09a9118df7e32dee11698de1015a3192" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a09a9118df7e32dee11698de1015a3192" kindref="member">mass</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;m&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="98" refid="classpsp__io_1_1_input_1a1c914cc2a57a27ac1fdd5c7b842daf5e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a1c914cc2a57a27ac1fdd5c7b842daf5e" kindref="member">xpos</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;x&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="99" refid="classpsp__io_1_1_input_1a7e53261206a3d544998a274d5b78d41d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a7e53261206a3d544998a274d5b78d41d" kindref="member">ypos</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;y&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="100" refid="classpsp__io_1_1_input_1ac75cc7a1765d0fe26164949569c58cda" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1ac75cc7a1765d0fe26164949569c58cda" kindref="member">zpos</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;z&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="101" refid="classpsp__io_1_1_input_1ac00d6108aae29ed82c65e0ae799d770d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1ac00d6108aae29ed82c65e0ae799d770d" kindref="member">xvel</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;vx&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="102" refid="classpsp__io_1_1_input_1afa010d016b3517b00e1199d7da61030d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1afa010d016b3517b00e1199d7da61030d" kindref="member">yvel</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;vy&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="103" refid="classpsp__io_1_1_input_1a8dfca1f617b48d810c28a3db9e73d479" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a8dfca1f617b48d810c28a3db9e73d479" kindref="member">zvel</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;vz&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="104" refid="classpsp__io_1_1_input_1a16200776daffd3ae62574fd194b251c0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a16200776daffd3ae62574fd194b251c0" kindref="member">pote</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;potE&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="106"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(I.header[I.comp][</highlight><highlight class="stringliteral">&apos;parameters&apos;</highlight><highlight class="normal">][</highlight><highlight class="stringliteral">&apos;indexing&apos;</highlight><highlight class="normal">]):</highlight></codeline>
-<codeline lineno="107" refid="classpsp__io_1_1_input_1a405a7236f68afcc6ba61298be4f31649" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a405a7236f68afcc6ba61298be4f31649" kindref="member">indx</ref><sp/>=<sp/>I.data[</highlight><highlight class="stringliteral">&apos;index&apos;</highlight><highlight class="normal">]</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"></highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="110" refid="classpsp__io_1_1_input_1a8f4918d190f529cbeee19f967cafeaff" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a8f4918d190f529cbeee19f967cafeaff" kindref="member">data</ref><sp/>=<sp/>I.data</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"></highlight></codeline>
-<codeline lineno="112" refid="classpsp__io_1_1_input_1a143e2adc8f17ced297b8b288363c4e50" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a143e2adc8f17ced297b8b288363c4e50" kindref="member">filename</ref><sp/>=<sp/>I.filename</highlight></codeline>
-<codeline lineno="113" refid="classpsp__io_1_1_input_1ab7dfbd32a505ab6ac7748cf4ce03a437" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1ab7dfbd32a505ab6ac7748cf4ce03a437" kindref="member">comp</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>I.comp</highlight></codeline>
-<codeline lineno="114" refid="classpsp__io_1_1_input_1a7de120efbc4b559cd3f971594b4f140a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.<ref refid="classpsp__io_1_1_input_1a7de120efbc4b559cd3f971594b4f140a" kindref="member">time</ref><sp/><sp/><sp/><sp/><sp/>=<sp/>I.time</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119" refid="classpsp__io_1_1_o_u_t_input" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classpsp__io_1_1_o_u_t_input" kindref="compound">OUTInput</ref>:</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;Input<sp/>class<sp/>to<sp/>adaptively<sp/>handle<sp/>OUT.<sp/>format<sp/>specifically</highlight></codeline>
-<codeline lineno="121"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="122"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>inputs</highlight></codeline>
-<codeline lineno="123"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>---------------</highlight></codeline>
-<codeline lineno="124"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>filename<sp/>:<sp/>str</highlight></codeline>
-<codeline lineno="125"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>input<sp/>filename<sp/>to<sp/>be<sp/>read</highlight></codeline>
-<codeline lineno="126"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>comp<sp/><sp/><sp/><sp/><sp/>:<sp/>str,<sp/>optional</highlight></codeline>
-<codeline lineno="127"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>name<sp/>of<sp/>the<sp/>component<sp/>for<sp/>which<sp/>to<sp/>extract<sp/>data.<sp/>If<sp/>None,<sp/>will<sp/>read<sp/>primary<sp/>header<sp/>and<sp/>exit.</highlight></codeline>
-<codeline lineno="128"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>verbose<sp/><sp/>:<sp/>int,<sp/>default<sp/>0</highlight></codeline>
-<codeline lineno="129"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verbosity<sp/>flag.</highlight></codeline>
-<codeline lineno="130"><highlight class="stringliteral"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="131"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>returns</highlight></codeline>
-<codeline lineno="132"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>---------------</highlight></codeline>
-<codeline lineno="133"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>self<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>Input<sp/>instance</highlight></codeline>
-<codeline lineno="134"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.header<sp/><sp/><sp/>:<sp/>dict,<sp/>all<sp/>header<sp/>values<sp/>pulled<sp/>from<sp/>the<sp/>file</highlight></codeline>
-<codeline lineno="135"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>.keys()<sp/>are<sp/>the<sp/>names<sp/>of<sp/>each<sp/>component</highlight></codeline>
-<codeline lineno="136"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>each<sp/>component<sp/>has<sp/>a<sp/>dictionary<sp/>of<sp/>values,<sp/>including<sp/>&apos;parameters&apos;</highlight></codeline>
-<codeline lineno="137"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>details<sp/>of<sp/>the<sp/>force<sp/>calculation<sp/>are<sp/>in<sp/>&apos;force&apos;</highlight></codeline>
-<codeline lineno="138"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.filename<sp/>:<sp/>str,<sp/>the<sp/>filename<sp/>that<sp/>was<sp/>read</highlight></codeline>
-<codeline lineno="139"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.comp<sp/><sp/><sp/><sp/><sp/>:<sp/>str,<sp/>name<sp/>of<sp/>the<sp/>component</highlight></codeline>
-<codeline lineno="140"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.time<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>time<sp/>in<sp/>the<sp/>output<sp/>file</highlight></codeline>
-<codeline lineno="141"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/>.data<sp/><sp/><sp/><sp/><sp/>:<sp/>dictionary,<sp/>with<sp/>keys:</highlight></codeline>
-<codeline lineno="142"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>x<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>x<sp/>position</highlight></codeline>
-<codeline lineno="143"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>y<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>y<sp/>position</highlight></codeline>
-<codeline lineno="144"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>z<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>z<sp/>position</highlight></codeline>
-<codeline lineno="145"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vx<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>x<sp/>velocity</highlight></codeline>
-<codeline lineno="146"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vy<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>y<sp/>velocity</highlight></codeline>
-<codeline lineno="147"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vz<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>z<sp/>velocity</highlight></codeline>
-<codeline lineno="148"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mass<sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>mass<sp/>of<sp/>the<sp/>particle</highlight></codeline>
-<codeline lineno="149"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>index<sp/><sp/><sp/>:<sp/>int,<sp/>the<sp/>integer<sp/>index<sp/>of<sp/>the<sp/>particle</highlight></codeline>
-<codeline lineno="150"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>potE<sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>potential<sp/>energy<sp/>value</highlight></codeline>
-<codeline lineno="151"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="152"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>&quot;&quot;&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">def<sp/></highlight><highlight class="normal">__init__(self,<sp/>filename,comp=None,verbose=0):</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="stringliteral">&quot;&quot;&quot;the<sp/>main<sp/>driver&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="155" refid="classpsp__io_1_1_o_u_t_input_1aec8e695a2524f7e1e3f8e9fa0093ab2f" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.verbose<sp/><sp/>=<sp/>verbose<sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="156" refid="classpsp__io_1_1_o_u_t_input_1ae4cf0c2e1a54c37ada93f0de4bf4999c" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.filename<sp/>=<sp/>filename</highlight></codeline>
-<codeline lineno="157"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="158"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>initial<sp/>check<sp/>for<sp/>file<sp/>validity</highlight></codeline>
-<codeline lineno="159"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>try:</highlight></codeline>
-<codeline lineno="160" refid="classpsp__io_1_1_o_u_t_input_1a89347f30d47e1ad80ef8798b454dd86d" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f<sp/>=<sp/>open(self.filename,<sp/>&apos;rb&apos;)</highlight></codeline>
-<codeline lineno="161"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>except<sp/>Exception:</highlight></codeline>
-<codeline lineno="162"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>raise<sp/>IOError(&apos;Failed<sp/>to<sp/>open<sp/>&quot;{}&quot;&apos;.format(filename))</highlight></codeline>
-<codeline lineno="163"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="164"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>do<sp/>an<sp/>initial<sp/>read<sp/>of<sp/>the<sp/>header</highlight></codeline>
-<codeline lineno="165" refid="classpsp__io_1_1_o_u_t_input_1ad70e6ee27675b5583a1b601617ca4717" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.primary_header<sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="166"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="167"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>initialise<sp/>dictionaries</highlight></codeline>
-<codeline lineno="168" refid="classpsp__io_1_1_o_u_t_input_1ae8017596b1481871b779e679cd75b1b9" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.comp_map<sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="169" refid="classpsp__io_1_1_o_u_t_input_1aa9a627a1ad132a98dc9cc98c2a4ad466" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.header<sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="170"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="171"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._read_primary_header()</highlight></codeline>
-<codeline lineno="172"><highlight class="stringliteral"></highlight></codeline>
-<codeline lineno="173" refid="classpsp__io_1_1_o_u_t_input_1a4346b3f463ce615b2812ffd717cb01ff" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.comp<sp/>=<sp/>comp</highlight></codeline>
-<codeline lineno="174"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_comps<sp/>=<sp/>list(self.header.keys())</highlight></codeline>
-<codeline lineno="175"><highlight class="stringliteral"><sp/></highlight></codeline>
-<codeline lineno="176"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>if<sp/>a<sp/>component<sp/>is<sp/>defined,<sp/>retrieve<sp/>data</highlight></codeline>
-<codeline lineno="177"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>comp<sp/>!=<sp/>None:</highlight></codeline>
-<codeline lineno="178"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>comp<sp/>not<sp/>in<sp/>_comps:</highlight></codeline>
-<codeline lineno="179"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>raise<sp/>IOError(&apos;The<sp/>specified<sp/>component<sp/>does<sp/>not<sp/>exist.&apos;)</highlight></codeline>
-<codeline lineno="180"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="181"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>else:</highlight></codeline>
-<codeline lineno="182"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.comp<sp/>=<sp/>comp</highlight></codeline>
-<codeline lineno="183" refid="classpsp__io_1_1_o_u_t_input_1a1559e1818560efe1105b18907969b012" refkind="member"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.data<sp/>=<sp/>self._read_component_data(self.filename,</highlight></codeline>
-<codeline lineno="184"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.header[self.comp][&apos;nbodies&apos;],</highlight></codeline>
-<codeline lineno="185"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>int(self.header[self.comp][&apos;data_start&apos;]))</highlight></codeline>
-<codeline lineno="186"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>wrapup</highlight></codeline>
-<codeline lineno="187"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.close()</highlight></codeline>
-<codeline lineno="188"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="189"><highlight class="stringliteral"><sp/><sp/><sp/><sp/>def<sp/>_read_primary_header(self):</highlight></codeline>
-<codeline lineno="190"><highlight class="stringliteral"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;</highlight><highlight class="normal">read<sp/>the<sp/>primary<sp/>header<sp/>from<sp/>an<sp/>OUT.<sp/>file&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"></highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._check_magic_number()</highlight></codeline>
-<codeline lineno="193"><highlight class="normal"></highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>reset<sp/>to<sp/>beginning<sp/>and<sp/>read<sp/>current<sp/>time</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.seek(0)</highlight></codeline>
-<codeline lineno="196" refid="classpsp__io_1_1_o_u_t_input_1a95c0d00ca6862f66cb7abdf5e18f166a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.time,<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=&apos;&lt;f8&apos;,<sp/>count=1)</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._nbodies_tot,<sp/>self._ncomp<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.uint32,count=2)</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"></highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data_start<sp/>=<sp/>16</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>comp<sp/>in<sp/>range(0,self._ncomp):</highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.seek(data_start)</highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>next_comp<sp/>=<sp/>self._read_out_component_header()</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data_start<sp/>=<sp/>next_comp</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"></highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_summarise_primary_header(self):</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;a<sp/>short<sp/>summary<sp/>of<sp/>what<sp/>is<sp/>in<sp/>the<sp/>file&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"></highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ncomponents<sp/>=<sp/>len(self.header.keys())</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comp_list<sp/><sp/><sp/>=<sp/>list(self.header.keys())</highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(&quot;Found<sp/>{}<sp/>components.&quot;.format(ncomponents))</highlight></codeline>
-<codeline lineno="212"><highlight class="normal"></highlight></codeline>
-<codeline lineno="213"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>n<sp/>in<sp/>range(0,ncomponents):</highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(&quot;Component<sp/>{}:<sp/>{}&quot;.format(n,comp_list[n]))</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="216"><highlight class="normal"></highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_read_out_component_header(self):</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;read<sp/>in<sp/>the<sp/>header<sp/>for<sp/>a<sp/>single<sp/>component,<sp/>from<sp/>an<sp/>OUT.<sp/>file&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#_<sp/>=<sp/>f.tell()<sp/><sp/>#<sp/>byte<sp/>position<sp/>of<sp/>this<sp/>component</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"></highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>self._float_len<sp/>==<sp/>4:</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_1,_2,<sp/>nbodies,<sp/>nint_attr,<sp/>nfloat_attr,<sp/>infostringlen<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.uint32,<sp/>count=6)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="224"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>else:</highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>nbodies,<sp/>nint_attr,<sp/>nfloat_attr,<sp/>infostringlen<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.uint32,<sp/>count=4)</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>information<sp/>string<sp/>from<sp/>the<sp/>header</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.dtype((np.bytes_,<sp/>infostringlen)),count=1)</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_normal<sp/>=<sp/>head[0].decode()</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict<sp/>=<sp/>yaml.safe_load(head_normal)</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>deprecated<sp/>backward<sp/>compatibility<sp/>here:<sp/>see<sp/>frozen<sp/>versions<sp/>if<sp/>this<sp/>is<sp/>an<sp/>old<sp/>file</highlight></codeline>
-<codeline lineno="233"><highlight class="normal"></highlight></codeline>
-<codeline lineno="234"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comp_data_pos<sp/>=<sp/>self.f.tell()<sp/><sp/>#<sp/>byte<sp/>position<sp/>where<sp/>component<sp/>data<sp/>begins</highlight></codeline>
-<codeline lineno="235"><highlight class="normal"></highlight></codeline>
-<codeline lineno="236"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>the<sp/>default<sp/>fields<sp/>are<sp/>(m,<sp/>x,<sp/>y,<sp/>z,<sp/>vx,<sp/>vy,<sp/>vz,<sp/>p)</highlight></codeline>
-<codeline lineno="237"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>nfields<sp/>=<sp/>8</highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comp_length<sp/>=<sp/>nbodies<sp/>*<sp/>(8<sp/>*<sp/>int(head_dict[&apos;parameters&apos;][&apos;indexing&apos;])<sp/>+</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_len<sp/>*<sp/>nfields<sp/>+</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>4<sp/>*<sp/>nint_attr<sp/>+</highlight></codeline>
-<codeline lineno="241"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_len<sp/>*<sp/>nfloat_attr)</highlight></codeline>
-<codeline lineno="242"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comp_data_end<sp/>=<sp/>self.f.tell()<sp/>+<sp/>comp_length<sp/><sp/>#<sp/>byte<sp/>pos.<sp/>of<sp/>comp.<sp/>data<sp/>end</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="244"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict[&apos;nint_attr&apos;]<sp/><sp/><sp/>=<sp/>nint_attr</highlight></codeline>
-<codeline lineno="245"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict[&apos;nfloat_attr&apos;]<sp/>=<sp/>nfloat_attr</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict[&apos;nbodies&apos;]<sp/><sp/><sp/><sp/><sp/>=<sp/>nbodies</highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict[&apos;data_start&apos;]<sp/><sp/>=<sp/>comp_data_pos</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict[&apos;data_end&apos;]<sp/><sp/><sp/><sp/>=<sp/>comp_data_end</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"></highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.header[head_dict[&apos;name&apos;]]<sp/>=<sp/>head_dict</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"></highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>specifically<sp/>look<sp/>for<sp/>indexing</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>try:</highlight></codeline>
-<codeline lineno="254" refid="classpsp__io_1_1_o_u_t_input_1a85889d3b0d3d9518c4abeb480ba0feb1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.indexing<sp/>=<sp/>head_dict[&apos;parameters&apos;][&apos;indexing&apos;]</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>except:</highlight></codeline>
-<codeline lineno="256"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.indexing<sp/>=<sp/>head_dict[&apos;indexing&apos;]==&apos;true&apos;</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"></highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>return<sp/>comp_data_end</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_check_magic_number(self):</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;check<sp/>the<sp/>magic<sp/>number<sp/>to<sp/>see<sp/>if<sp/>a<sp/>file<sp/>is<sp/>float<sp/>or<sp/>double&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="263"><highlight class="normal"></highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.seek(16)<sp/><sp/>#<sp/>find<sp/>magic<sp/>number</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>cmagic,<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.uint32,<sp/>count=1)</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"></highlight></codeline>
-<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>check<sp/>if<sp/>it<sp/>is<sp/>float<sp/>vs.<sp/>double</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>cmagic<sp/>==<sp/>2915019716:</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_len<sp/>=<sp/>4</highlight></codeline>
-<codeline lineno="270"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_str<sp/>=<sp/>&apos;f&apos;</highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>else:</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_len<sp/>=<sp/>8</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_str<sp/>=<sp/>&apos;d&apos;</highlight></codeline>
-<codeline lineno="274"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="275"><highlight class="normal"></highlight></codeline>
-<codeline lineno="276"><highlight class="normal"></highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_read_component_data(self,filename,nbodies,offset):</highlight></codeline>
-<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;read<sp/>in<sp/>all<sp/>data<sp/>for<sp/>component&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"></highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>[]</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/>=<sp/>[]</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>self.header[self.comp][&apos;parameters&apos;][&apos;indexing&apos;]:</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>if<sp/>indexing<sp/>is<sp/>on,<sp/>the<sp/>0th<sp/>column<sp/>is<sp/>Long</highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>dtype_str<sp/>+<sp/>[&apos;l&apos;]</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/><sp/>=<sp/>colnames<sp/>+<sp/>[&apos;index&apos;]</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"></highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>dtype_str<sp/>+<sp/>[self._float_str]<sp/>*<sp/>8</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/>=<sp/>colnames<sp/>+<sp/>[&apos;m&apos;,<sp/>&apos;x&apos;,<sp/>&apos;y&apos;,<sp/>&apos;z&apos;,<sp/>&apos;vx&apos;,<sp/>&apos;vy&apos;,<sp/>&apos;vz&apos;,<sp/>&apos;potE&apos;]</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"></highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>dtype_str<sp/>+<sp/>[&apos;i&apos;]<sp/>*<sp/>self.header[self.comp][&apos;nint_attr&apos;]</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/>=<sp/>colnames<sp/>+<sp/>[&apos;i_attr{}&apos;.format(i)</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>i<sp/>in<sp/>range(self.header[self.comp][&apos;nint_attr&apos;])]</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"></highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>dtype_str<sp/>+<sp/>[self._float_str]<sp/>*<sp/>self.header[self.comp][&apos;nfloat_attr&apos;]</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/>=<sp/>colnames<sp/>+<sp/>[&apos;f_attr{}&apos;.format(i)</highlight></codeline>
-<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>i<sp/>in<sp/>range(self.header[self.comp][&apos;nfloat_attr&apos;])]</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"></highlight></codeline>
-<codeline lineno="298"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype<sp/>=<sp/>np.dtype(&apos;,&apos;.join(dtype_str))</highlight></codeline>
-<codeline lineno="299"><highlight class="normal"></highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>=<sp/>np.memmap(filename,</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype=dtype,</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>shape=(1,<sp/>nbodies),</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>offset=offset,</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>order=&apos;F&apos;,<sp/>mode=&apos;r&apos;)</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"></highlight></codeline>
-<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tbl<sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>i,<sp/>name<sp/>in<sp/>enumerate(colnames):</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tbl[name]<sp/>=<sp/>np.array(out[&apos;f{}&apos;.format(i)][0],<sp/>copy=True)</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"></highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>del<sp/>out<sp/><sp/>#<sp/>close<sp/>the<sp/>memmap<sp/>instance</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"></highlight></codeline>
-<codeline lineno="312"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>return<sp/>tbl</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"></highlight></codeline>
-<codeline lineno="314"><highlight class="normal"></highlight></codeline>
-<codeline lineno="315"><highlight class="normal"></highlight></codeline>
-<codeline lineno="316"><highlight class="normal"></highlight></codeline>
-<codeline lineno="317" refid="classpsp__io_1_1_s_p_l_input" refkind="compound"><highlight class="normal">class<sp/>SPLInput:</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;&quot;&quot;Input<sp/>class<sp/>to<sp/>adaptively<sp/>handle<sp/>SPL.<sp/>format<sp/>specifically</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"></highlight></codeline>
-<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/>inputs</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/>---------------</highlight></codeline>
-<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/>filename<sp/>:<sp/>str</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>input<sp/>filename<sp/>to<sp/>be<sp/>read</highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/><sp/><sp/>comp<sp/><sp/><sp/><sp/><sp/>:<sp/>str,<sp/>optional</highlight></codeline>
-<codeline lineno="325"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>name<sp/>of<sp/>the<sp/>component<sp/>for<sp/>which<sp/>to<sp/>extract<sp/>data.<sp/>If<sp/>None,<sp/>will<sp/>read<sp/>primary<sp/>header<sp/>and<sp/>exit.</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/>verbose<sp/><sp/>:<sp/>int,<sp/>default<sp/>0</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>verbosity<sp/>flag.</highlight></codeline>
-<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/>returns</highlight></codeline>
-<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/>---------------</highlight></codeline>
-<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/>self<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>Input<sp/>instance</highlight></codeline>
-<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>.header<sp/><sp/><sp/>:<sp/>dict,<sp/>all<sp/>header<sp/>values<sp/>pulled<sp/>from<sp/>the<sp/>file</highlight></codeline>
-<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>.keys()<sp/>are<sp/>the<sp/>names<sp/>of<sp/>each<sp/>component</highlight></codeline>
-<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>each<sp/>component<sp/>has<sp/>a<sp/>dictionary<sp/>of<sp/>values,<sp/>including<sp/>&apos;parameters&apos;</highlight></codeline>
-<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>the<sp/>details<sp/>of<sp/>the<sp/>force<sp/>calculation<sp/>are<sp/>in<sp/>&apos;force&apos;</highlight></codeline>
-<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>.filename<sp/>:<sp/>str,<sp/>the<sp/>filename<sp/>that<sp/>was<sp/>read</highlight></codeline>
-<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>.comp<sp/><sp/><sp/><sp/><sp/>:<sp/>str,<sp/>name<sp/>of<sp/>the<sp/>component</highlight></codeline>
-<codeline lineno="338"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>.time<sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>time<sp/>in<sp/>the<sp/>output<sp/>file</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>.data<sp/><sp/><sp/><sp/><sp/>:<sp/>dictionary,<sp/>with<sp/>keys:</highlight></codeline>
-<codeline lineno="340"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>x<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>x<sp/>position</highlight></codeline>
-<codeline lineno="341"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>y<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>y<sp/>position</highlight></codeline>
-<codeline lineno="342"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>z<sp/><sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>z<sp/>position</highlight></codeline>
-<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vx<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>x<sp/>velocity</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vy<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>y<sp/>velocity</highlight></codeline>
-<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>vz<sp/><sp/><sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>z<sp/>velocity</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>mass<sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>mass<sp/>of<sp/>the<sp/>particle</highlight></codeline>
-<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>index<sp/><sp/><sp/>:<sp/>int,<sp/>the<sp/>integer<sp/>index<sp/>of<sp/>the<sp/>particle</highlight></codeline>
-<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>potE<sp/><sp/><sp/><sp/>:<sp/>float,<sp/>the<sp/>potential<sp/>energy<sp/>value</highlight></codeline>
-<codeline lineno="349"><highlight class="normal"></highlight></codeline>
-<codeline lineno="350"><highlight class="normal"><sp/><sp/><sp/><sp/>&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="351"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>__init__(self,<sp/>filename,comp=None,verbose=0):</highlight></codeline>
-<codeline lineno="352"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;the<sp/>main<sp/>driver,<sp/>see<sp/>above<sp/>for<sp/>parameters&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="353" refid="classpsp__io_1_1_s_p_l_input_1aead07550f440b255cde9d6c8c56ad3f2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.verbose<sp/><sp/>=<sp/>verbose</highlight></codeline>
-<codeline lineno="354" refid="classpsp__io_1_1_s_p_l_input_1a11993c9be21a0d2caa3335f4adfebfe2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.filename<sp/>=<sp/>filename</highlight></codeline>
-<codeline lineno="355"><highlight class="normal"></highlight></codeline>
-<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>initial<sp/>check<sp/>for<sp/>file<sp/>validity</highlight></codeline>
-<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>try:</highlight></codeline>
-<codeline lineno="358" refid="classpsp__io_1_1_s_p_l_input_1ab4d284d7d7b42406164fc3f5159a16a3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f<sp/>=<sp/>open(self.filename,<sp/>&apos;rb&apos;)</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>except<sp/>Exception:</highlight></codeline>
-<codeline lineno="360"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>raise<sp/>IOError(&apos;Failed<sp/>to<sp/>open<sp/>&quot;{}&quot;&apos;.format(filename))</highlight></codeline>
-<codeline lineno="361"><highlight class="normal"></highlight></codeline>
-<codeline lineno="362"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>do<sp/>an<sp/>initial<sp/>read<sp/>of<sp/>the<sp/>header</highlight></codeline>
-<codeline lineno="363" refid="classpsp__io_1_1_s_p_l_input_1a1ae6ace7a044df1d843a7a61b6b03dc3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.primary_header<sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="364"><highlight class="normal"></highlight></codeline>
-<codeline lineno="365"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>initialise<sp/>dictionaries</highlight></codeline>
-<codeline lineno="366" refid="classpsp__io_1_1_s_p_l_input_1a233fb6f3eb7d55329cb551f0987f21c9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.component_map<sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="367" refid="classpsp__io_1_1_s_p_l_input_1ac2486bcfe3063f96fbbaa3d1efc6ac14" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.header<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="368"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="369"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._read_primary_header()</highlight></codeline>
-<codeline lineno="370"><highlight class="normal"></highlight></codeline>
-<codeline lineno="371" refid="classpsp__io_1_1_s_p_l_input_1ab284825eb23923bcbcfd0085aa419de7" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.comp<sp/>=<sp/>comp</highlight></codeline>
-<codeline lineno="372"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_comps<sp/>=<sp/>list(self.header.keys())</highlight></codeline>
-<codeline lineno="373"><highlight class="normal"></highlight></codeline>
-<codeline lineno="374"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>comp<sp/>==<sp/>None:</highlight></codeline>
-<codeline lineno="375"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._summarise_primary_header()</highlight></codeline>
-<codeline lineno="376"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>return</highlight></codeline>
-<codeline lineno="377"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="378"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>if<sp/>a<sp/>component<sp/>is<sp/>defined,<sp/>retrieve<sp/>data</highlight></codeline>
-<codeline lineno="379"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>comp<sp/>!=<sp/>None:</highlight></codeline>
-<codeline lineno="380"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>comp<sp/>not<sp/>in<sp/>_comps:</highlight></codeline>
-<codeline lineno="381"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>raise<sp/>IOError(&apos;The<sp/>specified<sp/>component<sp/>does<sp/>not<sp/>exist.&apos;)</highlight></codeline>
-<codeline lineno="382"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="383"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>else:</highlight></codeline>
-<codeline lineno="384"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.comp<sp/>=<sp/>comp</highlight></codeline>
-<codeline lineno="385"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="386"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>set<sp/>up<sp/>assuming<sp/>the<sp/>directory<sp/>of<sp/>the<sp/>main<sp/>file<sp/>is<sp/>the<sp/>same</highlight></codeline>
-<codeline lineno="387"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>as<sp/>the<sp/>subfiles.<sp/>could<sp/>add<sp/>verbose<sp/>flag<sp/>to<sp/>warn?</highlight></codeline>
-<codeline lineno="388" refid="classpsp__io_1_1_s_p_l_input_1a95f8948288d00d8f8e2df611ce1fe531" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.indir<sp/>=<sp/>filename.split(&apos;SPL&apos;)[0]</highlight></codeline>
-<codeline lineno="389"><highlight class="normal"></highlight></codeline>
-<codeline lineno="390"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>now<sp/>we<sp/>can<sp/>query<sp/>out<sp/>a<sp/>specific<sp/>component</highlight></codeline>
-<codeline lineno="391"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._make_spl_file_list(self.comp)</highlight></codeline>
-<codeline lineno="392"><highlight class="normal"></highlight></codeline>
-<codeline lineno="393"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>given<sp/>the<sp/>comp,<sp/>pull<sp/>the<sp/>data.</highlight></codeline>
-<codeline lineno="394"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._read_spl_component_data()</highlight></codeline>
-<codeline lineno="395"><highlight class="normal"></highlight></codeline>
-<codeline lineno="396"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>wrapup</highlight></codeline>
-<codeline lineno="397"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.close()</highlight></codeline>
-<codeline lineno="398"><highlight class="normal"></highlight></codeline>
-<codeline lineno="399"><highlight class="normal"></highlight></codeline>
-<codeline lineno="400"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_read_primary_header(self):</highlight></codeline>
-<codeline lineno="401"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;read<sp/>the<sp/>primary<sp/>header<sp/>from<sp/>an<sp/>SPL.<sp/>file&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="402"><highlight class="normal"></highlight></codeline>
-<codeline lineno="403"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._check_magic_number()</highlight></codeline>
-<codeline lineno="404"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="405"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.seek(0)</highlight></codeline>
-<codeline lineno="406" refid="classpsp__io_1_1_s_p_l_input_1a3975708e66f040ed3469c2d92cecc0a8" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.time,<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=&apos;&lt;f8&apos;,<sp/>count=1)</highlight></codeline>
-<codeline lineno="407"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._nbodies_tot,<sp/>self._ncomp<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.uint32,count=2)</highlight></codeline>
-<codeline lineno="408"><highlight class="normal"></highlight></codeline>
-<codeline lineno="409"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data_start<sp/>=<sp/>16<sp/>#<sp/>guaranteed<sp/>first<sp/>component<sp/>location...</highlight></codeline>
-<codeline lineno="410"><highlight class="normal"></highlight></codeline>
-<codeline lineno="411"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>now<sp/>read<sp/>the<sp/>component<sp/>headers</highlight></codeline>
-<codeline lineno="412"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>comp<sp/>in<sp/>range(0,self._ncomp):</highlight></codeline>
-<codeline lineno="413"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.seek(data_start)<sp/></highlight></codeline>
-<codeline lineno="414"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>next_comp<sp/>=<sp/>self._read_spl_component_header()<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="415"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data_start<sp/>=<sp/>next_comp<sp/></highlight></codeline>
-<codeline lineno="416"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="417"><highlight class="normal"></highlight></codeline>
-<codeline lineno="418"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_read_spl_component_header(self):</highlight></codeline>
-<codeline lineno="419"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;read<sp/>in<sp/>the<sp/>header<sp/>for<sp/>a<sp/>single<sp/>component,<sp/>from<sp/>an<sp/>SPL.<sp/>file&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="420"><highlight class="normal"></highlight></codeline>
-<codeline lineno="421"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data_start<sp/>=<sp/>self.f.tell()</highlight></codeline>
-<codeline lineno="422"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>manually<sp/>do<sp/>headers</highlight></codeline>
-<codeline lineno="423" refid="classpsp__io_1_1_s_p_l_input_1a52ef1d1ed9776c5b030db1356df9b4f3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>_1,_2,self.nprocs,<sp/>nbodies,<sp/>nint_attr,<sp/>nfloat_attr,<sp/>infostringlen<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.uint32,<sp/>count=7)</highlight></codeline>
-<codeline lineno="424"><highlight class="normal"></highlight></codeline>
-<codeline lineno="425"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>need<sp/>to<sp/>figure<sp/>out<sp/>what<sp/>to<sp/>do<sp/>with<sp/>nprocs...it<sp/>has<sp/>to<sp/>always<sp/>be<sp/>the<sp/>same,<sp/>right?</highlight></codeline>
-<codeline lineno="426"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.dtype((np.bytes_,<sp/>infostringlen)),count=1)</highlight></codeline>
-<codeline lineno="427"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_normal<sp/>=<sp/>head[0].decode()</highlight></codeline>
-<codeline lineno="428"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict<sp/>=<sp/>yaml.safe_load(head_normal)</highlight></codeline>
-<codeline lineno="429"><highlight class="normal"></highlight></codeline>
-<codeline lineno="430"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="431"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict[&apos;nint_attr&apos;]<sp/><sp/><sp/>=<sp/>nint_attr</highlight></codeline>
-<codeline lineno="432"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>head_dict[&apos;nfloat_attr&apos;]<sp/>=<sp/>nfloat_attr</highlight></codeline>
-<codeline lineno="433"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>data<sp/>starts<sp/>at<sp/>...</highlight></codeline>
-<codeline lineno="434"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>next_comp<sp/>=<sp/>4*7<sp/>+<sp/>infostringlen<sp/>+<sp/>data_start</highlight></codeline>
-<codeline lineno="435"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="436"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.component_map[head_dict[&apos;name&apos;]]<sp/><sp/>=<sp/>next_comp</highlight></codeline>
-<codeline lineno="437"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.header[head_dict[&apos;name&apos;]]<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>=<sp/>head_dict</highlight></codeline>
-<codeline lineno="438"><highlight class="normal"></highlight></codeline>
-<codeline lineno="439"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>next_comp<sp/>+=<sp/><sp/>self.nprocs*1024</highlight></codeline>
-<codeline lineno="440"><highlight class="normal"></highlight></codeline>
-<codeline lineno="441"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>specifically<sp/>look<sp/>for<sp/>indexing</highlight></codeline>
-<codeline lineno="442"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>try:</highlight></codeline>
-<codeline lineno="443" refid="classpsp__io_1_1_s_p_l_input_1a9b161af89ccca6e0a707bf4e1d82b01d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.indexing<sp/>=<sp/>head_dict[&apos;parameters&apos;][&apos;indexing&apos;]</highlight></codeline>
-<codeline lineno="444"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>except:</highlight></codeline>
-<codeline lineno="445"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.indexing<sp/>=<sp/>head_dict[&apos;indexing&apos;]==&apos;true&apos;</highlight></codeline>
-<codeline lineno="446"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="447"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>return<sp/>next_comp</highlight></codeline>
-<codeline lineno="448"><highlight class="normal"></highlight></codeline>
-<codeline lineno="449"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="450"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_make_spl_file_list(self,comp):</highlight></codeline>
-<codeline lineno="451"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="452"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.seek(self.component_map[comp])</highlight></codeline>
-<codeline lineno="453"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="454"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>PBUF_SZ<sp/>=<sp/>1024</highlight></codeline>
-<codeline lineno="455"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>PBUF_SM<sp/>=<sp/>32</highlight></codeline>
-<codeline lineno="456"><highlight class="normal"></highlight></codeline>
-<codeline lineno="457" refid="classpsp__io_1_1_s_p_l_input_1a2c4f830d66d53dd3f195dcea6b55eb76" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.subfiles<sp/>=<sp/>[]</highlight></codeline>
-<codeline lineno="458"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="459"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>procnum<sp/>in<sp/>range(0,self.nprocs):</highlight></codeline>
-<codeline lineno="460"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>PBUF<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.dtype((np.bytes_,<sp/>PBUF_SZ)),count=1)</highlight></codeline>
-<codeline lineno="461"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>subfile<sp/>=<sp/>PBUF[0].split(b&apos;\x00&apos;)[0].decode()</highlight></codeline>
-<codeline lineno="462"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.subfiles.append(subfile)</highlight></codeline>
-<codeline lineno="463"><highlight class="normal"></highlight></codeline>
-<codeline lineno="464"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_summarise_primary_header(self):</highlight></codeline>
-<codeline lineno="465"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;a<sp/>short<sp/>summary<sp/>of<sp/>what<sp/>is<sp/>in<sp/>the<sp/>file&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="466"><highlight class="normal"></highlight></codeline>
-<codeline lineno="467"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>ncomponents<sp/>=<sp/>len(self.header.keys())</highlight></codeline>
-<codeline lineno="468"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>comp_list<sp/><sp/><sp/>=<sp/>list(self.header.keys())</highlight></codeline>
-<codeline lineno="469"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(&quot;Found<sp/>{}<sp/>components.&quot;.format(ncomponents))</highlight></codeline>
-<codeline lineno="470"><highlight class="normal"></highlight></codeline>
-<codeline lineno="471"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>n<sp/>in<sp/>range(0,ncomponents):</highlight></codeline>
-<codeline lineno="472"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(&quot;Component<sp/>{}:<sp/>{}&quot;.format(n,comp_list[n]))</highlight></codeline>
-<codeline lineno="473"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="474"><highlight class="normal"></highlight></codeline>
-<codeline lineno="475"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_read_spl_component_data(self):</highlight></codeline>
-<codeline lineno="476"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="477"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>FullParticles<sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="478"><highlight class="normal"></highlight></codeline>
-<codeline lineno="479"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>first<sp/>pass:<sp/>get<sp/>everything<sp/>into<sp/>memory</highlight></codeline>
-<codeline lineno="480"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>n<sp/>in<sp/>range(0,len(self.subfiles)):</highlight></codeline>
-<codeline lineno="481"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>FullParticles[n]<sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="482"><highlight class="normal"></highlight></codeline>
-<codeline lineno="483"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>self.verbose&gt;1:</highlight></codeline>
-<codeline lineno="484"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>print(&apos;spl_io._read_spl_component_data:<sp/>On<sp/>file<sp/>{}<sp/>of<sp/>{}.&apos;.format(n,len(self.subfiles)))</highlight></codeline>
-<codeline lineno="485"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="486"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tbl<sp/>=<sp/>self._handle_spl_subfile(self.subfiles[n])</highlight></codeline>
-<codeline lineno="487"><highlight class="normal"></highlight></codeline>
-<codeline lineno="488"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>k<sp/>in<sp/>tbl.keys():</highlight></codeline>
-<codeline lineno="489"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>FullParticles[n][k]<sp/>=<sp/>tbl[k]</highlight></codeline>
-<codeline lineno="490"><highlight class="normal"></highlight></codeline>
-<codeline lineno="491"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>construct<sp/>a<sp/>single<sp/>dictionary<sp/>for<sp/>the<sp/>particles</highlight></codeline>
-<codeline lineno="492" refid="classpsp__io_1_1_s_p_l_input_1a7f200daa7f28844e55a3353825498380" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.data<sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="493"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>k<sp/>in<sp/>tbl.keys():</highlight></codeline>
-<codeline lineno="494"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.data[k]<sp/>=<sp/>np.concatenate([FullParticles[n][k]<sp/>for<sp/>n<sp/>in<sp/>range(0,len(self.subfiles))])</highlight></codeline>
-<codeline lineno="495"><highlight class="normal"></highlight></codeline>
-<codeline lineno="496"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>cleanup...</highlight></codeline>
-<codeline lineno="497"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>del<sp/>FullParticles</highlight></codeline>
-<codeline lineno="498"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="499"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="500"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_check_magic_number(self):</highlight></codeline>
-<codeline lineno="501"><highlight class="normal"></highlight></codeline>
-<codeline lineno="502"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self.f.seek(16)<sp/><sp/>#<sp/>find<sp/>magic<sp/>number</highlight></codeline>
-<codeline lineno="503"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>cmagic,<sp/>=<sp/>np.fromfile(self.f,<sp/>dtype=np.uint32,<sp/>count=1)</highlight></codeline>
-<codeline lineno="504"><highlight class="normal"></highlight></codeline>
-<codeline lineno="505"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>check<sp/>if<sp/>it<sp/>is<sp/>float<sp/>vs.<sp/>double</highlight></codeline>
-<codeline lineno="506"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>cmagic<sp/>==<sp/>2915019716:</highlight></codeline>
-<codeline lineno="507"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_len<sp/>=<sp/>4</highlight></codeline>
-<codeline lineno="508"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_str<sp/>=<sp/>&apos;f&apos;</highlight></codeline>
-<codeline lineno="509"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>else:</highlight></codeline>
-<codeline lineno="510"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_len<sp/>=<sp/>8</highlight></codeline>
-<codeline lineno="511"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>self._float_str<sp/>=<sp/>&apos;d&apos;</highlight></codeline>
-<codeline lineno="512"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="513"><highlight class="normal"></highlight></codeline>
-<codeline lineno="514"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_handle_spl_subfile(self,subfilename):</highlight></codeline>
-<codeline lineno="515"><highlight class="normal"></highlight></codeline>
-<codeline lineno="516"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>subfile<sp/>=<sp/>open(self.indir+subfilename,&apos;rb&apos;)</highlight></codeline>
-<codeline lineno="517"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>nbodies,<sp/>=<sp/>np.fromfile(subfile,<sp/>dtype=np.uint32,<sp/>count=1)</highlight></codeline>
-<codeline lineno="518"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>subfile.close()<sp/>#<sp/>close<sp/>the<sp/>opened<sp/>file</highlight></codeline>
-<codeline lineno="519"><highlight class="normal"></highlight></codeline>
-<codeline lineno="520"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>read<sp/>the<sp/>data</highlight></codeline>
-<codeline lineno="521"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tbl<sp/>=<sp/>self._read_component_data(self.indir+subfilename,nbodies,4)</highlight></codeline>
-<codeline lineno="522"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>the<sp/>offset<sp/>is<sp/>always<sp/>fixed<sp/>in<sp/>SPL<sp/>subfiles</highlight></codeline>
-<codeline lineno="523"><highlight class="normal"></highlight></codeline>
-<codeline lineno="524"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>return<sp/>tbl</highlight></codeline>
-<codeline lineno="525"><highlight class="normal"></highlight></codeline>
-<codeline lineno="526"><highlight class="normal"></highlight></codeline>
-<codeline lineno="527"><highlight class="normal"><sp/><sp/><sp/><sp/>def<sp/>_read_component_data(self,filename,nbodies,offset):</highlight></codeline>
-<codeline lineno="528"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&quot;&quot;&quot;read<sp/>in<sp/>all<sp/>data<sp/>for<sp/>component&quot;&quot;&quot;</highlight></codeline>
-<codeline lineno="529"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="530"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>[]</highlight></codeline>
-<codeline lineno="531"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/><sp/>=<sp/>[]</highlight></codeline>
-<codeline lineno="532"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>if<sp/>self.header[self.comp][&apos;parameters&apos;][&apos;indexing&apos;]:</highlight></codeline>
-<codeline lineno="533"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>#<sp/>if<sp/>indexing<sp/>is<sp/>on,<sp/>the<sp/>0th<sp/>column<sp/>is<sp/>Long</highlight></codeline>
-<codeline lineno="534"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>dtype_str<sp/>+<sp/>[&apos;l&apos;]</highlight></codeline>
-<codeline lineno="535"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/><sp/>=<sp/>colnames<sp/>+<sp/>[&apos;index&apos;]</highlight></codeline>
-<codeline lineno="536"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="537"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>dtype_str<sp/>+<sp/>[self._float_str]<sp/>*<sp/>8</highlight></codeline>
-<codeline lineno="538"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/>=<sp/>colnames<sp/>+<sp/>[&apos;m&apos;,<sp/>&apos;x&apos;,<sp/>&apos;y&apos;,<sp/>&apos;z&apos;,<sp/>&apos;vx&apos;,<sp/>&apos;vy&apos;,<sp/>&apos;vz&apos;,<sp/>&apos;potE&apos;]</highlight></codeline>
-<codeline lineno="539"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="540"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>dtype_str<sp/>+<sp/>[&apos;i&apos;]<sp/>*<sp/>self.header[self.comp][&apos;nint_attr&apos;]</highlight></codeline>
-<codeline lineno="541"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/>=<sp/>colnames<sp/>+<sp/>[&apos;i_attr{}&apos;.format(i)</highlight></codeline>
-<codeline lineno="542"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>i<sp/>in<sp/>range(self.header[self.comp][&apos;nint_attr&apos;])]</highlight></codeline>
-<codeline lineno="543"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="544"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype_str<sp/>=<sp/>dtype_str<sp/>+<sp/>[self._float_str]<sp/>*<sp/>self.header[self.comp][&apos;nfloat_attr&apos;]</highlight></codeline>
-<codeline lineno="545"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>colnames<sp/>=<sp/>colnames<sp/>+<sp/>[&apos;f_attr{}&apos;.format(i)</highlight></codeline>
-<codeline lineno="546"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>i<sp/>in<sp/>range(self.header[self.comp][&apos;nfloat_attr&apos;])]</highlight></codeline>
-<codeline lineno="547"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="548"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype<sp/>=<sp/>np.dtype(&apos;,&apos;.join(dtype_str))</highlight></codeline>
-<codeline lineno="549"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="550"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>out<sp/>=<sp/>np.memmap(filename,</highlight></codeline>
-<codeline lineno="551"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>dtype=dtype,</highlight></codeline>
-<codeline lineno="552"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>shape=(1,<sp/>nbodies),</highlight></codeline>
-<codeline lineno="553"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>offset=offset,</highlight></codeline>
-<codeline lineno="554"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>order=&apos;F&apos;,<sp/>mode=&apos;r&apos;)</highlight></codeline>
-<codeline lineno="555"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="556"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tbl<sp/>=<sp/>dict()</highlight></codeline>
-<codeline lineno="557"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>for<sp/>i,<sp/>name<sp/>in<sp/>enumerate(colnames):</highlight></codeline>
-<codeline lineno="558"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>tbl[name]<sp/>=<sp/>np.array(out[&apos;f{}&apos;.format(i)][0],<sp/>copy=True)</highlight></codeline>
-<codeline lineno="559"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="560"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>del<sp/>out<sp/><sp/>#<sp/>close<sp/>the<sp/>memmap<sp/>instance</highlight></codeline>
-<codeline lineno="561"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="562"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>return<sp/>tbl</highlight></codeline>
-<codeline lineno="563"><highlight class="normal"></highlight></codeline>
-<codeline lineno="564"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/psp_io.py"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/rotcurv_8_h.xml b/doxyxml/rotcurv_8_h.xml
deleted file mode 100644
index 66ed729..0000000
--- a/doxyxml/rotcurv_8_h.xml
+++ /dev/null
@@ -1,124 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="rotcurv_8_h" kind="file" language="C++">
-    <compoundname>rotcurv.H</compoundname>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="rotcurv_8_h_1af915d907d2645c8177ca72add6eaf382" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double epicyclic_kappa</definition>
-        <argsstring>(double)</argsstring>
-        <name>epicyclic_kappa</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/rotcurv.H" line="8" column="8" declfile="/home/weinberg/Projects/EXP/include/rotcurv.H" declline="8" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="rotcurv_8_h_1a269f47ae9257a21c0cb65849f95856ce" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double omega_circ</definition>
-        <argsstring>(double)</argsstring>
-        <name>omega_circ</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/rotcurv.H" line="7" column="8" declfile="/home/weinberg/Projects/EXP/include/rotcurv.H" declline="7" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="rotcurv_8_h_1a0c9d268d5ed44daa11f4fb509da934d5" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Oort_A</definition>
-        <argsstring>(double)</argsstring>
-        <name>Oort_A</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/rotcurv.H" line="10" column="8" declfile="/home/weinberg/Projects/EXP/include/rotcurv.H" declline="10" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="rotcurv_8_h_1a3377e87f757fd0a9b2eedfa000b28db0" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double Oort_B</definition>
-        <argsstring>(double)</argsstring>
-        <name>Oort_B</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/rotcurv.H" line="11" column="8" declfile="/home/weinberg/Projects/EXP/include/rotcurv.H" declline="11" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="rotcurv_8_h_1aa7e32e3c67df0b9093a055eccd20062a" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double v_circ</definition>
-        <argsstring>(double)</argsstring>
-        <name>v_circ</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/rotcurv.H" line="6" column="8" declfile="/home/weinberg/Projects/EXP/include/rotcurv.H" declline="6" declcolumn="8"/>
-      </memberdef>
-      <memberdef kind="function" id="rotcurv_8_h_1a7a47c6bd8133e3b423cca596337e31de" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>double</type>
-        <definition>double vertical_kappa</definition>
-        <argsstring>(double)</argsstring>
-        <name>vertical_kappa</name>
-        <param>
-          <type>double</type>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/rotcurv.H" line="9" column="8" declfile="/home/weinberg/Projects/EXP/include/rotcurv.H" declline="9" declcolumn="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>rotcurv_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>rotcurv_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="comment">//<sp/>rotation<sp/>curve<sp/>analysis</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6" refid="rotcurv_8_h_1aa7e32e3c67df0b9093a055eccd20062a" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="rotcurv_8_h_1aa7e32e3c67df0b9093a055eccd20062a" kindref="member">v_circ</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="7" refid="rotcurv_8_h_1a269f47ae9257a21c0cb65849f95856ce" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="rotcurv_8_h_1a269f47ae9257a21c0cb65849f95856ce" kindref="member">omega_circ</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="8" refid="rotcurv_8_h_1af915d907d2645c8177ca72add6eaf382" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="rotcurv_8_h_1af915d907d2645c8177ca72add6eaf382" kindref="member">epicyclic_kappa</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="9" refid="rotcurv_8_h_1a7a47c6bd8133e3b423cca596337e31de" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="rotcurv_8_h_1a7a47c6bd8133e3b423cca596337e31de" kindref="member">vertical_kappa</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="10" refid="rotcurv_8_h_1a0c9d268d5ed44daa11f4fb509da934d5" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="rotcurv_8_h_1a0c9d268d5ed44daa11f4fb509da934d5" kindref="member">Oort_A</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="11" refid="rotcurv_8_h_1a3377e87f757fd0a9b2eedfa000b28db0" refkind="member"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="rotcurv_8_h_1a3377e87f757fd0a9b2eedfa000b28db0" kindref="member">Oort_B</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/rotcurv.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/sltable_m_p2_8_h.xml b/doxyxml/sltable_m_p2_8_h.xml
deleted file mode 100644
index edf72ef..0000000
--- a/doxyxml/sltable_m_p2_8_h.xml
+++ /dev/null
@@ -1,186 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="sltable_m_p2_8_h" kind="file" language="C++">
-    <compoundname>sltableMP2.H</compoundname>
-    <includes local="no">Eigen/Eigen</includes>
-    <includedby refid="_s_l_grid_m_p2_8_h" local="no">/home/weinberg/Projects/EXP/include/SLGridMP2.H</includedby>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/sltableMP2.H</label>
-        <link refid="sltable_m_p2_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>Eigen/Eigen</label>
-      </node>
-    </incdepgraph>
-    <invincdepgraph>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/include/DiskModels.H</label>
-        <link refid="_disk_models_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-      </node>
-      <node id="3">
-        <label>/home/weinberg/Projects/EXP/include/EmpCylSL.H</label>
-        <link refid="_emp_cyl_s_l_8_h"/>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="13" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/SLGridMP2.H</label>
-        <link refid="_s_l_grid_m_p2_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/sltableMP2.H</label>
-        <link refid="sltable_m_p2_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>/home/weinberg/Projects/EXP/include/sphereSL.H</label>
-        <link refid="sphere_s_l_8_h"/>
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-<codeline lineno="25"><highlight class="normal"></highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Global<sp/>MPI<sp/>stuff</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="29" refid="class_sphere_s_l_1a19a78d9aef587d1a5a05398c9c3f15a0" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a19a78d9aef587d1a5a05398c9c3f15a0" kindref="member">mpi</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>default:<sp/>0=off</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Check<sp/>for<sp/>cached<sp/>table</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="32" refid="class_sphere_s_l_1a41cf4a3966f649b1c019494488a7c765" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">static</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">bool</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a41cf4a3966f649b1c019494488a7c765" kindref="member">cache</ref>;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>default:<sp/>true</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Constructors</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_sphere_s_l_1a7800b8f7b5fd65418eafdea9b9ce4268" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sphere_s_l_1a7800b8f7b5fd65418eafdea9b9ce4268" kindref="member">SphereSL</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1acd24934f776b69bf741d077c3c8d1c2f" kindref="member">lmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a4285acc83fe9f7d06ebe22368b58139a" kindref="member">nmax</ref>,<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a376f9832332b03a278a159c12789b61b" kindref="member">numr</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1afeef63edbcff5c1468b6b0331f99f188" kindref="member">rmin</ref>,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a37bf261b5b6f306caab7354f7d8d1a30" kindref="member">rmax</ref>,</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a01327079cfc40d347281388328d1e2db" kindref="member">scale</ref>,<sp/>std::shared_ptr&lt;SphericalModelTable&gt;<sp/>mod);</highlight></codeline>
-<codeline lineno="38" refid="class_sphere_s_l_1ae64941af3d9cba7632b9e9ea54556dc8" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_sphere_s_l_1ae64941af3d9cba7632b9e9ea54556dc8" kindref="member">~SphereSL</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>members</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_sphere_s_l_1a0618be0d4ee7e18fce3656cff6701794" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a0618be0d4ee7e18fce3656cff6701794" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="43" refid="class_sphere_s_l_1af160b934c0c8e1ad328fd2c6fab28adf" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1af160b934c0c8e1ad328fd2c6fab28adf" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_sphere_s_l_1ae73b7d81422a55ab7f4b7120e9aed111" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1ae73b7d81422a55ab7f4b7120e9aed111" kindref="member">potlR</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a0618be0d4ee7e18fce3656cff6701794" kindref="member">potl</ref>(n,<sp/>l,<sp/><ref refid="class_sphere_s_l_1ab9f7e8bfe2355df79dc7e745d2af063e" kindref="member">r_to_rb</ref>(r)<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="class_sphere_s_l_1a4879573d3c8657afe4efafc03565b862" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a4879573d3c8657afe4efafc03565b862" kindref="member">potlRZ</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>z)<sp/>{</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a0618be0d4ee7e18fce3656cff6701794" kindref="member">potl</ref>(n,<sp/>l,<sp/><ref refid="class_sphere_s_l_1ab9f7e8bfe2355df79dc7e745d2af063e" kindref="member">r_to_rb</ref>(sqrt(r*r+z*z))<sp/>);<sp/>}</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_sphere_s_l_1ad123d7ae428a8efc093510dc676e1d30" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1ad123d7ae428a8efc093510dc676e1d30" kindref="member">potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::VectorXd&amp;<sp/>t);</highlight></codeline>
-<codeline lineno="54" refid="class_sphere_s_l_1afcc06b98a7e0e4aebeccf1d64bc053b6" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1afcc06b98a7e0e4aebeccf1d64bc053b6" kindref="member">dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x,<sp/>Eigen::VectorXd&amp;<sp/>t);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_sphere_s_l_1ab9f7e8bfe2355df79dc7e745d2af063e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1ab9f7e8bfe2355df79dc7e745d2af063e" kindref="member">r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>r);</highlight></codeline>
-<codeline lineno="59" refid="class_sphere_s_l_1a670017621747229de479ba578cef996a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a670017621747229de479ba578cef996a" kindref="member">rb_to_r</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="60" refid="class_sphere_s_l_1ad6ef39426a4f8d8aaa3f8f0840fbf511" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1ad6ef39426a4f8d8aaa3f8f0840fbf511" kindref="member">d_r_to_rb</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="61" refid="class_sphere_s_l_1a6f8a05e49cc970cbf590cd237ca3cd25" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a6f8a05e49cc970cbf590cd237ca3cd25" kindref="member">rb_min</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a164273b12029f8caf7f754ca03132871" kindref="member">slgrid</ref>-&gt;<ref refid="class_s_l_grid_sph_1abd551a1660dd7f05b08729c2f177c9a5" kindref="member">r_to_xi</ref>(<ref refid="class_sphere_s_l_1afeef63edbcff5c1468b6b0331f99f188" kindref="member">rmin</ref>);<sp/>}<sp/></highlight></codeline>
-<codeline lineno="62" refid="class_sphere_s_l_1a490f65d960649770981d83d66d958435" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a490f65d960649770981d83d66d958435" kindref="member">rb_max</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a164273b12029f8caf7f754ca03132871" kindref="member">slgrid</ref>-&gt;<ref refid="class_s_l_grid_sph_1abd551a1660dd7f05b08729c2f177c9a5" kindref="member">r_to_xi</ref>(<ref refid="class_sphere_s_l_1a37bf261b5b6f306caab7354f7d8d1a30" kindref="member">rmax</ref>);<sp/>}</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64" refid="class_sphere_s_l_1a2f27b9e586510ec276aa35facb98765c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a2f27b9e586510ec276aa35facb98765c" kindref="member">get_potl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="65" refid="class_sphere_s_l_1a9e92c59228468a65cc08a86043cd8fcb" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a9e92c59228468a65cc08a86043cd8fcb" kindref="member">get_dens</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>Eigen::VectorXd&amp;<sp/>coef);</highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_sphere_s_l_1a36185e4e83af995799949cfb24d3e90b" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a36185e4e83af995799949cfb24d3e90b" kindref="member">krnl</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="68" refid="class_sphere_s_l_1a1e4ac2372c6d10c177d8639451d8eb3c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a1e4ac2372c6d10c177d8639451d8eb3c" kindref="member">norm</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>n,<sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>l)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0;<sp/>}</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"></highlight></codeline>
-<codeline lineno="70" refid="class_sphere_s_l_1a77c5b912e0ac87d08104324a62365d4a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_sphere_s_l_1a77c5b912e0ac87d08104324a62365d4a" kindref="member">d_rb_to_r</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x);</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"></highlight></codeline>
-<codeline lineno="72"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="73"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74"><highlight class="normal"></highlight><highlight class="preprocessor">#endif<sp/></highlight><highlight class="comment">//<sp/>_BiorthSL_h</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="75"><highlight class="normal"></highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/sphereSL.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/src_2coef_8_h.xml b/doxyxml/src_2coef_8_h.xml
deleted file mode 100644
index a1789a6..0000000
--- a/doxyxml/src_2coef_8_h.xml
+++ /dev/null
@@ -1,230 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="src_2coef_8_h" kind="file" language="C++">
-    <compoundname>coef.H</compoundname>
-    <includedby refid="_coefs_8_h" local="yes">/home/weinberg/Projects/EXP/include/Coefs.H</includedby>
-    <includedby refid="global_8_h" local="no">/home/weinberg/Projects/EXP/src/global.H</includedby>
-    <invincdepgraph>
-      <node id="2">
-        <label>/home/weinberg/Projects/EXP/include/Coefs.H</label>
-        <link refid="_coefs_8_h"/>
-      </node>
-      <node id="4">
-        <label>/home/weinberg/Projects/EXP/src/Component.H</label>
-        <link refid="_component_8_h"/>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="23" relation="include">
-        </childnode>
-        <childnode refid="27" relation="include">
-        </childnode>
-        <childnode refid="28" relation="include">
-        </childnode>
-        <childnode refid="29" relation="include">
-        </childnode>
-        <childnode refid="30" relation="include">
-        </childnode>
-      </node>
-      <node id="5">
-        <label>/home/weinberg/Projects/EXP/src/ComponentContainer.H</label>
-        <link refid="_component_container_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="15" relation="include">
-        </childnode>
-      </node>
-      <node id="16">
-        <label>/home/weinberg/Projects/EXP/src/CylEXP.H</label>
-        <link refid="_cyl_e_x_p_8_h"/>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
-        </childnode>
-      </node>
-      <node id="17">
-        <label>/home/weinberg/Projects/EXP/src/CylTwoD.H</label>
-        <link refid="_cyl_two_d_8_h"/>
-      </node>
-      <node id="18">
-        <label>/home/weinberg/Projects/EXP/src/Cylinder.H</label>
-        <link refid="_cylinder_8_h"/>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="20">
-        <label>/home/weinberg/Projects/EXP/src/EJcom.H</label>
-        <link refid="_e_jcom_8_h"/>
-      </node>
-      <node id="6">
-        <label>/home/weinberg/Projects/EXP/src/ExternalCollection.H</label>
-        <link refid="_external_collection_8_h"/>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
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diff --git a/doxyxml/src_2tipsydefs_8h.xml b/doxyxml/src_2tipsydefs_8h.xml
deleted file mode 100644
index 1ec03d4..0000000
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-    </programlisting>
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-</doxygen>
diff --git a/doxyxml/staeckel_8_h.xml b/doxyxml/staeckel_8_h.xml
deleted file mode 100644
index 3b1311a..0000000
--- a/doxyxml/staeckel_8_h.xml
+++ /dev/null
@@ -1,56 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="staeckel_8_h" kind="file" language="C++">
-    <compoundname>staeckel.H</compoundname>
-    <innerclass refid="class_perfect" prot="public">Perfect</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>stackel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>stackel_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_phase" kindref="compound">Phase</ref>;</highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6" refid="class_perfect" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_perfect" kindref="compound">Perfect</ref></highlight></codeline>
-<codeline lineno="7"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="9" refid="class_perfect_1a6649f7890c55659d185fc593e6f87841" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_perfect_1a6649f7890c55659d185fc593e6f87841" kindref="member">a</ref>,<sp/><ref refid="class_perfect_1a352135ef809687ada5638565ac66d622" kindref="member">b</ref>;</highlight></codeline>
-<codeline lineno="10" refid="class_perfect_1addada398ddf928531d93ad88efdc3b03" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_perfect_1addada398ddf928531d93ad88efdc3b03" kindref="member">alpha</ref>,<sp/><ref refid="class_perfect_1a0b498c98fcaad321059a6b4bb2e99c75" kindref="member">beta</ref>;</highlight></codeline>
-<codeline lineno="11" refid="class_perfect_1ad8f19c3ab380ef6f3c5bf27cba5dd589" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_perfect_1ad8f19c3ab380ef6f3c5bf27cba5dd589" kindref="member">G</ref>,<sp/><ref refid="class_perfect_1a896e531af1ece39d761550299e9a4ae2" kindref="member">M</ref>,<sp/><ref refid="class_perfect_1a20e44215515e62dfc1143c754faeeba7" kindref="member">rho0</ref>;</highlight></codeline>
-<codeline lineno="12" refid="class_perfect_1a133252f94881eff71e139a7b81e4c67c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_perfect_1a133252f94881eff71e139a7b81e4c67c" kindref="member">W0</ref>;</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="14" refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_perfect_1ab23c19427f87549d48bc9b4b8eeac716" kindref="member">set_Perfect</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>aa,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>bb,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>g,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>m)</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_perfect_1a6649f7890c55659d185fc593e6f87841" kindref="member">a</ref><sp/>=<sp/>aa;</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_perfect_1a352135ef809687ada5638565ac66d622" kindref="member">b</ref><sp/>=<sp/>bb;</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_perfect_1ad8f19c3ab380ef6f3c5bf27cba5dd589" kindref="member">G</ref><sp/>=<sp/>g;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_perfect_1a896e531af1ece39d761550299e9a4ae2" kindref="member">M</ref><sp/>=<sp/>m;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_perfect_1a133252f94881eff71e139a7b81e4c67c" kindref="member">W0</ref><sp/>=<sp/>2.0*<ref refid="class_perfect_1ad8f19c3ab380ef6f3c5bf27cba5dd589" kindref="member">G</ref>*<ref refid="class_perfect_1a896e531af1ece39d761550299e9a4ae2" kindref="member">M</ref>/<ref refid="class_perfect_1a6649f7890c55659d185fc593e6f87841" kindref="member">a</ref>/<ref refid="numerical_8_h_1ad37e1b7740e725cb44517fce48e5e3ab" kindref="member">Pi</ref>;</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_perfect_1addada398ddf928531d93ad88efdc3b03" kindref="member">alpha</ref><sp/>=<sp/>-<ref refid="class_perfect_1a6649f7890c55659d185fc593e6f87841" kindref="member">a</ref>*<ref refid="class_perfect_1a6649f7890c55659d185fc593e6f87841" kindref="member">a</ref>;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_perfect_1a0b498c98fcaad321059a6b4bb2e99c75" kindref="member">beta</ref><sp/>=<sp/>-<ref refid="class_perfect_1a352135ef809687ada5638565ac66d622" kindref="member">b</ref>*<ref refid="class_perfect_1a352135ef809687ada5638565ac66d622" kindref="member">b</ref>;</highlight></codeline>
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-<codeline lineno="25" refid="class_perfect_1ae275bed6a5f53f2f44c3e1af6b503bf4" refkind="member"><highlight class="normal"><sp/><sp/>Eigen::Vector3d<sp/><ref refid="class_perfect_1ae275bed6a5f53f2f44c3e1af6b503bf4" kindref="member">force</ref>(Eigen::Vector3d<sp/>&amp;);</highlight></codeline>
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diff --git a/doxyxml/struct_a_n_g_l_e___g_r_i_d.xml b/doxyxml/struct_a_n_g_l_e___g_r_i_d.xml
deleted file mode 100644
index a612685..0000000
--- a/doxyxml/struct_a_n_g_l_e___g_r_i_d.xml
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@@ -1,121 +0,0 @@
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diff --git a/doxyxml/struct_color_gradient_1_1_color_point.xml b/doxyxml/struct_color_gradient_1_1_color_point.xml
deleted file mode 100644
index a0dc5df..0000000
--- a/doxyxml/struct_color_gradient_1_1_color_point.xml
+++ /dev/null
@@ -1,114 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_color_gradient_1_1_color_point" kind="struct" language="C++" prot="private">
-    <compoundname>ColorGradient::ColorPoint</compoundname>
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-        <definition>float ColorGradient::ColorPoint::b</definition>
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-        <location file="/home/weinberg/Projects/EXP/include/ColorGradient.H" line="13" column="15" bodyfile="/home/weinberg/Projects/EXP/include/ColorGradient.H" bodystart="13" bodyend="-1"/>
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-<para>Red, green and blue values of our color. </para>
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-<para>Position of our color along the gradient (between 0 and 1). </para>
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diff --git a/doxyxml/struct_cyl_coef_header.xml b/doxyxml/struct_cyl_coef_header.xml
deleted file mode 100644
index f314eca..0000000
--- a/doxyxml/struct_cyl_coef_header.xml
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diff --git a/doxyxml/struct_cyl_coefs.xml b/doxyxml/struct_cyl_coefs.xml
deleted file mode 100644
index d4477aa..0000000
--- a/doxyxml/struct_cyl_coefs.xml
+++ /dev/null
@@ -1,132 +0,0 @@
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deleted file mode 100644
index c933f8b..0000000
--- a/doxyxml/struct_emp_cyl_s_l_1_1_coef_matrix.xml
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deleted file mode 100644
index d5f4a99..0000000
--- a/doxyxml/struct_emp_cyl_s_l_1_1_coef_vector.xml
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deleted file mode 100644
index 585c1a3..0000000
--- a/doxyxml/struct_emp_cyl_s_l_1_1_mstep_array.xml
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deleted file mode 100644
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deleted file mode 100644
index 7dc045c..0000000
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deleted file mode 100644
index e6adce3..0000000
--- a/doxyxml/struct_k_dtree_1_1kdtree_1_1node.xml
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deleted file mode 100644
index b70ae1e..0000000
--- a/doxyxml/struct_k_dtree_1_1kdtree_1_1node__cmp.xml
+++ /dev/null
@@ -1,78 +0,0 @@
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deleted file mode 100644
index 60d3477..0000000
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deleted file mode 100644
index 60bc8d2..0000000
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deleted file mode 100644
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-  <compounddef id="struct_pot_accel_1_1_n_data" kind="struct" language="C++" prot="public">
-    <compoundname>PotAccel::NData</compoundname>
-    <includes refid="_pot_accel_8_h" local="no">PotAccel.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="struct_pot_accel_1_1_n_data_1a87c7cde8c24f051e2c261caf45ad1c02" prot="public" static="no" mutable="no">
-        <type>string</type>
-        <definition>string PotAccel::NData::name</definition>
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-        <name>name</name>
-        <qualifiedname>PotAccel::NData::name</qualifiedname>
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-        </briefdescription>
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-        <type>int</type>
-        <definition>int PotAccel::NData::node</definition>
-        <argsstring></argsstring>
-        <name>node</name>
-        <qualifiedname>PotAccel::NData::node</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="100" column="9" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="100" bodyend="-1"/>
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-        <type>int</type>
-        <definition>int PotAccel::NData::tid</definition>
-        <argsstring></argsstring>
-        <name>tid</name>
-        <qualifiedname>PotAccel::NData::tid</qualifiedname>
-        <briefdescription>
-        </briefdescription>
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-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="101" column="9" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="101" bodyend="-1"/>
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-<para>For timing data. </para>
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-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="99" column="3" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="99" bodyend="103"/>
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-      <member refid="struct_pot_accel_1_1_n_data_1a87c7cde8c24f051e2c261caf45ad1c02" prot="public" virt="non-virtual"><scope>PotAccel::NData</scope><name>name</name></member>
-      <member refid="struct_pot_accel_1_1_n_data_1a670ee1199a2e894456a9da537dada27b" prot="public" virt="non-virtual"><scope>PotAccel::NData</scope><name>node</name></member>
-      <member refid="struct_pot_accel_1_1_n_data_1a73ef2eda0e2273e036cecbd7d63acf37" prot="public" virt="non-virtual"><scope>PotAccel::NData</scope><name>tid</name></member>
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diff --git a/doxyxml/struct_slab_s_l_1_1_slab_s_l_coef_header.xml b/doxyxml/struct_slab_s_l_1_1_slab_s_l_coef_header.xml
deleted file mode 100644
index 383c90d..0000000
--- a/doxyxml/struct_slab_s_l_1_1_slab_s_l_coef_header.xml
+++ /dev/null
@@ -1,136 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_slab_s_l_1_1_slab_s_l_coef_header" kind="struct" language="C++" prot="private">
-    <compoundname>SlabSL::SlabSLCoefHeader</compoundname>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="struct_slab_s_l_1_1_slab_s_l_coef_header_1a4ecff0f085fd829e6bfc9b2a169d70ae" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SlabSL::SlabSLCoefHeader::h</definition>
-        <argsstring></argsstring>
-        <name>h</name>
-        <qualifiedname>SlabSL::SlabSLCoefHeader::h</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="31" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_slab_s_l_1_1_slab_s_l_coef_header_1aee8294b3bd72f3d483949ca126cccb39" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SlabSL::SlabSLCoefHeader::jmax</definition>
-        <argsstring></argsstring>
-        <name>jmax</name>
-        <qualifiedname>SlabSL::SlabSLCoefHeader::jmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="34" column="7" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="34" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_slab_s_l_1_1_slab_s_l_coef_header_1a77c431f28ea2639f3b452357613b6299" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SlabSL::SlabSLCoefHeader::nmaxx</definition>
-        <argsstring></argsstring>
-        <name>nmaxx</name>
-        <qualifiedname>SlabSL::SlabSLCoefHeader::nmaxx</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="33" column="7" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_slab_s_l_1_1_slab_s_l_coef_header_1adf8f003dd53c86e15de7029e387e781e" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SlabSL::SlabSLCoefHeader::nmaxy</definition>
-        <argsstring></argsstring>
-        <name>nmaxy</name>
-        <qualifiedname>SlabSL::SlabSLCoefHeader::nmaxy</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="33" column="13" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_slab_s_l_1_1_slab_s_l_coef_header_1a3b37675920d474a0f1cd278755709746" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SlabSL::SlabSLCoefHeader::nmaxz</definition>
-        <argsstring></argsstring>
-        <name>nmaxz</name>
-        <qualifiedname>SlabSL::SlabSLCoefHeader::nmaxz</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="33" column="19" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_slab_s_l_1_1_slab_s_l_coef_header_1aec297657d667a4b59be1b0265b480dc6" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SlabSL::SlabSLCoefHeader::time</definition>
-        <argsstring></argsstring>
-        <name>time</name>
-        <qualifiedname>SlabSL::SlabSLCoefHeader::time</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="29" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="29" bodyend="-1"/>
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-      <memberdef kind="variable" id="struct_slab_s_l_1_1_slab_s_l_coef_header_1af840d148734f82c031337ccc4d575ac6" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SlabSL::SlabSLCoefHeader::type</definition>
-        <argsstring></argsstring>
-        <name>type</name>
-        <qualifiedname>SlabSL::SlabSLCoefHeader::type</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="32" column="7" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="32" bodyend="-1"/>
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-      <memberdef kind="variable" id="struct_slab_s_l_1_1_slab_s_l_coef_header_1a0fecba0903bd544a630c5ff8400175c9" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SlabSL::SlabSLCoefHeader::zmax</definition>
-        <argsstring></argsstring>
-        <name>zmax</name>
-        <qualifiedname>SlabSL::SlabSLCoefHeader::zmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="30" column="10" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-<para>Header structure for Sturm-Liouville slab expansion Used for deprecated native coefficient files </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/SlabSL.H" line="28" column="1" bodyfile="/home/weinberg/Projects/EXP/src/SlabSL.H" bodystart="28" bodyend="35"/>
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-      <member refid="struct_slab_s_l_1_1_slab_s_l_coef_header_1a4ecff0f085fd829e6bfc9b2a169d70ae" prot="public" virt="non-virtual"><scope>SlabSL::SlabSLCoefHeader</scope><name>h</name></member>
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-      <member refid="struct_slab_s_l_1_1_slab_s_l_coef_header_1adf8f003dd53c86e15de7029e387e781e" prot="public" virt="non-virtual"><scope>SlabSL::SlabSLCoefHeader</scope><name>nmaxy</name></member>
-      <member refid="struct_slab_s_l_1_1_slab_s_l_coef_header_1a3b37675920d474a0f1cd278755709746" prot="public" virt="non-virtual"><scope>SlabSL::SlabSLCoefHeader</scope><name>nmaxz</name></member>
-      <member refid="struct_slab_s_l_1_1_slab_s_l_coef_header_1aec297657d667a4b59be1b0265b480dc6" prot="public" virt="non-virtual"><scope>SlabSL::SlabSLCoefHeader</scope><name>time</name></member>
-      <member refid="struct_slab_s_l_1_1_slab_s_l_coef_header_1af840d148734f82c031337ccc4d575ac6" prot="public" virt="non-virtual"><scope>SlabSL::SlabSLCoefHeader</scope><name>type</name></member>
-      <member refid="struct_slab_s_l_1_1_slab_s_l_coef_header_1a0fecba0903bd544a630c5ff8400175c9" prot="public" virt="non-virtual"><scope>SlabSL::SlabSLCoefHeader</scope><name>zmax</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/struct_sph_coef_header.xml b/doxyxml/struct_sph_coef_header.xml
deleted file mode 100644
index 50295e5..0000000
--- a/doxyxml/struct_sph_coef_header.xml
+++ /dev/null
@@ -1,92 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_sph_coef_header" kind="struct" language="C++" prot="public">
-    <compoundname>SphCoefHeader</compoundname>
-    <includes refid="include_2coef_8_h" local="no">coef.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="struct_sph_coef_header_1ae0ba41b9621e7033f594a26c5d37004a" prot="public" static="no" mutable="no">
-        <type>char</type>
-        <definition>char SphCoefHeader::id</definition>
-        <argsstring>[64]</argsstring>
-        <name>id</name>
-        <qualifiedname>SphCoefHeader::id</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/coef.H" line="20" column="10" bodyfile="/home/weinberg/Projects/EXP/include/coef.H" bodystart="20" bodyend="-1"/>
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-      <memberdef kind="variable" id="struct_sph_coef_header_1a900a12efe78cd6d4e021ab15b417af1e" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SphCoefHeader::Lmax</definition>
-        <argsstring></argsstring>
-        <name>Lmax</name>
-        <qualifiedname>SphCoefHeader::Lmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/coef.H" line="24" column="10" bodyfile="/home/weinberg/Projects/EXP/include/coef.H" bodystart="24" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_sph_coef_header_1a3364b3d2a356c8907eaa8d7c5636bf46" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int SphCoefHeader::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>SphCoefHeader::nmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/coef.H" line="23" column="10" bodyfile="/home/weinberg/Projects/EXP/include/coef.H" bodystart="23" bodyend="-1"/>
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-      <memberdef kind="variable" id="struct_sph_coef_header_1a1ad744972d26cf7fbe3af69f86537fa9" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphCoefHeader::scale</definition>
-        <argsstring></argsstring>
-        <name>scale</name>
-        <qualifiedname>SphCoefHeader::scale</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/coef.H" line="22" column="10" bodyfile="/home/weinberg/Projects/EXP/include/coef.H" bodystart="22" bodyend="-1"/>
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-      <memberdef kind="variable" id="struct_sph_coef_header_1ad13f98e01bdd4cdb46a6d4ccf047f0fb" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double SphCoefHeader::tnow</definition>
-        <argsstring></argsstring>
-        <name>tnow</name>
-        <qualifiedname>SphCoefHeader::tnow</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
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-        <location file="/home/weinberg/Projects/EXP/include/coef.H" line="21" column="10" bodyfile="/home/weinberg/Projects/EXP/include/coef.H" bodystart="21" bodyend="-1"/>
-      </memberdef>
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-    <briefdescription>
-<para>Header structure for spherical expansion. </para>
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-    <location file="/home/weinberg/Projects/EXP/include/coef.H" line="18" column="1" bodyfile="/home/weinberg/Projects/EXP/include/coef.H" bodystart="19" bodyend="25"/>
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-      <member refid="struct_sph_coef_header_1ae0ba41b9621e7033f594a26c5d37004a" prot="public" virt="non-virtual"><scope>SphCoefHeader</scope><name>id</name></member>
-      <member refid="struct_sph_coef_header_1a900a12efe78cd6d4e021ab15b417af1e" prot="public" virt="non-virtual"><scope>SphCoefHeader</scope><name>Lmax</name></member>
-      <member refid="struct_sph_coef_header_1a3364b3d2a356c8907eaa8d7c5636bf46" prot="public" virt="non-virtual"><scope>SphCoefHeader</scope><name>nmax</name></member>
-      <member refid="struct_sph_coef_header_1a1ad744972d26cf7fbe3af69f86537fa9" prot="public" virt="non-virtual"><scope>SphCoefHeader</scope><name>scale</name></member>
-      <member refid="struct_sph_coef_header_1ad13f98e01bdd4cdb46a6d4ccf047f0fb" prot="public" virt="non-virtual"><scope>SphCoefHeader</scope><name>tnow</name></member>
-    </listofallmembers>
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diff --git a/doxyxml/struct_sph_coefs.xml b/doxyxml/struct_sph_coefs.xml
deleted file mode 100644
index 71ed012..0000000
--- a/doxyxml/struct_sph_coefs.xml
+++ /dev/null
@@ -1,116 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_sph_coefs" kind="struct" language="C++" prot="public">
-    <compoundname>SphCoefs</compoundname>
-    <includes refid="_coefs_8_h" local="no">Coefs.H</includes>
-    <sectiondef kind="public-type">
-      <memberdef kind="typedef" id="struct_sph_coefs_1ad858843b8462b41cb636e3c5ef58f298" prot="public" static="no">
-        <type>Eigen::Matrix&lt; double, Eigen::Dynamic, Eigen::Dynamic, Eigen::ColMajor &gt;</type>
-        <definition>typedef Eigen::Matrix&lt;double, Eigen::Dynamic, Eigen::Dynamic, Eigen::ColMajor&gt; SphCoefs::EigenColMajor</definition>
-        <argsstring></argsstring>
-        <name>EigenColMajor</name>
-        <qualifiedname>SphCoefs::EigenColMajor</qualifiedname>
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-        <location file="/home/weinberg/Projects/EXP/include/Coefs.H" line="30" column="3" bodyfile="/home/weinberg/Projects/EXP/include/Coefs.H" bodystart="30" bodyend="-1"/>
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-        <type>std::shared_ptr&lt; char[]&gt;</type>
-        <definition>std::shared_ptr&lt;char[]&gt; SphCoefs::buf</definition>
-        <argsstring></argsstring>
-        <name>buf</name>
-        <qualifiedname>SphCoefs::buf</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Coefs.H" line="25" column="19" bodyfile="/home/weinberg/Projects/EXP/include/Coefs.H" bodystart="25" bodyend="-1"/>
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-      <memberdef kind="variable" id="struct_sph_coefs_1a1f5bee5dd88b4f1d60c41af4a2748d84" prot="public" static="no" mutable="no">
-        <type><ref refid="struct_sph_coefs_1ad858843b8462b41cb636e3c5ef58f298" kindref="member">EigenColMajor</ref></type>
-        <definition>EigenColMajor SphCoefs::coefs</definition>
-        <argsstring></argsstring>
-        <name>coefs</name>
-        <qualifiedname>SphCoefs::coefs</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Coefs.H" line="32" column="17" bodyfile="/home/weinberg/Projects/EXP/include/Coefs.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_sph_coefs_1acd556af43e937c6ca856a2adbd556249" prot="public" static="no" mutable="no">
-        <type><ref refid="struct_sph_coef_header" kindref="compound">SphCoefHeader</ref></type>
-        <definition>SphCoefHeader SphCoefs::header</definition>
-        <argsstring></argsstring>
-        <name>header</name>
-        <qualifiedname>SphCoefs::header</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Coefs.H" line="26" column="17" bodyfile="/home/weinberg/Projects/EXP/include/Coefs.H" bodystart="26" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="struct_sph_coefs_1ae810f4d1e433e00b98a4e6a2745615ee" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool SphCoefs::read</definition>
-        <argsstring>(std::istream &amp;in, bool exp_type)</argsstring>
-        <name>read</name>
-        <qualifiedname>SphCoefs::read</qualifiedname>
-        <param>
-          <type>std::istream &amp;</type>
-          <declname>in</declname>
-        </param>
-        <param>
-          <type>bool</type>
-          <declname>exp_type</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/Coefs.H" line="34" column="8"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="2">
-        <label>SphCoefHeader</label>
-        <link refid="struct_sph_coef_header"/>
-      </node>
-      <node id="1">
-        <label>SphCoefs</label>
-        <link refid="struct_sph_coefs"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>header</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/Coefs.H" line="23" column="1" bodyfile="/home/weinberg/Projects/EXP/include/Coefs.H" bodystart="24" bodyend="35"/>
-    <listofallmembers>
-      <member refid="struct_sph_coefs_1a1af2fa2af96e30dae8746f9a348560c1" prot="public" virt="non-virtual"><scope>SphCoefs</scope><name>buf</name></member>
-      <member refid="struct_sph_coefs_1a1f5bee5dd88b4f1d60c41af4a2748d84" prot="public" virt="non-virtual"><scope>SphCoefs</scope><name>coefs</name></member>
-      <member refid="struct_sph_coefs_1ad858843b8462b41cb636e3c5ef58f298" prot="public" virt="non-virtual"><scope>SphCoefs</scope><name>EigenColMajor</name></member>
-      <member refid="struct_sph_coefs_1acd556af43e937c6ca856a2adbd556249" prot="public" virt="non-virtual"><scope>SphCoefs</scope><name>header</name></member>
-      <member refid="struct_sph_coefs_1ae810f4d1e433e00b98a4e6a2745615ee" prot="public" virt="non-virtual"><scope>SphCoefs</scope><name>read</name></member>
-    </listofallmembers>
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-</doxygen>
diff --git a/doxyxml/struct_tipsy_reader_1_1_header.xml b/doxyxml/struct_tipsy_reader_1_1_header.xml
deleted file mode 100644
index 5fa6697..0000000
--- a/doxyxml/struct_tipsy_reader_1_1_header.xml
+++ /dev/null
@@ -1,113 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_tipsy_reader_1_1_header" kind="struct" language="C++" prot="public">
-    <compoundname>TipsyReader::Header</compoundname>
-    <includes refid="tipsy_8_h" local="no">tipsy.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1_header_1abfbcb8f5b10f524234005185c3605777" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TipsyReader::Header::nbodies</definition>
-        <argsstring></argsstring>
-        <name>nbodies</name>
-        <qualifiedname>TipsyReader::Header::nbodies</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="85" column="9" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="85" bodyend="-1"/>
-        <referencedby refid="class_tipsy_reader_1_1_tipsy_native_1a07e65f7d2700db13e08d54d6c44e268a" compoundref="tipsy_8_h" startline="256" endline="272">TipsyReader::TipsyNative::native_init</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1_header_1a9f2e10581ac89a477290bcec9dd5358d" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TipsyReader::Header::ndark</definition>
-        <argsstring></argsstring>
-        <name>ndark</name>
-        <qualifiedname>TipsyReader::Header::ndark</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="88" column="9" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="88" bodyend="-1"/>
-        <referencedby refid="class_tipsy_reader_1_1_tipsy_native_1ab8688a140fee2a3d8c0b94481c500f57" compoundref="tipsy_8_h" startline="274" endline="297">TipsyReader::TipsyNative::native_read</referencedby>
-        <referencedby refid="class_tipsy_reader_1_1_tipsy_native_1ad3739c9bd257cb62cad6784202129f51" compoundref="tipsy_8_h" startline="312" endline="323">TipsyReader::TipsyNative::read_dark</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1_header_1acfbd91ee8125a0ec4f463c1e29c43750" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TipsyReader::Header::ndim</definition>
-        <argsstring></argsstring>
-        <name>ndim</name>
-        <qualifiedname>TipsyReader::Header::ndim</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="86" column="9" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="86" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1_header_1a07d0d31be0256e96afdbed8a7f622476" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TipsyReader::Header::nsph</definition>
-        <argsstring></argsstring>
-        <name>nsph</name>
-        <qualifiedname>TipsyReader::Header::nsph</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="87" column="9" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="87" bodyend="-1"/>
-        <referencedby refid="class_tipsy_reader_1_1_tipsy_native_1ab8688a140fee2a3d8c0b94481c500f57" compoundref="tipsy_8_h" startline="274" endline="297">TipsyReader::TipsyNative::native_read</referencedby>
-        <referencedby refid="class_tipsy_reader_1_1_tipsy_native_1aec4f36487917406de9f211144528c736" compoundref="tipsy_8_h" startline="299" endline="310">TipsyReader::TipsyNative::read_gas</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1_header_1a1a2dbd64e45844a7b922ead0e91e7d43" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TipsyReader::Header::nstar</definition>
-        <argsstring></argsstring>
-        <name>nstar</name>
-        <qualifiedname>TipsyReader::Header::nstar</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="89" column="9" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="89" bodyend="-1"/>
-        <referencedby refid="class_tipsy_reader_1_1_tipsy_native_1ab8688a140fee2a3d8c0b94481c500f57" compoundref="tipsy_8_h" startline="274" endline="297">TipsyReader::TipsyNative::native_read</referencedby>
-        <referencedby refid="class_tipsy_reader_1_1_tipsy_native_1aea58f6fa793355dc00bfb917c9e04b9c" compoundref="tipsy_8_h" startline="325" endline="336">TipsyReader::TipsyNative::read_star</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1_header_1a58316e2733c7431ff70b99520416fabb" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double TipsyReader::Header::time</definition>
-        <argsstring></argsstring>
-        <name>time</name>
-        <qualifiedname>TipsyReader::Header::time</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="84" column="12" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="84" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="82" column="3" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="83" bodyend="93"/>
-    <listofallmembers>
-      <member refid="struct_tipsy_reader_1_1_header_1abfbcb8f5b10f524234005185c3605777" prot="public" virt="non-virtual"><scope>TipsyReader::Header</scope><name>nbodies</name></member>
-      <member refid="struct_tipsy_reader_1_1_header_1a9f2e10581ac89a477290bcec9dd5358d" prot="public" virt="non-virtual"><scope>TipsyReader::Header</scope><name>ndark</name></member>
-      <member refid="struct_tipsy_reader_1_1_header_1acfbd91ee8125a0ec4f463c1e29c43750" prot="public" virt="non-virtual"><scope>TipsyReader::Header</scope><name>ndim</name></member>
-      <member refid="struct_tipsy_reader_1_1_header_1a07d0d31be0256e96afdbed8a7f622476" prot="public" virt="non-virtual"><scope>TipsyReader::Header</scope><name>nsph</name></member>
-      <member refid="struct_tipsy_reader_1_1_header_1a1a2dbd64e45844a7b922ead0e91e7d43" prot="public" virt="non-virtual"><scope>TipsyReader::Header</scope><name>nstar</name></member>
-      <member refid="struct_tipsy_reader_1_1_header_1a58316e2733c7431ff70b99520416fabb" prot="public" virt="non-virtual"><scope>TipsyReader::Header</scope><name>time</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/struct_tipsy_reader_1_1dark__particle.xml b/doxyxml/struct_tipsy_reader_1_1dark__particle.xml
deleted file mode 100644
index 2153b6c..0000000
--- a/doxyxml/struct_tipsy_reader_1_1dark__particle.xml
+++ /dev/null
@@ -1,112 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_tipsy_reader_1_1dark__particle" kind="struct" language="C++" prot="public">
-    <compoundname>TipsyReader::dark_particle</compoundname>
-    <includes refid="tipsy_8_h" local="no">tipsy.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1dark__particle_1a1533fc2fab052f3b9c7d252bb91cac42" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::dark_particle::eps</definition>
-        <argsstring></argsstring>
-        <name>eps</name>
-        <qualifiedname>TipsyReader::dark_particle::eps</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="51" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="51" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1dark__particle_1a4b9207514953615d6892b9114fe59444" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::dark_particle::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>TipsyReader::dark_particle::mass</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> data. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="48" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="48" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1dark__particle_1a63afa46b9f9a18ad00f631885adabf69" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::dark_particle::phi</definition>
-        <argsstring></argsstring>
-        <name>phi</name>
-        <qualifiedname>TipsyReader::dark_particle::phi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="52" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="52" bodyend="-1"/>
-        <referencedby refid="struct_tipsy_reader_1_1dark__particle_1a08b7b65380c2148be53d356438fab7f4" compoundref="tipsy_8_h" startline="56" endline="59">ID</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1dark__particle_1a1fa66fabc8a7a537033ff059f7cf17c1" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::dark_particle::pos[MAXDIM]</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>pos</name>
-        <qualifiedname>TipsyReader::dark_particle::pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="49" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="49" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1dark__particle_1a2697460ba618a3aa4e485afdc0d41a7d" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::dark_particle::vel[MAXDIM]</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>vel</name>
-        <qualifiedname>TipsyReader::dark_particle::vel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="50" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="50" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="struct_tipsy_reader_1_1dark__particle_1a08b7b65380c2148be53d356438fab7f4" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int TipsyReader::dark_particle::ID</definition>
-        <argsstring>() const</argsstring>
-        <name>ID</name>
-        <qualifiedname>TipsyReader::dark_particle::ID</qualifiedname>
-        <briefdescription>
-<para>Convert phi to index. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="56" column="9" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="56" bodyend="59"/>
-        <references refid="struct_tipsy_reader_1_1dark__particle_1a63afa46b9f9a18ad00f631885adabf69" compoundref="tipsy_8_h" startline="52">phi</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="44" column="3" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="45" bodyend="60"/>
-    <listofallmembers>
-      <member refid="struct_tipsy_reader_1_1dark__particle_1a1533fc2fab052f3b9c7d252bb91cac42" prot="public" virt="non-virtual"><scope>TipsyReader::dark_particle</scope><name>eps</name></member>
-      <member refid="struct_tipsy_reader_1_1dark__particle_1a08b7b65380c2148be53d356438fab7f4" prot="public" virt="non-virtual"><scope>TipsyReader::dark_particle</scope><name>ID</name></member>
-      <member refid="struct_tipsy_reader_1_1dark__particle_1a4b9207514953615d6892b9114fe59444" prot="public" virt="non-virtual"><scope>TipsyReader::dark_particle</scope><name>mass</name></member>
-      <member refid="struct_tipsy_reader_1_1dark__particle_1a63afa46b9f9a18ad00f631885adabf69" prot="public" virt="non-virtual"><scope>TipsyReader::dark_particle</scope><name>phi</name></member>
-      <member refid="struct_tipsy_reader_1_1dark__particle_1a1fa66fabc8a7a537033ff059f7cf17c1" prot="public" virt="non-virtual"><scope>TipsyReader::dark_particle</scope><name>pos</name></member>
-      <member refid="struct_tipsy_reader_1_1dark__particle_1a2697460ba618a3aa4e485afdc0d41a7d" prot="public" virt="non-virtual"><scope>TipsyReader::dark_particle</scope><name>vel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/struct_tipsy_reader_1_1gas__particle.xml b/doxyxml/struct_tipsy_reader_1_1gas__particle.xml
deleted file mode 100644
index fa821ef..0000000
--- a/doxyxml/struct_tipsy_reader_1_1gas__particle.xml
+++ /dev/null
@@ -1,157 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_tipsy_reader_1_1gas__particle" kind="struct" language="C++" prot="public">
-    <compoundname>TipsyReader::gas_particle</compoundname>
-    <includes refid="tipsy_8_h" local="no">tipsy.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1gas__particle_1a8edc1bfd7be3c47e9d5c9a25a682f56e" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::gas_particle::hsmooth</definition>
-        <argsstring></argsstring>
-        <name>hsmooth</name>
-        <qualifiedname>TipsyReader::gas_particle::hsmooth</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="32" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1gas__particle_1a8da437cc8130ee49606e02ce3103527f" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::gas_particle::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>TipsyReader::gas_particle::mass</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> data. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="27" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="27" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1gas__particle_1a40504c0e094c4300a2b048ee22671d64" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::gas_particle::metals</definition>
-        <argsstring></argsstring>
-        <name>metals</name>
-        <qualifiedname>TipsyReader::gas_particle::metals</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="33" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1gas__particle_1a82608843a4e2434082dfb368040560e5" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::gas_particle::phi</definition>
-        <argsstring></argsstring>
-        <name>phi</name>
-        <qualifiedname>TipsyReader::gas_particle::phi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="34" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="34" bodyend="-1"/>
-        <referencedby refid="struct_tipsy_reader_1_1gas__particle_1a915b7fad4e97d23797f7fa93a64ab87c" compoundref="tipsy_8_h" startline="38" endline="41">ID</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1gas__particle_1a0087a5ff56836243a1755ece5fd8a9e9" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::gas_particle::pos[MAXDIM]</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>pos</name>
-        <qualifiedname>TipsyReader::gas_particle::pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="28" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="28" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1gas__particle_1ae788cf48f47a692bc247ec98c10f076f" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::gas_particle::rho</definition>
-        <argsstring></argsstring>
-        <name>rho</name>
-        <qualifiedname>TipsyReader::gas_particle::rho</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="30" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1gas__particle_1a93e74bea488fa8b4d0846a711662c7cc" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::gas_particle::temp</definition>
-        <argsstring></argsstring>
-        <name>temp</name>
-        <qualifiedname>TipsyReader::gas_particle::temp</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="31" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1gas__particle_1a481e2d4e3ddd4c62451d03ecc7655cc3" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::gas_particle::vel[MAXDIM]</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>vel</name>
-        <qualifiedname>TipsyReader::gas_particle::vel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="29" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="struct_tipsy_reader_1_1gas__particle_1a915b7fad4e97d23797f7fa93a64ab87c" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int TipsyReader::gas_particle::ID</definition>
-        <argsstring>() const</argsstring>
-        <name>ID</name>
-        <qualifiedname>TipsyReader::gas_particle::ID</qualifiedname>
-        <briefdescription>
-<para>Convert phi to index. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="38" column="9" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="38" bodyend="41"/>
-        <references refid="struct_tipsy_reader_1_1gas__particle_1a82608843a4e2434082dfb368040560e5" compoundref="tipsy_8_h" startline="34">phi</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="23" column="3" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="24" bodyend="42"/>
-    <listofallmembers>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1a8edc1bfd7be3c47e9d5c9a25a682f56e" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>hsmooth</name></member>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1a915b7fad4e97d23797f7fa93a64ab87c" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>ID</name></member>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1a8da437cc8130ee49606e02ce3103527f" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>mass</name></member>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1a40504c0e094c4300a2b048ee22671d64" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>metals</name></member>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1a82608843a4e2434082dfb368040560e5" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>phi</name></member>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1a0087a5ff56836243a1755ece5fd8a9e9" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>pos</name></member>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1ae788cf48f47a692bc247ec98c10f076f" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>rho</name></member>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1a93e74bea488fa8b4d0846a711662c7cc" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>temp</name></member>
-      <member refid="struct_tipsy_reader_1_1gas__particle_1a481e2d4e3ddd4c62451d03ecc7655cc3" prot="public" virt="non-virtual"><scope>TipsyReader::gas_particle</scope><name>vel</name></member>
-    </listofallmembers>
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-</doxygen>
diff --git a/doxyxml/struct_tipsy_reader_1_1star__particle.xml b/doxyxml/struct_tipsy_reader_1_1star__particle.xml
deleted file mode 100644
index 61b328e..0000000
--- a/doxyxml/struct_tipsy_reader_1_1star__particle.xml
+++ /dev/null
@@ -1,142 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_tipsy_reader_1_1star__particle" kind="struct" language="C++" prot="public">
-    <compoundname>TipsyReader::star_particle</compoundname>
-    <includes refid="tipsy_8_h" local="no">tipsy.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1star__particle_1af21b04d626cd1351ac62b677ee762c3b" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::star_particle::eps</definition>
-        <argsstring></argsstring>
-        <name>eps</name>
-        <qualifiedname>TipsyReader::star_particle::eps</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="71" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="71" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1star__particle_1aa8b5eaaa780570787fe4f71d83ee3fed" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::star_particle::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>TipsyReader::star_particle::mass</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_particle" kindref="compound">Particle</ref> data. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="66" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="66" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1star__particle_1afc2d178b52205d8ec50aaa3f23b4b9cf" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::star_particle::metals</definition>
-        <argsstring></argsstring>
-        <name>metals</name>
-        <qualifiedname>TipsyReader::star_particle::metals</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="69" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="69" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1star__particle_1a55abe5d54ae148c226df2c754b8b5d54" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::star_particle::phi</definition>
-        <argsstring></argsstring>
-        <name>phi</name>
-        <qualifiedname>TipsyReader::star_particle::phi</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="72" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="72" bodyend="-1"/>
-        <referencedby refid="struct_tipsy_reader_1_1star__particle_1a19ec9c380006d548220a7a0038bb1149" compoundref="tipsy_8_h" startline="76" endline="79">ID</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1star__particle_1accb22a871f58b96339b8377413e04b2c" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::star_particle::pos[MAXDIM]</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>pos</name>
-        <qualifiedname>TipsyReader::star_particle::pos</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="67" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="67" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1star__particle_1a314905c47567a7151187bacfb0fcb60a" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::star_particle::tform</definition>
-        <argsstring></argsstring>
-        <name>tform</name>
-        <qualifiedname>TipsyReader::star_particle::tform</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="70" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="70" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_tipsy_reader_1_1star__particle_1a3d7c8ef10ca7aa5c133fed4401f53264" prot="public" static="no" mutable="no">
-        <type><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref></type>
-        <definition>Real TipsyReader::star_particle::vel[MAXDIM]</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>vel</name>
-        <qualifiedname>TipsyReader::star_particle::vel</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="68" column="10" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="68" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="struct_tipsy_reader_1_1star__particle_1a19ec9c380006d548220a7a0038bb1149" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>int</type>
-        <definition>int TipsyReader::star_particle::ID</definition>
-        <argsstring>() const</argsstring>
-        <name>ID</name>
-        <qualifiedname>TipsyReader::star_particle::ID</qualifiedname>
-        <briefdescription>
-<para>Convert phi to index. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="76" column="9" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="76" bodyend="79"/>
-        <references refid="struct_tipsy_reader_1_1star__particle_1a55abe5d54ae148c226df2c754b8b5d54" compoundref="tipsy_8_h" startline="72">phi</references>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/tipsy.H" line="62" column="3" bodyfile="/home/weinberg/Projects/EXP/include/tipsy.H" bodystart="63" bodyend="80"/>
-    <listofallmembers>
-      <member refid="struct_tipsy_reader_1_1star__particle_1af21b04d626cd1351ac62b677ee762c3b" prot="public" virt="non-virtual"><scope>TipsyReader::star_particle</scope><name>eps</name></member>
-      <member refid="struct_tipsy_reader_1_1star__particle_1a19ec9c380006d548220a7a0038bb1149" prot="public" virt="non-virtual"><scope>TipsyReader::star_particle</scope><name>ID</name></member>
-      <member refid="struct_tipsy_reader_1_1star__particle_1aa8b5eaaa780570787fe4f71d83ee3fed" prot="public" virt="non-virtual"><scope>TipsyReader::star_particle</scope><name>mass</name></member>
-      <member refid="struct_tipsy_reader_1_1star__particle_1afc2d178b52205d8ec50aaa3f23b4b9cf" prot="public" virt="non-virtual"><scope>TipsyReader::star_particle</scope><name>metals</name></member>
-      <member refid="struct_tipsy_reader_1_1star__particle_1a55abe5d54ae148c226df2c754b8b5d54" prot="public" virt="non-virtual"><scope>TipsyReader::star_particle</scope><name>phi</name></member>
-      <member refid="struct_tipsy_reader_1_1star__particle_1accb22a871f58b96339b8377413e04b2c" prot="public" virt="non-virtual"><scope>TipsyReader::star_particle</scope><name>pos</name></member>
-      <member refid="struct_tipsy_reader_1_1star__particle_1a314905c47567a7151187bacfb0fcb60a" prot="public" virt="non-virtual"><scope>TipsyReader::star_particle</scope><name>tform</name></member>
-      <member refid="struct_tipsy_reader_1_1star__particle_1a3d7c8ef10ca7aa5c133fed4401f53264" prot="public" virt="non-virtual"><scope>TipsyReader::star_particle</scope><name>vel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/struct_two_d_coefs_1_1_coefs.xml b/doxyxml/struct_two_d_coefs_1_1_coefs.xml
deleted file mode 100644
index c2b8325..0000000
--- a/doxyxml/struct_two_d_coefs_1_1_coefs.xml
+++ /dev/null
@@ -1,142 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="struct_two_d_coefs_1_1_coefs" kind="struct" language="C++" prot="public">
-    <compoundname>TwoDCoefs::Coefs</compoundname>
-    <includes refid="_two_d_coefs_8_h" local="no">TwoDCoefs.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="struct_two_d_coefs_1_1_coefs_1a7fa5eee832c924f60bcbb05a8dbb4058" prot="public" static="no" mutable="no">
-        <type>Eigen::MatrixXd</type>
-        <definition>Eigen::MatrixXd TwoDCoefs::Coefs::data</definition>
-        <argsstring></argsstring>
-        <name>data</name>
-        <qualifiedname>TwoDCoefs::Coefs::data</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" line="42" column="21" bodyfile="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" bodystart="42" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_two_d_coefs_1_1_coefs_1ad04ca4e6ae4f13ae9d4a3aa62db32be2" prot="public" static="no" mutable="no">
-        <type>std::string</type>
-        <definition>std::string TwoDCoefs::Coefs::id</definition>
-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>TwoDCoefs::Coefs::id</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" line="39" column="17" bodyfile="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_two_d_coefs_1_1_coefs_1a9c6caf90c669facf7612d3727d62bb98" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TwoDCoefs::Coefs::Lmax</definition>
-        <argsstring></argsstring>
-        <name>Lmax</name>
-        <qualifiedname>TwoDCoefs::Coefs::Lmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" line="41" column="14" bodyfile="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="struct_two_d_coefs_1_1_coefs_1a98ed48a910544327a05eecd815722779" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int TwoDCoefs::Coefs::nmax</definition>
-        <argsstring></argsstring>
-        <name>nmax</name>
-        <qualifiedname>TwoDCoefs::Coefs::nmax</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" line="41" column="9" bodyfile="/home/weinberg/Projects/EXP/src/TwoDCoefs.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
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diff --git a/doxyxml/structcircular__buffer_1_1_buffer_iterator.xml b/doxyxml/structcircular__buffer_1_1_buffer_iterator.xml
deleted file mode 100644
index feb4676..0000000
--- a/doxyxml/structcircular__buffer_1_1_buffer_iterator.xml
+++ /dev/null
@@ -1,528 +0,0 @@
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deleted file mode 100644
index 7356a88..0000000
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index b77e4ce..0000000
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-        <location file="/home/weinberg/Projects/EXP/include/cxxopts.H" line="1038" column="29" bodyfile="/home/weinberg/Projects/EXP/include/cxxopts.H" bodystart="1038" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/cxxopts.H" line="1036" column="5" bodyfile="/home/weinberg/Projects/EXP/include/cxxopts.H" bodystart="1037" bodyend="1039"/>
-    <listofallmembers>
-      <member refid="structcxxopts_1_1values_1_1type__is__container_3_01std_1_1vector_3_01_t_01_4_01_4_1a696f25c27190618461fa842bfe8adfb7" prot="public" virt="non-virtual"><scope>cxxopts::values::type_is_container&lt; std::vector&lt; T &gt; &gt;</scope><name>value</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/structdark__particle.xml b/doxyxml/structdark__particle.xml
deleted file mode 100644
index 6ca5936..0000000
--- a/doxyxml/structdark__particle.xml
+++ /dev/null
@@ -1,97 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structdark__particle" kind="struct" language="C++" prot="public">
-    <compoundname>dark_particle</compoundname>
-    <includes refid="src_2tipsydefs_8h" local="no">tipsydefs.h</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structdark__particle_1acf616c8d2a03b5c00a1e32c259e47381" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real dark_particle::eps</definition>
-        <argsstring></argsstring>
-        <name>eps</name>
-        <qualifiedname>dark_particle::eps</qualifiedname>
-        <briefdescription>
-<para>Smoothing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="39" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="39" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdark__particle_1ac92bfe5d859987ff69aefcb931a91292" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real dark_particle::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>dark_particle::mass</qualifiedname>
-        <briefdescription>
-<para>Mass. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="33" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="33" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdark__particle_1a842f32d0aad6d801e54089553c00c5cd" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real dark_particle::phi</definition>
-        <argsstring></argsstring>
-        <name>phi</name>
-        <qualifiedname>dark_particle::phi</qualifiedname>
-        <briefdescription>
-<para>Gravitational potential. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="41" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdark__particle_1af86e9870ea96dbc5963326015d8ede71" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real dark_particle::pos</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>pos</name>
-        <qualifiedname>dark_particle::pos</qualifiedname>
-        <briefdescription>
-<para>Position vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="35" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdark__particle_1a1b8a9ab2e8676f493a35a62eed79c4fe" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real dark_particle::vel</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>vel</name>
-        <qualifiedname>dark_particle::vel</qualifiedname>
-        <briefdescription>
-<para>Velocity vector. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="37" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="37" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Tipsy particle structure for a dark particle. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="31" column="1" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="31" bodyend="42"/>
-    <listofallmembers>
-      <member refid="structdark__particle_1acf616c8d2a03b5c00a1e32c259e47381" prot="public" virt="non-virtual"><scope>dark_particle</scope><name>eps</name></member>
-      <member refid="structdark__particle_1ac92bfe5d859987ff69aefcb931a91292" prot="public" virt="non-virtual"><scope>dark_particle</scope><name>mass</name></member>
-      <member refid="structdark__particle_1a842f32d0aad6d801e54089553c00c5cd" prot="public" virt="non-virtual"><scope>dark_particle</scope><name>phi</name></member>
-      <member refid="structdark__particle_1af86e9870ea96dbc5963326015d8ede71" prot="public" virt="non-virtual"><scope>dark_particle</scope><name>pos</name></member>
-      <member refid="structdark__particle_1a1b8a9ab2e8676f493a35a62eed79c4fe" prot="public" virt="non-virtual"><scope>dark_particle</scope><name>vel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/structdump.xml b/doxyxml/structdump.xml
deleted file mode 100644
index 09db28f..0000000
--- a/doxyxml/structdump.xml
+++ /dev/null
@@ -1,113 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structdump" kind="struct" language="C++" prot="public">
-    <compoundname>dump</compoundname>
-    <includes refid="src_2tipsydefs_8h" local="no">tipsydefs.h</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structdump_1ac8164fc60f6f329a9cd7f0b44cc9746c" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int dump::nbodies</definition>
-        <argsstring></argsstring>
-        <name>nbodies</name>
-        <qualifiedname>dump::nbodies</qualifiedname>
-        <briefdescription>
-<para>Total number of bodies. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="73" column="9" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="73" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdump_1a82c00b82a3a31c80d92e5b33d4297293" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int dump::ndark</definition>
-        <argsstring></argsstring>
-        <name>ndark</name>
-        <qualifiedname>dump::ndark</qualifiedname>
-        <briefdescription>
-<para>Number of Dark particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="82" column="9" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="82" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdump_1aa48f8ee27856137e78832c1faa682332" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int dump::ndim</definition>
-        <argsstring></argsstring>
-        <name>ndim</name>
-        <qualifiedname>dump::ndim</qualifiedname>
-        <briefdescription>
-<para>Dimensions. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="76" column="9" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="76" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdump_1ab438c1d3692a22a692da61004263404e" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int dump::nsph</definition>
-        <argsstring></argsstring>
-        <name>nsph</name>
-        <qualifiedname>dump::nsph</qualifiedname>
-        <briefdescription>
-<para>Number of Gas particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="79" column="9" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="79" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdump_1adecbc996a89feae2cd3a418d8692bea2" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int dump::nstar</definition>
-        <argsstring></argsstring>
-        <name>nstar</name>
-        <qualifiedname>dump::nstar</qualifiedname>
-        <briefdescription>
-<para>Number of Star particles. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="85" column="9" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="85" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structdump_1a2e2b1a1dcb6bd2693a3b0535f11cacaf" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double dump::time</definition>
-        <argsstring></argsstring>
-        <name>time</name>
-        <qualifiedname>dump::time</qualifiedname>
-        <briefdescription>
-<para>Dump time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="70" column="12" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="70" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Tipsy file header. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="68" column="1" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="68" bodyend="86"/>
-    <listofallmembers>
-      <member refid="structdump_1ac8164fc60f6f329a9cd7f0b44cc9746c" prot="public" virt="non-virtual"><scope>dump</scope><name>nbodies</name></member>
-      <member refid="structdump_1a82c00b82a3a31c80d92e5b33d4297293" prot="public" virt="non-virtual"><scope>dump</scope><name>ndark</name></member>
-      <member refid="structdump_1aa48f8ee27856137e78832c1faa682332" prot="public" virt="non-virtual"><scope>dump</scope><name>ndim</name></member>
-      <member refid="structdump_1ab438c1d3692a22a692da61004263404e" prot="public" virt="non-virtual"><scope>dump</scope><name>nsph</name></member>
-      <member refid="structdump_1adecbc996a89feae2cd3a418d8692bea2" prot="public" virt="non-virtual"><scope>dump</scope><name>nstar</name></member>
-      <member refid="structdump_1a2e2b1a1dcb6bd2693a3b0535f11cacaf" prot="public" virt="non-virtual"><scope>dump</scope><name>time</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/structgadget__header.xml b/doxyxml/structgadget__header.xml
deleted file mode 100644
index 9cbd20f..0000000
--- a/doxyxml/structgadget__header.xml
+++ /dev/null
@@ -1,287 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structgadget__header" kind="struct" language="C++" prot="public">
-    <compoundname>gadget_header</compoundname>
-    <includes refid="gadget_8_h" local="no">gadget.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structgadget__header_1aa904adb379b27c06fc564f51286ce9fd" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double gadget_header::BoxSize</definition>
-        <argsstring></argsstring>
-        <name>BoxSize</name>
-        <qualifiedname>gadget_header::BoxSize</qualifiedname>
-        <briefdescription>
-<para>box-size of simulation in case periodic boundaries were used </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="38" column="10" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="38" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a0cb7c9e559540139103d39fd88168ac6" prot="public" static="no" mutable="no">
-        <type>char</type>
-        <definition>char gadget_header::fill[64]</definition>
-        <argsstring>[64]</argsstring>
-        <name>fill</name>
-        <qualifiedname>gadget_header::fill</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="58" column="8" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="58" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a76eba6921f593d0ff0b1ff2cdc180f18" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int gadget_header::flag_cooling</definition>
-        <argsstring></argsstring>
-        <name>flag_cooling</name>
-        <qualifiedname>gadget_header::flag_cooling</qualifiedname>
-        <briefdescription>
-<para>flags whether cooling was included </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="32" column="7" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a77b8a2ce5f7d08e150c1a3f8d59a1f57" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int gadget_header::flag_feedback</definition>
-        <argsstring></argsstring>
-        <name>flag_feedback</name>
-        <qualifiedname>gadget_header::flag_feedback</qualifiedname>
-        <briefdescription>
-<para>flags whether feedback was included (obsolete) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="24" column="7" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="24" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1ae58c6fec66974ee4d26c740b29705f69" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int gadget_header::flag_metals</definition>
-        <argsstring></argsstring>
-        <name>flag_metals</name>
-        <qualifiedname>gadget_header::flag_metals</qualifiedname>
-        <briefdescription>
-<para>flags whether the file contains metallicity values for gas and star particles </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="53" column="7" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="53" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1aa55c35cc5fe18f715d2c903ccef19e7d" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int gadget_header::flag_sfr</definition>
-        <argsstring></argsstring>
-        <name>flag_sfr</name>
-        <qualifiedname>gadget_header::flag_sfr</qualifiedname>
-        <briefdescription>
-<para>flags whether the simulation was including star formation *<zwj/>/ </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="21" column="7" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="21" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a79fa1c3f82d65d6880776cbc66783844" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int gadget_header::flag_stellarage</definition>
-        <argsstring></argsstring>
-        <name>flag_stellarage</name>
-        <qualifiedname>gadget_header::flag_stellarage</qualifiedname>
-        <briefdescription>
-<para>flags whether the file contains formation times of star particles </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="50" column="7" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="50" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1accf78f7e90e1f1de1cef2ad4562cfa33" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double gadget_header::HubbleParam</definition>
-        <argsstring></argsstring>
-        <name>HubbleParam</name>
-        <qualifiedname>gadget_header::HubbleParam</qualifiedname>
-        <briefdescription>
-<para>Hubble parameter in units of 100 km/sec/Mpc. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="47" column="10" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="47" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1aa85bd94119c60529efb41d55b699973c" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double gadget_header::mass[6]</definition>
-        <argsstring>[6]</argsstring>
-        <name>mass</name>
-        <qualifiedname>gadget_header::mass</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>mass of particles of each type. If 0, then the masses are explicitly stored in the mass-block of the snapshot file, otherwise they are omitted </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="12" column="10" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="12" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a882f8673fa4f20ebd20ee47e6e04a0dc" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int gadget_header::npart[6]</definition>
-        <argsstring>[6]</argsstring>
-        <name>npart</name>
-        <qualifiedname>gadget_header::npart</qualifiedname>
-        <briefdescription>
-<para>number of particles of each type in this file </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="7" column="7" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="7" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1aef8446f0d7c44580678669ecce2adb75" prot="public" static="no" mutable="no">
-        <type>unsigned int</type>
-        <definition>unsigned int gadget_header::npartTotal[6]</definition>
-        <argsstring>[6]</argsstring>
-        <name>npartTotal</name>
-        <qualifiedname>gadget_header::npartTotal</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-<para>total number of particles of each type in this snapshot. This can be different from npart if one is dealing with a multi-file snapshot. </para>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="29" column="16" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="29" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a8294633293d1460a2d0fa4b54b8fc504" prot="public" static="no" mutable="no">
-        <type>unsigned int</type>
-        <definition>unsigned int gadget_header::npartTotalHighWord[6]</definition>
-        <argsstring>[6]</argsstring>
-        <name>npartTotalHighWord</name>
-        <qualifiedname>gadget_header::npartTotalHighWord</qualifiedname>
-        <briefdescription>
-<para>High word of the total number of particles of each type. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="56" column="16" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="56" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a7331bbb02695870639bcd2b9a56207ec" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int gadget_header::num_files</definition>
-        <argsstring></argsstring>
-        <name>num_files</name>
-        <qualifiedname>gadget_header::num_files</qualifiedname>
-        <briefdescription>
-<para>number of files in multi-file snapshot </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="35" column="7" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="35" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1ace7ff5bfdafd4a3b4ad619b5dac3c6f3" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double gadget_header::Omega0</definition>
-        <argsstring></argsstring>
-        <name>Omega0</name>
-        <qualifiedname>gadget_header::Omega0</qualifiedname>
-        <briefdescription>
-<para>matter density in units of critical density </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="41" column="10" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="41" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a05c79c5b1feb123b9a7d9d8bac500db2" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double gadget_header::OmegaLambda</definition>
-        <argsstring></argsstring>
-        <name>OmegaLambda</name>
-        <qualifiedname>gadget_header::OmegaLambda</qualifiedname>
-        <briefdescription>
-<para>cosmological constant parameter </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="44" column="10" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="44" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1ad624d25cb5a43ef1893927048e75c8ed" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double gadget_header::redshift</definition>
-        <argsstring></argsstring>
-        <name>redshift</name>
-        <qualifiedname>gadget_header::redshift</qualifiedname>
-        <briefdescription>
-<para>redshift of snapshot file *<zwj/>/ </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="18" column="10" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="18" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgadget__header_1a8d283437bd9adc7b406c3516506be6d2" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double gadget_header::time</definition>
-        <argsstring></argsstring>
-        <name>time</name>
-        <qualifiedname>gadget_header::time</qualifiedname>
-        <briefdescription>
-<para>time of snapshot file </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="15" column="10" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="15" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/gadget.H" line="4" column="1" bodyfile="/home/weinberg/Projects/EXP/include/gadget.H" bodystart="5" bodyend="59"/>
-    <listofallmembers>
-      <member refid="structgadget__header_1aa904adb379b27c06fc564f51286ce9fd" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>BoxSize</name></member>
-      <member refid="structgadget__header_1a0cb7c9e559540139103d39fd88168ac6" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>fill</name></member>
-      <member refid="structgadget__header_1a76eba6921f593d0ff0b1ff2cdc180f18" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>flag_cooling</name></member>
-      <member refid="structgadget__header_1a77b8a2ce5f7d08e150c1a3f8d59a1f57" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>flag_feedback</name></member>
-      <member refid="structgadget__header_1ae58c6fec66974ee4d26c740b29705f69" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>flag_metals</name></member>
-      <member refid="structgadget__header_1aa55c35cc5fe18f715d2c903ccef19e7d" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>flag_sfr</name></member>
-      <member refid="structgadget__header_1a79fa1c3f82d65d6880776cbc66783844" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>flag_stellarage</name></member>
-      <member refid="structgadget__header_1accf78f7e90e1f1de1cef2ad4562cfa33" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>HubbleParam</name></member>
-      <member refid="structgadget__header_1aa85bd94119c60529efb41d55b699973c" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>mass</name></member>
-      <member refid="structgadget__header_1a882f8673fa4f20ebd20ee47e6e04a0dc" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>npart</name></member>
-      <member refid="structgadget__header_1aef8446f0d7c44580678669ecce2adb75" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>npartTotal</name></member>
-      <member refid="structgadget__header_1a8294633293d1460a2d0fa4b54b8fc504" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>npartTotalHighWord</name></member>
-      <member refid="structgadget__header_1a7331bbb02695870639bcd2b9a56207ec" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>num_files</name></member>
-      <member refid="structgadget__header_1ace7ff5bfdafd4a3b4ad619b5dac3c6f3" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>Omega0</name></member>
-      <member refid="structgadget__header_1a05c79c5b1feb123b9a7d9d8bac500db2" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>OmegaLambda</name></member>
-      <member refid="structgadget__header_1ad624d25cb5a43ef1893927048e75c8ed" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>redshift</name></member>
-      <member refid="structgadget__header_1a8d283437bd9adc7b406c3516506be6d2" prot="public" virt="non-virtual"><scope>gadget_header</scope><name>time</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/structgas__particle.xml b/doxyxml/structgas__particle.xml
deleted file mode 100644
index f0be4ee..0000000
--- a/doxyxml/structgas__particle.xml
+++ /dev/null
@@ -1,145 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structgas__particle" kind="struct" language="C++" prot="public">
-    <compoundname>gas_particle</compoundname>
-    <includes refid="src_2tipsydefs_8h" local="no">tipsydefs.h</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structgas__particle_1acc794ce36a1ce0a65a932f2a6cce64c5" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real gas_particle::hsmooth</definition>
-        <argsstring></argsstring>
-        <name>hsmooth</name>
-        <qualifiedname>gas_particle::hsmooth</qualifiedname>
-        <briefdescription>
-<para>Smoothing scale. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="21" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="21" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgas__particle_1a832d4c193125b69735c91c1f8c9ceda6" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real gas_particle::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>gas_particle::mass</qualifiedname>
-        <briefdescription>
-<para>particle mass </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="11" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="11" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgas__particle_1a1c9edd52d57e0ec00c310cba865bd48b" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real gas_particle::metals</definition>
-        <argsstring></argsstring>
-        <name>metals</name>
-        <qualifiedname>gas_particle::metals</qualifiedname>
-        <briefdescription>
-<para>Metal value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="23" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="23" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgas__particle_1ad8b7917fafa6a13a6c2e820e355e4fc1" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real gas_particle::phi</definition>
-        <argsstring></argsstring>
-        <name>phi</name>
-        <qualifiedname>gas_particle::phi</qualifiedname>
-        <briefdescription>
-<para>Gravitational potential. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="25" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="25" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgas__particle_1ae862ed85db09f8a8758224f3cd13f20a" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real gas_particle::pos</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>pos</name>
-        <qualifiedname>gas_particle::pos</qualifiedname>
-        <briefdescription>
-<para>particle position vector </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="13" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="13" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgas__particle_1ac79cc13a1db1d179dea87528d49ac82b" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real gas_particle::rho</definition>
-        <argsstring></argsstring>
-        <name>rho</name>
-        <qualifiedname>gas_particle::rho</qualifiedname>
-        <briefdescription>
-<para>Density. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="17" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="17" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgas__particle_1a99ec989e41d9ec439b65294f7f600def" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real gas_particle::temp</definition>
-        <argsstring></argsstring>
-        <name>temp</name>
-        <qualifiedname>gas_particle::temp</qualifiedname>
-        <briefdescription>
-<para>Temperature. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="19" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="19" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structgas__particle_1a192b9ed2e2f0346523c28e17ec5a7115" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real gas_particle::vel</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>vel</name>
-        <qualifiedname>gas_particle::vel</qualifiedname>
-        <briefdescription>
-<para>particle velociy vector </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="15" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="15" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Tipsy particle structure for a gas particle. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="9" column="1" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="9" bodyend="26"/>
-    <listofallmembers>
-      <member refid="structgas__particle_1acc794ce36a1ce0a65a932f2a6cce64c5" prot="public" virt="non-virtual"><scope>gas_particle</scope><name>hsmooth</name></member>
-      <member refid="structgas__particle_1a832d4c193125b69735c91c1f8c9ceda6" prot="public" virt="non-virtual"><scope>gas_particle</scope><name>mass</name></member>
-      <member refid="structgas__particle_1a1c9edd52d57e0ec00c310cba865bd48b" prot="public" virt="non-virtual"><scope>gas_particle</scope><name>metals</name></member>
-      <member refid="structgas__particle_1ad8b7917fafa6a13a6c2e820e355e4fc1" prot="public" virt="non-virtual"><scope>gas_particle</scope><name>phi</name></member>
-      <member refid="structgas__particle_1ae862ed85db09f8a8758224f3cd13f20a" prot="public" virt="non-virtual"><scope>gas_particle</scope><name>pos</name></member>
-      <member refid="structgas__particle_1ac79cc13a1db1d179dea87528d49ac82b" prot="public" virt="non-virtual"><scope>gas_particle</scope><name>rho</name></member>
-      <member refid="structgas__particle_1a99ec989e41d9ec439b65294f7f600def" prot="public" virt="non-virtual"><scope>gas_particle</scope><name>temp</name></member>
-      <member refid="structgas__particle_1a192b9ed2e2f0346523c28e17ec5a7115" prot="public" virt="non-virtual"><scope>gas_particle</scope><name>vel</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/structkdtree_1_1node.xml b/doxyxml/structkdtree_1_1node.xml
deleted file mode 100644
index 6b658c4..0000000
--- a/doxyxml/structkdtree_1_1node.xml
+++ /dev/null
@@ -1,148 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structkdtree_1_1node" kind="struct" language="C++" prot="private">
-    <compoundname>kdtree::node</compoundname>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structkdtree_1_1node_1a7568fecffbfa6341bc93910fe5f47d71" prot="public" static="no" mutable="no">
-        <type><ref refid="structkdtree_1_1node" kindref="compound">node</ref> *</type>
-        <definition>node* kdtree&lt; coordinate_type, dimensions &gt;::node::left_</definition>
-        <argsstring></argsstring>
-        <name>left_</name>
-        <qualifiedname>kdtree::node::left_</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="185" column="10" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="185" bodyend="-1"/>
-        <referencedby refid="classkdtree_1abc92f4a3965e484862bc5b8c2e96e3a6" compoundref="_k_dtree_8_h" startline="220" endline="241">kdtree&lt; coordinate_type, dimensions &gt;::nearestN</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="structkdtree_1_1node_1af92e2b3cebf01d832da26e995d3be7c9" prot="public" static="no" mutable="no">
-        <type><ref refid="classkdtree_1a65952573e13fbddf5da4dd6468cf0d56" kindref="member">point_type</ref></type>
-        <definition>point_type kdtree&lt; coordinate_type, dimensions &gt;::node::point_</definition>
-        <argsstring></argsstring>
-        <name>point_</name>
-        <qualifiedname>kdtree::node::point_</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="184" column="16" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="184" bodyend="-1"/>
-        <referencedby refid="structkdtree_1_1node_1ace33495c2e0c094b3335b84c929d0af9" compoundref="_k_dtree_8_h" startline="180" endline="183">kdtree&lt; coordinate_type, dimensions &gt;::node::distance</referencedby>
-        <referencedby refid="structkdtree_1_1node_1a7b27330dc074cbdba7811f7c01e59f55" compoundref="_k_dtree_8_h" startline="175" endline="178">kdtree&lt; coordinate_type, dimensions &gt;::node::get</referencedby>
-        <referencedby refid="structkdtree_1_1node__cmp_1abd166d70d778298c793fa1af33cef2be" compoundref="_k_dtree_8_h" startline="202" endline="205">kdtree&lt; coordinate_type, dimensions &gt;::node_cmp::operator()</referencedby>
-      </memberdef>
-      <memberdef kind="variable" id="structkdtree_1_1node_1a3194e5a72c284c67f2dc66b323f13bf4" prot="public" static="no" mutable="no">
-        <type><ref refid="structkdtree_1_1node" kindref="compound">node</ref> *</type>
-        <definition>node* kdtree&lt; coordinate_type, dimensions &gt;::node::right_</definition>
-        <argsstring></argsstring>
-        <name>right_</name>
-        <qualifiedname>kdtree::node::right_</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="186" column="10" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="186" bodyend="-1"/>
-        <referencedby refid="classkdtree_1abc92f4a3965e484862bc5b8c2e96e3a6" compoundref="_k_dtree_8_h" startline="220" endline="241">kdtree&lt; coordinate_type, dimensions &gt;::nearestN</referencedby>
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-        <type>double</type>
-        <definition>double kdtree&lt; coordinate_type, dimensions &gt;::node::distance</definition>
-        <argsstring>(const point_type &amp;pt) const</argsstring>
-        <name>distance</name>
-        <qualifiedname>kdtree::node::distance</qualifiedname>
-        <param>
-          <type>const <ref refid="classkdtree_1a65952573e13fbddf5da4dd6468cf0d56" kindref="member">point_type</ref> &amp;</type>
-          <declname>pt</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
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-        <references refid="classpoint_1a42a090ade88ea5811f0f5a5b9071affb" compoundref="_k_dtree_8_h" startline="101" endline="110">point&lt; coordinate_type, dimensions &gt;::distance</references>
-        <references refid="structkdtree_1_1node_1af92e2b3cebf01d832da26e995d3be7c9" compoundref="_k_dtree_8_h" startline="184">kdtree&lt; coordinate_type, dimensions &gt;::node::point_</references>
-        <referencedby refid="classkdtree_1abc92f4a3965e484862bc5b8c2e96e3a6" compoundref="_k_dtree_8_h" startline="220" endline="241">kdtree&lt; coordinate_type, dimensions &gt;::nearestN</referencedby>
-      </memberdef>
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-        <type>coordinate_type</type>
-        <definition>coordinate_type kdtree&lt; coordinate_type, dimensions &gt;::node::get</definition>
-        <argsstring>(size_t index) const</argsstring>
-        <name>get</name>
-        <qualifiedname>kdtree::node::get</qualifiedname>
-        <param>
-          <type>size_t</type>
-          <declname>index</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="175" column="21" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="175" bodyend="178"/>
-        <references refid="classpoint_1ad627b50ee8e9fcfc20f24323aa4ab88d" compoundref="_k_dtree_8_h" startline="84" endline="87">point&lt; coordinate_type, dimensions &gt;::get</references>
-        <references refid="structkdtree_1_1node_1af92e2b3cebf01d832da26e995d3be7c9" compoundref="_k_dtree_8_h" startline="184">kdtree&lt; coordinate_type, dimensions &gt;::node::point_</references>
-        <referencedby refid="classkdtree_1abc92f4a3965e484862bc5b8c2e96e3a6" compoundref="_k_dtree_8_h" startline="220" endline="241">kdtree&lt; coordinate_type, dimensions &gt;::nearestN</referencedby>
-      </memberdef>
-      <memberdef kind="function" id="structkdtree_1_1node_1a01fb03948f51fe16c8dc80b47dac2c2e" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>kdtree&lt; coordinate_type, dimensions &gt;::node::node</definition>
-        <argsstring>(const point_type &amp;pt)</argsstring>
-        <name>node</name>
-        <qualifiedname>kdtree::node::node</qualifiedname>
-        <param>
-          <type>const <ref refid="classkdtree_1a65952573e13fbddf5da4dd6468cf0d56" kindref="member">point_type</ref> &amp;</type>
-          <declname>pt</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="171" column="5" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="171" bodyend="173"/>
-      </memberdef>
-    </sectiondef>
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-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <collaborationgraph>
-      <node id="2">
-        <label>kdtree&lt; coordinate_type, dimensions &gt;::node</label>
-        <link refid="structkdtree_1_1node"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>left_</edgelabel>
-          <edgelabel>right_</edgelabel>
-        </childnode>
-      </node>
-      <node id="1">
-        <label>kdtree&lt; coordinate_type, dimensions &gt;::node</label>
-        <link refid="structkdtree_1_1node"/>
-        <childnode refid="2" relation="usage">
-          <edgelabel>left_</edgelabel>
-          <edgelabel>right_</edgelabel>
-        </childnode>
-      </node>
-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="169" column="3" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="170" bodyend="187"/>
-    <listofallmembers>
-      <member refid="structkdtree_1_1node_1ace33495c2e0c094b3335b84c929d0af9" prot="public" virt="non-virtual"><scope>kdtree::node</scope><name>distance</name></member>
-      <member refid="structkdtree_1_1node_1a7b27330dc074cbdba7811f7c01e59f55" prot="public" virt="non-virtual"><scope>kdtree::node</scope><name>get</name></member>
-      <member refid="structkdtree_1_1node_1a7568fecffbfa6341bc93910fe5f47d71" prot="public" virt="non-virtual"><scope>kdtree::node</scope><name>left_</name></member>
-      <member refid="structkdtree_1_1node_1a01fb03948f51fe16c8dc80b47dac2c2e" prot="public" virt="non-virtual"><scope>kdtree::node</scope><name>node</name></member>
-      <member refid="structkdtree_1_1node_1af92e2b3cebf01d832da26e995d3be7c9" prot="public" virt="non-virtual"><scope>kdtree::node</scope><name>point_</name></member>
-      <member refid="structkdtree_1_1node_1a3194e5a72c284c67f2dc66b323f13bf4" prot="public" virt="non-virtual"><scope>kdtree::node</scope><name>right_</name></member>
-    </listofallmembers>
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-</doxygen>
diff --git a/doxyxml/structkdtree_1_1node__cmp.xml b/doxyxml/structkdtree_1_1node__cmp.xml
deleted file mode 100644
index 7217943..0000000
--- a/doxyxml/structkdtree_1_1node__cmp.xml
+++ /dev/null
@@ -1,78 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structkdtree_1_1node__cmp" kind="struct" language="C++" prot="private">
-    <compoundname>kdtree::node_cmp</compoundname>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structkdtree_1_1node__cmp_1a1185b87729d504fb512d10aca62e30a4" prot="public" static="no" mutable="no">
-        <type>size_t</type>
-        <definition>size_t kdtree&lt; coordinate_type, dimensions &gt;::node_cmp::index_</definition>
-        <argsstring></argsstring>
-        <name>index_</name>
-        <qualifiedname>kdtree::node_cmp::index_</qualifiedname>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="206" column="12" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="206" bodyend="-1"/>
-        <referencedby refid="structkdtree_1_1node__cmp_1abd166d70d778298c793fa1af33cef2be" compoundref="_k_dtree_8_h" startline="202" endline="205">kdtree&lt; coordinate_type, dimensions &gt;::node_cmp::operator()</referencedby>
-      </memberdef>
-    </sectiondef>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="structkdtree_1_1node__cmp_1ae996c25376282fa4463c2421b61c4494" prot="public" static="no" const="no" explicit="no" inline="yes" virt="non-virtual">
-        <type></type>
-        <definition>kdtree&lt; coordinate_type, dimensions &gt;::node_cmp::node_cmp</definition>
-        <argsstring>(size_t index)</argsstring>
-        <name>node_cmp</name>
-        <qualifiedname>kdtree::node_cmp::node_cmp</qualifiedname>
-        <param>
-          <type>size_t</type>
-          <declname>index</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="198" column="5" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="198" bodyend="200"/>
-      </memberdef>
-      <memberdef kind="function" id="structkdtree_1_1node__cmp_1abd166d70d778298c793fa1af33cef2be" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool kdtree&lt; coordinate_type, dimensions &gt;::node_cmp::operator()</definition>
-        <argsstring>(const node &amp;n1, const node &amp;n2) const</argsstring>
-        <name>operator()</name>
-        <qualifiedname>kdtree::node_cmp::operator()</qualifiedname>
-        <param>
-          <type>const <ref refid="structkdtree_1_1node" kindref="compound">node</ref> &amp;</type>
-          <declname>n1</declname>
-        </param>
-        <param>
-          <type>const <ref refid="structkdtree_1_1node" kindref="compound">node</ref> &amp;</type>
-          <declname>n2</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="202" column="10" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="202" bodyend="205"/>
-        <references refid="classpoint_1ad627b50ee8e9fcfc20f24323aa4ab88d" compoundref="_k_dtree_8_h" startline="84" endline="87">point&lt; coordinate_type, dimensions &gt;::get</references>
-        <references refid="structkdtree_1_1node__cmp_1a1185b87729d504fb512d10aca62e30a4" compoundref="_k_dtree_8_h" startline="206">kdtree&lt; coordinate_type, dimensions &gt;::node_cmp::index_</references>
-        <references refid="structkdtree_1_1node_1af92e2b3cebf01d832da26e995d3be7c9" compoundref="_k_dtree_8_h" startline="184">kdtree&lt; coordinate_type, dimensions &gt;::node::point_</references>
-      </memberdef>
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-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/include/KDtree.H" line="196" column="3" bodyfile="/home/weinberg/Projects/EXP/include/KDtree.H" bodystart="197" bodyend="207"/>
-    <listofallmembers>
-      <member refid="structkdtree_1_1node__cmp_1a1185b87729d504fb512d10aca62e30a4" prot="public" virt="non-virtual"><scope>kdtree::node_cmp</scope><name>index_</name></member>
-      <member refid="structkdtree_1_1node__cmp_1ae996c25376282fa4463c2421b61c4494" prot="public" virt="non-virtual"><scope>kdtree::node_cmp</scope><name>node_cmp</name></member>
-      <member refid="structkdtree_1_1node__cmp_1abd166d70d778298c793fa1af33cef2be" prot="public" virt="non-virtual"><scope>kdtree::node_cmp</scope><name>operator()</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/structloadb__datum.xml b/doxyxml/structloadb__datum.xml
deleted file mode 100644
index 69288ea..0000000
--- a/doxyxml/structloadb__datum.xml
+++ /dev/null
@@ -1,65 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structloadb__datum" kind="struct" language="C++" prot="public">
-    <compoundname>loadb_datum</compoundname>
-    <includes refid="_component_8_h" local="no">Component.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structloadb__datum_1a019e05e8ba0af95ae1c1e1851fbb0ab6" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int loadb_datum::indx</definition>
-        <argsstring></argsstring>
-        <name>indx</name>
-        <qualifiedname>loadb_datum::indx</qualifiedname>
-        <briefdescription>
-<para>Process ID. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="31" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="31" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structloadb__datum_1a91f9d9eb2ccabf27f0500678b7e66284" prot="public" static="no" mutable="no">
-        <type>unsigned short</type>
-        <definition>unsigned short loadb_datum::s</definition>
-        <argsstring></argsstring>
-        <name>s</name>
-        <qualifiedname>loadb_datum::s</qualifiedname>
-        <briefdescription>
-<para>0--&gt;Old partiion, 1--&gt;New partiion </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="32" column="18" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="32" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structloadb__datum_1aa845db9c23c38144b9d456e9d6a75e35" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int loadb_datum::top</definition>
-        <argsstring></argsstring>
-        <name>top</name>
-        <qualifiedname>loadb_datum::top</qualifiedname>
-        <briefdescription>
-<para>Top particle index for this process. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Component.H" line="30" column="7" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="30" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Structure used to sort old &amp; new indices for load balancing. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/Component.H" line="28" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Component.H" bodystart="29" bodyend="33"/>
-    <listofallmembers>
-      <member refid="structloadb__datum_1a019e05e8ba0af95ae1c1e1851fbb0ab6" prot="public" virt="non-virtual"><scope>loadb_datum</scope><name>indx</name></member>
-      <member refid="structloadb__datum_1a91f9d9eb2ccabf27f0500678b7e66284" prot="public" virt="non-virtual"><scope>loadb_datum</scope><name>s</name></member>
-      <member refid="structloadb__datum_1aa845db9c23c38144b9d456e9d6a75e35" prot="public" virt="non-virtual"><scope>loadb_datum</scope><name>top</name></member>
-    </listofallmembers>
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diff --git a/doxyxml/structlt_e_l3.xml b/doxyxml/structlt_e_l3.xml
deleted file mode 100644
index 13dbcd0..0000000
--- a/doxyxml/structlt_e_l3.xml
+++ /dev/null
@@ -1,41 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structlt_e_l3" kind="struct" language="C++" prot="public">
-    <compoundname>ltEL3</compoundname>
-    <includes refid="_orient_8_h" local="no">Orient.H</includes>
-    <sectiondef kind="public-func">
-      <memberdef kind="function" id="structlt_e_l3_1ae32d2b2eb0c63069c1182038873e0ec5" prot="public" static="no" const="yes" explicit="no" inline="yes" virt="non-virtual">
-        <type>bool</type>
-        <definition>bool ltEL3::operator()</definition>
-        <argsstring>(const EL3 &amp;s1, const EL3 &amp;s2) const</argsstring>
-        <name>operator()</name>
-        <qualifiedname>ltEL3::operator()</qualifiedname>
-        <param>
-          <type>const <ref refid="class_e_l3" kindref="compound">EL3</ref> &amp;</type>
-          <declname>s1</declname>
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-        <param>
-          <type>const <ref refid="class_e_l3" kindref="compound">EL3</ref> &amp;</type>
-          <declname>s2</declname>
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-        <briefdescription>
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-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="52" column="8" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="52" bodyend="55"/>
-        <references refid="class_e_l3_1a9e40210ff6ff599e9b9706ec3cfd8a58" compoundref="_orient_8_h" startline="29">EL3::E</references>
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-    </briefdescription>
-    <detaileddescription>
-<para>Comparsion function for set&lt;&gt; </para>
-    </detaileddescription>
-    <location file="/home/weinberg/Projects/EXP/src/Orient.H" line="50" column="1" bodyfile="/home/weinberg/Projects/EXP/src/Orient.H" bodystart="51" bodyend="56"/>
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-      <member refid="structlt_e_l3_1ae32d2b2eb0c63069c1182038873e0ec5" prot="public" virt="non-virtual"><scope>ltEL3</scope><name>operator()</name></member>
-    </listofallmembers>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/structstar__particle.xml b/doxyxml/structstar__particle.xml
deleted file mode 100644
index a216435..0000000
--- a/doxyxml/structstar__particle.xml
+++ /dev/null
@@ -1,129 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structstar__particle" kind="struct" language="C++" prot="public">
-    <compoundname>star_particle</compoundname>
-    <includes refid="src_2tipsydefs_8h" local="no">tipsydefs.h</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structstar__particle_1ac02db9fda2617382a8999bab6f0a0479" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real star_particle::eps</definition>
-        <argsstring></argsstring>
-        <name>eps</name>
-        <qualifiedname>star_particle::eps</qualifiedname>
-        <briefdescription>
-<para>Smoothing. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="59" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="59" bodyend="-1"/>
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-        <definition>Real star_particle::mass</definition>
-        <argsstring></argsstring>
-        <name>mass</name>
-        <qualifiedname>star_particle::mass</qualifiedname>
-        <briefdescription>
-<para>particle mass </para>
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-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="49" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="49" bodyend="-1"/>
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-        <definition>Real star_particle::metals</definition>
-        <argsstring></argsstring>
-        <name>metals</name>
-        <qualifiedname>star_particle::metals</qualifiedname>
-        <briefdescription>
-<para>Metallicty value. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="55" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="55" bodyend="-1"/>
-      </memberdef>
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-        <definition>Real star_particle::phi</definition>
-        <argsstring></argsstring>
-        <name>phi</name>
-        <qualifiedname>star_particle::phi</qualifiedname>
-        <briefdescription>
-<para>Gravitational potential. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="61" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="61" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structstar__particle_1a232e40d334a0fa00967a1ed92aa4493d" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real star_particle::pos</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>pos</name>
-        <qualifiedname>star_particle::pos</qualifiedname>
-        <briefdescription>
-<para>particle position vector </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="51" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="51" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structstar__particle_1a33fbc674592133b01b56472f10992ce6" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real star_particle::tform</definition>
-        <argsstring></argsstring>
-        <name>tform</name>
-        <qualifiedname>star_particle::tform</qualifiedname>
-        <briefdescription>
-<para>Formation time. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="57" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="57" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structstar__particle_1ad9bc18dabcea03f086984fb207e775ec" prot="public" static="no" mutable="no">
-        <type><ref refid="utils_2_phase_space_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref></type>
-        <definition>Real star_particle::vel</definition>
-        <argsstring>[MAXDIM]</argsstring>
-        <name>vel</name>
-        <qualifiedname>star_particle::vel</qualifiedname>
-        <briefdescription>
-<para>particle velocity vector </para>
-        </briefdescription>
-        <detaileddescription>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="53" column="10" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="53" bodyend="-1"/>
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-<para>Tipsy particle structure for a star particle. </para>
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-    <location file="/home/weinberg/Projects/EXP/src/tipsydefs.h" line="47" column="1" bodyfile="/home/weinberg/Projects/EXP/src/tipsydefs.h" bodystart="47" bodyend="62"/>
-    <listofallmembers>
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-      <member refid="structstar__particle_1a22c8264aa236c8e484994600f0482757" prot="public" virt="non-virtual"><scope>star_particle</scope><name>mass</name></member>
-      <member refid="structstar__particle_1ac6e5347d756bb19ab660df15fdc0d231" prot="public" virt="non-virtual"><scope>star_particle</scope><name>metals</name></member>
-      <member refid="structstar__particle_1a5cdb5f439b6c5cc8bc12a9a6084631fc" prot="public" virt="non-virtual"><scope>star_particle</scope><name>phi</name></member>
-      <member refid="structstar__particle_1a232e40d334a0fa00967a1ed92aa4493d" prot="public" virt="non-virtual"><scope>star_particle</scope><name>pos</name></member>
-      <member refid="structstar__particle_1a33fbc674592133b01b56472f10992ce6" prot="public" virt="non-virtual"><scope>star_particle</scope><name>tform</name></member>
-      <member refid="structstar__particle_1ad9bc18dabcea03f086984fb207e775ec" prot="public" virt="non-virtual"><scope>star_particle</scope><name>vel</name></member>
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diff --git a/doxyxml/structthrd__pass___pot_accel.xml b/doxyxml/structthrd__pass___pot_accel.xml
deleted file mode 100644
index 4546130..0000000
--- a/doxyxml/structthrd__pass___pot_accel.xml
+++ /dev/null
@@ -1,116 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structthrd__pass___pot_accel" kind="struct" language="C++" prot="public">
-    <compoundname>thrd_pass_PotAccel</compoundname>
-    <includes refid="_pot_accel_8_h" local="no">PotAccel.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structthrd__pass___pot_accel_1aa937d3332f5d4196f946a9d3699ee27e" prot="public" static="no" mutable="no">
-        <type>bool</type>
-        <definition>bool thrd_pass_PotAccel::coef</definition>
-        <argsstring></argsstring>
-        <name>coef</name>
-        <qualifiedname>thrd_pass_PotAccel::coef</qualifiedname>
-        <briefdescription>
-<para>Call coefficient thread member (true) or acceleration/potential (false) </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="246" column="8" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="246" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structthrd__pass___pot_accel_1a22e6dffd02de47a787874995b21fbd57" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int thrd_pass_PotAccel::id</definition>
-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>thrd_pass_PotAccel::id</qualifiedname>
-        <briefdescription>
-<para>Thread counter id. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="248" column="7" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="248" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structthrd__pass___pot_accel_1a942205c6b66936d893861394e91dd058" prot="public" static="no" mutable="no">
-        <type><ref refid="class_pot_accel" kindref="compound">PotAccel</ref> *</type>
-        <definition>PotAccel* thrd_pass_PotAccel::t</definition>
-        <argsstring></argsstring>
-        <name>t</name>
-        <qualifiedname>thrd_pass_PotAccel::t</qualifiedname>
-        <briefdescription>
-<para>Pointer to force. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="244" column="12" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="244" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Helper class to pass info to threaded member. </para>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
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-      <node id="3">
-        <label>Component</label>
-        <link refid="class_component"/>
-        <childnode refid="3" relation="usage">
-          <edgelabel>c0</edgelabel>
-        </childnode>
-        <childnode refid="2" relation="usage">
-          <edgelabel>force</edgelabel>
-        </childnode>
-        <childnode refid="4" relation="usage">
-          <edgelabel>orient</edgelabel>
-        </childnode>
-        <childnode refid="6" relation="usage">
-          <edgelabel>time_so_far</edgelabel>
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-      <node id="5">
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-        <label>Orient</label>
-        <link refid="class_orient"/>
-        <childnode refid="5" relation="usage">
-          <edgelabel>t</edgelabel>
-        </childnode>
-      </node>
-      <node id="2">
-        <label>PotAccel</label>
-        <link refid="class_pot_accel"/>
-        <childnode refid="1" relation="usage">
-          <edgelabel>td</edgelabel>
-        </childnode>
-        <childnode refid="3" relation="usage">
-          <edgelabel>cC</edgelabel>
-          <edgelabel>component</edgelabel>
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-      </node>
-      <node id="6">
-        <label>Timer</label>
-        <link refid="class_timer"/>
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-      <node id="1">
-        <label>thrd_pass_PotAccel</label>
-        <link refid="structthrd__pass___pot_accel"/>
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-          <edgelabel>t</edgelabel>
-        </childnode>
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-    </collaborationgraph>
-    <location file="/home/weinberg/Projects/EXP/src/PotAccel.H" line="241" column="1" bodyfile="/home/weinberg/Projects/EXP/src/PotAccel.H" bodystart="242" bodyend="249"/>
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-      <member refid="structthrd__pass___pot_accel_1aa937d3332f5d4196f946a9d3699ee27e" prot="public" virt="non-virtual"><scope>thrd_pass_PotAccel</scope><name>coef</name></member>
-      <member refid="structthrd__pass___pot_accel_1a22e6dffd02de47a787874995b21fbd57" prot="public" virt="non-virtual"><scope>thrd_pass_PotAccel</scope><name>id</name></member>
-      <member refid="structthrd__pass___pot_accel_1a942205c6b66936d893861394e91dd058" prot="public" virt="non-virtual"><scope>thrd_pass_PotAccel</scope><name>t</name></member>
-    </listofallmembers>
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diff --git a/doxyxml/structthrd__pass__posvel.xml b/doxyxml/structthrd__pass__posvel.xml
deleted file mode 100644
index cbde3df..0000000
--- a/doxyxml/structthrd__pass__posvel.xml
+++ /dev/null
@@ -1,65 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="structthrd__pass__posvel" kind="struct" language="C++" prot="public">
-    <compoundname>thrd_pass_posvel</compoundname>
-    <includes refid="global_8_h" local="no">global.H</includes>
-    <sectiondef kind="public-attrib">
-      <memberdef kind="variable" id="structthrd__pass__posvel_1a68df87648fa189497db1136090925eca" prot="public" static="no" mutable="no">
-        <type>double</type>
-        <definition>double thrd_pass_posvel::dt</definition>
-        <argsstring></argsstring>
-        <name>dt</name>
-        <qualifiedname>thrd_pass_posvel::dt</qualifiedname>
-        <briefdescription>
-<para><ref refid="class_time" kindref="compound">Time</ref> step. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="187" column="10" bodyfile="/home/weinberg/Projects/EXP/src/global.H" bodystart="187" bodyend="-1"/>
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-      <memberdef kind="variable" id="structthrd__pass__posvel_1a5fef752c3b812831522b33e73133c81e" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int thrd_pass_posvel::id</definition>
-        <argsstring></argsstring>
-        <name>id</name>
-        <qualifiedname>thrd_pass_posvel::id</qualifiedname>
-        <briefdescription>
-<para>Thread counter id. </para>
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-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="193" column="7" bodyfile="/home/weinberg/Projects/EXP/src/global.H" bodystart="193" bodyend="-1"/>
-      </memberdef>
-      <memberdef kind="variable" id="structthrd__pass__posvel_1a5e79046aca11e013713e0f9b94f2bb82" prot="public" static="no" mutable="no">
-        <type>int</type>
-        <definition>int thrd_pass_posvel::mlevel</definition>
-        <argsstring></argsstring>
-        <name>mlevel</name>
-        <qualifiedname>thrd_pass_posvel::mlevel</qualifiedname>
-        <briefdescription>
-<para>Levels flag. </para>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/src/global.H" line="190" column="7" bodyfile="/home/weinberg/Projects/EXP/src/global.H" bodystart="190" bodyend="-1"/>
-      </memberdef>
-    </sectiondef>
-    <briefdescription>
-<para>Helper class to pass info for incr_postion and incr_velocity. </para>
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-    <location file="/home/weinberg/Projects/EXP/src/global.H" line="184" column="1" bodyfile="/home/weinberg/Projects/EXP/src/global.H" bodystart="185" bodyend="194"/>
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-      <member refid="structthrd__pass__posvel_1a68df87648fa189497db1136090925eca" prot="public" virt="non-virtual"><scope>thrd_pass_posvel</scope><name>dt</name></member>
-      <member refid="structthrd__pass__posvel_1a5fef752c3b812831522b33e73133c81e" prot="public" virt="non-virtual"><scope>thrd_pass_posvel</scope><name>id</name></member>
-      <member refid="structthrd__pass__posvel_1a5e79046aca11e013713e0f9b94f2bb82" prot="public" virt="non-virtual"><scope>thrd_pass_posvel</scope><name>mlevel</name></member>
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diff --git a/doxyxml/tidal_field_8_h.xml b/doxyxml/tidal_field_8_h.xml
deleted file mode 100644
index a672b81..0000000
--- a/doxyxml/tidal_field_8_h.xml
+++ /dev/null
@@ -1,53 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="tidal_field_8_h" kind="file" language="C++">
-    <compoundname>tidalField.H</compoundname>
-    <includes local="no">yaml-cpp/yaml.h</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/src/tidalField.H</label>
-        <link refid="tidal_field_8_h"/>
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-      <node id="2">
-        <label>yaml-cpp/yaml.h</label>
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-    <innerclass refid="classtidal_field" prot="public">tidalField</innerclass>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_tidalField_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_tidalField_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;yaml-cpp/yaml.h&gt;</highlight><highlight class="normal"></highlight></codeline>
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-<codeline lineno="7"><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="classtidal_field" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="classtidal_field" kindref="compound">tidalField</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_external_force" kindref="compound">ExternalForce</ref></highlight></codeline>
-<codeline lineno="18"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="21" refid="classtidal_field_1a5dbcac9de363aea682f1dd910be51c02" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="classtidal_field_1a5dbcac9de363aea682f1dd910be51c02" kindref="member">initialize</ref>();</highlight></codeline>
-<codeline lineno="22" refid="classtidal_field_1adf3d4a7a4b92b82838c9822f4f52ef19" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="classtidal_field_1adf3d4a7a4b92b82838c9822f4f52ef19" kindref="member">hills_omega</ref>,<sp/><ref refid="classtidal_field_1a890474264063549c7093a7da03a218ac" kindref="member">hills_p</ref>;</highlight></codeline>
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-<codeline lineno="32" refid="classtidal_field_1acef78f19075d1f0a30d542aca9889c1d" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="classtidal_field_1acef78f19075d1f0a30d542aca9889c1d" kindref="member">tidalField</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>YAML::Node&amp;<sp/>config);</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="35" refid="classtidal_field_1ab816612a12c9fbd164d2f46e6f507a21" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="classtidal_field_1ab816612a12c9fbd164d2f46e6f507a21" kindref="member">~tidalField</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"></highlight></codeline>
-<codeline lineno="37"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"></highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
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diff --git a/doxyxml/tipsy_8_h.xml b/doxyxml/tipsy_8_h.xml
deleted file mode 100644
index 3076fc7..0000000
--- a/doxyxml/tipsy_8_h.xml
+++ /dev/null
@@ -1,385 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="tipsy_8_h" kind="file" language="C++">
-    <compoundname>tipsy.H</compoundname>
-    <includedby refid="_particle_reader_8_h" local="no">/home/weinberg/Projects/EXP/include/ParticleReader.H</includedby>
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-      <node id="2">
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-        <label>/home/weinberg/Projects/EXP/include/tipsy.H</label>
-        <link refid="tipsy_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-    </invincdepgraph>
-    <innerclass refid="struct_tipsy_reader_1_1dark__particle" prot="public">TipsyReader::dark_particle</innerclass>
-    <innerclass refid="struct_tipsy_reader_1_1gas__particle" prot="public">TipsyReader::gas_particle</innerclass>
-    <innerclass refid="struct_tipsy_reader_1_1_header" prot="public">TipsyReader::Header</innerclass>
-    <innerclass refid="struct_tipsy_reader_1_1star__particle" prot="public">TipsyReader::star_particle</innerclass>
-    <innerclass refid="class_tipsy_reader_1_1_tipsy_file" prot="public">TipsyReader::TipsyFile</innerclass>
-    <innerclass refid="class_tipsy_reader_1_1_tipsy_native" prot="public">TipsyReader::TipsyNative</innerclass>
-    <innernamespace refid="namespace_p_r">PR</innernamespace>
-    <innernamespace refid="namespace_tipsy_reader">TipsyReader</innernamespace>
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-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>_tipsy_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_tipsy_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Forward<sp/>declare<sp/>PR::Tipsy<sp/>so<sp/>it<sp/>can<sp/>friend<sp/>TipsyFile</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespace_p_r" kindref="compound">PR</ref><sp/>{</highlight></codeline>
-<codeline lineno="7"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">Tipsy;</highlight></codeline>
-<codeline lineno="8"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Uncommenting<sp/>the<sp/>define<sp/>below<sp/>is<sp/>an<sp/>old<sp/>fix<sp/>for<sp/>compilers<sp/>that</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight><highlight class="comment">//<sp/>promoted<sp/>the<sp/>28<sp/>byte<sp/>Tipsy<sp/>header<sp/>to<sp/>32<sp/>bytes<sp/>to<sp/>put<sp/>it<sp/>on<sp/>a<sp/>word</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="12"><highlight class="normal"></highlight><highlight class="comment">//<sp/>boundary.<sp/><sp/>I<sp/>don&apos;t<sp/>this<sp/>that<sp/>this<sp/>is<sp/>an<sp/>issue<sp/>in<sp/>modern<sp/>compilers.</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="13"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="comment">//<sp/>#define<sp/>TIPSY_32BYTE_PAD</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16" refid="namespace_tipsy_reader" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">namespace<sp/></highlight><highlight class="normal"><ref refid="namespace_tipsy_reader" kindref="compound">TipsyReader</ref></highlight></codeline>
-<codeline lineno="17"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19" refid="namespace_tipsy_reader_1af23a6c9592a10027cd1434a858c4881c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="namespace_tipsy_reader_1af23a6c9592a10027cd1434a858c4881c" kindref="member">MAXDIM</ref><sp/>=<sp/>3;</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="21" refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">using<sp/></highlight><highlight class="normal"><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/>=<sp/>float;</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23" refid="struct_tipsy_reader_1_1gas__particle" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_tipsy_reader_1_1gas__particle" kindref="compound">gas_particle</ref></highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"></highlight></codeline>
-<codeline lineno="27" refid="struct_tipsy_reader_1_1gas__particle_1a8da437cc8130ee49606e02ce3103527f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a8da437cc8130ee49606e02ce3103527f" kindref="member">mass</ref><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="28" refid="struct_tipsy_reader_1_1gas__particle_1a0087a5ff56836243a1755ece5fd8a9e9" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a0087a5ff56836243a1755ece5fd8a9e9" kindref="member">pos</ref>[<ref refid="namespace_tipsy_reader_1af23a6c9592a10027cd1434a858c4881c" kindref="member">MAXDIM</ref>];</highlight></codeline>
-<codeline lineno="29" refid="struct_tipsy_reader_1_1gas__particle_1a481e2d4e3ddd4c62451d03ecc7655cc3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a481e2d4e3ddd4c62451d03ecc7655cc3" kindref="member">vel</ref>[<ref refid="namespace_tipsy_reader_1af23a6c9592a10027cd1434a858c4881c" kindref="member">MAXDIM</ref>];</highlight></codeline>
-<codeline lineno="30" refid="struct_tipsy_reader_1_1gas__particle_1ae788cf48f47a692bc247ec98c10f076f" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1ae788cf48f47a692bc247ec98c10f076f" kindref="member">rho</ref><sp/><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="31" refid="struct_tipsy_reader_1_1gas__particle_1a93e74bea488fa8b4d0846a711662c7cc" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a93e74bea488fa8b4d0846a711662c7cc" kindref="member">temp</ref><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="32" refid="struct_tipsy_reader_1_1gas__particle_1a8edc1bfd7be3c47e9d5c9a25a682f56e" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a8edc1bfd7be3c47e9d5c9a25a682f56e" kindref="member">hsmooth</ref>;</highlight></codeline>
-<codeline lineno="33" refid="struct_tipsy_reader_1_1gas__particle_1a40504c0e094c4300a2b048ee22671d64" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a40504c0e094c4300a2b048ee22671d64" kindref="member">metals</ref><sp/>;</highlight></codeline>
-<codeline lineno="34" refid="struct_tipsy_reader_1_1gas__particle_1a82608843a4e2434082dfb368040560e5" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a82608843a4e2434082dfb368040560e5" kindref="member">phi</ref><sp/><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="36"></codeline>
-<codeline lineno="38" refid="struct_tipsy_reader_1_1gas__particle_1a915b7fad4e97d23797f7fa93a64ab87c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a915b7fad4e97d23797f7fa93a64ab87c" kindref="member">ID</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">union<sp/></highlight><highlight class="normal">id<sp/>{<ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/>v;<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i;}<sp/>u;</highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>u.v<sp/>=<sp/><ref refid="struct_tipsy_reader_1_1gas__particle_1a82608843a4e2434082dfb368040560e5" kindref="member">phi</ref>;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>u.i;</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/>}<sp/>;</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"></highlight></codeline>
-<codeline lineno="44" refid="struct_tipsy_reader_1_1dark__particle" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_tipsy_reader_1_1dark__particle" kindref="compound">dark_particle</ref></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"></highlight></codeline>
-<codeline lineno="48" refid="struct_tipsy_reader_1_1dark__particle_1a4b9207514953615d6892b9114fe59444" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1dark__particle_1a4b9207514953615d6892b9114fe59444" kindref="member">mass</ref><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="49" refid="struct_tipsy_reader_1_1dark__particle_1a1fa66fabc8a7a537033ff059f7cf17c1" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1dark__particle_1a1fa66fabc8a7a537033ff059f7cf17c1" kindref="member">pos</ref>[<ref refid="namespace_tipsy_reader_1af23a6c9592a10027cd1434a858c4881c" kindref="member">MAXDIM</ref>];</highlight></codeline>
-<codeline lineno="50" refid="struct_tipsy_reader_1_1dark__particle_1a2697460ba618a3aa4e485afdc0d41a7d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1dark__particle_1a2697460ba618a3aa4e485afdc0d41a7d" kindref="member">vel</ref>[<ref refid="namespace_tipsy_reader_1af23a6c9592a10027cd1434a858c4881c" kindref="member">MAXDIM</ref>];</highlight></codeline>
-<codeline lineno="51" refid="struct_tipsy_reader_1_1dark__particle_1a1533fc2fab052f3b9c7d252bb91cac42" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1dark__particle_1a1533fc2fab052f3b9c7d252bb91cac42" kindref="member">eps</ref><sp/><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="52" refid="struct_tipsy_reader_1_1dark__particle_1a63afa46b9f9a18ad00f631885adabf69" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1dark__particle_1a63afa46b9f9a18ad00f631885adabf69" kindref="member">phi</ref><sp/><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="56" refid="struct_tipsy_reader_1_1dark__particle_1a08b7b65380c2148be53d356438fab7f4" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1dark__particle_1a08b7b65380c2148be53d356438fab7f4" kindref="member">ID</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">union<sp/></highlight><highlight class="normal">id<sp/>{<ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/>v;<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i;}<sp/>u;</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>u.v<sp/>=<sp/><ref refid="struct_tipsy_reader_1_1dark__particle_1a63afa46b9f9a18ad00f631885adabf69" kindref="member">phi</ref>;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>u.i;</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="60"><highlight class="normal"><sp/><sp/>}<sp/>;</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"></highlight></codeline>
-<codeline lineno="62" refid="struct_tipsy_reader_1_1star__particle" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_tipsy_reader_1_1star__particle" kindref="compound">star_particle</ref></highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66" refid="struct_tipsy_reader_1_1star__particle_1aa8b5eaaa780570787fe4f71d83ee3fed" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1star__particle_1aa8b5eaaa780570787fe4f71d83ee3fed" kindref="member">mass</ref><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="67" refid="struct_tipsy_reader_1_1star__particle_1accb22a871f58b96339b8377413e04b2c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1star__particle_1accb22a871f58b96339b8377413e04b2c" kindref="member">pos</ref>[<ref refid="namespace_tipsy_reader_1af23a6c9592a10027cd1434a858c4881c" kindref="member">MAXDIM</ref>];</highlight></codeline>
-<codeline lineno="68" refid="struct_tipsy_reader_1_1star__particle_1a3d7c8ef10ca7aa5c133fed4401f53264" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1star__particle_1a3d7c8ef10ca7aa5c133fed4401f53264" kindref="member">vel</ref>[<ref refid="namespace_tipsy_reader_1af23a6c9592a10027cd1434a858c4881c" kindref="member">MAXDIM</ref>];</highlight></codeline>
-<codeline lineno="69" refid="struct_tipsy_reader_1_1star__particle_1afc2d178b52205d8ec50aaa3f23b4b9cf" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1star__particle_1afc2d178b52205d8ec50aaa3f23b4b9cf" kindref="member">metals</ref><sp/>;</highlight></codeline>
-<codeline lineno="70" refid="struct_tipsy_reader_1_1star__particle_1a314905c47567a7151187bacfb0fcb60a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1star__particle_1a314905c47567a7151187bacfb0fcb60a" kindref="member">tform</ref><sp/><sp/>;</highlight></codeline>
-<codeline lineno="71" refid="struct_tipsy_reader_1_1star__particle_1af21b04d626cd1351ac62b677ee762c3b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1star__particle_1af21b04d626cd1351ac62b677ee762c3b" kindref="member">eps</ref><sp/><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="72" refid="struct_tipsy_reader_1_1star__particle_1a55abe5d54ae148c226df2c754b8b5d54" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/><ref refid="struct_tipsy_reader_1_1star__particle_1a55abe5d54ae148c226df2c754b8b5d54" kindref="member">phi</ref><sp/><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="74"></codeline>
-<codeline lineno="76" refid="struct_tipsy_reader_1_1star__particle_1a19ec9c380006d548220a7a0038bb1149" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1star__particle_1a19ec9c380006d548220a7a0038bb1149" kindref="member">ID</ref>()</highlight><highlight class="keyword"><sp/>const<sp/></highlight><highlight class="normal">{</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">union<sp/></highlight><highlight class="normal">id<sp/>{<ref refid="namespace_tipsy_reader_1a9f3f16da2aebc545b353532d9cd2e9fd" kindref="member">Real</ref><sp/>v;<sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>i;}<sp/>u;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>u.v<sp/>=<sp/><ref refid="struct_tipsy_reader_1_1star__particle_1a55abe5d54ae148c226df2c754b8b5d54" kindref="member">phi</ref>;<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>u.i;</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="80"><highlight class="normal"><sp/><sp/>}<sp/>;</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="82" refid="struct_tipsy_reader_1_1_header" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">struct<sp/></highlight><highlight class="normal"><ref refid="struct_tipsy_reader_1_1_header" kindref="compound">Header</ref></highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="84" refid="struct_tipsy_reader_1_1_header_1a58316e2733c7431ff70b99520416fabb" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1_header_1a58316e2733c7431ff70b99520416fabb" kindref="member">time</ref><sp/>;</highlight></codeline>
-<codeline lineno="85" refid="struct_tipsy_reader_1_1_header_1abfbcb8f5b10f524234005185c3605777" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1_header_1abfbcb8f5b10f524234005185c3605777" kindref="member">nbodies</ref><sp/>;</highlight></codeline>
-<codeline lineno="86" refid="struct_tipsy_reader_1_1_header_1acfbd91ee8125a0ec4f463c1e29c43750" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1_header_1acfbd91ee8125a0ec4f463c1e29c43750" kindref="member">ndim</ref><sp/><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="87" refid="struct_tipsy_reader_1_1_header_1a07d0d31be0256e96afdbed8a7f622476" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1_header_1a07d0d31be0256e96afdbed8a7f622476" kindref="member">nsph</ref><sp/><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="88" refid="struct_tipsy_reader_1_1_header_1a9f2e10581ac89a477290bcec9dd5358d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1_header_1a9f2e10581ac89a477290bcec9dd5358d" kindref="member">ndark</ref><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="89" refid="struct_tipsy_reader_1_1_header_1a1a2dbd64e45844a7b922ead0e91e7d43" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="struct_tipsy_reader_1_1_header_1a1a2dbd64e45844a7b922ead0e91e7d43" kindref="member">nstar</ref><sp/><sp/><sp/>;</highlight></codeline>
-<codeline lineno="90"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>TIPSY_32BYTE_PAD</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>version<sp/>;</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="93"><highlight class="normal"><sp/><sp/>}<sp/>;</highlight></codeline>
-<codeline lineno="94"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="95" refid="class_tipsy_reader_1_1_tipsy_file" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_tipsy_reader_1_1_tipsy_file" kindref="compound">TipsyFile</ref></highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">protected</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"></highlight></codeline>
-<codeline lineno="99" refid="class_tipsy_reader_1_1_tipsy_file_1a03e8e544f96fc28acdf04fd7e9712c9d" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a03e8e544f96fc28acdf04fd7e9712c9d" kindref="member">read_gas</ref><sp/>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="100" refid="class_tipsy_reader_1_1_tipsy_file_1aa13ce8c1367ba218f7dc8d71e1b77a4a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1aa13ce8c1367ba218f7dc8d71e1b77a4a" kindref="member">read_dark</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="101" refid="class_tipsy_reader_1_1_tipsy_file_1a1e698ce973c2cfc6388bd9a945378867" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a1e698ce973c2cfc6388bd9a945378867" kindref="member">read_star</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"></highlight></codeline>
-<codeline lineno="103"><highlight class="normal"></highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="class_tipsy_reader_1_1_tipsy_file_1a8057038a6547c7db63be874670427e83" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;gas_particle&gt;<sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a8057038a6547c7db63be874670427e83" kindref="member">gas_particles</ref>;</highlight></codeline>
-<codeline lineno="107" refid="class_tipsy_reader_1_1_tipsy_file_1a1aea7f2b1c040ac5cdfaa32f43398a65" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;dark_particle&gt;<sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a1aea7f2b1c040ac5cdfaa32f43398a65" kindref="member">dark_particles</ref>;</highlight></codeline>
-<codeline lineno="108" refid="class_tipsy_reader_1_1_tipsy_file_1ab8af3d92a2f7fee5d45bf4359ee9a87a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::vector&lt;star_particle&gt;<sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1ab8af3d92a2f7fee5d45bf4359ee9a87a" kindref="member">star_particles</ref>;</highlight></codeline>
-<codeline lineno="109" refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="struct_tipsy_reader_1_1_header" kindref="compound">Header</ref><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"></highlight></codeline>
-<codeline lineno="111" refid="class_tipsy_reader_1_1_tipsy_file_1aaab1f889ebbe3d4ac3e9fed796ec9067" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1aaab1f889ebbe3d4ac3e9fed796ec9067" kindref="member">readParticles</ref>()<sp/>=<sp/>0;</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"></highlight></codeline>
-<codeline lineno="113" refid="class_tipsy_reader_1_1_tipsy_file_1afb2e0bc5648d17954ffd7ced4768b69b" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">virtual</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1afb2e0bc5648d17954ffd7ced4768b69b" kindref="member">~TipsyFile</ref>()<sp/>{}</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"></highlight></codeline>
-<codeline lineno="116"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>HAVE_XDR</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="117"><highlight class="normal"></highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;rpc/types.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;rpc/xdr.h&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal">TipsyXDR<sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/>TipsyFile</highlight></codeline>
-<codeline lineno="122"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="123"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="124"><highlight class="normal"></highlight></codeline>
-<codeline lineno="125"><highlight class="normal"><sp/><sp/><sp/><sp/>FILE*<sp/>input;</highlight></codeline>
-<codeline lineno="126"><highlight class="normal"><sp/><sp/><sp/><sp/>XDR<sp/>xdrs;</highlight></codeline>
-<codeline lineno="127"><highlight class="normal"></highlight></codeline>
-<codeline lineno="128"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>xdr_header()</highlight></codeline>
-<codeline lineno="129"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="130"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xdr_double(&amp;xdrs,<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1a2e2b1a1dcb6bd2693a3b0535f11cacaf" kindref="member">time</ref>)<sp/>!=<sp/>TRUE)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="131"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xdr_int(&amp;xdrs,<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1ac8164fc60f6f329a9cd7f0b44cc9746c" kindref="member">nbodies</ref>)<sp/>!=<sp/>TRUE)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="132"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xdr_int(&amp;xdrs,<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1aa48f8ee27856137e78832c1faa682332" kindref="member">ndim</ref>)<sp/><sp/><sp/><sp/>!=<sp/>TRUE)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="133"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xdr_int(&amp;xdrs,<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1ab438c1d3692a22a692da61004263404e" kindref="member">nsph</ref>)<sp/><sp/><sp/><sp/>!=<sp/>TRUE)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="134"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xdr_int(&amp;xdrs,<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1a82c00b82a3a31c80d92e5b33d4297293" kindref="member">ndark</ref>)<sp/><sp/><sp/>!=<sp/>TRUE)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="135"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xdr_int(&amp;xdrs,<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1adecbc996a89feae2cd3a418d8692bea2" kindref="member">nstar</ref>)<sp/><sp/><sp/>!=<sp/>TRUE)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="136"><highlight class="normal"></highlight><highlight class="preprocessor">#ifdef<sp/>TIPSY_32BYTE_PAD</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="137"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xdr_int(&amp;xdrs,<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.version)<sp/>!=<sp/>TRUE)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="138"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="139"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1;</highlight></codeline>
-<codeline lineno="140"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="141"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="142"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="utils_2_phase_space_2tipsydefs_8h_1ad5c01cb2c6a74faae19cf4a55e01b4cd" kindref="member">xdr_init</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>filename)</highlight></codeline>
-<codeline lineno="143"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="144"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>input<sp/>=<sp/>fopen(filename.c_str(),<sp/></highlight><highlight class="stringliteral">&quot;r&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="145"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(fopen==NULL)<sp/>{</highlight></codeline>
-<codeline lineno="146"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::ostringstream<sp/>sout;</highlight></codeline>
-<codeline lineno="147"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>sout<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;TipsyFile:<sp/>error<sp/>opening<sp/>file<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>filename<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="148"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(sout.str());</highlight></codeline>
-<codeline lineno="149"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="150"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="151"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>xdrstdio_create(&amp;xdrs,<sp/>input,<sp/>XDR_DECODE);</highlight></codeline>
-<codeline lineno="152"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="153"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(xdr_header()<sp/>!=<sp/>1)<sp/>{</highlight></codeline>
-<codeline lineno="154"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;TipsyFile:<sp/>could<sp/>not<sp/>read<sp/>a<sp/>valid<sp/>header&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="156"><highlight class="normal"></highlight></codeline>
-<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1ac8164fc60f6f329a9cd7f0b44cc9746c" kindref="member">nbodies</ref>;</highlight></codeline>
-<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="159"><highlight class="normal"></highlight></codeline>
-<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>xdr_read()</highlight></codeline>
-<codeline lineno="161"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="162"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N=0;</highlight></codeline>
-<codeline lineno="163"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="164"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1ab438c1d3692a22a692da61004263404e" kindref="member">nsph</ref><sp/>!=<sp/>0)<sp/><sp/>{</highlight></codeline>
-<codeline lineno="165"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="src_2tipsydefs_8h_1ad3e6da03befb06eb46e4445d729e974d" kindref="member">gas_particles</ref>.resize(<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1ab438c1d3692a22a692da61004263404e" kindref="member">nsph</ref>);</highlight></codeline>
-<codeline lineno="166"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>read_gas();</highlight></codeline>
-<codeline lineno="167"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>N++;</highlight></codeline>
-<codeline lineno="168"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="169"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="170"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1a82c00b82a3a31c80d92e5b33d4297293" kindref="member">ndark</ref><sp/>!=<sp/>0)<sp/>{</highlight></codeline>
-<codeline lineno="171"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="src_2tipsydefs_8h_1a36fece5e2f4214b23ff9ec3f639e4d11" kindref="member">dark_particles</ref>.resize(<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1a82c00b82a3a31c80d92e5b33d4297293" kindref="member">ndark</ref>);</highlight></codeline>
-<codeline lineno="172"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>read_dark();</highlight></codeline>
-<codeline lineno="173"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>N++;</highlight></codeline>
-<codeline lineno="174"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="175"><highlight class="normal"></highlight></codeline>
-<codeline lineno="176"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1adecbc996a89feae2cd3a418d8692bea2" kindref="member">nstar</ref><sp/>!=<sp/>0)<sp/>{</highlight></codeline>
-<codeline lineno="177"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="src_2tipsydefs_8h_1a05dce9e888e23bbabf50fe010f5e3c9e" kindref="member">star_particles</ref>.resize(<ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1adecbc996a89feae2cd3a418d8692bea2" kindref="member">nstar</ref>);</highlight></codeline>
-<codeline lineno="178"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>read_star();</highlight></codeline>
-<codeline lineno="179"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>N++;</highlight></codeline>
-<codeline lineno="180"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="181"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="182"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>N;</highlight></codeline>
-<codeline lineno="183"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="184"><highlight class="normal"></highlight></codeline>
-<codeline lineno="185"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>read_gas()</highlight></codeline>
-<codeline lineno="186"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="187"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>)<sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">))<sp/>{</highlight></codeline>
-<codeline lineno="188"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>xdr_vector(&amp;xdrs,<sp/>(</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)<sp/>&amp;<ref refid="src_2tipsydefs_8h_1ad3e6da03befb06eb46e4445d729e974d" kindref="member">gas_particles</ref>[0],</highlight></codeline>
-<codeline lineno="189"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1ab438c1d3692a22a692da61004263404e" kindref="member">nsph</ref>*(</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="structgas__particle" kindref="compound">gas_particle</ref>)/</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>)),</highlight></codeline>
-<codeline lineno="190"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>),<sp/>(xdrproc_t)<sp/>xdr_float);</highlight></codeline>
-<codeline lineno="191"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="192"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/><sp/></highlight></codeline>
-<codeline lineno="193"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="194"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>read_dark()</highlight></codeline>
-<codeline lineno="195"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="196"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>)<sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">))<sp/>{</highlight></codeline>
-<codeline lineno="197"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>xdr_vector(&amp;xdrs,<sp/>(</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a36fece5e2f4214b23ff9ec3f639e4d11" kindref="member">dark_particles</ref>[0],</highlight></codeline>
-<codeline lineno="198"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1a82c00b82a3a31c80d92e5b33d4297293" kindref="member">ndark</ref>*(</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="structdark__particle" kindref="compound">dark_particle</ref>)/</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>)),</highlight></codeline>
-<codeline lineno="199"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>),<sp/>(xdrproc_t)<sp/>xdr_float);</highlight></codeline>
-<codeline lineno="200"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="201"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/><sp/></highlight></codeline>
-<codeline lineno="202"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="203"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/>read_star()</highlight></codeline>
-<codeline lineno="204"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="205"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>)<sp/>==<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">))<sp/>{</highlight></codeline>
-<codeline lineno="206"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>xdr_vector(&amp;xdrs,<sp/>(</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)<sp/>&amp;<ref refid="src_2tipsydefs_8h_1a05dce9e888e23bbabf50fe010f5e3c9e" kindref="member">star_particles</ref>[0],</highlight></codeline>
-<codeline lineno="207"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="src_2tipsydefs_8h_1a6349b18097d9888f9071e823186391e9" kindref="member">header</ref>.<ref refid="structdump_1adecbc996a89feae2cd3a418d8692bea2" kindref="member">nstar</ref>*(</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="structstar__particle" kindref="compound">star_particle</ref>)/</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>)),</highlight></codeline>
-<codeline lineno="208"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="src_2tipsydefs_8h_1ab685845059e8a2c92743427d9a698c70" kindref="member">Real</ref>),<sp/>(xdrproc_t)<sp/>xdr_float);</highlight></codeline>
-<codeline lineno="209"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="210"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/><sp/></highlight></codeline>
-<codeline lineno="211"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="212"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_tipsy" kindref="compound">PR::Tipsy</ref>;</highlight></codeline>
-<codeline lineno="213"><highlight class="normal"></highlight></codeline>
-<codeline lineno="214"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="215"><highlight class="normal"></highlight></codeline>
-<codeline lineno="216"><highlight class="normal"><sp/><sp/><sp/><sp/>TipsyXDR(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>filename)</highlight></codeline>
-<codeline lineno="217"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="218"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Attempt<sp/>to<sp/>read<sp/>tipsy<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="219"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/><ref refid="utils_2_phase_space_2tipsydefs_8h_1ad5c01cb2c6a74faae19cf4a55e01b4cd" kindref="member">xdr_init</ref>(filename);</highlight></codeline>
-<codeline lineno="220"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(ret==0)<sp/>{</highlight></codeline>
-<codeline lineno="221"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;TipsyFile:<sp/>no<sp/>bodies<sp/>found??&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="222"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="223"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="224"><highlight class="normal"></highlight></codeline>
-<codeline lineno="225"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>readParticles()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>xdr_read();<sp/>}</highlight></codeline>
-<codeline lineno="226"><highlight class="normal"></highlight></codeline>
-<codeline lineno="227"><highlight class="normal"><sp/><sp/><sp/><sp/>~TipsyXDR()</highlight></codeline>
-<codeline lineno="228"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="229"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>xdr_destroy(&amp;xdrs);</highlight></codeline>
-<codeline lineno="230"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>fclose(input);</highlight></codeline>
-<codeline lineno="231"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="232"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="233"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="234"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="235"><highlight class="normal"></highlight></codeline>
-<codeline lineno="236"><highlight class="normal"></highlight></codeline>
-<codeline lineno="237" refid="class_tipsy_reader_1_1_tipsy_native" refkind="compound"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_tipsy_reader_1_1_tipsy_native" kindref="compound">TipsyNative</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file" kindref="compound">TipsyFile</ref></highlight></codeline>
-<codeline lineno="238"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="239"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="240"><highlight class="normal"></highlight></codeline>
-<codeline lineno="242" refid="class_tipsy_reader_1_1_tipsy_native_1a25a6f484a2a47171c7fc1d793b4b1c81" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/>std::ifstream<sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a25a6f484a2a47171c7fc1d793b4b1c81" kindref="member">input</ref>;</highlight></codeline>
-<codeline lineno="243"><highlight class="normal"></highlight></codeline>
-<codeline lineno="245" refid="class_tipsy_reader_1_1_tipsy_native_1ac1381566d264de799efce94a533ae3e2" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1ac1381566d264de799efce94a533ae3e2" kindref="member">native_header</ref>()</highlight></codeline>
-<codeline lineno="246"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="247"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="248"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a25a6f484a2a47171c7fc1d793b4b1c81" kindref="member">input</ref>.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)&amp;<ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>,<sp/></highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>));</highlight></codeline>
-<codeline lineno="249"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(std::exception&amp;<sp/>e)<sp/>{</highlight></codeline>
-<codeline lineno="250"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;TipsyFile<sp/>native_header<sp/>error:<sp/>&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>e.what()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="251"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="252"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="253"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1;</highlight></codeline>
-<codeline lineno="254"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="255"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="256" refid="class_tipsy_reader_1_1_tipsy_native_1a07e65f7d2700db13e08d54d6c44e268a" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a07e65f7d2700db13e08d54d6c44e268a" kindref="member">native_init</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string&amp;<sp/>filename)</highlight></codeline>
-<codeline lineno="257"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="258"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="259"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a25a6f484a2a47171c7fc1d793b4b1c81" kindref="member">input</ref>.open(filename);</highlight></codeline>
-<codeline lineno="260"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a25a6f484a2a47171c7fc1d793b4b1c81" kindref="member">input</ref>.exceptions(ifstream::eofbit<sp/>|<sp/>ifstream::failbit<sp/>|<sp/>ifstream::badbit);</highlight></codeline>
-<codeline lineno="261"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}<sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(std::exception&amp;<sp/>e)<sp/>{</highlight></codeline>
-<codeline lineno="262"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;TipsyFile<sp/>native<sp/>error<sp/>opening<sp/>file<sp/>&lt;&quot;</highlight><highlight class="normal"><sp/>&lt;&lt;<sp/>filename<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;&gt;,<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="263"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>e.what()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="264"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="265"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="266"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="267"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_tipsy_reader_1_1_tipsy_native_1ac1381566d264de799efce94a533ae3e2" kindref="member">native_header</ref>()<sp/>!=<sp/>1)<sp/>{</highlight></codeline>
-<codeline lineno="268"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;TipsyFile<sp/>native:<sp/>could<sp/>not<sp/>read<sp/>a<sp/>valid<sp/>header&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="269"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="270"><highlight class="normal"></highlight></codeline>
-<codeline lineno="271"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1abfbcb8f5b10f524234005185c3605777" kindref="member">nbodies</ref>;</highlight></codeline>
-<codeline lineno="272"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="273"><highlight class="normal"></highlight></codeline>
-<codeline lineno="274" refid="class_tipsy_reader_1_1_tipsy_native_1ab8688a140fee2a3d8c0b94481c500f57" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1ab8688a140fee2a3d8c0b94481c500f57" kindref="member">native_read</ref>()</highlight></codeline>
-<codeline lineno="275"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="276"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>N=0;</highlight></codeline>
-<codeline lineno="277"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="278"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a07d0d31be0256e96afdbed8a7f622476" kindref="member">nsph</ref><sp/>!=<sp/>0)<sp/><sp/>{</highlight></codeline>
-<codeline lineno="279"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a8057038a6547c7db63be874670427e83" kindref="member">gas_particles</ref>.resize(<ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a07d0d31be0256e96afdbed8a7f622476" kindref="member">nsph</ref>);</highlight></codeline>
-<codeline lineno="280"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1aec4f36487917406de9f211144528c736" kindref="member">read_gas</ref>();</highlight></codeline>
-<codeline lineno="281"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>N++;</highlight></codeline>
-<codeline lineno="282"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="283"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="284"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a9f2e10581ac89a477290bcec9dd5358d" kindref="member">ndark</ref><sp/>!=<sp/>0)<sp/>{</highlight></codeline>
-<codeline lineno="285"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a1aea7f2b1c040ac5cdfaa32f43398a65" kindref="member">dark_particles</ref>.resize(<ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a9f2e10581ac89a477290bcec9dd5358d" kindref="member">ndark</ref>);</highlight></codeline>
-<codeline lineno="286"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1ad3739c9bd257cb62cad6784202129f51" kindref="member">read_dark</ref>();</highlight></codeline>
-<codeline lineno="287"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>N++;</highlight></codeline>
-<codeline lineno="288"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="289"><highlight class="normal"></highlight></codeline>
-<codeline lineno="290"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(<ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a1a2dbd64e45844a7b922ead0e91e7d43" kindref="member">nstar</ref><sp/>!=<sp/>0)<sp/>{</highlight></codeline>
-<codeline lineno="291"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1ab8af3d92a2f7fee5d45bf4359ee9a87a" kindref="member">star_particles</ref>.resize(<ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a1a2dbd64e45844a7b922ead0e91e7d43" kindref="member">nstar</ref>);</highlight></codeline>
-<codeline lineno="292"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1aea58f6fa793355dc00bfb917c9e04b9c" kindref="member">read_star</ref>();</highlight></codeline>
-<codeline lineno="293"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>N++;</highlight></codeline>
-<codeline lineno="294"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="295"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="296"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>N;</highlight></codeline>
-<codeline lineno="297"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="298"><highlight class="normal"></highlight></codeline>
-<codeline lineno="299" refid="class_tipsy_reader_1_1_tipsy_native_1aec4f36487917406de9f211144528c736" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1aec4f36487917406de9f211144528c736" kindref="member">read_gas</ref>()</highlight></codeline>
-<codeline lineno="300"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="301"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="302"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a25a6f484a2a47171c7fc1d793b4b1c81" kindref="member">input</ref>.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)<sp/>&amp;<ref refid="class_tipsy_reader_1_1_tipsy_file_1a8057038a6547c7db63be874670427e83" kindref="member">gas_particles</ref>[0],</highlight></codeline>
-<codeline lineno="303"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a07d0d31be0256e96afdbed8a7f622476" kindref="member">nsph</ref>*</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="struct_tipsy_reader_1_1gas__particle" kindref="compound">gas_particle</ref>));</highlight></codeline>
-<codeline lineno="304"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="305"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(std::exception&amp;<sp/>e)<sp/>{</highlight></codeline>
-<codeline lineno="306"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;TipsyFile<sp/>native<sp/>error<sp/>reading<sp/>sph<sp/>particles:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="307"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>e.what()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="308"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="309"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="310"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="311"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="312" refid="class_tipsy_reader_1_1_tipsy_native_1ad3739c9bd257cb62cad6784202129f51" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1ad3739c9bd257cb62cad6784202129f51" kindref="member">read_dark</ref>()</highlight></codeline>
-<codeline lineno="313"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="314"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="315"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a25a6f484a2a47171c7fc1d793b4b1c81" kindref="member">input</ref>.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)<sp/>&amp;<ref refid="class_tipsy_reader_1_1_tipsy_file_1a1aea7f2b1c040ac5cdfaa32f43398a65" kindref="member">dark_particles</ref>[0],</highlight></codeline>
-<codeline lineno="316"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a9f2e10581ac89a477290bcec9dd5358d" kindref="member">ndark</ref>*</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="struct_tipsy_reader_1_1dark__particle" kindref="compound">dark_particle</ref>));</highlight></codeline>
-<codeline lineno="317"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="318"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(std::exception&amp;<sp/>e)<sp/>{</highlight></codeline>
-<codeline lineno="319"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;TipsyFile<sp/>native<sp/>error<sp/>reading<sp/>dark<sp/>particles:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="320"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>e.what()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="321"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="322"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="323"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/><sp/></highlight></codeline>
-<codeline lineno="324"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="325" refid="class_tipsy_reader_1_1_tipsy_native_1aea58f6fa793355dc00bfb917c9e04b9c" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1aea58f6fa793355dc00bfb917c9e04b9c" kindref="member">read_star</ref>()</highlight></codeline>
-<codeline lineno="326"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="327"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">try</highlight><highlight class="normal"><sp/>{</highlight></codeline>
-<codeline lineno="328"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a25a6f484a2a47171c7fc1d793b4b1c81" kindref="member">input</ref>.read((</highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/>*)<sp/>&amp;<ref refid="class_tipsy_reader_1_1_tipsy_file_1ab8af3d92a2f7fee5d45bf4359ee9a87a" kindref="member">star_particles</ref>[0],</highlight></codeline>
-<codeline lineno="329"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_file_1a323dc064bb3bba38cada63fc6ec043b0" kindref="member">header</ref>.<ref refid="struct_tipsy_reader_1_1_header_1a1a2dbd64e45844a7b922ead0e91e7d43" kindref="member">nstar</ref>*</highlight><highlight class="keyword">sizeof</highlight><highlight class="normal">(<ref refid="struct_tipsy_reader_1_1star__particle" kindref="compound">star_particle</ref>));</highlight></codeline>
-<codeline lineno="330"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="331"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">catch</highlight><highlight class="normal"><sp/>(std::exception&amp;<sp/>e)<sp/>{</highlight></codeline>
-<codeline lineno="332"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>std::cerr<sp/>&lt;&lt;<sp/></highlight><highlight class="stringliteral">&quot;TipsyFile<sp/>native<sp/>error<sp/>reading<sp/>star<sp/>particles:<sp/>&quot;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="333"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>&lt;&lt;<sp/>e.what()<sp/>&lt;&lt;<sp/>std::endl;</highlight></codeline>
-<codeline lineno="334"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="335"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="336"><highlight class="normal"><sp/><sp/><sp/><sp/>}<sp/><sp/></highlight></codeline>
-<codeline lineno="337"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="338" refid="class_tipsy_reader_1_1_tipsy_native_1ada0da9ae5328d12db8eec09f81963bc0" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keyword">friend</highlight><highlight class="normal"><sp/></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_p_r_1_1_tipsy" kindref="compound">PR::Tipsy</ref>;</highlight></codeline>
-<codeline lineno="339"><highlight class="normal"></highlight></codeline>
-<codeline lineno="340"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="341"><highlight class="normal"></highlight></codeline>
-<codeline lineno="342" refid="class_tipsy_reader_1_1_tipsy_native_1ae68caa5e1aad55b73eab48dc750fcce3" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1ae68caa5e1aad55b73eab48dc750fcce3" kindref="member">TipsyNative</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/>std::string<sp/>filename)</highlight></codeline>
-<codeline lineno="343"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="344"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Attempt<sp/>to<sp/>read<sp/>tipsy<sp/>file</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="345"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>ret<sp/>=<sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a07e65f7d2700db13e08d54d6c44e268a" kindref="member">native_init</ref>(filename);</highlight></codeline>
-<codeline lineno="346"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(ret==0)<sp/>{</highlight></codeline>
-<codeline lineno="347"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">throw</highlight><highlight class="normal"><sp/>std::runtime_error(</highlight><highlight class="stringliteral">&quot;TipsyFile:<sp/>no<sp/>bodies<sp/>found??&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="348"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="349"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="350"><highlight class="normal"></highlight></codeline>
-<codeline lineno="351" refid="class_tipsy_reader_1_1_tipsy_native_1a75878e9595784597d0658b0e4c78f666" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a75878e9595784597d0658b0e4c78f666" kindref="member">readParticles</ref>()<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1ab8688a140fee2a3d8c0b94481c500f57" kindref="member">native_read</ref>();<sp/>}</highlight></codeline>
-<codeline lineno="352"><highlight class="normal"></highlight></codeline>
-<codeline lineno="353" refid="class_tipsy_reader_1_1_tipsy_native_1a7fb3ef9a64bdc60556f46c79c188cf74" refkind="member"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_tipsy_reader_1_1_tipsy_native_1a7fb3ef9a64bdc60556f46c79c188cf74" kindref="member">~TipsyNative</ref>()</highlight></codeline>
-<codeline lineno="354"><highlight class="normal"><sp/><sp/><sp/><sp/>{</highlight></codeline>
-<codeline lineno="355"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="comment">//<sp/>Nothing</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="356"><highlight class="normal"><sp/><sp/><sp/><sp/>}</highlight></codeline>
-<codeline lineno="357"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="358"><highlight class="normal"><sp/><sp/>};</highlight></codeline>
-<codeline lineno="359"><highlight class="normal"></highlight></codeline>
-<codeline lineno="360"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="361"><highlight class="normal"></highlight></codeline>
-<codeline lineno="362"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/tipsy.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/toomre_8_h.xml b/doxyxml/toomre_8_h.xml
deleted file mode 100644
index 8700509..0000000
--- a/doxyxml/toomre_8_h.xml
+++ /dev/null
@@ -1,215 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="toomre_8_h" kind="file" language="C++">
-    <compoundname>toomre.H</compoundname>
-    <includes refid="massmodel_8_h" local="no">massmodel.H</includes>
-    <incdepgraph>
-      <node id="20">
-        <label>DiskWithHalo.H</label>
-        <link refid="_disk_with_halo_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="9">
-        <label>MonotCubicInterpolator.H</label>
-        <link refid="_monot_cubic_interpolator_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-      </node>
-      <node id="19">
-        <label>QPDistF.H</label>
-        <link refid="_q_p_dist_f_8_h"/>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="10" relation="include">
-        </childnode>
-        <childnode refid="2" relation="include">
-        </childnode>
-        <childnode refid="20" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-      </node>
-      <node id="14">
-        <label>gaussQ.H</label>
-        <link refid="gauss_q_8_h"/>
-        <childnode refid="15" relation="include">
-        </childnode>
-        <childnode refid="16" relation="include">
-        </childnode>
-        <childnode refid="17" relation="include">
-        </childnode>
-        <childnode refid="18" relation="include">
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-        <childnode refid="11" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-      </node>
-      <node id="7">
-        <label>interp.H</label>
-        <link refid="interp_8_h"/>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="8" relation="include">
-        </childnode>
-        <childnode refid="9" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>massmodel.H</label>
-        <link refid="massmodel_8_h"/>
-        <childnode refid="3" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="5" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="7" relation="include">
-        </childnode>
-        <childnode refid="12" relation="include">
-        </childnode>
-        <childnode refid="19" relation="include">
-        </childnode>
-      </node>
-      <node id="12">
-        <label>orbit.H</label>
-        <link refid="orbit_8_h"/>
-        <childnode refid="13" relation="include">
-        </childnode>
-        <childnode refid="4" relation="include">
-        </childnode>
-        <childnode refid="6" relation="include">
-        </childnode>
-        <childnode refid="14" relation="include">
-        </childnode>
-      </node>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/include/toomre.H</label>
-        <link refid="toomre_8_h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="6">
-        <label>Eigen/Eigen</label>
-      </node>
-      <node id="18">
-        <label>cstdlib</label>
-      </node>
-      <node id="8">
-        <label>deque</label>
-      </node>
-      <node id="13">
-        <label>functional</label>
-      </node>
-      <node id="16">
-        <label>iomanip</label>
-      </node>
-      <node id="15">
-        <label>iostream</label>
-      </node>
-      <node id="10">
-        <label>map</label>
-      </node>
-      <node id="4">
-        <label>memory</label>
-      </node>
-      <node id="5">
-        <label>random</label>
-      </node>
-      <node id="17">
-        <label>sstream</label>
-      </node>
-      <node id="11">
-        <label>string</label>
-      </node>
-      <node id="3">
-        <label>vector</label>
-      </node>
-    </incdepgraph>
-    <innerclass refid="class_toomre_disk" prot="public">ToomreDisk</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="comment">//<sp/>Toomre&apos;s<sp/>Model<sp/>1</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight><highlight class="comment">//<sp/>with<sp/>Kalnajs&apos;<sp/>m<sp/>distribution<sp/>function<sp/>derived<sp/>from<sp/>inverting<sp/>the</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="comment">//<sp/>defining<sp/>integral<sp/>equation<sp/>with<sp/>a<sp/>separable<sp/>form:<sp/>e^m<sp/>g(x)</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight><highlight class="comment">//</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight></codeline>
-<codeline lineno="7"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>_toomre_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_toomre_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="massmodel_8_h" kindref="compound">massmodel.H</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="11"><highlight class="normal"></highlight></codeline>
-<codeline lineno="12" refid="class_toomre_disk" refkind="compound"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_toomre_disk" kindref="compound">ToomreDisk</ref><sp/>:<sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal"><sp/><ref refid="class_axi_sym_model" kindref="compound">AxiSymModel</ref></highlight></codeline>
-<codeline lineno="13"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"></highlight><highlight class="keyword">private</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="16" refid="class_toomre_disk_1a9d7580dab4c228c9c3755cb04e4ef96c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a9d7580dab4c228c9c3755cb04e4ef96c" kindref="member">rmax</ref>;</highlight></codeline>
-<codeline lineno="17" refid="class_toomre_disk_1a469272b778c9ee335cc6875ccd310d8a" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a56328c4b5d591660377672fd1bfac47d" kindref="member">m</ref>,<sp/><ref refid="class_toomre_disk_1a469272b778c9ee335cc6875ccd310d8a" kindref="member">e</ref>,<sp/><ref refid="class_toomre_disk_1abe6049f2a900e335f90a1e2c5a515c82" kindref="member">x</ref>;</highlight></codeline>
-<codeline lineno="18" refid="class_toomre_disk_1a182d349b6f80d32d2699d9dde9bc026e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a182d349b6f80d32d2699d9dde9bc026e" kindref="member">p0</ref>,<sp/><ref refid="class_toomre_disk_1a4a3da429c6bf7a587b4798066f8e3503" kindref="member">p1</ref>,<sp/><ref refid="class_toomre_disk_1a37240312f7dd6309dd1e6f0a4140d0f8" kindref="member">p2</ref>;</highlight></codeline>
-<codeline lineno="19"><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_toomre_disk_1a567aec63e61798ae1c78a49726a44b73" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a567aec63e61798ae1c78a49726a44b73" kindref="member">pdist</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="21"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight></codeline>
-<codeline lineno="24" refid="class_toomre_disk_1aafe82b153aff0cfe826eb4f36629f4c5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keyword">inline</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1aafe82b153aff0cfe826eb4f36629f4c5" kindref="member">ToomreDisk</ref>(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>M=0,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>RMAX=1.0e6)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_toomre_disk_1a56328c4b5d591660377672fd1bfac47d" kindref="member">m</ref><sp/>=<sp/>M+1.0e-10;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_toomre_disk_1a9d7580dab4c228c9c3755cb04e4ef96c" kindref="member">rmax</ref><sp/>=<sp/>RMAX;</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="28"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="29"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;ToomreDisk&quot;</highlight><highlight class="normal">;<sp/>}</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="31"><highlight class="normal"></highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="33"><highlight class="normal"></highlight></codeline>
-<codeline lineno="34" refid="class_toomre_disk_1abd9e9fd57a718ebd226cad28ef8ec16f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1abd9e9fd57a718ebd226cad28ef8ec16f" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>1.0<sp/>-<sp/>1.0/sqrt(1.0<sp/>+<sp/>r*r);}</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"></highlight></codeline>
-<codeline lineno="36" refid="class_toomre_disk_1a996ec7e47da7a906e5c1e0c4e2e78b03" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a996ec7e47da7a906e5c1e0c4e2e78b03" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>pow(1.0<sp/>+<sp/>r*r,<sp/>-1.5)/(2.0*M_PI);}</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"></highlight></codeline>
-<codeline lineno="38" refid="class_toomre_disk_1af6ef847ee8ab0d15bff484312666b1d9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1af6ef847ee8ab0d15bff484312666b1d9" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-1.0/sqrt(1.0<sp/>+<sp/>r*r);<sp/>}</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"></highlight></codeline>
-<codeline lineno="40" refid="class_toomre_disk_1a7bb3656f2d98532b4d5e21d6deafa29c" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a7bb3656f2d98532b4d5e21d6deafa29c" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>r*pow(1.0<sp/>+<sp/>r*r,<sp/>-1.5);<sp/>}</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"></highlight></codeline>
-<codeline lineno="42" refid="class_toomre_disk_1a1236638ac1c70ce8035eeac2765e5570" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a1236638ac1c70ce8035eeac2765e5570" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>(1.0<sp/>-<sp/>2.0*r*r)*</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pow(1.0<sp/>+<sp/>r*r,<sp/>-2.5);<sp/>}</highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45" refid="class_toomre_disk_1ac1b77abe27a20857942c732aeb4477ca" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1ac1b77abe27a20857942c732aeb4477ca" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/>{</highlight></codeline>
-<codeline lineno="46"><highlight class="normal"><sp/><sp/><sp/><sp/>ur<sp/>=<sp/>1.0/sqrt(1.0<sp/>+<sp/>r*r);</highlight></codeline>
-<codeline lineno="47"><highlight class="normal"><sp/><sp/><sp/><sp/>dur<sp/>=<sp/>r*ur*ur*ur;</highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/>ur<sp/>*=<sp/>-1.0;</highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Addiional<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_toomre_disk_1a3400c0f943bbe199daf4513cea71c7e8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a3400c0f943bbe199daf4513cea71c7e8" kindref="member">get_min_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;<sp/>}</highlight></codeline>
-<codeline lineno="54" refid="class_toomre_disk_1a6f639e731e0523a4e7c1f49645f6d557" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a6f639e731e0523a4e7c1f49645f6d557" kindref="member">get_max_radius</ref>(</highlight><highlight class="keywordtype">void</highlight><highlight class="normal">)<sp/>{<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a9d7580dab4c228c9c3755cb04e4ef96c" kindref="member">rmax</ref>;<sp/>}</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"></highlight></codeline>
-<codeline lineno="56" refid="class_toomre_disk_1ab269638253edb9e487a4e9eb3fdea6ac" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1ab269638253edb9e487a4e9eb3fdea6ac" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"></highlight></codeline>
-<codeline lineno="58" refid="class_toomre_disk_1ace07884f6db690401c212d56769c9c18" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1ace07884f6db690401c212d56769c9c18" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="59"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_toomre_disk_1af10b8224ec33787b20677c7565a02332" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1af10b8224ec33787b20677c7565a02332" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="62" refid="class_toomre_disk_1a16e321a4cdfdad113c0fc816ac19383d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_toomre_disk_1a16e321a4cdfdad113c0fc816ac19383d" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L);</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"></highlight></codeline>
-<codeline lineno="64"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="66"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/toomre.H"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/utils_2_analysis_2_particle_8_h.xml b/doxyxml/utils_2_analysis_2_particle_8_h.xml
deleted file mode 100644
index 453e036..0000000
--- a/doxyxml/utils_2_analysis_2_particle_8_h.xml
+++ /dev/null
@@ -1,37 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="utils_2_analysis_2_particle_8_h" kind="file" language="C++">
-    <compoundname>Particle.h</compoundname>
-    <innerclass refid="class_particle" prot="public">Particle</innerclass>
-    <briefdescription>
-    </briefdescription>
-    <detaileddescription>
-    </detaileddescription>
-    <programlisting>
-<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>Particle_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>Particle_H</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="3"><highlight class="normal"></highlight></codeline>
-<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>_REDUCED</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="5"><highlight class="normal"></highlight></codeline>
-<codeline lineno="6"><highlight class="normal"></highlight><highlight class="keyword">class<sp/></highlight><highlight class="normal"><ref refid="class_particle" kindref="compound">Particle</ref><sp/></highlight></codeline>
-<codeline lineno="7"><highlight class="normal">{</highlight></codeline>
-<codeline lineno="8"><highlight class="normal"><sp/></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="9"><highlight class="normal"></highlight></codeline>
-<codeline lineno="10"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a01205d006724dc26a6f49758f2722382" kindref="member">level</ref>;</highlight></codeline>
-<codeline lineno="11"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1ae6d46dc24a6666d526f211151fecca5f" kindref="member">mass</ref>;</highlight></codeline>
-<codeline lineno="12"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a3606e8a85c0b5ef30d7cf2777907e58e" kindref="member">pos</ref>[3];</highlight></codeline>
-<codeline lineno="13"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a13bd0267040135a338f62130ca1614d6" kindref="member">vel</ref>[3];</highlight></codeline>
-<codeline lineno="14"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">long</highlight><highlight class="normal"><sp/><ref refid="class_particle_1a041051e4763a83554abed7304dfda4a7" kindref="member">indx</ref>;</highlight></codeline>
-<codeline lineno="15"><highlight class="normal"></highlight></codeline>
-<codeline lineno="16"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Constructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="17" refid="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_1a40f4c7e248029d72e7714b7802d5e5e1" kindref="member">Particle</ref>();</highlight></codeline>
-<codeline lineno="18"><highlight class="normal"></highlight></codeline>
-<codeline lineno="19"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Copy<sp/>constructor</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="20" refid="class_particle_1a65da555cae2b76c9a6476797f3bbec14" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_particle_1a65da555cae2b76c9a6476797f3bbec14" kindref="member">Particle</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/><ref refid="class_particle" kindref="compound">Particle</ref><sp/>&amp;p);</highlight></codeline>
-<codeline lineno="21"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="22"><highlight class="normal"></highlight></codeline>
-<codeline lineno="23"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/utils/Analysis/Particle.h"/>
-  </compounddef>
-</doxygen>
diff --git a/doxyxml/utils_2_i_cs_2exp__thread_8h.xml b/doxyxml/utils_2_i_cs_2exp__thread_8h.xml
deleted file mode 100644
index a8fc326..0000000
--- a/doxyxml/utils_2_i_cs_2exp__thread_8h.xml
+++ /dev/null
@@ -1,113 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
-<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.9.8" xml:lang="en-US">
-  <compounddef id="utils_2_i_cs_2exp__thread_8h" kind="file" language="C++">
-    <compoundname>exp_thread.h</compoundname>
-    <includes local="no">pthread.h</includes>
-    <incdepgraph>
-      <node id="1">
-        <label>/home/weinberg/Projects/EXP/utils/ICs/exp_thread.h</label>
-        <link refid="utils_2_i_cs_2exp__thread_8h"/>
-        <childnode refid="2" relation="include">
-        </childnode>
-      </node>
-      <node id="2">
-        <label>pthread.h</label>
-      </node>
-    </incdepgraph>
-    <sectiondef kind="func">
-      <memberdef kind="function" id="utils_2_i_cs_2exp__thread_8h_1ae48298aaec9b7e7d899fa8c845967532" prot="public" static="no" const="no" explicit="no" inline="no" virt="non-virtual">
-        <type>void</type>
-        <definition>void exp_thread_fork</definition>
-        <argsstring>(void *(*func)(void *), char *caller)</argsstring>
-        <name>exp_thread_fork</name>
-        <param>
-          <type>void *(*)(void *)</type>
-          <declname>func</declname>
-        </param>
-        <param>
-          <type>char *</type>
-          <declname>caller</declname>
-        </param>
-        <briefdescription>
-        </briefdescription>
-        <detaileddescription>
-        </detaileddescription>
-        <inbodydescription>
-        </inbodydescription>
-        <location file="/home/weinberg/Projects/EXP/utils/ICs/exp_thread.h" line="8" column="6" declfile="/home/weinberg/Projects/EXP/utils/ICs/exp_thread.h" declline="8" declcolumn="6"/>
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diff --git a/doxyxml/utils_2_phase_space_2tipsydefs_8h.xml b/doxyxml/utils_2_phase_space_2tipsydefs_8h.xml
deleted file mode 100644
index 21d73dc..0000000
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diff --git a/doxyxml/version_8h.xml b/doxyxml/version_8h.xml
deleted file mode 100644
index 3f349be..0000000
--- a/doxyxml/version_8h.xml
+++ /dev/null
@@ -1,35 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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diff --git a/doxyxml/write_p_v_d_8_h.xml b/doxyxml/write_p_v_d_8_h.xml
deleted file mode 100644
index 6498e19..0000000
--- a/doxyxml/write_p_v_d_8_h.xml
+++ /dev/null
@@ -1,91 +0,0 @@
-<?xml version='1.0' encoding='UTF-8' standalone='no'?>
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diff --git a/doxyxml/xml.xsd b/doxyxml/xml.xsd
deleted file mode 100644
index 9f80fe1..0000000
--- a/doxyxml/xml.xsd
+++ /dev/null
@@ -1,23 +0,0 @@
-<?xml version='1.0'?>
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diff --git a/doxyxml/zang_8_h.xml b/doxyxml/zang_8_h.xml
deleted file mode 100644
index 66ddc58..0000000
--- a/doxyxml/zang_8_h.xml
+++ /dev/null
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-<codeline lineno="14" refid="class_zang_disk_1a276a5d73a1ec684b6baa4710aab83a40" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a276a5d73a1ec684b6baa4710aab83a40" kindref="member">norm</ref><sp/>=<sp/>1.0;</highlight></codeline>
-<codeline lineno="15" refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>;</highlight></codeline>
-<codeline lineno="16" refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" kindref="member">F</ref>;</highlight></codeline>
-<codeline lineno="17"><highlight class="normal"></highlight></codeline>
-<codeline lineno="18" refid="class_zang_disk_1a13ac8b8403794617d699472dd933ee24" refkind="member"><highlight class="normal"><sp/><sp/>std::vector&lt;double&gt;<sp/><ref refid="class_zang_disk_1a6a610eb74336dd4c3898a40b4eb0120b" kindref="member">Z</ref>,<sp/><ref refid="class_zang_disk_1a13ac8b8403794617d699472dd933ee24" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="19" refid="class_zang_disk_1a2df990a29246c1a3eb5233e6e22608c8" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a2df990a29246c1a3eb5233e6e22608c8" kindref="member">compute_norm</ref>();</highlight></codeline>
-<codeline lineno="20"><highlight class="normal"></highlight></codeline>
-<codeline lineno="22" refid="class_zang_disk_1a2c7d653d4969a09a92f4b64e0d1a50ab" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a2c7d653d4969a09a92f4b64e0d1a50ab" kindref="member">drdz</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>x)</highlight></codeline>
-<codeline lineno="23"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="24"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>ra<sp/>=<sp/>x/<ref refid="class_zang_disk_1adfcec9163aa3c94d84fcacbb9fcd9ea7" kindref="member">a</ref>,<sp/>faca<sp/>=<sp/>pow(x/<ref refid="class_zang_disk_1adfcec9163aa3c94d84fcacbb9fcd9ea7" kindref="member">a</ref>,<sp/><ref refid="class_zang_disk_1a95716d04649cfb816139557160711840" kindref="member">nu</ref>);</highlight></codeline>
-<codeline lineno="25"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1adfcec9163aa3c94d84fcacbb9fcd9ea7" kindref="member">a</ref><sp/>*<sp/>pow(ra,<sp/>1.0<sp/>-<sp/><ref refid="class_zang_disk_1a95716d04649cfb816139557160711840" kindref="member">nu</ref>)<sp/>*<sp/>(faca<sp/>+<sp/>1.0)*(faca<sp/>+<sp/>1.0)/<ref refid="class_zang_disk_1a95716d04649cfb816139557160711840" kindref="member">nu</ref>;</highlight></codeline>
-<codeline lineno="26"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="27"><highlight class="normal"></highlight></codeline>
-<codeline lineno="28"><highlight class="normal"></highlight></codeline>
-<codeline lineno="29"><highlight class="normal"></highlight><highlight class="keyword">public</highlight><highlight class="normal">:</highlight></codeline>
-<codeline lineno="30"><highlight class="normal"></highlight></codeline>
-<codeline lineno="31" refid="class_zang_disk_1a9863b21a361941c03421696e7918ea52" refkind="member"><highlight class="normal"><sp/><sp/><ref refid="class_zang_disk_1a9863b21a361941c03421696e7918ea52" kindref="member">ZangDisk</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Mass,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>A,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>Rcut,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>N,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a13ac8b8403794617d699472dd933ee24" kindref="member">M</ref>)</highlight></codeline>
-<codeline lineno="32"><highlight class="normal"><sp/><sp/>{</highlight></codeline>
-<codeline lineno="33"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_zang_disk_1a5b08cd80b1c0261acb6a94e3f6ec323d" kindref="member">mass</ref><sp/>=<sp/>Mass;</highlight></codeline>
-<codeline lineno="34"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_zang_disk_1adfcec9163aa3c94d84fcacbb9fcd9ea7" kindref="member">a</ref><sp/><sp/><sp/><sp/>=<sp/>A;</highlight></codeline>
-<codeline lineno="35"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_zang_disk_1ae88589238164a361b46f617a8f4c55a0" kindref="member">c</ref><sp/><sp/><sp/><sp/>=<sp/>Rcut;</highlight></codeline>
-<codeline lineno="36"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_zang_disk_1a95716d04649cfb816139557160711840" kindref="member">nu</ref><sp/><sp/><sp/>=<sp/>N;</highlight></codeline>
-<codeline lineno="37"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_zang_disk_1a53669491b3cf485d69cd572e0cf68bc1" kindref="member">mu</ref><sp/><sp/><sp/>=<sp/><ref refid="class_zang_disk_1a13ac8b8403794617d699472dd933ee24" kindref="member">M</ref>;</highlight></codeline>
-<codeline lineno="38"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1a80ab2b1813fdbbaf30f70d1089f2316d" kindref="member">dim</ref><sp/><sp/>=<sp/>2;</highlight></codeline>
-<codeline lineno="39"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="40"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_axi_sym_model_1a71a6a479380a41b28b633b1252550a7c" kindref="member">dist_defined</ref><sp/>=<sp/></highlight><highlight class="keyword">true</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="41"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_mass_model_1acf360c000464aca6299bc47894672d70" kindref="member">ModelID</ref><sp/>=<sp/></highlight><highlight class="stringliteral">&quot;ZangDisk&quot;</highlight><highlight class="normal">;</highlight></codeline>
-<codeline lineno="42"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="43"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/></highlight></codeline>
-<codeline lineno="44"><highlight class="normal"></highlight></codeline>
-<codeline lineno="45"><highlight class="normal"><sp/><sp/></highlight><highlight class="comment">//<sp/>Required<sp/>member<sp/>functions</highlight><highlight class="normal"></highlight></codeline>
-<codeline lineno="46"><highlight class="normal"></highlight></codeline>
-<codeline lineno="47" refid="class_zang_disk_1a229046b198a9ffd95baefc88e9388eb9" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a229046b198a9ffd95baefc88e9388eb9" kindref="member">get_mass</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="48"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>rot*r;<sp/></highlight></codeline>
-<codeline lineno="49"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="50"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="51"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="52"><highlight class="normal"></highlight></codeline>
-<codeline lineno="53" refid="class_zang_disk_1a5c21ded7c8685dfce4a2d70fa23a4550" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a5c21ded7c8685dfce4a2d70fa23a4550" kindref="member">get_density</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="54"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>rot/(2.0*M_PI*r);</highlight></codeline>
-<codeline lineno="55"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="56"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="57"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="58"><highlight class="normal"></highlight></codeline>
-<codeline lineno="60" refid="class_zang_disk_1a287c37a90ab8b8c4f4ee7972274e624e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a287c37a90ab8b8c4f4ee7972274e624e" kindref="member">get_pot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="61"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>rot*log(r);</highlight></codeline>
-<codeline lineno="62"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="63"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="64"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="65"><highlight class="normal"></highlight></codeline>
-<codeline lineno="67" refid="class_zang_disk_1acde671d69e89cd829f4bd824c22e2a0f" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1acde671d69e89cd829f4bd824c22e2a0f" kindref="member">get_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="68"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>rot/r;</highlight></codeline>
-<codeline lineno="69"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="70"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="71"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="72"><highlight class="normal"></highlight></codeline>
-<codeline lineno="74" refid="class_zang_disk_1ad1bdf4b87f33317d47f642738fa58966" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1ad1bdf4b87f33317d47f642738fa58966" kindref="member">get_dpot2</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r)<sp/>{</highlight></codeline>
-<codeline lineno="75"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-rot/(r*r);</highlight></codeline>
-<codeline lineno="76"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="77"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0;</highlight></codeline>
-<codeline lineno="78"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="79"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="80" refid="class_zang_disk_1af2038b4bef8b0b974a9a670b619ba0a7" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1af2038b4bef8b0b974a9a670b619ba0a7" kindref="member">get_pot_dpot</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>r,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;ur,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>&amp;dur)<sp/>{</highlight></codeline>
-<codeline lineno="81"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(r&gt;0.0)<sp/>{ur<sp/>=<sp/>rot*log(r);<sp/>dur<sp/>=<sp/>rot/r;}</highlight></codeline>
-<codeline lineno="82"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">else</highlight><highlight class="normal"><sp/><ref refid="class_mass_model_1a6e55e3cb2647fcc4840e969768930b9f" kindref="member">bomb</ref>(</highlight><highlight class="stringliteral">&quot;radius<sp/>cannot<sp/>be<sp/>zero!&quot;</highlight><highlight class="normal">);</highlight></codeline>
-<codeline lineno="83"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="84"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="86" refid="class_zang_disk_1af60fb96388f334a4cd4bad04d2e3f0d5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">void</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1af60fb96388f334a4cd4bad04d2e3f0d5" kindref="member">setup_df</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>sigma)<sp/>{<sp/></highlight></codeline>
-<codeline lineno="87"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref><sp/>=<sp/>sigma*sigma;</highlight></codeline>
-<codeline lineno="88"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref><sp/>=<sp/>rot/<ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref><sp/>-<sp/>1.0;</highlight></codeline>
-<codeline lineno="89"><highlight class="normal"><sp/><sp/><sp/><sp/><ref refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" kindref="member">F</ref><sp/>=<sp/>rot/(4.0*M_PI)<sp/>/<sp/>(<sp/>sqrt(M_PI)<sp/>*<sp/></highlight></codeline>
-<codeline lineno="90"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/>exp(lgamma(0.5*(<ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>+1.0))<sp/>+<sp/>(2.0<sp/>+<sp/><ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>)*log(sigma)<sp/>+<sp/>0.5*<ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>*log(2.0))<sp/>);</highlight></codeline>
-<codeline lineno="91"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="92"><highlight class="normal"></highlight></codeline>
-<codeline lineno="94" refid="class_zang_disk_1aa02e1cde2307d39a49f01005f95800c5" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1aa02e1cde2307d39a49f01005f95800c5" kindref="member">distf</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="95"><highlight class="normal"><sp/><sp/><sp/><sp/>L<sp/>=<sp/>fabs(L);</highlight></codeline>
-<codeline lineno="96"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(L==0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="97"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" kindref="member">F</ref>*<sp/>pow(L,<sp/><ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>)<sp/>*<sp/>exp(-E/<ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref>)<sp/>/<sp/>(1.0<sp/>+<sp/>pow(Li/L,<sp/>ZN))<sp/>/<sp/>(1.0<sp/>+<sp/>pow(L/Lo,<sp/>ZM));</highlight></codeline>
-<codeline lineno="98"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="99"><highlight class="normal"></highlight></codeline>
-<codeline lineno="100" refid="class_zang_disk_1a4861ccfe9095adf5f3027136791b2f1e" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a4861ccfe9095adf5f3027136791b2f1e" kindref="member">dfde</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="101"><highlight class="normal"><sp/><sp/><sp/><sp/>L<sp/>=<sp/>fabs(L);</highlight></codeline>
-<codeline lineno="102"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(L==0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="103"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>-<ref refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" kindref="member">F</ref>*pow(L,<sp/><ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>)<sp/>*<sp/>exp(-E/<ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref>)/<ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref>;</highlight></codeline>
-<codeline lineno="104"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="105"><highlight class="normal"></highlight></codeline>
-<codeline lineno="106" refid="class_zang_disk_1a0529f2413ec4eff191d2a2b9f7093bc4" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a0529f2413ec4eff191d2a2b9f7093bc4" kindref="member">dfdl</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="107"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/>sgn=1;</highlight></codeline>
-<codeline lineno="108"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(L&lt;0)<sp/>{sgn=-1;<sp/>L<sp/>*=<sp/>sgn;}</highlight></codeline>
-<codeline lineno="109"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(L==0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="110"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>*<ref refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" kindref="member">F</ref>*pow(L,<sp/><ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>-1.0)<sp/>*<sp/>exp(-E/<ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref>)<sp/>*<sp/>sgn;</highlight></codeline>
-<codeline lineno="111"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="112"><highlight class="normal"><sp/><sp/></highlight></codeline>
-<codeline lineno="113" refid="class_zang_disk_1a15a3323070792f35642eb36bd4490b2d" refkind="member"><highlight class="normal"><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a15a3323070792f35642eb36bd4490b2d" kindref="member">d2fde2</ref>(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>E,<sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>L)<sp/>{</highlight></codeline>
-<codeline lineno="114"><highlight class="normal"><sp/><sp/><sp/><sp/>L<sp/>=<sp/>fabs(L);</highlight></codeline>
-<codeline lineno="115"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">if</highlight><highlight class="normal"><sp/>(L&lt;=0.0)<sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/>0.0;</highlight></codeline>
-<codeline lineno="116"><highlight class="normal"><sp/><sp/><sp/><sp/></highlight><highlight class="keywordflow">return</highlight><highlight class="normal"><sp/><ref refid="class_zang_disk_1a9a78c875f3624562859d0edbe5e3b4c2" kindref="member">F</ref>*pow(L,<sp/><ref refid="class_zang_disk_1af4a083497329c85214cda0a4becab753" kindref="member">q</ref>)<sp/>*<sp/>exp(-E/<ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref>)/<ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref>/<ref refid="class_zang_disk_1ac0382c24da3d4056cb662e28b607c538" kindref="member">sig2</ref>;</highlight></codeline>
-<codeline lineno="117"><highlight class="normal"><sp/><sp/>}</highlight></codeline>
-<codeline lineno="118"><highlight class="normal"></highlight></codeline>
-<codeline lineno="119"><highlight class="normal">};</highlight></codeline>
-<codeline lineno="120"><highlight class="normal"></highlight></codeline>
-<codeline lineno="121"><highlight class="normal"></highlight></codeline>
-<codeline lineno="122"><highlight class="normal"></highlight></codeline>
-<codeline lineno="123"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
-    </programlisting>
-    <location file="/home/weinberg/Projects/EXP/include/zang.H"/>
-  </compounddef>
-</doxygen>

From 0749d058e08fb2e57e403823f7ae847a3d96491c Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Wed, 23 Jul 2025 19:49:44 -0400
Subject: [PATCH 06/37] Enable minimal pyEXP build

---
 .readthedocs.yaml |  8 +++++++-
 conf.py           | 19 ++++++++++++++++---
 2 files changed, 23 insertions(+), 4 deletions(-)

diff --git a/.readthedocs.yaml b/.readthedocs.yaml
index ce18fa5..2eccd56 100644
--- a/.readthedocs.yaml
+++ b/.readthedocs.yaml
@@ -6,7 +6,7 @@ version: 2
 
 # Set the OS, Python version and other tools you might need
 build:
-  os: ubuntu-22.04
+  os: ubuntu-24.04
   tools:
     python: "3.11"
     # You can also specify other tool versions:
@@ -15,6 +15,12 @@ build:
     # golang: "1.20"
   apt_packages:
     - graphviz
+    - libeigen3-dev
+    - libfftw3-dev
+    - libhdf5-dev
+    - libopenmpi-dev
+    - openmpi-bin
+    - openmpi-common
 
 # Build documentation in the "docs/" directory with Sphinx
 sphinx:
diff --git a/conf.py b/conf.py
index 82c2ffc..aa47b8f 100644
--- a/conf.py
+++ b/conf.py
@@ -14,6 +14,9 @@
 doxyfile  = "exp.cfg.breathe"
 doxy_dir  = "doc"
 
+# Cache the current working directory
+build_dir = os.getcwd()
+
 # Clone the repository if it doesn't exist
 if not os.path.exists(clone_dir):
     subprocess.run(["git", "clone", repo_url, clone_dir], check=True)
@@ -26,13 +29,23 @@
 # Ensure Doxygen is installed and its executable is in your PATH
 subprocess.run(["doxygen", doxyfile], check=True)
 
-# -- Project information -----------------------------------------------------
-# https://www.sphinx-doc.org/en/master/usage/configuration.html#project-information
+# Build pyEXP to populate Python API documenation
+os.chdir('..')
+if not os.path.exists('build'):
+    subprocess.run(["mkdir", "build"], check=True)
+os.chdir('build')
+subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev", ".."])
+subprocess.run(["make", "-j8", "install"])
+
+# Return to top level
+os.chdir(build_dir)
 
+# -- Project information -----------------------------------------------------
+#
 project = 'EXP'
 copyright = '2023-2025, EXP-code collaboration'
 author = 'EXP-code collaboration'
-release = '0.16'
+release = '0.17'
 version = '7.x'
 
 # -- General configuration ---------------------------------------------------

From a873085c7217f039eb6c723814c045150147f0ca Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Wed, 23 Jul 2025 20:00:46 -0400
Subject: [PATCH 07/37] Add some missing packages

---
 .readthedocs.yaml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/.readthedocs.yaml b/.readthedocs.yaml
index 2eccd56..240cee8 100644
--- a/.readthedocs.yaml
+++ b/.readthedocs.yaml
@@ -15,6 +15,8 @@ build:
     # golang: "1.20"
   apt_packages:
     - graphviz
+    - cmake
+    - make
     - libeigen3-dev
     - libfftw3-dev
     - libhdf5-dev

From d2a4dae6972be0f54893fa62b1a6931a233b199f Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Wed, 23 Jul 2025 20:46:10 -0400
Subject: [PATCH 08/37] Add some some print statements to debug weird missing
 build

---
 conf.py | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/conf.py b/conf.py
index aa47b8f..5d88fbb 100644
--- a/conf.py
+++ b/conf.py
@@ -31,11 +31,17 @@
 
 # Build pyEXP to populate Python API documenation
 os.chdir('..')
+print('My current directory is:', os.getcwd())
+print('Beginning pyEXP build')
 if not os.path.exists('build'):
+    print('Making build directory')
     subprocess.run(["mkdir", "build"], check=True)
 os.chdir('build')
+print('My current directory is:', os.getcwd())
+print('Beginning cmake')
 subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev", ".."])
 subprocess.run(["make", "-j8", "install"])
+print('Finished cmake')
 
 # Return to top level
 os.chdir(build_dir)

From b921e425a0143a56e5cc44df5348f745cc658593 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Wed, 23 Jul 2025 21:36:04 -0400
Subject: [PATCH 09/37] Attempt to adjust the install location in the
 readthedocs build

---
 .readthedocs.yaml    | 2 ++
 conf.py              | 2 +-
 topics/bfetheory.rst | 1 -
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.readthedocs.yaml b/.readthedocs.yaml
index 240cee8..cac8827 100644
--- a/.readthedocs.yaml
+++ b/.readthedocs.yaml
@@ -41,5 +41,7 @@ sphinx:
 # to build your documentation
 # See https://docs.readthedocs.io/en/stable/guides/reproducible-builds.html
 python:
+  build:
+    LD_LIBRARY_PATH=$READTHEDOCS_OUTPUT/lib:$LD_LIBRARY_PATH
   install:
     - requirements: requirements.txt
diff --git a/conf.py b/conf.py
index 5d88fbb..93abdf7 100644
--- a/conf.py
+++ b/conf.py
@@ -39,7 +39,7 @@
 os.chdir('build')
 print('My current directory is:', os.getcwd())
 print('Beginning cmake')
-subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev", ".."])
+subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -DCMAKE_INSTALL=$READTHEDOCS_OUTPUT/lib -Wno-dev", ".."])
 subprocess.run(["make", "-j8", "install"])
 print('Finished cmake')
 
diff --git a/topics/bfetheory.rst b/topics/bfetheory.rst
index bb02d25..9040899 100644
--- a/topics/bfetheory.rst
+++ b/topics/bfetheory.rst
@@ -183,7 +183,6 @@ where :math:`R, z` are the radial and vertical cylindrical
 coordinates.  The second equation shows the approximation for
 :math:`N` particles where :math:`\sum_i m_i = \int \rho(R, z)d^3x`.
 
-
 The covariance of the coefficient given the density :math:`\rho(R,
 z)`, :math:`\mbox{cov}(\mathbf{a})`, is constructed similarly. For
 each azimuthal harmonic :math:`m`, all spherical terms :math:`l\ge m`

From 522dc29a81f52c83c133e7fb9e377255cdf85e7a Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Wed, 23 Jul 2025 22:47:45 -0400
Subject: [PATCH 10/37] Add build directory to Python pah

---
 .readthedocs.yaml | 2 --
 conf.py           | 7 ++++++-
 2 files changed, 6 insertions(+), 3 deletions(-)

diff --git a/.readthedocs.yaml b/.readthedocs.yaml
index cac8827..240cee8 100644
--- a/.readthedocs.yaml
+++ b/.readthedocs.yaml
@@ -41,7 +41,5 @@ sphinx:
 # to build your documentation
 # See https://docs.readthedocs.io/en/stable/guides/reproducible-builds.html
 python:
-  build:
-    LD_LIBRARY_PATH=$READTHEDOCS_OUTPUT/lib:$LD_LIBRARY_PATH
   install:
     - requirements: requirements.txt
diff --git a/conf.py b/conf.py
index 93abdf7..a138643 100644
--- a/conf.py
+++ b/conf.py
@@ -40,12 +40,17 @@
 print('My current directory is:', os.getcwd())
 print('Beginning cmake')
 subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -DCMAKE_INSTALL=$READTHEDOCS_OUTPUT/lib -Wno-dev", ".."])
-subprocess.run(["make", "-j8", "install"])
+subprocess.run(["make", "-j8"])
 print('Finished cmake')
 
 # Return to top level
 os.chdir(build_dir)
 
+my_module_path = os.path.join(build_dir, 'exp_repo/build/pyEXP')
+
+# Add 'my_module_path' to the beginning of sys.path
+sys.path.insert(0, my_modules_path)
+
 # -- Project information -----------------------------------------------------
 #
 project = 'EXP'

From fffb6f5bb1ec704e043ab4d4eb93eb91eaec73c7 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Wed, 23 Jul 2025 22:48:36 -0400
Subject: [PATCH 11/37] Remove install directory from cmake command

---
 conf.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conf.py b/conf.py
index a138643..b6ac20d 100644
--- a/conf.py
+++ b/conf.py
@@ -39,7 +39,7 @@
 os.chdir('build')
 print('My current directory is:', os.getcwd())
 print('Beginning cmake')
-subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -DCMAKE_INSTALL=$READTHEDOCS_OUTPUT/lib -Wno-dev", ".."])
+subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev", ".."])
 subprocess.run(["make", "-j8"])
 print('Finished cmake')
 

From 0c84e628e1d1c8622f28bd403009f6e9fa838d85 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Wed, 23 Jul 2025 23:06:21 -0400
Subject: [PATCH 12/37] Forgot to import sys

---
 conf.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conf.py b/conf.py
index b6ac20d..f68f0d7 100644
--- a/conf.py
+++ b/conf.py
@@ -4,7 +4,7 @@
 # https://www.sphinx-doc.org/en/master/usage/configuration.html
 
 # -- Generate doxygen xml prior to build --------------------------------------
-import os
+import os, sys
 import subprocess
 
 # Define the repository URL and target directory

From e890a44d8be83b57668df0588baa754fe080fcde Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 08:47:36 -0400
Subject: [PATCH 13/37] Remove print statements

---
 conf.py | 6 ------
 1 file changed, 6 deletions(-)

diff --git a/conf.py b/conf.py
index f68f0d7..c2446d0 100644
--- a/conf.py
+++ b/conf.py
@@ -31,17 +31,11 @@
 
 # Build pyEXP to populate Python API documenation
 os.chdir('..')
-print('My current directory is:', os.getcwd())
-print('Beginning pyEXP build')
 if not os.path.exists('build'):
-    print('Making build directory')
     subprocess.run(["mkdir", "build"], check=True)
 os.chdir('build')
-print('My current directory is:', os.getcwd())
-print('Beginning cmake')
 subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev", ".."])
 subprocess.run(["make", "-j8"])
-print('Finished cmake')
 
 # Return to top level
 os.chdir(build_dir)

From f6ea5ef8820fc3ac772ed7b21078e5e66bb011cc Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 12:06:03 -0400
Subject: [PATCH 14/37] Drop back to 22.04

---
 .readthedocs.yaml | 2 +-
 requirements.txt  | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/.readthedocs.yaml b/.readthedocs.yaml
index 240cee8..1ed7b53 100644
--- a/.readthedocs.yaml
+++ b/.readthedocs.yaml
@@ -6,7 +6,7 @@ version: 2
 
 # Set the OS, Python version and other tools you might need
 build:
-  os: ubuntu-24.04
+  os: ubuntu-22.04
   tools:
     python: "3.11"
     # You can also specify other tool versions:
diff --git a/requirements.txt b/requirements.txt
index 274eb3f..53ce838 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,4 +1,4 @@
-sphinx == 7.2.6
+sphinx == 8.1.3
 sphinx-rtd-theme == 1.3.0
 breathe == 4.35.0
 sphinx-copybutton == 0.5.1

From 8621e9a11bec085a13520b9d81ec4115596b8b69 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 12:26:16 -0400
Subject: [PATCH 15/37] Downgrade sphinx for 22.04

---
 requirements.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/requirements.txt b/requirements.txt
index 53ce838..274eb3f 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,4 +1,4 @@
-sphinx == 8.1.3
+sphinx == 7.2.6
 sphinx-rtd-theme == 1.3.0
 breathe == 4.35.0
 sphinx-copybutton == 0.5.1

From 4c77e179b67849e671207975f3546557d750f562 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 12:36:59 -0400
Subject: [PATCH 16/37] Hack to downgrade CMake requirement

---
 conf.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/conf.py b/conf.py
index c2446d0..f633bb0 100644
--- a/conf.py
+++ b/conf.py
@@ -34,6 +34,7 @@
 if not os.path.exists('build'):
     subprocess.run(["mkdir", "build"], check=True)
 os.chdir('build')
+subprocess.run(["sed", "-s/VERSION 3.25/VERSION 3.22/", "CMakeLists.txt"])
 subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev", ".."])
 subprocess.run(["make", "-j8"])
 

From 173f430a233294bfe4935ae880f5cba00c058615 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 12:57:33 -0400
Subject: [PATCH 17/37] Workaround for 22.04 CMake version check

---
 conf.py | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/conf.py b/conf.py
index f633bb0..3ed5e78 100644
--- a/conf.py
+++ b/conf.py
@@ -34,7 +34,10 @@
 if not os.path.exists('build'):
     subprocess.run(["mkdir", "build"], check=True)
 os.chdir('build')
-subprocess.run(["sed", "-s/VERSION 3.25/VERSION 3.22/", "CMakeLists.txt"])
+subprocess.run(["cp", "CMakeLists.txt", "CMakeLists.txt.orig"])
+foutput = open('CMakeLists.txt', 'w')
+subprocess.run(["sed", "-s/VERSION 3.25/VERSION 3.22/", "CMakeLists.txt.orig"], stdout=foutput)
+foutput.close()
 subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev", ".."])
 subprocess.run(["make", "-j8"])
 

From 5bff2d75daa22b0e571e2de07b58bf1a12bfd20d Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 13:28:08 -0400
Subject: [PATCH 18/37] Fix bugs in workaround

---
 conf.py | 10 ++++++----
 1 file changed, 6 insertions(+), 4 deletions(-)

diff --git a/conf.py b/conf.py
index 3ed5e78..272ef61 100644
--- a/conf.py
+++ b/conf.py
@@ -34,12 +34,14 @@
 if not os.path.exists('build'):
     subprocess.run(["mkdir", "build"], check=True)
 os.chdir('build')
-subprocess.run(["cp", "CMakeLists.txt", "CMakeLists.txt.orig"])
+subprocess.run(['cp', 'CMakeLists.txt', 'CMakeLists.txt.orig'])
+command_to_pipe = subprocess.Popen(['cat', 'CMakeLists.txt.orig'], stdout=subprocess.PIPE)
 foutput = open('CMakeLists.txt', 'w')
-subprocess.run(["sed", "-s/VERSION 3.25/VERSION 3.22/", "CMakeLists.txt.orig"], stdout=foutput)
+sed_command = subprocess.Popen(['sed', 's/VERSION 3.25/VERSION 3.22/'], stdin=command_to_pipe.stdout, stdout=foutput)
 foutput.close()
-subprocess.run(["cmake", "-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev", ".."])
-subprocess.run(["make", "-j8"])
+command_to_pipe.stdout.close()
+subprocess.run(['cmake', '-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev', '..'])
+subprocess.run(['make', '-j8'])
 
 # Return to top level
 os.chdir(build_dir)

From 98f50a6b43af56df825385966de868dfa59b80da Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 13:33:17 -0400
Subject: [PATCH 19/37] Another bug fix in workaround

---
 conf.py | 10 +++++++---
 1 file changed, 7 insertions(+), 3 deletions(-)

diff --git a/conf.py b/conf.py
index 272ef61..6acfde7 100644
--- a/conf.py
+++ b/conf.py
@@ -31,15 +31,19 @@
 
 # Build pyEXP to populate Python API documenation
 os.chdir('..')
-if not os.path.exists('build'):
-    subprocess.run(["mkdir", "build"], check=True)
-os.chdir('build')
+
+# Workaround for cmake version
 subprocess.run(['cp', 'CMakeLists.txt', 'CMakeLists.txt.orig'])
 command_to_pipe = subprocess.Popen(['cat', 'CMakeLists.txt.orig'], stdout=subprocess.PIPE)
 foutput = open('CMakeLists.txt', 'w')
 sed_command = subprocess.Popen(['sed', 's/VERSION 3.25/VERSION 3.22/'], stdin=command_to_pipe.stdout, stdout=foutput)
 foutput.close()
 command_to_pipe.stdout.close()
+
+# Make build directory
+if not os.path.exists('build'):
+    subprocess.run(["mkdir", "build"], check=True)
+os.chdir('build')
 subprocess.run(['cmake', '-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev', '..'])
 subprocess.run(['make', '-j8'])
 

From 5e8ab5cc4968572d2153cc932507590a278201ee Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 13:53:58 -0400
Subject: [PATCH 20/37] Fix typo in module string

---
 conf.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conf.py b/conf.py
index 6acfde7..b01f986 100644
--- a/conf.py
+++ b/conf.py
@@ -53,7 +53,7 @@
 my_module_path = os.path.join(build_dir, 'exp_repo/build/pyEXP')
 
 # Add 'my_module_path' to the beginning of sys.path
-sys.path.insert(0, my_modules_path)
+sys.path.insert(0, my_module_path)
 
 # -- Project information -----------------------------------------------------
 #

From 510b8f3cee4330a039b678bff404dc3b7c7d0f01 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 14:46:04 -0400
Subject: [PATCH 21/37] Added comments to conf.py.  Works locally but I can't
 get it to work in the readthedocs CI/CD.  Not sure what's up.

---
 conf.py | 23 ++++++++++++++++++-----
 1 file changed, 18 insertions(+), 5 deletions(-)

diff --git a/conf.py b/conf.py
index b01f986..ccd7c36 100644
--- a/conf.py
+++ b/conf.py
@@ -3,11 +3,13 @@
 # For the full list of built-in configuration values, see the documentation:
 # https://www.sphinx-doc.org/en/master/usage/configuration.html
 
-# -- Generate doxygen xml prior to build --------------------------------------
 import os, sys
 import subprocess
 
+# -- Generate doxygen xml prior to build --------------------------------------
+
 # Define the repository URL and target directory
+#
 repo_url  = "https://github.com/EXP-code/EXP.git"
 clone_dir = "exp_repo"
 branch    = "SLboundaries"
@@ -15,24 +17,30 @@
 doxy_dir  = "doc"
 
 # Cache the current working directory
+#
 build_dir = os.getcwd()
 
-# Clone the repository if it doesn't exist
+# Clone the EXP repository if it doesn't exist
+#
 if not os.path.exists(clone_dir):
     subprocess.run(["git", "clone", repo_url, clone_dir], check=True)
 
 # Move to source and get the desired branch
+#
 os.chdir(clone_dir)
 subprocess.run(["git", "checkout", branch])
 os.chdir(doxy_dir)
 
 # Ensure Doxygen is installed and its executable is in your PATH
+#
 subprocess.run(["doxygen", doxyfile], check=True)
 
 # Build pyEXP to populate Python API documenation
+#
 os.chdir('..')
 
 # Workaround for cmake version
+#
 subprocess.run(['cp', 'CMakeLists.txt', 'CMakeLists.txt.orig'])
 command_to_pipe = subprocess.Popen(['cat', 'CMakeLists.txt.orig'], stdout=subprocess.PIPE)
 foutput = open('CMakeLists.txt', 'w')
@@ -40,7 +48,8 @@
 foutput.close()
 command_to_pipe.stdout.close()
 
-# Make build directory
+# Make build directory and begin
+#
 if not os.path.exists('build'):
     subprocess.run(["mkdir", "build"], check=True)
 os.chdir('build')
@@ -48,14 +57,18 @@
 subprocess.run(['make', '-j8'])
 
 # Return to top level
+#
 os.chdir(build_dir)
 
-my_module_path = os.path.join(build_dir, 'exp_repo/build/pyEXP')
 
 # Add 'my_module_path' to the beginning of sys.path
+#
+my_module_path = os.path.join(build_dir, 'exp_repo/build/pyEXP')
 sys.path.insert(0, my_module_path)
 
-# -- Project information -----------------------------------------------------
+# Begin Sphinx configuration
+
+# -- project information -----------------------------------------------------
 #
 project = 'EXP'
 copyright = '2023-2025, EXP-code collaboration'

From fa9abed6105bfe7108379b24cac67313cbc107fd Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 19:10:09 -0400
Subject: [PATCH 22/37] Update conf.py for github action workflow

---
 .github/workflows/build_docs.yml | 39 ++++++++++++++++++++++++++++++++
 conf.py                          | 10 +-------
 2 files changed, 40 insertions(+), 9 deletions(-)
 create mode 100644 .github/workflows/build_docs.yml

diff --git a/.github/workflows/build_docs.yml b/.github/workflows/build_docs.yml
new file mode 100644
index 0000000..0ea82b5
--- /dev/null
+++ b/.github/workflows/build_docs.yml
@@ -0,0 +1,39 @@
+name: Build and Deploy Docs
+
+on:
+  push:
+    branches:
+      - main  # Trigger on pushes to the main branch
+
+jobs:
+  build:
+    runs-on: ubuntu-24.04  # Specify the operating system
+
+    steps:
+      - uses: actions/checkout@v4  # Checkout the repository
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.x'  # Specify your Python version
+      - name: Install dependencies
+        run: |
+          sudo apt-get update
+          sudo apt-get install -y build-essential libeigen3-dev libfftw3-dev libhdf5-dev libopenmpi-dev libomp-dev python3-numpy python3-venv doxygen graphviz cmake make pandoc
+          python3 -m venv .venv # Create a virtual environment
+          source .venv/bin/activate # Activate the environment
+          pip install sphinx sphinx-rtd-theme  # Install Sphinx and theme
+          pip install -r requirements.txt  # Install any additional dependencies (optional)
+      - name: Build Sphinx documentation
+        run: |
+          source .venv/bin/activate # Activate the environment
+          make html  # Build the HTML documentation
+      - name: Upload built documentation (optional)
+        uses: actions/upload-artifact@v4
+        with:
+          name: html-docs
+          path: _build/html  # Path to your built documentation
+      - name: Trigger Read the Docs build (using webhook)
+        run: |
+          # Replace with your actual Read the Docs webhook URL and token
+          curl -X POST -d "{}" ${{ secrets.RTDS_WEBHOOK_URL }} -H "Authorization: token ${{ secrets.RTDS_WEBHOOK_TOKEN }}"
+
diff --git a/conf.py b/conf.py
index ccd7c36..b2575fd 100644
--- a/conf.py
+++ b/conf.py
@@ -30,6 +30,7 @@
 os.chdir(clone_dir)
 subprocess.run(["git", "checkout", branch])
 os.chdir(doxy_dir)
+os.system("git submodule update --init --recursive")
 
 # Ensure Doxygen is installed and its executable is in your PATH
 #
@@ -39,15 +40,6 @@
 #
 os.chdir('..')
 
-# Workaround for cmake version
-#
-subprocess.run(['cp', 'CMakeLists.txt', 'CMakeLists.txt.orig'])
-command_to_pipe = subprocess.Popen(['cat', 'CMakeLists.txt.orig'], stdout=subprocess.PIPE)
-foutput = open('CMakeLists.txt', 'w')
-sed_command = subprocess.Popen(['sed', 's/VERSION 3.25/VERSION 3.22/'], stdin=command_to_pipe.stdout, stdout=foutput)
-foutput.close()
-command_to_pipe.stdout.close()
-
 # Make build directory and begin
 #
 if not os.path.exists('build'):

From bbba704cad5080ff22b8919214a8130e9c495ceb Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 19:30:00 -0400
Subject: [PATCH 23/37] Switch to push on Doxygen branch

---
 .github/workflows/build_docs.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/build_docs.yml b/.github/workflows/build_docs.yml
index 0ea82b5..46fc153 100644
--- a/.github/workflows/build_docs.yml
+++ b/.github/workflows/build_docs.yml
@@ -3,7 +3,7 @@ name: Build and Deploy Docs
 on:
   push:
     branches:
-      - main  # Trigger on pushes to the main branch
+      - Doxygen  # Trigger on pushes to the main branch
 
 jobs:
   build:

From c4ae04946d9b3985f1de65d2d2d08807d5b40254 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Thu, 24 Jul 2025 19:59:50 -0400
Subject: [PATCH 24/37] Added ipython

---
 .github/workflows/build_docs.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/build_docs.yml b/.github/workflows/build_docs.yml
index 46fc153..b0bd1a6 100644
--- a/.github/workflows/build_docs.yml
+++ b/.github/workflows/build_docs.yml
@@ -18,7 +18,7 @@ jobs:
       - name: Install dependencies
         run: |
           sudo apt-get update
-          sudo apt-get install -y build-essential libeigen3-dev libfftw3-dev libhdf5-dev libopenmpi-dev libomp-dev python3-numpy python3-venv doxygen graphviz cmake make pandoc
+          sudo apt-get install -y build-essential libeigen3-dev libfftw3-dev libhdf5-dev libopenmpi-dev libomp-dev python3-numpy python3-venv python3-ipython ipython3 doxygen graphviz cmake make pandoc
           python3 -m venv .venv # Create a virtual environment
           source .venv/bin/activate # Activate the environment
           pip install sphinx sphinx-rtd-theme  # Install Sphinx and theme

From 235f1fc29a8a66cca8790d56f072ca0002c15072 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 09:15:59 -0400
Subject: [PATCH 25/37] Try pushing to Github Pages

---
 .github/workflows/build_docs.yml | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/build_docs.yml b/.github/workflows/build_docs.yml
index 0ea82b5..601e462 100644
--- a/.github/workflows/build_docs.yml
+++ b/.github/workflows/build_docs.yml
@@ -32,8 +32,8 @@ jobs:
         with:
           name: html-docs
           path: _build/html  # Path to your built documentation
-      - name: Trigger Read the Docs build (using webhook)
-        run: |
-          # Replace with your actual Read the Docs webhook URL and token
-          curl -X POST -d "{}" ${{ secrets.RTDS_WEBHOOK_URL }} -H "Authorization: token ${{ secrets.RTDS_WEBHOOK_TOKEN }}"
-
+      - name: Deploy to github pages
+        uses: peaceiris/actions-gh-pages@v3  # Or other suitable deploy action
+        with:
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          publish_dir: _build/html

From 994d3b2bc84213ca741c277491e5f8f3c1ae1aa0 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 10:14:56 -0400
Subject: [PATCH 26/37] Remove ReadTheDocs trigger and publish to github pages

---
 .github/workflows/build_docs.yml | 14 +++++++++-----
 1 file changed, 9 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/build_docs.yml b/.github/workflows/build_docs.yml
index b0bd1a6..4add749 100644
--- a/.github/workflows/build_docs.yml
+++ b/.github/workflows/build_docs.yml
@@ -32,8 +32,12 @@ jobs:
         with:
           name: html-docs
           path: _build/html  # Path to your built documentation
-      - name: Trigger Read the Docs build (using webhook)
-        run: |
-          # Replace with your actual Read the Docs webhook URL and token
-          curl -X POST -d "{}" ${{ secrets.RTDS_WEBHOOK_URL }} -H "Authorization: token ${{ secrets.RTDS_WEBHOOK_TOKEN }}"
-
+      - name: Deploy to GitHub Pages
+        uses: peaceiris/actions-gh-pages@v3
+#        if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/main' }}
+        if: ${{ github.event_name == 'push' }}
+        with:
+          publish_branch: gh-pages
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          publish_dir: _build/
+          force_orphan: true

From 2b4455a22332615687e2595c6889a3d9d12f6d7c Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 10:37:55 -0400
Subject: [PATCH 27/37] Change subdirectory for pushing pages

---
 .github/workflows/build_docs.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/build_docs.yml b/.github/workflows/build_docs.yml
index 4add749..0331197 100644
--- a/.github/workflows/build_docs.yml
+++ b/.github/workflows/build_docs.yml
@@ -39,5 +39,5 @@ jobs:
         with:
           publish_branch: gh-pages
           github_token: ${{ secrets.GITHUB_TOKEN }}
-          publish_dir: _build/
+          publish_dir: _build/html
           force_orphan: true

From 72604f62c1e15fa7c70c59a8262e0082911f802c Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 10:53:33 -0400
Subject: [PATCH 28/37] Downgrade CMake requirements for readthedocs

---
 conf.py | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/conf.py b/conf.py
index b2575fd..16d7fcb 100644
--- a/conf.py
+++ b/conf.py
@@ -29,6 +29,11 @@
 #
 os.chdir(clone_dir)
 subprocess.run(["git", "checkout", branch])
+subprocess.run(["cp", "CMakeLists.txt", "CMakeLists.txt.orig"])
+fwrite = open("CMakeLists.txt", "w")
+subprocess.Popen(["sed", "-e", "s/VERSION 3.25/VERSION 3.22/", "CMakeLists.txt.orig"], stdout=fwrite)
+fwrite.close()
+subprocess.stdout.close()
 os.chdir(doxy_dir)
 os.system("git submodule update --init --recursive")
 

From 8cf1e135c4a70200ed2cc3f6a15b427248dc074a Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 10:59:28 -0400
Subject: [PATCH 29/37] Fix typo in subprocess

---
 conf.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/conf.py b/conf.py
index 16d7fcb..13d2b16 100644
--- a/conf.py
+++ b/conf.py
@@ -31,9 +31,9 @@
 subprocess.run(["git", "checkout", branch])
 subprocess.run(["cp", "CMakeLists.txt", "CMakeLists.txt.orig"])
 fwrite = open("CMakeLists.txt", "w")
-subprocess.Popen(["sed", "-e", "s/VERSION 3.25/VERSION 3.22/", "CMakeLists.txt.orig"], stdout=fwrite)
+pipe = subprocess.Popen(["sed", "-e", "s/VERSION 3.25/VERSION 3.22/", "CMakeLists.txt.orig"], stdout=fwrite)
+pipe.stdout.close()
 fwrite.close()
-subprocess.stdout.close()
 os.chdir(doxy_dir)
 os.system("git submodule update --init --recursive")
 

From e97bd891b0b362454741ef363298783ea9672209 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 11:04:25 -0400
Subject: [PATCH 30/37] Fix typo in subprocess, again

---
 conf.py | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

diff --git a/conf.py b/conf.py
index 13d2b16..87ec63a 100644
--- a/conf.py
+++ b/conf.py
@@ -30,10 +30,11 @@
 os.chdir(clone_dir)
 subprocess.run(["git", "checkout", branch])
 subprocess.run(["cp", "CMakeLists.txt", "CMakeLists.txt.orig"])
-fwrite = open("CMakeLists.txt", "w")
-pipe = subprocess.Popen(["sed", "-e", "s/VERSION 3.25/VERSION 3.22/", "CMakeLists.txt.orig"], stdout=fwrite)
-pipe.stdout.close()
-fwrite.close()
+command = ["sed", "-i", "-e", 's/VERSION 3.25/VERSION 3.22/g', "CMakeLists.txt"] 
+result = subprocess.run(command, capture_output=True, text=True, check=True)
+
+# Initialize submodules
+#
 os.chdir(doxy_dir)
 os.system("git submodule update --init --recursive")
 

From 5105d5c34edd1da70306641200be3b6c233a5c98 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 11:37:55 -0400
Subject: [PATCH 31/37] Try running on 24.04 at readthedocs

---
 .readthedocs.yaml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.readthedocs.yaml b/.readthedocs.yaml
index 1ed7b53..dd2bd05 100644
--- a/.readthedocs.yaml
+++ b/.readthedocs.yaml
@@ -6,9 +6,9 @@ version: 2
 
 # Set the OS, Python version and other tools you might need
 build:
-  os: ubuntu-22.04
+  os: ubuntu-24.04
   tools:
-    python: "3.11"
+    python: "3.12"
     # You can also specify other tool versions:
     # nodejs: "20"
     # rust: "1.70"

From dbedf2c3d371cf36a5279b020c1314da5834ea6a Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 11:53:27 -0400
Subject: [PATCH 32/37] Add some readthedocs conditionals

---
 conf.py      | 45 +++++++++++++++++++++++++++------------------
 pybind11.rst |  8 ++++++++
 2 files changed, 35 insertions(+), 18 deletions(-)

diff --git a/conf.py b/conf.py
index 87ec63a..b21add2 100644
--- a/conf.py
+++ b/conf.py
@@ -6,6 +6,10 @@
 import os, sys
 import subprocess
 
+on_rtd = os.environ.get("READTHEDOCS") == "True"
+
+
+
 # -- Generate doxygen xml prior to build --------------------------------------
 
 # Define the repository URL and target directory
@@ -42,27 +46,27 @@
 #
 subprocess.run(["doxygen", doxyfile], check=True)
 
-# Build pyEXP to populate Python API documenation
-#
-os.chdir('..')
+if not on rtd:
+    # Build pyEXP to populate Python API documenation
+    #
+    os.chdir('..')
 
-# Make build directory and begin
-#
-if not os.path.exists('build'):
-    subprocess.run(["mkdir", "build"], check=True)
-os.chdir('build')
-subprocess.run(['cmake', '-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev', '..'])
-subprocess.run(['make', '-j8'])
-
-# Return to top level
-#
-os.chdir(build_dir)
+    # Make build directory and begin
+    #
+    if not os.path.exists('build'):
+        subprocess.run(["mkdir", "build"], check=True)
+    os.chdir('build')
+    subprocess.run(['cmake', '-DCMAKE_BUILD_TYPE=Release -DENABLE_USER=NO -DENABLE_NBODY=NO -DEigen3_DIR=$EIGEN_BASE/share/eigen3/cmake -Wno-dev', '..'])
+    subprocess.run(['make', '-j8'])
 
+    # Return to top level
+    #
+    os.chdir(build_dir)
 
-# Add 'my_module_path' to the beginning of sys.path
-#
-my_module_path = os.path.join(build_dir, 'exp_repo/build/pyEXP')
-sys.path.insert(0, my_module_path)
+    # Add 'my_module_path' to the beginning of sys.path
+    #
+    my_module_path = os.path.join(build_dir, 'exp_repo/build/pyEXP')
+    sys.path.insert(0, my_module_path)
 
 # Begin Sphinx configuration
 
@@ -108,6 +112,11 @@
 html_logo = 'exp_logo_white.png'
 html_static_path = ['_static']
 
+# -- A readthedocs conditional  ----------------------------------------------
+def setup(app):
+    if os.environ.get('READTHEDOCS') == 'True':
+        app.add_tag('rtd')
+
 # -- Turn on figure numering -------------------------------------------------
 numfig = True
 
diff --git a/pybind11.rst b/pybind11.rst
index 52d04e3..36a8c0b 100644
--- a/pybind11.rst
+++ b/pybind11.rst
@@ -29,3 +29,11 @@ Index to pyEXP classes
 .. automodule:: pyEXP.util
    :members:
 
+.. only:: rtd
+
+.. note::
+
+   The Python API can not be generated in the _readthedocs_ environment.
+   You can find these webpages that include the full pyEXP API `on
+   GitHub Pages
+   <https://exp-code.github.io/EXP-docs/>`_.

From 253341280e4785b1b3a540558b61285ae1c03ae3 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 12:03:25 -0400
Subject: [PATCH 33/37] Another typo fix

---
 conf.py | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/conf.py b/conf.py
index b21add2..43fc892 100644
--- a/conf.py
+++ b/conf.py
@@ -9,7 +9,6 @@
 on_rtd = os.environ.get("READTHEDOCS") == "True"
 
 
-
 # -- Generate doxygen xml prior to build --------------------------------------
 
 # Define the repository URL and target directory
@@ -46,7 +45,7 @@
 #
 subprocess.run(["doxygen", doxyfile], check=True)
 
-if not on rtd:
+if not on_rtd:
     # Build pyEXP to populate Python API documenation
     #
     os.chdir('..')
@@ -114,7 +113,7 @@
 
 # -- A readthedocs conditional  ----------------------------------------------
 def setup(app):
-    if os.environ.get('READTHEDOCS') == 'True':
+    if on_rtd:
         app.add_tag('rtd')
 
 # -- Turn on figure numering -------------------------------------------------

From 54dee07ca3e448c5686e00bde8a591181cb002f6 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 12:22:55 -0400
Subject: [PATCH 34/37] Another try at tag logic

---
 .github/workflows/build_docs.yml | 6 +++---
 conf.py                          | 5 ++---
 pybind11.rst                     | 9 ++++-----
 3 files changed, 9 insertions(+), 11 deletions(-)

diff --git a/.github/workflows/build_docs.yml b/.github/workflows/build_docs.yml
index 0331197..aaec18b 100644
--- a/.github/workflows/build_docs.yml
+++ b/.github/workflows/build_docs.yml
@@ -1,9 +1,10 @@
-name: Build and Deploy Docs
+name: Build and Deploy Sphinx Docs
 
 on:
   push:
     branches:
-      - Doxygen  # Trigger on pushes to the main branch
+      - main                    # Trigger on pushes to the main branch
+      - Doxygen                 # Trigger on pushes to the devel branch
 
 jobs:
   build:
@@ -34,7 +35,6 @@ jobs:
           path: _build/html  # Path to your built documentation
       - name: Deploy to GitHub Pages
         uses: peaceiris/actions-gh-pages@v3
-#        if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/main' }}
         if: ${{ github.event_name == 'push' }}
         with:
           publish_branch: gh-pages
diff --git a/conf.py b/conf.py
index 43fc892..53356b8 100644
--- a/conf.py
+++ b/conf.py
@@ -112,9 +112,8 @@
 html_static_path = ['_static']
 
 # -- A readthedocs conditional  ----------------------------------------------
-def setup(app):
-    if on_rtd:
-        app.add_tag('rtd')
+if on_rtd:
+    tags.add('rtd')
 
 # -- Turn on figure numering -------------------------------------------------
 numfig = True
diff --git a/pybind11.rst b/pybind11.rst
index 36a8c0b..8116884 100644
--- a/pybind11.rst
+++ b/pybind11.rst
@@ -31,9 +31,8 @@ Index to pyEXP classes
 
 .. only:: rtd
 
-.. note::
+   .. note::
 
-   The Python API can not be generated in the _readthedocs_ environment.
-   You can find these webpages that include the full pyEXP API `on
-   GitHub Pages
-   <https://exp-code.github.io/EXP-docs/>`_.
+      The Python API can not be generated in the _readthedocs_
+      environment.  You can find these webpages that include the full
+      pyEXP API `on GitHub Pages <https://exp-code.github.io/EXP-docs/>`_.

From 425d64c634e84b092a182635e72ce19ead7bdecc Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 12:36:58 -0400
Subject: [PATCH 35/37] Change from note to warn

---
 pybind11.rst | 10 ++++++----
 1 file changed, 6 insertions(+), 4 deletions(-)

diff --git a/pybind11.rst b/pybind11.rst
index 8116884..17b4e65 100644
--- a/pybind11.rst
+++ b/pybind11.rst
@@ -31,8 +31,10 @@ Index to pyEXP classes
 
 .. only:: rtd
 
-   .. note::
+   .. warn::
 
-      The Python API can not be generated in the _readthedocs_
-      environment.  You can find these webpages that include the full
-      pyEXP API `on GitHub Pages <https://exp-code.github.io/EXP-docs/>`_.
+      The Python API documentation can not be generated in the
+      **ReadTheDocs** environment owing to memory and runtime
+      limitations.  You can find these webpages that include the full
+      pyEXP API `on GitHub Pages
+      <https://exp-code.github.io/EXP-docs/>`_.

From 921a24d3122cae2b8b9923007f7da7643eaaef70 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 12:48:35 -0400
Subject: [PATCH 36/37] Change from note to warning

---
 pybind11.rst | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/pybind11.rst b/pybind11.rst
index 17b4e65..7e007bb 100644
--- a/pybind11.rst
+++ b/pybind11.rst
@@ -31,8 +31,7 @@ Index to pyEXP classes
 
 .. only:: rtd
 
-   .. warn::
-
+   .. warning::
       The Python API documentation can not be generated in the
       **ReadTheDocs** environment owing to memory and runtime
       limitations.  You can find these webpages that include the full

From abaad5802299563cc57d373a7445bdcd1789c704 Mon Sep 17 00:00:00 2001
From: "Martin D. Weinberg" <weinberg@astro.umass.edu>
Date: Fri, 25 Jul 2025 13:02:30 -0400
Subject: [PATCH 37/37] One more time with indentation and line skips

---
 pybind11.rst | 1 +
 1 file changed, 1 insertion(+)

diff --git a/pybind11.rst b/pybind11.rst
index 7e007bb..1af283b 100644
--- a/pybind11.rst
+++ b/pybind11.rst
@@ -32,6 +32,7 @@ Index to pyEXP classes
 .. only:: rtd
 
    .. warning::
+
       The Python API documentation can not be generated in the
       **ReadTheDocs** environment owing to memory and runtime
       limitations.  You can find these webpages that include the full